Sed0025090.1 (mRNA) Chayote v1

Overview


Name	Sed0025090.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	CRIB domain-containing protein
Location	LG01: 71116896 .. 71118445 (-)
Sequence length	534
RNA-Seq Expression	Sed0025090.1
Synteny	Sed0025090.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAACAATAAAGTGAAAGGCCTCCTCAAAGGCCTAAGATACATTTCTCAAATATTTGGTATGTCAAAAACAAAAAAATCATTTTTCTTTGCTTTTTTCTCTTGTAAAATTTATTAATTGTTATTGGTTGAATTTTTGCAGAGAATGAGAAAGAACCTGAAATGCAGATTGGTTTTCCCACAGATGTCAAGCATGTTGCCCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGGTATATCTTTATTTATTATTATTTTTTTTATAAAAAAGTTGATTTTTTTTGGTATATTACAAGTTTATTATTCTCAAATGTTTATGTTTGGGCTGACAACAAAAATAACTCAATCATATTAGTGTCTAAGAATAAAAAGGTTATGAGTTTGAATCCACCCCAAAATATGATTTAGTATTTGAAAGGGAATGTTAGTGAAATATGTAGAAAACTTATTTTTAGATAAGTAAGTGATTATCATGGATTCAAATTCATTATCTCTCAATTTCATAATATCTATTAACCACTAGGCTACTTTATGATATTACCTTTAAATCGATAATAAACCTATAATTTTCTATTTAATAAGTCTGGCATATTTGAAATCTATAGATGAATTAATAAATTTTATGCCTAAATTTTTACTTATGTGTCTTATATATATGTAAAATTTAGAAATTTTCAAATGGGTAAAAGAAAATGTGTAGAGCATAAAATTCAAAATTCAAAACTTTGGAATTTTATTAGAAAAAAGATCAAATTTTAAGAAGAAAAATGGATTCAATTTGAAATTGAGTGTGTTATGGACAATTGATTAATGCAGATGAATGATTTCAAATCTTCACCTGGAGTTCCATCTGCTCCTCCGGCCTCCAATGGAGCTCAAGGTAAAATATGAAATTATTTTCTGTTGTCATTTTTTTATAGTTTGATTTCTCTACTAAATATTTCCTCTATGATTTAGATTTGTATAATTCTAAAATATGAAACTAATGTACAATTTAGTTCGAACGGAATTCCTAATAAAAAAGTTATGAATTTAAATTTAAAATTATTGTTGTATTAAAAAAAAAAAAGTTATTAAATTATGTTTTTTTATTTAACGATACATGTTATAAGATTTTACTAAATGGCATTAAAGTGGTTGGTTTCACTAACTTTACACATATATGTTATAATTTTATTTTATTTGAAAATTACTCATAAATATGAAAATAATAAAATGGGAATATGGCAGGTATGAACCAAACATCTCGGGACATGCCGGAGCTGCCGAAATCGGAGAGGCCAAAGTCAAAGAAATCTTCAAAGTCAAAGGAATCTTCGACCCGGGTCCCCGAGTCGCCGACCCAAAGCCTTTCCGGAGCTCCGAAGAAAGGGCGGCGGAAGAAAACGAAAGAGGAAGGACCGTCGAGAGTTAAATCCAAATGCACGGCGGCCGGAACTTGCTCGTCTCAGTTTTCCGATAACGGGTCGGACGCGGGATCCATCTCCAAAAGATCCACCGACGATGAGTTGTTAACTGGAGATGGGGTTTTTACATGA

mRNA sequence

ATGTCTAACAATAAAGTGAAAGGCCTCCTCAAAGGCCTAAGATACATTTCTCAAATATTTGAGAATGAGAAAGAACCTGAAATGCAGATTGGTTTTCCCACAGATGTCAAGCATGTTGCCCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGATGAATGATTTCAAATCTTCACCTGGAGTTCCATCTGCTCCTCCGGCCTCCAATGGAGCTCAAGGTATGAACCAAACATCTCGGGACATGCCGGAGCTGCCGAAATCGGAGAGGCCAAAGTCAAAGAAATCTTCAAAGTCAAAGGAATCTTCGACCCGGGTCCCCGAGTCGCCGACCCAAAGCCTTTCCGGAGCTCCGAAGAAAGGGCGGCGGAAGAAAACGAAAGAGGAAGGACCGTCGAGAGTTAAATCCAAATGCACGGCGGCCGGAACTTGCTCGTCTCAGTTTTCCGATAACGGGTCGGACGCGGGATCCATCTCCAAAAGATCCACCGACGATGAGTTGTTAACTGGAGATGGGGTTTTTACATGA

Coding sequence (CDS)

ATGTCTAACAATAAAGTGAAAGGCCTCCTCAAAGGCCTAAGATACATTTCTCAAATATTTGAGAATGAGAAAGAACCTGAAATGCAGATTGGTTTTCCCACAGATGTCAAGCATGTTGCCCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGATGAATGATTTCAAATCTTCACCTGGAGTTCCATCTGCTCCTCCGGCCTCCAATGGAGCTCAAGGTATGAACCAAACATCTCGGGACATGCCGGAGCTGCCGAAATCGGAGAGGCCAAAGTCAAAGAAATCTTCAAAGTCAAAGGAATCTTCGACCCGGGTCCCCGAGTCGCCGACCCAAAGCCTTTCCGGAGCTCCGAAGAAAGGGCGGCGGAAGAAAACGAAAGAGGAAGGACCGTCGAGAGTTAAATCCAAATGCACGGCGGCCGGAACTTGCTCGTCTCAGTTTTCCGATAACGGGTCGGACGCGGGATCCATCTCCAAAAGATCCACCGACGATGAGTTGTTAACTGGAGATGGGGTTTTTACATGA

Protein sequence

MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSSPGVPSAPPASNGAQGMNQTSRDMPELPKSERPKSKKSSKSKESSTRVPESPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSDNGSDAGSISKRSTDDELLTGDGVFT

Homology

[Close]

BLAST of Sed0025090.1 vs. NCBI nr
Match: XP_038888498.1 (CRIB domain-containing protein RIC7-like [Benincasa hispida] >XP_038888499.1 CRIB domain-containing protein RIC7-like [Benincasa hispida])

HSP 1 Score: 225.7 bits (574), Expect = 3.1e-55
Identity = 135/221 (61.09%), Postives = 154/221 (69.68%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKS 60
           MSNNK+KGLLKGLRYISQIF+NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN+FK+
Sbjct: 1   MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKA 60

Query: 61  SPGVPSAP---------PASNGAQGMNQTSRDMPELP----------------------K 120
            PG+ SAP          + +  + M  T+RD+PELP                      K
Sbjct: 61  PPGISSAPHQEDASGQWASQDSKRDMAVTTRDLPELPKSSRRQSSTVGGSVGESPTTREK 120

Query: 121 SERPKSKKSSKSKESST----------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKSK 178
           SE+ KSKKSSKSKESS+          +  ESPTQSL G PKK RRKK+KEEG +R +SK
Sbjct: 121 SEKTKSKKSSKSKESSSSDSRRSSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRSRSK 180

[Close]

BLAST of Sed0025090.1 vs. NCBI nr
Match: KGN57890.1 (hypothetical protein Csa_011162 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-51
Identity = 132/219 (60.27%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKS 60
           MSNNK+KGLLKGLRYISQIF+NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN+FK 
Sbjct: 1   MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH 60

Query: 61  SPGVPSAPPAS------NGAQGMNQTSRDMPELP----------------------KSER 120
                    AS      +  + M  TSRDMPELP                      KSE+
Sbjct: 61  PNNGDIKQDASAQCVSQDSKRDMAVTSRDMPELPKSSKRQSSTVGGSVAESPTMRDKSEK 120

Query: 121 PKSKKSSKSKESST--------------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKS 178
            KSKKSSK++ESS+              +  ESPT+SL G PKKGRRKK+KEEG ++ +S
Sbjct: 121 VKSKKSSKARESSSSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRS 180

[Close]

BLAST of Sed0025090.1 vs. NCBI nr
Match: XP_031737542.1 (CRIB domain-containing protein RIC6 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-50
Identity = 133/225 (59.11%), Postives = 152/225 (67.56%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFK- 60
           MSNNK+KGLLKGLRYISQIF+NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN+FK 
Sbjct: 1   MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH 60

Query: 61  -SSPGVPSAPPASNGAQG----------MNQTSRDMPELP-------------------- 120
            ++  +     A   +QG          M  TSRDMPELP                    
Sbjct: 61  PNNGDIKQDASAQCVSQGNVIGIDSKRDMAVTSRDMPELPKSSKRQSSTVGGSVAESPTM 120

Query: 121 --KSERPKSKKSSKSKESST--------------RVPESPTQSLSGAPKKGRRKKTKEEG 178
             KSE+ KSKKSSK++ESS+              +  ESPT+SL G PKKGRRKK+KEEG
Sbjct: 121 RDKSEKVKSKKSSKARESSSSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEG 180

[Close]

BLAST of Sed0025090.1 vs. NCBI nr
Match: XP_022931172.1 (CRIB domain-containing protein RIC7 [Cucurbita moschata])

HSP 1 Score: 203.0 bits (515), Expect = 2.2e-48
Identity = 127/205 (61.95%), Postives = 140/205 (68.29%), Query Frame = 0


Query: 2   SNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSS 61
           +NNK+KGLLKGLRYISQIF+NEKEPEMQIG PTDVKHVAHIGWDGPSVNSPSWM +FK  
Sbjct: 3   NNNKMKGLLKGLRYISQIFDNEKEPEMQIGVPTDVKHVAHIGWDGPSVNSPSWMTEFKGD 62

Query: 62  PGVPSAPPASNGAQGMNQTSRDMPELP---------------------KSERPKSKKSSK 121
           PG  S   AS   Q  N T+RDMPE+P                     KSE+ +SKKSSK
Sbjct: 63  PGDASGQLAS---QDTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSK 122

Query: 122 SKESST--------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSD 178
           SKESST        R  E      SGAPKK RRKK+KE+G +R +SK  AA  CSSQFSD
Sbjct: 123 SKESSTSDGIRPSHRSSELSHGGESGAPKKARRKKSKEDGSTRSRSKGAAADICSSQFSD 182

[Close]

BLAST of Sed0025090.1 vs. NCBI nr
Match: XP_022996156.1 (CRIB domain-containing protein RIC7 [Cucurbita maxima])

HSP 1 Score: 199.1 bits (505), Expect = 3.1e-47
Identity = 126/205 (61.46%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 2   SNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSS 61
           +NNK+KGLLKGLRYISQIF+NEKEPEMQIG PTDVKHVAHIGWDGPSVNSPSWM +FK  
Sbjct: 3   NNNKMKGLLKGLRYISQIFDNEKEPEMQIGVPTDVKHVAHIGWDGPSVNSPSWMTEFKGD 62

Query: 62  PGVPSAPPASNGAQGMNQTSRDMPELP---------------------KSERPKSKKSSK 121
            G  S   AS   Q  N T+RDMPELP                     KSE+ +SKKSSK
Sbjct: 63  TGDASGQLAS---QDTNHTARDMPELPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSK 122

Query: 122 SKESST--------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSD 178
           SKESST        R  E      SGAPKK RRKK+KE+G +R +SK  AA  CSSQFS+
Sbjct: 123 SKESSTSDGIRPSHRSSELSQGGESGAPKKARRKKSKEDGSTRSRSKGAAADICSSQFSN 182

[Close]

BLAST of Sed0025090.1 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 86/178 (48.31%), Postives = 102/178 (57.30%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIF--ENEKEPEMQIGFPTDVKHVAHIGWDGPSVN--SPSWMN 60
           MS+ K+K LLKGLRYISQ+F  E EKE EMQIG PTDVKHVAHIGWDGPS N  +PSWMN
Sbjct: 5   MSSTKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMN 64

Query: 61  DFKSSPGVPSAPPASNGAQGMNQTS------RDMPELPKSERPKSKKSSKSKESSTRVPE 120
           DFKSSP + S          +   S      RD+P+LPKS R    KSS  K        
Sbjct: 65  DFKSSPVMESIQGLGEDDSSVKCQSEFGGRTRDLPKLPKSTR----KSSSEK-------- 124

Query: 121 SPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSDNGSDAGSISKRSTDDE 169
                  G+P K R  KTK     R  +K    GT SS+ + +  D+ S S+R+T DE
Sbjct: 125 -------GSPTKERSDKTKR----RTSNK----GTSSSRRTKD-EDSTSSSRRTTKDE 154

[Close]

BLAST of Sed0025090.1 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-22
Identity = 82/197 (41.62%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVN--SPSWMNDF 60
           MS++K+K LLKGLRYISQ+FE+EKE E+QIG PTDVKHVAHIGWDGPS N  +PSWM +F
Sbjct: 5   MSSSKMKSLLKGLRYISQVFESEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEF 64

Query: 61  KSSPGVPSAPPASNGAQGM------NQTSRDMPELPK-----------------SERPKS 120
            S  G  SA         +         SRD+P LPK                 S++ K 
Sbjct: 65  NSGGGFESAEGVGEDDSSIKCMSEYGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTKR 124

Query: 121 KKSSKSKESSTRVPESPTQ----------SLSGAPKKGRRKK--TKEEGPSRVKSKCTAA 161
           + S+K   SS+R P+  T+           L   PKK RRKK  TKE   +   S+ T  
Sbjct: 125 RSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKKKSTKETAVNGGSSRSTRR 184

[Close]

BLAST of Sed0025090.1 vs. ExPASy Swiss-Prot
Match: F4J424 (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-20
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 6   VKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFK------ 65
           +KGLLKGLRYI++IFE+EKEPEMQIG PTDVKHVAHIGW+GPS  +PSWM+DFK      
Sbjct: 5   MKGLLKGLRYIARIFEDEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKPTDQTK 64

Query: 66  -SSPGVPSAPPASNG----------AQGMNQTSRDMPELPKSERPKSKKSSKSKESST-- 125
             + G  +  P S+G          + G N  +     +  S RP  + + K +E +T  
Sbjct: 65  TETKGTSNKKPGSSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGS 124

Query: 126 --------RVPESPTQSLSGAPKKGRRKKTK 130
                    +P+   Q +   PK+ ++KK+K
Sbjct: 125 GSESGSGLELPQQTDQFV--VPKQSKQKKSK 153

[Close]

BLAST of Sed0025090.1 vs. ExPASy Swiss-Prot
Match: F4I5N6 (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.4e-19
Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 6   VKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSSPG-- 65
           VKGLLKGLRYI+QIF+ EK+ +MQIGFPTDVKHVAHIG DGP+ N PSWM DFK      
Sbjct: 4   VKGLLKGLRYITQIFDEEKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFKPQENEN 63

Query: 66  --VPSAPPASNGAQGMNQTSRDMPELPKSERPKSKKSSKSKESSTRVPESPTQSLSGA-- 125
             V S   A+N   G     +++  LP +++PK KK+ +  E+ ++    P ++ S +  
Sbjct: 64  GQVVSRADANNNQIGEGVGLQEL--LPPTDKPKHKKTRRKSETVSQNGSPPRRNSSASAS 123

Query: 126 ---PKKGRRKKTKEEG-------PSRVKSKCTAAGTCSSQFSDNGSDAGSISKRST 166
              PK  RR      G       PS  + +  +  T   + S   SD+ + S++ST
Sbjct: 124 DMQPKNTRRHHRSRHGSIDSSNDPSVRRRRVVSVTTNDMEGSYPLSDSSTHSRKST 177

[Close]

BLAST of Sed0025090.1 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 62/122 (50.82%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 6   VKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKS---SP 65
           +KGLLKGLRYI+QIF+ EKE EMQIGFPTDVKHVAHIG DGP+  +PSWMNDFK+     
Sbjct: 5   MKGLLKGLRYITQIFDEEKEQEMQIGFPTDVKHVAHIGSDGPTNTTPSWMNDFKTQEHEK 64

Query: 66  GVPSAPPASN--GAQGMNQTSRDMPE-LPKSERPKSKKSSKSKESSTRVPE---SPTQSL 119
           G   +   SN    QG NQ    + E LP +   K K+ ++ K      P    SP +  
Sbjct: 65  GQVVSRGNSNKYNPQGTNQRGAGLKELLPSNTNEKPKQKTRRKPGGAASPNHNGSPPRKS 124

[Close]

BLAST of Sed0025090.1 vs. ExPASy TrEMBL
Match: A0A0A0L7D1 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G374200 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51
Identity = 132/219 (60.27%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKS 60
           MSNNK+KGLLKGLRYISQIF+NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN+FK 
Sbjct: 1   MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH 60

Query: 61  SPGVPSAPPAS------NGAQGMNQTSRDMPELP----------------------KSER 120
                    AS      +  + M  TSRDMPELP                      KSE+
Sbjct: 61  PNNGDIKQDASAQCVSQDSKRDMAVTSRDMPELPKSSKRQSSTVGGSVAESPTMRDKSEK 120

Query: 121 PKSKKSSKSKESST--------------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKS 178
            KSKKSSK++ESS+              +  ESPT+SL G PKKGRRKK+KEEG ++ +S
Sbjct: 121 VKSKKSSKARESSSSDNIGPSRRNSDLNQGSESPTESLPGVPKKGRRKKSKEEGSTKSRS 180

[Close]

BLAST of Sed0025090.1 vs. ExPASy TrEMBL
Match: A0A6J1ESW1 (CRIB domain-containing protein RIC7 OS=Cucurbita moschata OX=3662 GN=LOC111437431 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 127/205 (61.95%), Postives = 140/205 (68.29%), Query Frame = 0


Query: 2   SNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSS 61
           +NNK+KGLLKGLRYISQIF+NEKEPEMQIG PTDVKHVAHIGWDGPSVNSPSWM +FK  
Sbjct: 3   NNNKMKGLLKGLRYISQIFDNEKEPEMQIGVPTDVKHVAHIGWDGPSVNSPSWMTEFKGD 62

Query: 62  PGVPSAPPASNGAQGMNQTSRDMPELP---------------------KSERPKSKKSSK 121
           PG  S   AS   Q  N T+RDMPE+P                     KSE+ +SKKSSK
Sbjct: 63  PGDASGQLAS---QDTNHTARDMPEIPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSK 122

Query: 122 SKESST--------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSD 178
           SKESST        R  E      SGAPKK RRKK+KE+G +R +SK  AA  CSSQFSD
Sbjct: 123 SKESSTSDGIRPSHRSSELSHGGESGAPKKARRKKSKEDGSTRSRSKGAAADICSSQFSD 182

[Close]

BLAST of Sed0025090.1 vs. ExPASy TrEMBL
Match: A0A6J1K3X0 (CRIB domain-containing protein RIC7 OS=Cucurbita maxima OX=3661 GN=LOC111491466 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-47
Identity = 126/205 (61.46%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 2   SNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSS 61
           +NNK+KGLLKGLRYISQIF+NEKEPEMQIG PTDVKHVAHIGWDGPSVNSPSWM +FK  
Sbjct: 3   NNNKMKGLLKGLRYISQIFDNEKEPEMQIGVPTDVKHVAHIGWDGPSVNSPSWMTEFKGD 62

Query: 62  PGVPSAPPASNGAQGMNQTSRDMPELP---------------------KSERPKSKKSSK 121
            G  S   AS   Q  N T+RDMPELP                     KSE+ +SKKSSK
Sbjct: 63  TGDASGQLAS---QDTNHTARDMPELPKASRRQSSTVGGSAGDSPTREKSEKTRSKKSSK 122

Query: 122 SKESST--------RVPESPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSD 178
           SKESST        R  E      SGAPKK RRKK+KE+G +R +SK  AA  CSSQFS+
Sbjct: 123 SKESSTSDGIRPSHRSSELSQGGESGAPKKARRKKSKEDGSTRSRSKGAAADICSSQFSN 182

[Close]

BLAST of Sed0025090.1 vs. ExPASy TrEMBL
Match: A0A1S3BHX9 (CRIB domain-containing protein RIC6-like OS=Cucumis melo OX=3656 GN=LOC103490063 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.8e-46
Identity = 135/265 (50.94%), Postives = 152/265 (57.36%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFK- 60
           MSNNK+KGLLKGLRYISQIF+NEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMN+FK 
Sbjct: 1   MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKH 60

Query: 61  ---------SSPGVPSAPPASNG------------------------------------- 120
                    SS    S   +SNG                                     
Sbjct: 61  PNNGDIQQDSSAQWASQDRSSNGKKMEMGLCKLVNQRQISKQNKLLKTRRYGGEINYEYE 120

Query: 121 -----AQGMNQTSRDMPELP----------------------KSERPKSKKSSKSKESST 178
                 + M  TSRD+PELP                      KSE+ KSKKSSK+KESS+
Sbjct: 121 IGIDSTRDMAVTSRDLPELPKSSRRQSSTLGGTVAESPTMRDKSEKAKSKKSSKAKESSS 180

[Close]

BLAST of Sed0025090.1 vs. ExPASy TrEMBL
Match: A0A6J1DMX0 (CRIB domain-containing protein RIC7 OS=Momordica charantia OX=3673 GN=LOC111022701 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.3e-46
Identity = 125/214 (58.41%), Postives = 140/214 (65.42%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSV-NSPSWMNDFK 60
           MSNNK+KGLLKGLRYISQIF+NEKEPEMQIGFPTDVKHVAHIGWDGPSV N+PSWMN+FK
Sbjct: 1   MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNNNPSWMNEFK 60

Query: 61  SSP---------GVPSAPPASNGAQGMNQTSRDMPELP---------------------K 120
           + P          V  A    +  + M  T+RDMPELP                     K
Sbjct: 61  APPPNGETNEDASVQWASQGGDSKRDMAVTTRDMPELPKSSRRQSSTVGGSAAESPTREK 120

Query: 121 SERPKSKKSSKSKESSTRVP------ESPTQSLSGAPKKGRRKKTKEE-GPSRVKSKCTA 177
           SE+PKS+KSSKSKESS R        ESPTQ   G PKK RRKK+K+  G    +S C A
Sbjct: 121 SEKPKSRKSSKSKESSRRSADLNQGGESPTQGAPGIPKKTRRKKSKDSAGEGSTRSTCKA 180

[Close]

BLAST of Sed0025090.1 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 86/178 (48.31%), Postives = 102/178 (57.30%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIF--ENEKEPEMQIGFPTDVKHVAHIGWDGPSVN--SPSWMN 60
           MS+ K+K LLKGLRYISQ+F  E EKE EMQIG PTDVKHVAHIGWDGPS N  +PSWMN
Sbjct: 5   MSSTKMKSLLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGPSDNATAPSWMN 64

Query: 61  DFKSSPGVPSAPPASNGAQGMNQTS------RDMPELPKSERPKSKKSSKSKESSTRVPE 120
           DFKSSP + S          +   S      RD+P+LPKS R    KSS  K        
Sbjct: 65  DFKSSPVMESIQGLGEDDSSVKCQSEFGGRTRDLPKLPKSTR----KSSSEK-------- 124

Query: 121 SPTQSLSGAPKKGRRKKTKEEGPSRVKSKCTAAGTCSSQFSDNGSDAGSISKRSTDDE 169
                  G+P K R  KTK     R  +K    GT SS+ + +  D+ S S+R+T DE
Sbjct: 125 -------GSPTKERSDKTKR----RTSNK----GTSSSRRTKD-EDSTSSSRRTTKDE 154

[Close]

BLAST of Sed0025090.1 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 )

HSP 1 Score: 106.3 bits (264), Expect = 2.6e-23
Identity = 82/197 (41.62%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 1   MSNNKVKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVN--SPSWMNDF 60
           MS++K+K LLKGLRYISQ+FE+EKE E+QIG PTDVKHVAHIGWDGPS N  +PSWM +F
Sbjct: 5   MSSSKMKSLLKGLRYISQVFESEKEEEIQIGNPTDVKHVAHIGWDGPSANATAPSWMTEF 64

Query: 61  KSSPGVPSAPPASNGAQGM------NQTSRDMPELPK-----------------SERPKS 120
            S  G  SA         +         SRD+P LPK                 S++ K 
Sbjct: 65  NSGGGFESAEGVGEDDSSIKCMSEYGGRSRDLPNLPKSTRKAASEKGSPTKDKSSDKTKR 124

Query: 121 KKSSKSKESSTRVPESPTQ----------SLSGAPKKGRRKK--TKEEGPSRVKSKCTAA 161
           + S+K   SS+R P+  T+           L   PKK RRKK  TKE   +   S+ T  
Sbjct: 125 RSSNKGTSSSSRRPKEATEEQDELSSWPSGLPEIPKKSRRKKKSTKETAVNGGSSRSTRR 184

[Close]

BLAST of Sed0025090.1 vs. TAIR 10
Match: AT3G23380.1 (ROP-interactive CRIB motif-containing protein 5 )

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 6   VKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFK------ 65
           +KGLLKGLRYI++IFE+EKEPEMQIG PTDVKHVAHIGW+GPS  +PSWM+DFK      
Sbjct: 5   MKGLLKGLRYIARIFEDEKEPEMQIGIPTDVKHVAHIGWEGPSATTPSWMHDFKPTDQTK 64

Query: 66  -SSPGVPSAPPASNG----------AQGMNQTSRDMPELPKSERPKSKKSSKSKESST-- 125
             + G  +  P S+G          + G N  +     +  S RP  + + K +E +T  
Sbjct: 65  TETKGTSNKKPGSSGEKHRKGRRKTSTGNNSPTESPSRVGGSVRPSKRNTGKQREQNTGS 124

Query: 126 --------RVPESPTQSLSGAPKKGRRKKTK 130
                    +P+   Q +   PK+ ++KK+K
Sbjct: 125 GSESGSGLELPQQTDQFV--VPKQSKQKKSK 153

[Close]

BLAST of Sed0025090.1 vs. TAIR 10
Match: AT1G04450.1 (ROP-interactive CRIB motif-containing protein 3 )

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-20
Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 6   VKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKSSPG-- 65
           VKGLLKGLRYI+QIF+ EK+ +MQIGFPTDVKHVAHIG DGP+ N PSWM DFK      
Sbjct: 4   VKGLLKGLRYITQIFDEEKDKDMQIGFPTDVKHVAHIGSDGPATNVPSWMGDFKPQENEN 63

Query: 66  --VPSAPPASNGAQGMNQTSRDMPELPKSERPKSKKSSKSKESSTRVPESPTQSLSGA-- 125
             V S   A+N   G     +++  LP +++PK KK+ +  E+ ++    P ++ S +  
Sbjct: 64  GQVVSRADANNNQIGEGVGLQEL--LPPTDKPKHKKTRRKSETVSQNGSPPRRNSSASAS 123

Query: 126 ---PKKGRRKKTKEEG-------PSRVKSKCTAAGTCSSQFSDNGSDAGSISKRST 166
              PK  RR      G       PS  + +  +  T   + S   SD+ + S++ST
Sbjct: 124 DMQPKNTRRHHRSRHGSIDSSNDPSVRRRRVVSVTTNDMEGSYPLSDSSTHSRKST 177

[Close]

BLAST of Sed0025090.1 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 )

HSP 1 Score: 94.7 bits (234), Expect = 7.7e-20
Identity = 62/122 (50.82%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 6   VKGLLKGLRYISQIFENEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNDFKS---SP 65
           +KGLLKGLRYI+QIF+ EKE EMQIGFPTDVKHVAHIG DGP+  +PSWMNDFK+     
Sbjct: 5   MKGLLKGLRYITQIFDEEKEQEMQIGFPTDVKHVAHIGSDGPTNTTPSWMNDFKTQEHEK 64

Query: 66  GVPSAPPASN--GAQGMNQTSRDMPE-LPKSERPKSKKSSKSKESSTRVPE---SPTQSL 119
           G   +   SN    QG NQ    + E LP +   K K+ ++ K      P    SP +  
Sbjct: 65  GQVVSRGNSNKYNPQGTNQRGAGLKELLPSNTNEKPKQKTRRKPGGAASPNHNGSPPRKS 124

The following BLAST results are available for this feature:

BLAST of Sed0025090.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888498.1	3.1e-55	61.09	CRIB domain-containing protein RIC7-like [Benincasa hispida] >XP_038888499.1 CRI...	[more]
KGN57890.1	4.7e-51	60.27	hypothetical protein Csa_011162 [Cucumis sativus]	[more]
XP_031737542.1	1.8e-50	59.11	CRIB domain-containing protein RIC6 [Cucumis sativus]	[more]
XP_022931172.1	2.2e-48	61.95	CRIB domain-containing protein RIC7 [Cucurbita moschata]	[more]
XP_022996156.1	3.1e-47	61.46	CRIB domain-containing protein RIC7 [Cucurbita maxima]	[more]

BLAST of Sed0025090.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3K8	7.3e-23	48.31	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1...	[more]
Q1PF35	3.6e-22	41.62	CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1...	[more]
F4J424	2.6e-20	41.72	CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1...	[more]
F4I5N6	6.4e-19	40.34	CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1...	[more]
F4IVV0	1.1e-18	50.82	CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1...	[more]

BLAST of Sed0025090.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7D1	2.3e-51	60.27	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G374200 PE=4 S...	[more]
A0A6J1ESW1	1.0e-48	61.95	CRIB domain-containing protein RIC7 OS=Cucurbita moschata OX=3662 GN=LOC11143743...	[more]
A0A6J1K3X0	1.5e-47	61.46	CRIB domain-containing protein RIC7 OS=Cucurbita maxima OX=3661 GN=LOC111491466 ...	[more]
A0A1S3BHX9	2.8e-46	50.94	CRIB domain-containing protein RIC6-like OS=Cucumis melo OX=3656 GN=LOC103490063...	[more]
A0A6J1DMX0	8.3e-46	58.41	CRIB domain-containing protein RIC7 OS=Momordica charantia OX=3673 GN=LOC1110227...	[more]

BLAST of Sed0025090.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28556.1	5.2e-24	48.31	PAK-box/P21-Rho-binding family protein	[more]
AT2G20430.1	2.6e-23	41.62	ROP-interactive CRIB motif-containing protein 6	[more]
AT3G23380.1	1.8e-21	41.72	ROP-interactive CRIB motif-containing protein 5	[more]
AT1G04450.1	4.5e-20	40.34	ROP-interactive CRIB motif-containing protein 3	[more]
AT2G33460.1	7.7e-20	50.82	ROP-interactive CRIB motif-containing protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	SMART	SM00285	PBD_5	coord: 30..61 e-value: 5.2E-6 score: 36.0
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 29..61 e-value: 2.2E-9 score: 37.6
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 30..43 score: 8.713597
IPR036936	CRIB domain superfamily	GENE3D	3.90.810.10	CRIB domain	coord: 25..64 e-value: 4.5E-5 score: 25.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..104
None	No IPR available	PANTHER	PTHR46325:SF31	CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1	coord: 6..79 coord: 89..152
None	No IPR available	CDD	cd00132	CRIB	coord: 28..66 e-value: 1.53748E-6 score: 41.2701
IPR044510	CRIB domain-containing protein RIC1-like	PANTHER	PTHR46325	CRIB DOMAIN-CONTAINING PROTEIN RIC8	coord: 6..79 coord: 89..152

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0025090	Sed0025090	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025090.1-exon	Sed0025090.1-exon-LG01:71116896..71117203	exon
Sed0025090.1-exon	Sed0025090.1-exon-LG01:71117554..71117617	exon
Sed0025090.1-exon	Sed0025090.1-exon-LG01:71118201..71118301	exon
Sed0025090.1-exon	Sed0025090.1-exon-LG01:71118385..71118445	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0025090.1-cds	Sed0025090.1-cds-LG01:71116896..71117203	CDS
Sed0025090.1-cds	Sed0025090.1-cds-LG01:71117554..71117617	CDS
Sed0025090.1-cds	Sed0025090.1-cds-LG01:71118201..71118301	CDS
Sed0025090.1-cds	Sed0025090.1-cds-LG01:71118385..71118445	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0025090.1	Sed0025090.1-protein	polypeptide