Sed0025418.1 (mRNA) Chayote v1

Overview


Name	Sed0025418.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	SPARK domain-containing protein
Location	LG12: 31765964 .. 31768160 (-)
Sequence length	1268
RNA-Seq Expression	Sed0025418.1
Synteny	Sed0025418.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTCTCAAAACTATAAGAGAAAGAGCAACATTAGCATTCCCCATCCAATTCTCTCATTTTGCCTTTCCTTTTTTGCCCTTCTCCTTCATCTTCATCTTCAATTTCAATTTCCCCTAAAACCTCACTCTCTTCAACAATGTCTCCAATCCCACAAACCCTCCTTCTATTCTCTATTTTCCCCTCATTGTTCTCCCTTCCCCATCCAGACCCATTAGCAATCCACCCATTTCACGTAGCCCAGTCGCCGCCGGCGACTATTCCGGCGTTCCCAGAACAATCCGACGTCCAAGCCTGCCCACTTACCCTCCCCGAAGACCTCTTCCACGGCATCAAAACCGCTTGCGGTGGTTCTTCCGGGCAGCTCCACCGTAGCCGCTGCTGCCCGGCATTGGCCGCTTGGCTCTACGCCGCCTACTCCGCCGCCGCATTGCAGCGGGCCGGTGCCCGTCACACGGCCGCCGCCGCGTATGATCTACCACTTCTGCCGGACGATTCGGAAACTTGCGTCAGCAACTTGGATCAAGCTCTGAATCAAAGGGGAATTGAGCTTATGAAACCTAACGAGACTTGTGATGTTGTTTATTGCTACTGTGGTATTAGATTGCGCCCTTTGAGCTGCCCCGAATCGTTTTCGGCTAACCGGAATGGGGTTCTTGAAGGTGATGGGAATGTTGAGAGATTGGAGAGGAATTGCTTGAGTGGTGGCAATGGTAATGGATTTCCTGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTGAGCTTTTTTTTACACCATTGCTTTAGATTGGAGCTTGTTTGTGTTTTGTGTTTCATTTTATGATTTGGGGTTGTTCTGTTTCTGCATTTAAGGTTTATTAGAACATTGTAGGAATGTGCTGATCTGGTTAACTGTTTGCAATGGTCTTGATGAGAAATCTTTTGGGATTGTTTGTAATTGAAGGAAATATTGAATGGGAAAGCAAATTAAAACTGGAAATGGCTGGATAGTCTAATGGTCATGAGGGACTTAGAAATAAGTACGGAGTTTTTTTACGTACAAATAGTTAAGTTACGCAAATGCTGGCCTAGACACTCACAAATATTTTTTTATAGCAAAGATCCATGAGAAACTCAAGTTATCTTGATAAAGATCAAGCCTATATGACATGTGGCATTCTCTAATTGGCTGGTGAAGACTGTAGAACATATCATTCAACATGTGAATTCATTTGATGTTGATCAATCATGTATCATGTTTATAGTTCAAATTTATAGCTGTAAATGGTGGAAGAAAACAATATAAAAGACTTGGAGAGAATGAGTTGAAGTCAGGTTGACCACCTATTTCGGATTTATTATCATATTAGTTACTTTGGTTATCGACAAGTTATCTCGAAAGAATAGTTAAAATGTGTGCAAGCTGATCAAAATATTTACGAATATAAAAACAAGATTGTTTTCTTTCGTTTTTTATCAAAACAAAATAATAGAAAACAAGATTATTGACATTGGAAAGTTCAGTGTCAAATCAACCTATTAGCATTTGAACTGTTTTGGTTGTTTGTTTAGAACACTTCATATTATTTAGAATTTAGATCATTGTTGTTTGATTATATGTGGCTCCAACTAATTGAAATACTATAAACTATTGCACCAAACATATATCATTATGTATTTGATTATTAAGACATTAAAATAATGCAGCTCAACAACAAGGAAACTTTGAATTCAAGCAAGCCAGAGAATAGGACCACCAAGATGCACCAGGAAGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATCCACACCGTTACGTCGGTGCTTCAGGCTAAAATGATGAGCAAAGACGGGTCGGATCCTCAGTCGTGTACTATCAACAGTGACGGAATGCCTCTGGCTGTCGATTCGGCTGAGATCTCGGCCAGCTCTGTTTCAACTCCCATTCAGGCATCACTGTATCTTGGCCTGGTTTGGCTTGCTTTGTTGTATAATCTTATCATGTTGTTTTCTACACAATGAGGATAGAAGTGATTCCACTTAGAAATTTGTAACTGTGACTTTTTTGCTTTTTGTTTTTTCCTGTGTAGGGTTTCTGTGTATGGTGATTGTTGTTTTTTATTCATGAAGTTTCAAAAAATGGTCTTTGTTCTTGCAAAAAAGCAAAATTCTTTTTCTGATA

