Sed0025390.1 (mRNA) Chayote v1

Overview


Name	Sed0025390.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Phytocyanin domain-containing protein
Location	LG05: 4430393 .. 4431962 (+)
Sequence length	537
RNA-Seq Expression	Sed0025390.1
Synteny	Sed0025390.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAACATATTTGGATTAGTGTTTTAATTTTGATTGGAGTGCTTGCATTAAGATGCAATGCCACAACATACATTGTAGGAGATACTTCTGGTTGGGATATCAGCACTGATCTTGATACTTGGTCTCAAGGCAAGAAGTTTTATGTTGGAGATGTTCTTGGTATTATTTCTCTATTTCTATTCATCTACTTTTAATTTTGGCTAAATATTTCTTTTAAAAGTTTAAGTTGAGTTTCACCGAATGGGTCGGTGGTGTTAATCCATTTTTACTACAGAGTCTCGGGGTTGATCCATGTCATCGGTATTTGTAATCTCCTTCCTCCAATTCATACTAAAAAAGAGAGATTCATACTTTTTGTACCGTTAATTAAGGATATAAATCTAAATTAATCGAGCTCTACTTAAAATTATATCACTAAATGTCAAAGGAATGATGATTTTTTTTCTCAATTAAAATGAGAAGTGATTTTCAATTTAGAGTGAGAAGTGATTTTCAACTTAGAGATACTTCTTTTCATGCATGTTTTGAATCCAAAATATAAAGTTTAATATGTATTTTTGTTTATGATAACAGATTATTTAATGATTTGATTAAGAGTCAGTGTATGATATGAGTAGATTTTAAATCTTGTAGGTGTATGTATGTTTATTTATTTAAATTAAACATATATCATATTTTCAAGGAAAAGAATTGTGTTTTTGTCAATTCAATTCACATAATATTCTATCAATAAATTTGATTATTTTGTGATCCTAAGATTTGGATTGGAAAAAGATAGCTTTATCAAAGAAAAAAAACATATGGATTGTAAATAGTTCATTTAATTAGTTTGTCCATTTTATTTTTTTTAGTACAATTATGGTAAGGAACTAACAAAGTCTATAAACAAGAACTACTACCTTCAAATAATAGGAGAATCAAATACCGATTTTCAATATTAAACTCATGACCATGAAATTGAAATAGATTTATCATTAAAAAAAAAAATCAACCAGCCACCAACAGAACCTTATGTATCCATACCTTATATCACATTTATATATTTCACATCAATCCTTTAACCCAAAAAACTCGATAAAGTGATTGAATTGATTTTTTTAATTGTACATGATCAAAATTAAGGGATTGTAAACTCAATATACAAATAAACAATATTTAGTCGTTTTCTAAAATGTAATATCTCAATGTATAGTATTTCAATACTCATCATCGGAGAGCTTAAGCGAAGTAACGAGAGAGAATTTCAAGACGTGCAACACCACCAACGTTCTGAAAGCCTATTCCACCGGAAACACCACCGTCACCCTGTCGGAGCCCGGCCACAGATTCTTCATTTCCGGCAACCGCCTGCTCTGTCTCAGCGGCATGAAGCTGCTAGTCAATGTCGAGAACAACCAATCTTTATCGCCCGCCGCCGCTCCTCAGCCGCCCAACGGCCTCCCTCCGCCCTCTTCCAAAACTGGCGACAACGGCGTTCCGAGCGCCGCCGCCGTGGTCGCTGGAAAACAAGGCCTTGTGATTGTCTTTGTTTGTTATGTCATTTCTTCGGCCATGATGGTGTTTTGA

mRNA sequence

ATGGGAAAACATATTTGGATTAGTGTTTTAATTTTGATTGGAGTGCTTGCATTAAGATGCAATGCCACAACATACATTGTAGGAGATACTTCTGGTTGGGATATCAGCACTGATCTTGATACTTGGTCTCAAGGCAAGAAGTTTTATGTTGGAGATGTTCTTGTATTTCAATACTCATCATCGGAGAGCTTAAGCGAAGTAACGAGAGAGAATTTCAAGACGTGCAACACCACCAACGTTCTGAAAGCCTATTCCACCGGAAACACCACCGTCACCCTGTCGGAGCCCGGCCACAGATTCTTCATTTCCGGCAACCGCCTGCTCTGTCTCAGCGGCATGAAGCTGCTAGTCAATGTCGAGAACAACCAATCTTTATCGCCCGCCGCCGCTCCTCAGCCGCCCAACGGCCTCCCTCCGCCCTCTTCCAAAACTGGCGACAACGGCGTTCCGAGCGCCGCCGCCGTGGTCGCTGGAAAACAAGGCCTTGTGATTGTCTTTGTTTGTTATGTCATTTCTTCGGCCATGATGGTGTTTTGA

Coding sequence (CDS)

ATGGGAAAACATATTTGGATTAGTGTTTTAATTTTGATTGGAGTGCTTGCATTAAGATGCAATGCCACAACATACATTGTAGGAGATACTTCTGGTTGGGATATCAGCACTGATCTTGATACTTGGTCTCAAGGCAAGAAGTTTTATGTTGGAGATGTTCTTGTATTTCAATACTCATCATCGGAGAGCTTAAGCGAAGTAACGAGAGAGAATTTCAAGACGTGCAACACCACCAACGTTCTGAAAGCCTATTCCACCGGAAACACCACCGTCACCCTGTCGGAGCCCGGCCACAGATTCTTCATTTCCGGCAACCGCCTGCTCTGTCTCAGCGGCATGAAGCTGCTAGTCAATGTCGAGAACAACCAATCTTTATCGCCCGCCGCCGCTCCTCAGCCGCCCAACGGCCTCCCTCCGCCCTCTTCCAAAACTGGCGACAACGGCGTTCCGAGCGCCGCCGCCGTGGTCGCTGGAAAACAAGGCCTTGTGATTGTCTTTGTTTGTTATGTCATTTCTTCGGCCATGATGGTGTTTTGA

Protein sequence

MGKHIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQSLSPAAAPQPPNGLPPPSSKTGDNGVPSAAAVVAGKQGLVIVFVCYVISSAMMVF

Homology

[Close]

BLAST of Sed0025390.1 vs. NCBI nr
Match: XP_038877141.1 (stellacyanin-like [Benincasa hispida])

HSP 1 Score: 268.9 bits (686), Expect = 3.2e-68
Identity = 138/180 (76.67%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 4   HIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSES 63
           +IW+ VL++IG  ALRCNATTYIVGDTSGWDISTDLDTWSQGK+F+VGDVLVFQYSSS S
Sbjct: 5   NIWVMVLVVIGGFALRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSAS 64

Query: 64  LSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQ 123
           L+EVTRENF TCNTTNVLKAYS+GNTT+TLS+PG RFF+S NRLLCL GMKL VNVENNQ
Sbjct: 65  LNEVTRENFNTCNTTNVLKAYSSGNTTITLSQPGQRFFVSANRLLCLGGMKLQVNVENNQ 124

Query: 124 SLSPAAAPQPP---NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAMMVF 179
           S SPA APQPP   + LP PSSKT +NGVPSA+A  V+ GK+ L IVFVCYVIS++ +VF
Sbjct: 125 SFSPATAPQPPTQSDTLPRPSSKTDNNGVPSASASFVIGGKEALAIVFVCYVISTSFIVF 184

[Close]

BLAST of Sed0025390.1 vs. NCBI nr
Match: XP_023549499.1 (stellacyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 5.5e-68
Identity = 137/181 (75.69%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MGKHIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSS 60
           M K+IW+ VL++IG LAL CNATTYIVGDTSGWDISTDLD WSQGK+FYVGDVLVFQYSS
Sbjct: 5   MAKNIWVYVLVIIGGLALSCNATTYIVGDTSGWDISTDLDAWSQGKRFYVGDVLVFQYSS 64

Query: 61  SESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVE 120
           S+SL+EVTREN+ TCNTTNVLKAY+ GNTTVTLS+PG RFF+SGNRLLCL GMK+ VNVE
Sbjct: 65  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 124

Query: 121 NNQSLSPAAAPQPP---NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAM 177
           NNQS SPAAAPQPP   NGLP PSSKT ++GVPS +   V+ GK+ L IVF CYVIS A 
Sbjct: 125 NNQSFSPAAAPQPPPQSNGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 184

[Close]

BLAST of Sed0025390.1 vs. NCBI nr
Match: XP_011654854.1 (blue copper protein [Cucumis sativus] >KGN50322.1 hypothetical protein Csa_000514 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 136/181 (75.14%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 4   HIWISVLILI-GVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSE 63
           +IW+ VL++I G   +RCNATTYIVGDTSGWDISTDLDTWSQGK+F+VGDVLVFQYSS  
Sbjct: 7   NIWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSLA 66

Query: 64  SLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENN 123
           SL+EVTRENF +CNTTNVLKAYS+GNTTVTLSEPGHRFF+SGNRLLCL GMKL VNVENN
Sbjct: 67  SLNEVTRENFNSCNTTNVLKAYSSGNTTVTLSEPGHRFFVSGNRLLCLGGMKLQVNVENN 126

Query: 124 QSLSPAAAPQPP----NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAMM 178
           QS SPAAAPQPP    + LP PSSKT +N VPSAAA  V+ G QGL  +FVCYVIS+   
Sbjct: 127 QSFSPAAAPQPPSSQSDALPRPSSKTDNNSVPSAAAGVVIGGNQGLAFLFVCYVISTLSF 186

[Close]

BLAST of Sed0025390.1 vs. NCBI nr
Match: XP_022969745.1 (stellacyanin [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 132/182 (72.53%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MGKHIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSS 60
           M  +IW+ VL++IG LAL CNA TYIVGDTSGWDISTDLDTWSQGK+FYVGDVLVFQYSS
Sbjct: 3   MANNIWVYVLVIIGGLALSCNAATYIVGDTSGWDISTDLDTWSQGKRFYVGDVLVFQYSS 62

Query: 61  SESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVE 120
           S+SL+EVTREN+ TCNTT VLKAY+ GNTTVTLS+PG RFF+SGNRLLCL GMK+ VNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTKVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSLSPAAAPQPP---NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAM 178
           NNQS SPAAAPQPP   +GLP PSSKT ++G+PS +   V+ GK+ L IV  CYVIS A 
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGIPSGSTRHVIGGKEALGIVLACYVISLAF 182

[Close]

BLAST of Sed0025390.1 vs. NCBI nr
Match: KAG6579635.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.1 bits (658), Expect = 5.7e-65
Identity = 134/181 (74.03%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 1   MGKHIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSS 60
           M K+I + VL++IG LAL CNA TYIVGDTSGWDISTDLD+WSQGK+FYVGDVLVFQYSS
Sbjct: 5   MAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYVGDVLVFQYSS 64

Query: 61  SESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVE 120
           S+SL+EVTREN+ TCNTTNVLKAY+ GNTTVTLS+PG RFF+SGNRLLCL GMK+ VNVE
Sbjct: 65  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 124

Query: 121 NNQSLSPAAAPQPP---NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAM 177
           NNQS SPAAAPQPP   N LP PSSKT ++GVPS +   V+ GK+ L IVF CYVIS A 
Sbjct: 125 NNQSFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 184

[Close]

BLAST of Sed0025390.1 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-15
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 9   VLILIGVLALR----CNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSS-ES 68
           +LI+I VLA        AT + +G  SGW +   L TW+ G+ F VGD LVF Y ++   
Sbjct: 6   MLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHD 65

Query: 69  LSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQ 128
           + EVT+  F +C     L  ++ GN+ V L+ PG R+FI G    C  GMKL VNV    
Sbjct: 66  VVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTA 125

Query: 129 SLSPAAA---PQPPNGLPPPSS 143
           +++P A      P    P PSS
Sbjct: 126 TVAPTAPLPNTVPSLNAPSPSS 147

[Close]

BLAST of Sed0025390.1 vs. ExPASy Swiss-Prot
Match: Q8LC95 (Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-12
Identity = 56/168 (33.33%), Postives = 82/168 (48.81%), Query Frame = 0


Query: 10  LILIGVLALRCNATTYIVGDTSGWDI----STDLDTWSQGKKFYVGDVLVFQY-SSSESL 69
           LI   +  L C+    + G TS W I    S  L+ W++  +F VGD LV++Y    +S+
Sbjct: 12  LIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSV 71

Query: 70  SEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQ- 129
            +VT++ +  CNTTN    YS G+T V L   G  FFISG++  C+ G KL + V +++ 
Sbjct: 72  LQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSRG 131

Query: 130 --------SLSPAAAPQPPNGLPPPSSKTGDNGVPSAAAVVAGKQGLV 164
                     SP+ AP P   L  P+      G  S+     G  G V
Sbjct: 132 GHTGGFFTGSSPSPAPSPAL-LGAPTVAPASGGSASSLTRQVGVLGFV 178

[Close]

BLAST of Sed0025390.1 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 7.6e-12
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 7   ISVLILIGVLALRCNATTYIVGDTSGWDI----STDLDTWSQGKKFYVGDVLVFQY-SSS 66
           +++  LI + +L       + G +  W I    S     W+Q  +F VGD +VF+Y S  
Sbjct: 14  VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73

Query: 67  ESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKL-LVNVE 126
           +S+ EVT+E + +CNTTN L  Y+ G T V L   G  +FISG    C  G KL LV + 
Sbjct: 74  DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 133

Query: 127 NNQS-LSPAAAP 132
              S +SPA +P
Sbjct: 134 PRHSVISPAPSP 145

[Close]

BLAST of Sed0025390.1 vs. ExPASy Swiss-Prot
Match: Q02917 (Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 0


Query: 9   VLILIGVLALRCNATTYIVGDT-SGWDI----STDLDTWSQGKKFYVGDVLVFQYSS-SE 68
           V++ + +L     A  Y+VG +   W         L  W+   +F +GD L+F+Y   +E
Sbjct: 13  VMLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTE 72

Query: 69  SLSEVTRENFKTCNTTNVLK-AYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLV---- 128
           S+ E    +++ CNT       ++ GNT V L++PG R FISGN+  C  G+KL V    
Sbjct: 73  SVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVIS 132

Query: 129 -NVENNQSLSPAAAPQPPNG---LPPPSSKTGDNGVPSAA 154
            N      LSP+ +P PP      P PS    + GV S++
Sbjct: 133 SNKTKKNLLSPSPSPSPPPSSLLSPSPSPLPNNQGVTSSS 172

[Close]

BLAST of Sed0025390.1 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 23  TTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSS-ESLSEVTRENFKTCNTTNVL 82
           T Y VGD  GW I  D   W++GK F VGD LVF+Y+    ++ +V +  F+ C      
Sbjct: 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPS 175

Query: 83  KAYSTGNTTVTLSEPGHRFFISGNRLLCLS-GMKLLVNVENNQSLSPAA-APQPPNGLP 139
           +  ++G+  +TL+ PG +++I G    C     KL + VE   + +P   AP P  G P
Sbjct: 176 EGLTSGHDVITLAAPGKKWYICGFPTHCSEHKQKLAITVEGAPAQTPPVWAPAPAPGTP 234

[Close]

BLAST of Sed0025390.1 vs. ExPASy TrEMBL
Match: A0A0A0KPG5 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167140 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.6e-66
Identity = 136/181 (75.14%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 4   HIWISVLILI-GVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSE 63
           +IW+ VL++I G   +RCNATTYIVGDTSGWDISTDLDTWSQGK+F+VGDVLVFQYSS  
Sbjct: 7   NIWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSLA 66

Query: 64  SLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENN 123
           SL+EVTRENF +CNTTNVLKAYS+GNTTVTLSEPGHRFF+SGNRLLCL GMKL VNVENN
Sbjct: 67  SLNEVTRENFNSCNTTNVLKAYSSGNTTVTLSEPGHRFFVSGNRLLCLGGMKLQVNVENN 126

Query: 124 QSLSPAAAPQPP----NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAMM 178
           QS SPAAAPQPP    + LP PSSKT +N VPSAAA  V+ G QGL  +FVCYVIS+   
Sbjct: 127 QSFSPAAAPQPPSSQSDALPRPSSKTDNNSVPSAAAGVVIGGNQGLAFLFVCYVISTLSF 186

[Close]

BLAST of Sed0025390.1 vs. ExPASy TrEMBL
Match: A0A6J1I0T8 (stellacyanin OS=Cucurbita maxima OX=3661 GN=LOC111468850 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.3e-66
Identity = 132/182 (72.53%), Postives = 153/182 (84.07%), Query Frame = 0


Query: 1   MGKHIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSS 60
           M  +IW+ VL++IG LAL CNA TYIVGDTSGWDISTDLDTWSQGK+FYVGDVLVFQYSS
Sbjct: 3   MANNIWVYVLVIIGGLALSCNAATYIVGDTSGWDISTDLDTWSQGKRFYVGDVLVFQYSS 62

Query: 61  SESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVE 120
           S+SL+EVTREN+ TCNTT VLKAY+ GNTTVTLS+PG RFF+SGNRLLCL GMK+ VNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTKVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSLSPAAAPQPP---NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAM 178
           NNQS SPAAAPQPP   +GLP PSSKT ++G+PS +   V+ GK+ L IV  CYVIS A 
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGIPSGSTRHVIGGKEALGIVLACYVISLAF 182

[Close]

BLAST of Sed0025390.1 vs. ExPASy TrEMBL
Match: A0A6J1ERB5 (stellacyanin OS=Cucurbita moschata OX=3662 GN=LOC111435827 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.1e-65
Identity = 133/181 (73.48%), Postives = 153/181 (84.53%), Query Frame = 0


Query: 1   MGKHIWISVLILIGVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSS 60
           M K+I +  L++IG LAL CNA TYIVGDTSGWDISTDLD+WSQGK+FYVGDVLVFQYSS
Sbjct: 3   MAKNIRVYALMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYVGDVLVFQYSS 62

Query: 61  SESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVE 120
           S+SL+EVTREN+ TCNTTNVLKAY+ GNTTVTLS+PG RFF+SGNRLLCL GMK+ VNVE
Sbjct: 63  SQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 122

Query: 121 NNQSLSPAAAPQPP---NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISSAM 177
           NNQS SPAAAPQPP   +GLP PSSKT ++GVPS +   V+ GK+ L IVF CYVIS A 
Sbjct: 123 NNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAF 182

[Close]

BLAST of Sed0025390.1 vs. ExPASy TrEMBL
Match: A0A1S3AT20 (stellacyanin OS=Cucumis melo OX=3656 GN=LOC103482542 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 132/176 (75.00%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 6   WISVLILI-GVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSESL 65
           W+ VL++I G   +RCNATTYIVGDTSGWDISTDLDTWSQGK+F+VGDVLVFQYSSS SL
Sbjct: 10  WVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSASL 69

Query: 66  SEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQS 125
           +EVTRENF TCNTTNVLKAYS+GNTTVTLS+PG RFF+SGNRLLCL GMKL VNVENNQS
Sbjct: 70  NEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENNQS 129

Query: 126 LSPAAAPQPP-----NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISS 174
            SPAAAPQPP     + LP PSSKT +N VP+ AA  V+ GKQ   I+FVC VIS+
Sbjct: 130 FSPAAAPQPPPSSHSDDLPRPSSKTDNNSVPNTAAGFVMEGKQARAILFVCCVIST 185

[Close]

BLAST of Sed0025390.1 vs. ExPASy TrEMBL
Match: A0A5A7UGX7 (Stellacyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00080 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.9e-62
Identity = 132/176 (75.00%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 6   WISVLILI-GVLALRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSESL 65
           W+ VL++I G   +RCNATTYIVGDTSGWDISTDLDTWSQGK+F+VGDVLVFQYSSS SL
Sbjct: 10  WVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSASL 69

Query: 66  SEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQS 125
           +EVTRENF TCNTTNVLKAYS+GNTTVTLS+PG RFF SGNRLLCL GMKL VNVENNQS
Sbjct: 70  NEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFASGNRLLCLGGMKLQVNVENNQS 129

Query: 126 LSPAAAPQPP-----NGLPPPSSKTGDNGVPSAAA--VVAGKQGLVIVFVCYVISS 174
            SPAAAPQPP     + LP PSSKT +N VP+ AA  V+ GKQ   I+FVC VIS+
Sbjct: 130 FSPAAAPQPPPSSHSDDLPQPSSKTDNNSVPNTAAGFVMEGKQARAILFVCCVIST 185

[Close]

BLAST of Sed0025390.1 vs. TAIR 10
Match: AT5G07475.1 (Cupredoxin superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 2.6e-39
Identity = 86/172 (50.00%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 8   SVLILIGVLAL-RCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSESLSE 67
           ++ I+ GV+ + RCNATTY VGD+SGWDIS+DL++W+ GK+F  GDVL+FQYSS+ S+ E
Sbjct: 12  NLCIIFGVVVIRRCNATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYSSTHSVYE 71

Query: 68  VTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVE-NNQSL 127
           V ++N++ CNTT+ ++ ++ GNTTV LS+PG+RFF+ GNRL C +GM+LLVNVE N  S 
Sbjct: 72  VAKDNYQNCNTTDAIRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNVEGNGPSQ 131

Query: 128 SPAAAPQ-PPNGLPPPSSKTGD--NGVPSAAAVVAGK---QGLVIVFVCYVI 172
           +P  +PQ   +G+  PSSK  +   GV S+AA   G    +G + +FV +++
Sbjct: 132 APVGSPQAATSGILQPSSKKNNPATGVASSAARFVGDSGWRGTMGIFVYFMV 183

[Close]

BLAST of Sed0025390.1 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 18  LRCNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSE-SLSEVTRENFKTCN 77
           L+   T +IVGD++GW++ T+   W+QG++F+VGDVLVF Y S + ++ +V    +  C 
Sbjct: 2   LKSEGTEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCG 61

Query: 78  TTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNV 120
             N    ++ GN ++ LSE G  +FI G    C++G KL +NV
Sbjct: 62  LDNYTTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104

[Close]

BLAST of Sed0025390.1 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-16
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 9   VLILIGVLALR----CNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSS-ES 68
           +LI+I VLA        AT + +G  SGW +   L TW+ G+ F VGD LVF Y ++   
Sbjct: 6   MLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHD 65

Query: 69  LSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQ 128
           + EVT+  F +C     L  ++ GN+ V L+ PG R+FI G    C  GMKL VNV    
Sbjct: 66  VVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTA 125

Query: 129 SLSPAAA---PQPPNGLPPPSS 143
           +++P A      P    P PSS
Sbjct: 126 TVAPTAPLPNTVPSLNAPSPSS 147

[Close]

BLAST of Sed0025390.1 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 8.9e-16
Identity = 55/182 (30.22%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 5   IWISVLILIGVLALRCNATTYIVGDTSGWDISTDLD--TWSQGKKFYVGDVLVFQYSSS- 64
           I ++ L  I V+     A  Y VGD++GW    ++D   W+  K F++GD ++F+Y+   
Sbjct: 4   IIVAALACIVVMLRLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYNPQF 63

Query: 65  ESLSEVTRENFKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVEN 124
            ++  VT   +++CNT+  +  ++TGN ++TL+  GH FF  G    CL+G KL ++V  
Sbjct: 64  HNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVLL 123

Query: 125 NQSLSPAAAPQPPNGLPPPSSKTGDNGVPS-----AAAVVAGKQGLVIVFVCYVISSAMM 179
             S +P + P   +   PPS+     GVP      AA++ +     ++  V  ++S A  
Sbjct: 124 PASSTPLSDPPTSSSSSPPSTTIPAAGVPGPSPSLAASLPSMVTAQIVAVVTLLVSLAFT 183

[Close]

BLAST of Sed0025390.1 vs. TAIR 10
Match: AT3G27200.1 (Cupredoxin superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 4.4e-15
Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 9   VLILIGVLALR-CNATTYIVGDTSGWDISTDLDTWSQGKKFYVGDVLVFQYSSSESLSEV 68
           +L+  G+L+++   A  +++G + GW+ S D D+WS  + F VGD +VF+YS   S+ E+
Sbjct: 9   ILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELHSVVEL 68

Query: 69  TREN-FKTCNTTNVLKAYSTGNTTVTLSEPGHRFFISGNRLLCLSGMKLLVNVENNQSLS 128
             E  +K+C+    + + S+GN  V LS+ G R+F  G    C  GMK+ VNV ++ S S
Sbjct: 69  GSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVNVVSSDSKS 128

Query: 129 PAAAPQPPNGLPPPSSKTGDNG 149
            ++     +G    S     +G
Sbjct: 129 ASSPSGSGSGSDSGSGSGSSSG 150

The following BLAST results are available for this feature:

BLAST of Sed0025390.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877141.1	3.2e-68	76.67	stellacyanin-like [Benincasa hispida]	[more]
XP_023549499.1	5.5e-68	75.69	stellacyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_011654854.1	1.1e-65	75.14	blue copper protein [Cucumis sativus] >KGN50322.1 hypothetical protein Csa_00051...	[more]
XP_022969745.1	1.5e-65	72.53	stellacyanin [Cucurbita maxima]	[more]
KAG6579635.1	5.7e-65	74.03	Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0025390.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82081	3.3e-15	38.73	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
Q8LC95	2.6e-12	33.33	Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 S...	[more]
Q9SK27	7.6e-12	37.12	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
Q02917	1.3e-11	32.50	Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1	[more]
A0A0M4FTF3	2.9e-11	34.45	Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1	[more]

BLAST of Sed0025390.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPG5	5.6e-66	75.14	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G167140...	[more]
A0A6J1I0T8	7.3e-66	72.53	stellacyanin OS=Cucurbita maxima OX=3661 GN=LOC111468850 PE=4 SV=1	[more]
A0A6J1ERB5	6.1e-65	73.48	stellacyanin OS=Cucurbita moschata OX=3662 GN=LOC111435827 PE=4 SV=1	[more]
A0A1S3AT20	1.3e-62	75.00	stellacyanin OS=Cucumis melo OX=3656 GN=LOC103482542 PE=4 SV=1	[more]
A0A5A7UGX7	2.9e-62	75.00	Stellacyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00080 P...	[more]

BLAST of Sed0025390.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07475.1	2.6e-39	50.00	Cupredoxin superfamily protein	[more]
AT3G17675.1	1.4e-16	38.83	Cupredoxin superfamily protein	[more]
AT2G32300.1	2.3e-16	38.73	uclacyanin 1	[more]
AT5G26330.1	8.9e-16	30.22	Cupredoxin superfamily protein	[more]
AT3G27200.1	4.4e-15	33.10	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 34..113 e-value: 5.2E-22 score: 77.7
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 23..121 score: 36.602219
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 21..126 e-value: 1.9E-31 score: 110.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 22..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	PANTHER	PTHR33021:SF70	OSJNBA0079A21.6 PROTEIN	coord: 7..171
None	No IPR available	CDD	cd04216	Phytocyanin	coord: 23..119 e-value: 1.75097E-40 score: 130.458
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 7..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0025390	Sed0025390	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025390.1-exon	Sed0025390.1-exon-LG05:4430393..4430555	exon
Sed0025390.1-exon	Sed0025390.1-exon-LG05:4431589..4431962	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025390.1-cds	Sed0025390.1-cds-LG05:4430393..4430555	CDS
Sed0025390.1-cds	Sed0025390.1-cds-LG05:4431589..4431962	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0025390.1	Sed0025390.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity