Sed0023932.1 (mRNA) Chayote v1

Overview


Name	Sed0023932.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Location	LG05: 23652278 .. 23652523 (+)
Sequence length	246
RNA-Seq Expression	Sed0023932.1
Synteny	Sed0023932.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTGCTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGAACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACATCCCTTGA

mRNA sequence

ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTGCTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGAACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACATCCCTTGA

Coding sequence (CDS)

ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTGCTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGAACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACATCCCTTGA

Protein sequence

MQLWLSVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

Homology

[Close]

BLAST of Sed0023932.1 vs. NCBI nr
Match: XP_023526549.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 6   SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTN 65
           SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTN
Sbjct: 42  SVKAVEEGVVKEGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRR-SHVGIQYTN 101

Query: 66  YEPEGWKCKCGPSFYIP 82
           YEPEGWKCKCGPSFY P
Sbjct: 102 YEPEGWKCKCGPSFYSP 117

[Close]

BLAST of Sed0023932.1 vs. NCBI nr
Match: XP_022955437.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 6   SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTN 65
           SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTN
Sbjct: 42  SVKAVEEGVVKGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRR-SHVGIQYTN 101

Query: 66  YEPEGWKCKCGPSFYIP 82
           YEPEGWKCKCGPSFY P
Sbjct: 102 YEPEGWKCKCGPSFYSP 117

[Close]

BLAST of Sed0023932.1 vs. NCBI nr
Match: XP_022980756.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima])

HSP 1 Score: 141.7 bits (356), Expect = 2.7e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 6   SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTN 65
           SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTN
Sbjct: 42  SVKAVEEGVVKEGEVYRGMRKIGSSPPSCEHKCYGCSPCEAIQVPTNNRR-SHVGIQYTN 101

Query: 66  YEPEGWKCKCGPSFYIP 82
           YEPEGWKCKCGPSFY P
Sbjct: 102 YEPEGWKCKCGPSFYSP 117

[Close]

BLAST of Sed0023932.1 vs. NCBI nr
Match: XP_004146810.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652342.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >KAE8651286.1 hypothetical protein Csa_001818 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 61/76 (80.26%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 6   SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNY 65
           S + V+GVKE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNY
Sbjct: 42  SKQAVKGVKEE-EFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNY 101

Query: 66  EPEGWKCKCGPSFYIP 82
           EPEGWKCKCGPSFY P
Sbjct: 102 EPEGWKCKCGPSFYSP 116

[Close]

BLAST of Sed0023932.1 vs. NCBI nr
Match: XP_008447616.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447617.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_008447618.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >KAA0036717.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa] >TYK03693.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 6   SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNY 65
           S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNY
Sbjct: 41  SKQAVKGIKEE-EFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNY 100

Query: 66  EPEGWKCKCGPSFYIP 82
           EPEGWKCKCGPSFY P
Sbjct: 101 EPEGWKCKCGPSFYSP 115

[Close]

BLAST of Sed0023932.1 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-14
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 24  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP 77
           R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y NY+PEGW+C C P
Sbjct: 55  RRIGSKPPSCEKKCYGCEPCEAIQFPTISSI-PHLSPHYANYQPEGWRCHCPP 106

[Close]

BLAST of Sed0023932.1 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.2e-10
Identity = 31/76 (40.79%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 25  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNY 82
           ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]

BLAST of Sed0023932.1 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-09
Identity = 28/61 (45.90%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 21  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYI 80
           R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+
Sbjct: 101 RILRGLGSSPPRCSSKCGRCTPCKPVHVPV--PPGTPVTAE---YYPEAWRCKCGNKLYM 156

Query: 81  P 82
           P
Sbjct: 161 P 156

[Close]

BLAST of Sed0023932.1 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.4e-07
Identity = 23/55 (41.82%), Postives = 29/55 (52.73%), Query Frame = 0


Query: 27  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP 82
           GS PPMC  KC  C PC+A+ VP          +    Y PE W+CKCG   ++P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGL-----IMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Sed0023932.1 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.5e-07
Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 27  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP 82
           GSSPP C  KC  C PC+ + VP   + G  + ++   Y PE W+CKCG   ++P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPI--QPGLSMPLE---YYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Sed0023932.1 vs. ExPASy TrEMBL
Match: A0A6J1GTM4 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457464 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 6   SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTN 65
           SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTN
Sbjct: 42  SVKAVEEGVVKGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRR-SHVGIQYTN 101

Query: 66  YEPEGWKCKCGPSFYIP 82
           YEPEGWKCKCGPSFY P
Sbjct: 102 YEPEGWKCKCGPSFYSP 117

[Close]

BLAST of Sed0023932.1 vs. ExPASy TrEMBL
Match: A0A6J1IUG9 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480029 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 6   SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTN 65
           SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTN
Sbjct: 42  SVKAVEEGVVKEGEVYRGMRKIGSSPPSCEHKCYGCSPCEAIQVPTNNRR-SHVGIQYTN 101

Query: 66  YEPEGWKCKCGPSFYIP 82
           YEPEGWKCKCGPSFY P
Sbjct: 102 YEPEGWKCKCGPSFYSP 117

[Close]

BLAST of Sed0023932.1 vs. ExPASy TrEMBL
Match: A0A0A0LCQ8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G847610 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.9e-30
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 7  VKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYE 66
          +K V+GVKE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYE
Sbjct: 6  IKAVKGVKEE-EFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYE 65

Query: 67 PEGWKCKCGPSFYIP 82
          PEGWKCKCGPSFY P
Sbjct: 66 PEGWKCKCGPSFYSP 79

[Close]

BLAST of Sed0023932.1 vs. ExPASy TrEMBL
Match: A0A1S3BIS6 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 6   SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNY 65
           S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNY
Sbjct: 41  SKQAVKGIKEE-EFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNY 100

Query: 66  EPEGWKCKCGPSFYIP 82
           EPEGWKCKCGPSFY P
Sbjct: 101 EPEGWKCKCGPSFYSP 115

[Close]

BLAST of Sed0023932.1 vs. ExPASy TrEMBL
Match: A0A5D3BVF6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00550 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 59/76 (77.63%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 6   SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNY 65
           S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNY
Sbjct: 41  SKQAVKGIKEE-EFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNY 100

Query: 66  EPEGWKCKCGPSFYIP 82
           EPEGWKCKCGPSFY P
Sbjct: 101 EPEGWKCKCGPSFYSP 115

[Close]

BLAST of Sed0023932.1 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-15
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 24  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP 77
           R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y NY+PEGW+C C P
Sbjct: 55  RRIGSKPPSCEKKCYGCEPCEAIQFPTISSI-PHLSPHYANYQPEGWRCHCPP 106

[Close]

BLAST of Sed0023932.1 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 5.1e-11
Identity = 31/76 (40.79%), Postives = 38/76 (50.00%), Query Frame = 0


Query: 25  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNY 82
           ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]

BLAST of Sed0023932.1 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-10
Identity = 28/61 (45.90%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 21  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYI 80
           R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+
Sbjct: 175 RILRGLGSSPPRCSSKCGRCTPCKPVHVPV--PPGTPVTAE---YYPEAWRCKCGNKLYM 230

Query: 81  P 82
           P
Sbjct: 235 P 230

[Close]

BLAST of Sed0023932.1 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-10
Identity = 28/61 (45.90%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 21  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYI 80
           R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+
Sbjct: 101 RILRGLGSSPPRCSSKCGRCTPCKPVHVPV--PPGTPVTAE---YYPEAWRCKCGNKLYM 156

Query: 81  P 82
           P
Sbjct: 161 P 156

[Close]

BLAST of Sed0023932.1 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08
Identity = 23/55 (41.82%), Postives = 29/55 (52.73%), Query Frame = 0


Query: 27  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP 82
           GS PPMC  KC  C PC+A+ VP          +    Y PE W+CKCG   ++P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGL-----IMPLEYYPEAWRCKCGNKLFMP 107

The following BLAST results are available for this feature:

BLAST of Sed0023932.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526549.1	2.1e-30	81.82	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955437.1	2.1e-30	81.82	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]	[more]
XP_022980756.1	2.7e-30	81.82	EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]	[more]
XP_004146810.1	1.8e-29	80.26	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPI...	[more]
XP_008447616.1	3.0e-29	77.63	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo] >XP_0084476...	[more]

BLAST of Sed0023932.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C4B8C4	2.8e-14	60.38	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	7.2e-10	40.79	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	2.7e-09	45.90	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	4.4e-07	41.82	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	7.5e-07	41.82	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Sed0023932.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GTM4	1.0e-30	81.82	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IUG9	1.3e-30	81.82	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0LCQ8	2.9e-30	81.33	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G847...	[more]
A0A1S3BIS6	1.4e-29	77.63	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030...	[more]
A0A5D3BVF6	1.4e-29	77.63	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Sed0023932.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13898.1	2.0e-15	60.38	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT5G10310.1	5.1e-11	40.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30370.1	1.9e-10	45.90	allergen-related	[more]
AT2G30370.2	1.9e-10	45.90	allergen-related	[more]
AT3G22820.1	3.1e-08	41.82	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 25..81 e-value: 9.2E-21 score: 73.6
None	No IPR available	PANTHER	PTHR33109:SF14	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3	coord: 15..81
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 15..81

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0023932	Sed0023932	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023932.1-exon	Sed0023932.1-exon-LG05:23652278..23652523	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0023932.1-cds	Sed0023932.1-cds-LG05:23652278..23652523	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0023932.1	Sed0023932.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0010052	guard cell differentiation
cellular_component	GO:0005576	extracellular region