mRNA sequence

ATTTGTCTCAAAACTATAAGAGAAAGAGCAACATTAGCATTCCCCATCCAATTCTCTCATTTTGCCTTTCCTTTTTTGCCCTTCTCCTTCATCTTCATCTTCAATTTCAATTTCCCCTAAAACCTCACTCTCTTCAACAATGTCTCCAATCCCACAAACCCTCCTTCTATTCTCTATTTTCCCCTCATTGTTCTCCCTTCCCCATCCAGACCCATTAGCAATCCACCCATTTCACGTAGCCCAGTCGCCGCCGGCGACTATTCCGGCGTTCCCAGAACAATCCGACGTCCAAGCCTGCCCACTTACCCTCCCCGAAGACCTCTTCCACGGCATCAAAACCGCTTGCGGTGGTTCTTCCGGGCAGCTCCACCGTAGCCGCTGCTGCCCGGCATTGGCCGCTTGGCTCTACGCCGCCTACTCCGCCGCCGCATTGCAGCGGGCCGGTGCCCGTCACACGGCCGCCGCCGCGTATGATCTACCACTTCTGCCGGACGATTCGGAAACTTGCGTCAGCAACTTGGATCAAGCTCTGAATCAAAGGGGAATTGAGCTTATGAAACCTAACGAGACTTGTGATGTTGTTTATTGCTACTGTGGTATTAGATTGCGCCCTTTGAGCTGCCCCGAATCGTTTTCGGCTAACCGGAATGGGGTTCTTGAAGGTGATGGGAATGTTGAGAGATTGGAGAGGAATTGCTTGAGTGGTGGCAATGGTAATGGATTTCCTGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAACAAGGAAACTTTGAATTCAAGCAAGCCAGAGAATAGGACCACCAAGATGCACCAGGAAGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATCCACACCGTTACGTCGGTGCTTCAGGCTAAAATGATGAGCAAAGACGGGTCGGATCCTCAGTCGTGTACTATCAACAGTGACGGAATGCCTCTGGCTGTCGATTCGGCTGAGATCTCGGCCAGCTCTGTTTCAACTCCCATTCAGGCATCACTGTATCTTGGCCTGGTTTGGCTTGCTTTGTTGTATAATCTTATCATGTTGTTTTCTACACAATGAGGATAGAAGTGATTCCACTTAGAAATTTGTAACTGTGACTTTTTTGCTTTTTGTTTTTTCCTGTGTAGGGTTTCTGTGTATGGTGATTGTTGTTTTTTATTCATGAAGTTTCAAAAAATGGTCTTTGTTCTTGCAAAAAAGCAAAATTCTTTTTCTGATA

Coding sequence (CDS)

ATGTCTCCAATCCCACAAACCCTCCTTCTATTCTCTATTTTCCCCTCATTGTTCTCCCTTCCCCATCCAGACCCATTAGCAATCCACCCATTTCACGTAGCCCAGTCGCCGCCGGCGACTATTCCGGCGTTCCCAGAACAATCCGACGTCCAAGCCTGCCCACTTACCCTCCCCGAAGACCTCTTCCACGGCATCAAAACCGCTTGCGGTGGTTCTTCCGGGCAGCTCCACCGTAGCCGCTGCTGCCCGGCATTGGCCGCTTGGCTCTACGCCGCCTACTCCGCCGCCGCATTGCAGCGGGCCGGTGCCCGTCACACGGCCGCCGCCGCGTATGATCTACCACTTCTGCCGGACGATTCGGAAACTTGCGTCAGCAACTTGGATCAAGCTCTGAATCAAAGGGGAATTGAGCTTATGAAACCTAACGAGACTTGTGATGTTGTTTATTGCTACTGTGGTATTAGATTGCGCCCTTTGAGCTGCCCCGAATCGTTTTCGGCTAACCGGAATGGGGTTCTTGAAGGTGATGGGAATGTTGAGAGATTGGAGAGGAATTGCTTGAGTGGTGGCAATGGTAATGGATTTCCTGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAACAAGGAAACTTTGAATTCAAGCAAGCCAGAGAATAGGACCACCAAGATGCACCAGGAAGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATCCACACCGTTACGTCGGTGCTTCAGGCTAAAATGATGAGCAAAGACGGGTCGGATCCTCAGTCGTGTACTATCAACAGTGACGGAATGCCTCTGGCTGTCGATTCGGCTGAGATCTCGGCCAGCTCTGTTTCAACTCCCATTCAGGCATCACTGTATCTTGGCCTGGTTTGGCTTGCTTTGTTGTATAATCTTATCATGTTGTTTTCTACACAATGA

Protein sequence

MSPIPQTLLLFSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLTLPEDLFHGIKTACGGSSGQLHRSRCCPALAAWLYAAYSAAALQRAGARHTAAAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSANRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTTKMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSAEISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ

Homology

[Close]

BLAST of Sed0025418.1 vs. NCBI nr
Match: XP_023005177.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima])

HSP 1 Score: 542.3 bits (1396), Expect = 2.7e-150
Identity = 276/335 (82.39%), Postives = 294/335 (87.76%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLGFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHG+KTAC    GG SG+LHRSRCCP LAAWLYAAYSA ALQRAG     A HT 
Sbjct: 61  LPDELFHGVKTACGPSKGGVSGELHRSRCCPVLAAWLYAAYSATALQRAGRPGAAAGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSV 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT
Sbjct: 181 NQNGILEGDRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRT YIHT+TSVL+AKMMSKDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTGYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ 323
           EIS SSVSTPIQASL LGLVW  LLYN+IML ST+
Sbjct: 301 EISGSSVSTPIQASLNLGLVWAGLLYNMIMLVSTR 334

[Close]

BLAST of Sed0025418.1 vs. NCBI nr
Match: XP_022933713.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita moschata])

HSP 1 Score: 537.3 bits (1383), Expect = 8.8e-149
Identity = 274/335 (81.79%), Postives = 293/335 (87.46%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLGFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHG+KTAC    GG SG+LHRSRCCP LAAWLYAAYSA ALQRAG     A HT 
Sbjct: 61  LPDELFHGVKTACGPSKGGVSGELHRSRCCPVLAAWLYAAYSATALQRAGRPGAAAGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSV 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSK ENRTT
Sbjct: 181 NQNGILEGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKAENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYIHT+TSVL+AKMMSKDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ 323
           EIS SSVSTPIQASL LGLVW  LLYN++M  ST+
Sbjct: 301 EISGSSVSTPIQASLNLGLVWAGLLYNMMMWVSTR 334

[Close]

BLAST of Sed0025418.1 vs. NCBI nr
Match: KAG6587677.1 (putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537.3 bits (1383), Expect = 8.8e-149
Identity = 275/335 (82.09%), Postives = 293/335 (87.46%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLGFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAGARHTAAA--- 120
           LP++LFHG+KTAC    GG SG+LHRSRCCP LAAWLYAAYSA ALQRAG RH AAA   
Sbjct: 61  LPDELFHGVKTACGPSKGGVSGELHRSRCCPVLAAWLYAAYSATALQRAG-RHGAAAGHT 120

Query: 121 --AYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
             +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSC E+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCSEAFSV 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSK ENRTT
Sbjct: 181 NQNGILEGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKAENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYIHT+TSVL+AKMMSKDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ 323
           EIS SSVSTPIQASL LGLVW  LLYN+IM  ST+
Sbjct: 301 EISGSSVSTPIQASLNLGLVWAGLLYNMIMWVSTR 334

[Close]

BLAST of Sed0025418.1 vs. NCBI nr
Match: XP_038880109.1 (uncharacterized GPI-anchored protein At4g28100 [Benincasa hispida])

HSP 1 Score: 535.8 bits (1379), Expect = 2.6e-148
Identity = 275/334 (82.34%), Postives = 291/334 (87.13%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF + QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLVFSLFPSFFSLPHPDPLTIRPFQLNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHGIKTAC    GG SGQLHRSRCCP LAAWLYAAYSA ALQRAG       HT 
Sbjct: 61  LPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSL 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
            +NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT
Sbjct: 181 TQNGILEGDRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYI TVTSVL+AKMMS+DGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFST 322
           EIS SSVS PIQ  LYLGLVWLAL+YNLIML ST
Sbjct: 301 EISGSSVSIPIQTPLYLGLVWLALMYNLIMLVST 333

[Close]

BLAST of Sed0025418.1 vs. NCBI nr
Match: XP_023531799.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.4 bits (1378), Expect = 3.3e-148
Identity = 272/334 (81.44%), Postives = 291/334 (87.13%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLGFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAGARHTAAA--- 120
           LP++LFHG+KTAC    GG SG+LHRSRCCP LAAWLYAAYSA ALQRAG    AA    
Sbjct: 61  LPDELFHGVKTACGPSKGGVSGELHRSRCCPVLAAWLYAAYSATALQRAGRPGAAAGHTT 120

Query: 121 -AYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSAN 180
            +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS N
Sbjct: 121 PSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSVN 180

Query: 181 RNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTTK 240
           +NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLN+KETLNSSK ENRTTK
Sbjct: 181 QNGILEGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQLNDKETLNSSKAENRTTK 240

Query: 241 MHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSAE 300
           MH +ECQLMGLTWLLAKNRTAYIHT+TSVL+AKMMSKDGSDP+SCT+NSDGMPLAVDSAE
Sbjct: 241 MHHKECQLMGLTWLLAKNRTAYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSAE 300

Query: 301 ISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ 323
           IS SSVSTPIQASL LGLVW  LLYN+IM  ST+
Sbjct: 301 ISGSSVSTPIQASLNLGLVWAGLLYNMIMWVSTR 334

[Close]

BLAST of Sed0025418.1 vs. ExPASy Swiss-Prot
Match: Q9SUC9 (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-45
Identity = 119/297 (40.07%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 7   TLLLFSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLTLPEDLFHGIK 66
           TLL+  +   LFS    + L + P       P T+PAFP ++  Q+C L L  +LF G+ 
Sbjct: 6   TLLILLLCSLLFSTVLSN-LLVEPVQ-----PNTVPAFPVETQAQSCRLDLSNELFGGVN 65

Query: 67  TACGGSSGQLHRSRCCPALAAWLYAAYSAAALQ-RAGARHTAAAAYDLPLLPDDSETCVS 126
            ACG +   L RSRCCP LAAWL+AA++ +ALQ  A A    ++  D P+ PDDS+ CV+
Sbjct: 66  EACGRN---LDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVN 125

Query: 127 NLDQALNQRGIELMKPNETCDVVYCYCGIRLR---PLSCPESFSAN---RNGVLEGDGNV 186
            L  AL  + I++ +PN +CD + C+CGIRL     LSCP +F+ +   +N        V
Sbjct: 126 TLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNAT--PTAAV 185

Query: 187 ERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTTKMHQEECQLMGL 246
           + LE+ C +           GC++CL +L +L  +   N      R TKM  ++CQLMGL
Sbjct: 186 KNLEKECRNS-------SYSGCTRCLGALQKLKVRGG-NKKTTTERGTKMMSKDCQLMGL 245

Query: 247 TWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSAEISASSVST 297
           TWLLA+N+TAYI TV++VL+A M S        C+ + + MPLAVDS +   S  S+
Sbjct: 246 TWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQFQKSFSSS 283

[Close]

BLAST of Sed0025418.1 vs. ExPASy TrEMBL
Match: A0A6J1KSF1 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita maxima OX=3661 GN=LOC111498281 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150
Identity = 276/335 (82.39%), Postives = 294/335 (87.76%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLGFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHG+KTAC    GG SG+LHRSRCCP LAAWLYAAYSA ALQRAG     A HT 
Sbjct: 61  LPDELFHGVKTACGPSKGGVSGELHRSRCCPVLAAWLYAAYSATALQRAGRPGAAAGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSV 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT
Sbjct: 181 NQNGILEGDRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRT YIHT+TSVL+AKMMSKDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTGYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ 323
           EIS SSVSTPIQASL LGLVW  LLYN+IML ST+
Sbjct: 301 EISGSSVSTPIQASLNLGLVWAGLLYNMIMLVSTR 334

[Close]

BLAST of Sed0025418.1 vs. ExPASy TrEMBL
Match: A0A6J1F5L3 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita moschata OX=3662 GN=LOC111441048 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.3e-149
Identity = 274/335 (81.79%), Postives = 293/335 (87.46%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IP+  LL    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPRIFLLFSLGFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHG+KTAC    GG SG+LHRSRCCP LAAWLYAAYSA ALQRAG     A HT 
Sbjct: 61  LPDELFHGVKTACGPSKGGVSGELHRSRCCPVLAAWLYAAYSATALQRAGRPGAAAGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSV 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEGD NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSK ENRTT
Sbjct: 181 NQNGILEGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKAENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYIHT+TSVL+AKMMSKDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIHTITSVLRAKMMSKDGSDPKSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFSTQ 323
           EIS SSVSTPIQASL LGLVW  LLYN++M  ST+
Sbjct: 301 EISGSSVSTPIQASLNLGLVWAGLLYNMMMWVSTR 334

[Close]

BLAST of Sed0025418.1 vs. ExPASy TrEMBL
Match: A0A5D3DY25 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001150 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146
Identity = 270/334 (80.84%), Postives = 288/334 (86.23%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IPQ  L+    FS+FPS FSLPHPDPL I PF V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPQIFLIFSLVFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHGIKTAC    GG SGQLHRSRCCP LAAWLYAAYSA ALQRAG       HT 
Sbjct: 61  LPDELFHGIKTACGPSKGGISGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSL 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEG+ NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT
Sbjct: 181 NQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYI TVTSVL+AKMM++DGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMTEDGSDPRSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFST 322
           EIS SSV  P    LYLGLVW AL+YNLI+L ST
Sbjct: 301 EISGSSVPIPTHTLLYLGLVWAALMYNLILLVST 333

[Close]

BLAST of Sed0025418.1 vs. ExPASy TrEMBL
Match: A0A5A7UTR5 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004370 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146
Identity = 271/334 (81.14%), Postives = 287/334 (85.93%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IPQ  L+    FS+FPS FSLPHPDPL I P  V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPQIFLIFSLVFSLFPSFFSLPHPDPLTIRPLQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHGIKTAC    GG SGQLHRSRCCP LAAWLYAAYSA ALQRAG       HT 
Sbjct: 61  LPDELFHGIKTACGPSKGGISGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSL 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEG+ NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT
Sbjct: 181 NQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYI TVTSVL+AKMM KDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMRKDGSDPRSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFST 322
           EIS+SSV  P    LYLGLVW AL+YNLIML ST
Sbjct: 301 EISSSSVPIPTHTLLYLGLVWAALMYNLIMLVST 333

[Close]

BLAST of Sed0025418.1 vs. ExPASy TrEMBL
Match: A0A1S3BWB4 (uncharacterized GPI-anchored protein At4g28100 OS=Cucumis melo OX=3656 GN=LOC103494171 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.4e-146
Identity = 271/334 (81.14%), Postives = 287/334 (85.93%), Query Frame = 0


Query: 1   MSPIPQTLLL----FSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLT 60
           MS IPQ  L+    FS+FPS FSLPHPDPL I P  V QSPPATIPAFPEQSDVQ CPL 
Sbjct: 1   MSSIPQIFLIFSLVFSLFPSFFSLPHPDPLTIRPLQVNQSPPATIPAFPEQSDVQGCPLD 60

Query: 61  LPEDLFHGIKTAC----GGSSGQLHRSRCCPALAAWLYAAYSAAALQRAG-----ARHTA 120
           LP++LFHGIKTAC    GG SGQLHRSRCCP LAAWLYAAYSA ALQRAG       HT 
Sbjct: 61  LPDELFHGIKTACGPSKGGISGQLHRSRCCPVLAAWLYAAYSATALQRAGRGGVVPGHT- 120

Query: 121 AAAYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSA 180
           A +YDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRL PLSCPE+FS 
Sbjct: 121 APSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSL 180

Query: 181 NRNGVLEGDGNVERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240
           N+NG+LEG+ NV+RLERNCLS GN NGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT
Sbjct: 181 NQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 240

Query: 241 KMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSA 300
           KMH +ECQLMGLTWLLAKNRTAYI TVTSVL+AKMM KDGSDP+SCT+NSDGMPLAVDSA
Sbjct: 241 KMHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMRKDGSDPRSCTLNSDGMPLAVDSA 300

Query: 301 EISASSVSTPIQASLYLGLVWLALLYNLIMLFST 322
           EIS+SSV  P    LYLGLVW AL+YNLIML ST
Sbjct: 301 EISSSSVPIPTHTLLYLGLVWAALMYNLIMLVST 333

[Close]

BLAST of Sed0025418.1 vs. TAIR 10
Match: AT3G18050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 331.6 bits (849), Expect = 6.8e-91
Identity = 186/333 (55.86%), Postives = 231/333 (69.37%), Query Frame = 0


Query: 2   SPIPQTLLLFSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLTLPEDL 61
           +P   +L++  +F ++ S   P+P+ + PF V  SPPATIPAFPEQSD   CPL LPEDL
Sbjct: 5   APSSISLIIIFLF-TILSPVSPEPVTVQPFRVKSSPPATIPAFPEQSDFSGCPLDLPEDL 64

Query: 62  FHGIKTACGGSSGQLHRSRCCPALAAWLYAAYSAAALQR---AGARHTAAAA-------Y 121
           FHGIK+AC G   +LH+ +CCP L AWLY+AYS  AL R   A AR++++++        
Sbjct: 65  FHGIKSACSGK--KLHKGKCCPVLGAWLYSAYSTTALSRSISAAARNSSSSSAAVTTPEE 124

Query: 122 DLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLRPLSCPESFSANRNG 181
           D+PLLPDDSETCV  L ++L QRGIEL +PNETCDVVYCYCGIRL PLSC E+F  N  G
Sbjct: 125 DMPLLPDDSETCVDGLGKSLRQRGIELTRPNETCDVVYCYCGIRLHPLSCSEAFRVNDEG 184

Query: 182 VLEGDGNVERLERNCLSG--GNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKP----ENR 241
            L GD  V+RLE +CLSG   N +GF  L GC+KCL SLY+LN K+T  +  P     NR
Sbjct: 185 RLVGDERVDRLETDCLSGSHNNADGFSPLLGCNKCLNSLYKLNPKKTSGTRNPSKEDRNR 244

Query: 242 TTKMHQEECQLMGLTWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVD 301
           T KMH ++C LMGLTWLLAKNRTAY  TVTSVL+A M++ DG  P+SC + SDGMPLAVD
Sbjct: 245 TAKMHNKDCVLMGLTWLLAKNRTAYFPTVTSVLRAVMLNHDGV-PRSCALGSDGMPLAVD 304

Query: 302 SAEISASSVSTPIQASLYLGLVWLALLYNLIML 319
           S+E S  S  T +Q   +L      LLY++I L
Sbjct: 305 SSEFSNGS-PTSLQYPHHLVHF---LLYSVITL 329

[Close]

BLAST of Sed0025418.1 vs. TAIR 10
Match: AT4G28100.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-46
Identity = 119/297 (40.07%), Postives = 170/297 (57.24%), Query Frame = 0


Query: 7   TLLLFSIFPSLFSLPHPDPLAIHPFHVAQSPPATIPAFPEQSDVQACPLTLPEDLFHGIK 66
           TLL+  +   LFS    + L + P       P T+PAFP ++  Q+C L L  +LF G+ 
Sbjct: 6   TLLILLLCSLLFSTVLSN-LLVEPVQ-----PNTVPAFPVETQAQSCRLDLSNELFGGVN 65

Query: 67  TACGGSSGQLHRSRCCPALAAWLYAAYSAAALQ-RAGARHTAAAAYDLPLLPDDSETCVS 126
            ACG +   L RSRCCP LAAWL+AA++ +ALQ  A A    ++  D P+ PDDS+ CV+
Sbjct: 66  EACGRN---LDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVN 125

Query: 127 NLDQALNQRGIELMKPNETCDVVYCYCGIRLR---PLSCPESFSAN---RNGVLEGDGNV 186
            L  AL  + I++ +PN +CD + C+CGIRL     LSCP +F+ +   +N        V
Sbjct: 126 TLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNAT--PTAAV 185

Query: 187 ERLERNCLSGGNGNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTTKMHQEECQLMGL 246
           + LE+ C +           GC++CL +L +L  +   N      R TKM  ++CQLMGL
Sbjct: 186 KNLEKECRNS-------SYSGCTRCLGALQKLKVRGG-NKKTTTERGTKMMSKDCQLMGL 245

Query: 247 TWLLAKNRTAYIHTVTSVLQAKMMSKDGSDPQSCTINSDGMPLAVDSAEISASSVST 297
           TWLLA+N+TAYI TV++VL+A M S        C+ + + MPLAVDS +   S  S+
Sbjct: 246 TWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSPDQENMPLAVDSLQFQKSFSSS 283

The following BLAST results are available for this feature:

BLAST of Sed0025418.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005177.1	2.7e-150	82.39	uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima]	[more]
XP_022933713.1	8.8e-149	81.79	uncharacterized GPI-anchored protein At4g28100-like [Cucurbita moschata]	[more]
KAG6587677.1	8.8e-149	82.09	putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038880109.1	2.6e-148	82.34	uncharacterized GPI-anchored protein At4g28100 [Benincasa hispida]	[more]
XP_023531799.1	3.3e-148	81.44	uncharacterized GPI-anchored protein At4g28100-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0025418.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUC9	1.9e-45	40.07	Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Sed0025418.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSF1	1.3e-150	82.39	uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1F5L3	4.3e-149	81.79	uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita moschata OX=366...	[more]
A0A5D3DY25	3.4e-146	80.84	Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UTR5	3.4e-146	81.14	Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BWB4	3.4e-146	81.14	uncharacterized GPI-anchored protein At4g28100 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Sed0025418.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18050.1	6.8e-91	55.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28100.1	1.3e-46	40.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043891	SPARK domain	PFAM	PF19160	SPARK	coord: 51..235 e-value: 7.3E-12 score: 46.0
None	No IPR available	PANTHER	PTHR34056:SF6	PROTEIN, PUTATIVE-RELATED	coord: 2..316
IPR040376	At4g28100-like	PANTHER	PTHR34056	GPI-ANCHORED PROTEIN	coord: 2..316

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0025418	Sed0025418	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025418.1-exon	Sed0025418.1-exon-LG12:31765964..31766462	exon
Sed0025418.1-exon	Sed0025418.1-exon-LG12:31767392..31768160	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025418.1-three_prime_utr	Sed0025418.1-three_prime_utr-LG12:31765964..31766123	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025418.1-cds	Sed0025418.1-cds-LG12:31766124..31766462	CDS
Sed0025418.1-cds	Sed0025418.1-cds-LG12:31767392..31768021	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025418.1-five_prime_utr	Sed0025418.1-five_prime_utr-LG12:31768022..31768160	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0025418.1	Sed0025418.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity