Sed0023297.3 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAAAAGGTTTGAAGAAGGAATATTCAAATTTCAAAGTTTGAAAGGCGCAAAGTAAAACGGGAAATATGAGATAGCGACGCTTTTTCTCTTCTCCTTCACTCATCAATTGCCCAAACCAAACCCTTCGTTTTAAACTCGCTCTTTCAATCGCCATTTTCAAATCCCTGAACCCACTTCCATTTCCATCAACAATGGAGAACGATTCTTCGGCAGCTATGGAGATCAAGGCCCTTCCCACCCACGACGGAAAGTACCTGCTCTACAACGTCCTCGGCAACTTATTCGAGGTCTCCGCCAAGTACGGCTCTTCCATTCAACCTGTTGGGCGCGGTGCTTACGGCATTGTTTGGTGAATTCATCGCTTCTTTTGCTCATTCCTGCTCTCTTTTGATTCTTGATCTTCGTTTTTCCCGTCGATTTGGGGTGGGATTCGATTCCTGTAACAGTTCGATTTTAGGTCATATGCCTGATTTGTTTCCAATTTCCTTGTTGAATGGTTTTGATTATCTGTGTTTGCTCAGCTGCACGACGAATTTGGAGACGAAAGATGAGGTGGCGATTAAGAAGATTGGGAATGCTTTTGATAACAGGATTGATGCCAAGAGGACTCTTCGTGAGATTAAACTTCTGTGCCATATGGACCATGAAAATGTATTTGTTTATTTATCCCATTTGATTTTGTTCATTTGGGTTGCAATACTTTGATATTCATTAGTGTTTGGTGGTGGGATATTTGAATCCTTGGAGAGTTTCTCTAGGGAACTGATTTTGTCCCTCCATTGAAGCATGATTGTCTCTTTTTTCTCTTTTCAGATTATAAAAATCAAAGATATCATTCCTCCACCAGAGAAGGAAAAATTCAATGATGTGTATATTGTGTATGAATTAATGGATACTGACCTTCATCAGATCATTCGCTCTAGCCAGGCTCTAACTGATGATCACTGTCAGGTAAGGGATACTTATCATATCATTATAGAATATTACATTTTGTGAGATGTTAGGAAGAGTCTGTTTCAATAATTAATATAAAATCCGAAGGGACGGCCTCGCTGGTAGGGCTTGGGATTTCCAAAGTACGCTCCTTTAGAAGTCTCAAGTTTGAAACTCACGAGTGAGCTTAATTGTAAAATCACTTGTTGTCTTTGGATCCTACCTTAGGATGGATTCGCCTGCTCCGATTGCTGGCTATAAAAATAAGAAGTGATTTATGGTATGGCTTTATGTCGATTTTTGTTTTGATTGAGCAATGAGAAACTATCCTAATGTTTTTTACGTTTGGTTGGAGAACCACTCTCTATAACCCTGTTAAAGTAGTATCTGTTTGTTGTTGTTTTGACAGTACTTCCTATACCAATTACTTCGAGGTTTGAAGTATTTGCACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACCTGCTTCTAAATGCAAATTGTGACCTCAAGATTTGTGACTTTGGGTTAGCAAGAACAACGTCGGAGACAGATTTCATGACCGAATATGTTGTAACTCGATGGTATCGCGCCCCTGAGCTATTACTCAACACTTCTGAATACACTGCAGCGATTGATATTTGGTCTGTTGGATGTATTCTCATGGAAATTCTAAGGAGGGAGCCACTGTTCCCTGGTAAAGATTATGTGCAGCAATTAGGTCTTATAACAGAGGTACTTAATCATTGTCTTCTAATTTTATGCCTGACACTGAGGTGATCTTATTGTTTTTACTGAAATATTATTTGCACGGATTGCAACTTTAGATTTGTTCTGCATGTGAATAGAGTTATTTCTTGATCACTTCCCCATAAATAGTTGCTAGGTTCACCAGATGATTCAGATCTTGGGTTCCTTAGAAGTGATAATGCAAGGAAGTATGTAAAGCAACTTCCTCATTTCCCAAAACAACCGTTAACCGAAAAGTTCCCAGATCTTCCTCCACTGGCTGTTGATCTTGCAGAGAGGATGCTACTCTTTGATCCAAGCAAGAGAATAACTGGTAAGCACCTGTACCTTTGCATCTGACATTACTTAAAGAACCTCTTTTTCATCTCTCCTACATTTTCTTGATATGAGATGTATTTCTTATCGTGTTTATTAGTCGAGGAGGCAATGAGTCACCCATATGTAATAAGTCTTCATGAAATCAATGAAGAACCAACCTGCCCTTCTCCTTTCAACTTCGATTTTGAGCAGGCATCCTTGGATGAAGAAGATATAAAAGAGCTTATATGGAGAGAGTCTCTCAAGTTCAATCCCAATTACATGTAGTTTCAAACATTTTGCTCCGCGGTTGAAGAGTTGATCTCGTTTCGAAGATTGAGTATAATAGTGTTACTTGATGTCGTGTTAGCCGTTGCCAAGTTGGCAACAAAACTGGGAACAAATAGTTCTTGTATATAATCATGGAAATGGTTCATTTATCAGGAATTAGAATGGTTCTAGTTCTATATTCACCATCTTCTGGAATCTTGCATCCAGTGATGACTTGTGTGACATAAAAAACGGCTGCATCTTCCTCAGCCTTTAGATGGAGTTTGTTTGCTCATGTTTTTTATTACACTAGGAAGTGAAATTTGTCTATGATAAAGTGTAATGGTTTGCTGCTCTTCCTGGTATTATTTCTACTGTTTAATACCAAAAATACAGTTTTGTTTTGAGATTATGAGTTCATGTAGAAAATGGAATGACTGTTATCAACATACAAAGGTGGTTTTGTTACTGTTGATGTGTGGAGGCAG GAGAAAAAGGTTTGAAGAAGGAATATTCAAATTTCAAAGTTTGAAAGGCGCAAAGTAAAACGGGAAATATGAGATAGCGACGCTTTTTCTCTTCTCCTTCACTCATCAATTGCCCAAACCAAACCCTTCGTTTTAAACTCGCTCTTTCAATCGCCATTTTCAAATCCCTGAACCCACTTCCATTTCCATCAACAATGGAGAACGATTCTTCGGCAGCTATGGAGATCAAGGCCCTTCCCACCCACGACGGAAAGTACCTGCTCTACAACGTCCTCGGCAACTTATTCGAGGTCTCCGCCAAGTACGGCTCTTCCATTCAACCTGTTGGGCGCGGTGCTTACGGCATTGTTTGCTGCACGACGAATTTGGAGACGAAAGATGAGGTGGCGATTAAGAAGATTGGGAATGCTTTTGATAACAGGATTGATGCCAAGAGGACTCTTCGTGAGATTAAACTTCTGTGCCATATGGACCATGAAAATATTATAAAAATCAAAGATATCATTCCTCCACCAGAGAAGGAAAAATTCAATGATGTGTATATTGTGTATGAATTAATGGATACTGACCTTCATCAGATCATTCGCTCTAGCCAGGCTCTAACTGATGATCACTGTCAGTACTTCCTATACCAATTACTTCGAGGTTTGAAGTATTTGCACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACCTGCTTCTAAATGCAAATTGTGACCTCAAGATTTGTGACTTTGGGTTAGCAAGAACAACGTCGGAGACAGATTTCATGACCGAATATGTTGTAACTCGATGGTATCGCGCCCCTGAGCTATTACTCAACACTTCTGAATACACTGCAGCGATTGATATTTGGTCTGTTGGATGTATTCTCATGGAAATTCTAAGGAGGGAGCCACTGTTCCCTGGTAAAGATTATGTGCAGCAATTAGGTCTTATAACAGAGGTACTTAATCATTGTCTTCTAATTTTATGCCTGACACTGAGGTGATCTTATTGTTTTTACTGAAATATTATTTGCACGGATTGCAACTTTAGATTTGTTCTGCATGTGAATAGAGTTATTTCTTGATCACTTCCCCATAAATAGTTGCTAGGTTCACCAGATGATTCAGATCTTGGGTTCCTTAGAAGTGATAATGCAAGGAAGTATGTAAAGCAACTTCCTCATTTCCCAAAACAACCGTTAACCGAAAAGTTCCCAGATCTTCCTCCACTGGCTGTTGATCTTGCAGAGAGGATGCTACTCTTTGATCCAAGCAAGAGAATAACTGTCGAGGAGGCAATGAGTCACCCATATGTAATAAGTCTTCATGAAATCAATGAAGAACCAACCTGCCCTTCTCCTTTCAACTTCGATTTTGAGCAGGCATCCTTGGATGAAGAAGATATAAAAGAGCTTATATGGAGAGAGTCTCTCAAGTTCAATCCCAATTACATGTAGTTTCAAACATTTTGCTCCGCGGTTGAAGAGTTGATCTCGTTTCGAAGATTGAGTATAATAGTGTTACTTGATGTCGTGTTAGCCGTTGCCAAGTTGGCAACAAAACTGGGAACAAATAGTTCTTGTATATAATCATGGAAATGGTTCATTTATCAGGAATTAGAATGGTTCTAGTTCTATATTCACCATCTTCTGGAATCTTGCATCCAGTGATGACTTGTGTGACATAAAAAACGGCTGCATCTTCCTCAGCCTTTAGATGGAGTTTGTTTGCTCATGTTTTTTATTACACTAGGAAGTGAAATTTGTCTATGATAAAGTGTAATGGTTTGCTGCTCTTCCTGGTATTATTTCTACTGTTTAATACCAAAAATACAGTTTTGTTTTGAGATTATGAGTTCATGTAGAAAATGGAATGACTGTTATCAACATACAAAGGTGGTTTTGTTACTGTTGATGTGTGGAGGCAG ATGGAGAACGATTCTTCGGCAGCTATGGAGATCAAGGCCCTTCCCACCCACGACGGAAAGTACCTGCTCTACAACGTCCTCGGCAACTTATTCGAGGTCTCCGCCAAGTACGGCTCTTCCATTCAACCTGTTGGGCGCGGTGCTTACGGCATTGTTTGCTGCACGACGAATTTGGAGACGAAAGATGAGGTGGCGATTAAGAAGATTGGGAATGCTTTTGATAACAGGATTGATGCCAAGAGGACTCTTCGTGAGATTAAACTTCTGTGCCATATGGACCATGAAAATATTATAAAAATCAAAGATATCATTCCTCCACCAGAGAAGGAAAAATTCAATGATGTGTATATTGTGTATGAATTAATGGATACTGACCTTCATCAGATCATTCGCTCTAGCCAGGCTCTAACTGATGATCACTGTCAGTACTTCCTATACCAATTACTTCGAGGTTTGAAGTATTTGCACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACCTGCTTCTAAATGCAAATTGTGACCTCAAGATTTGTGACTTTGGGTTAGCAAGAACAACGTCGGAGACAGATTTCATGACCGAATATGTTGTAACTCGATGGTATCGCGCCCCTGAGCTATTACTCAACACTTCTGAATACACTGCAGCGATTGATATTTGGTCTGTTGGATGTATTCTCATGGAAATTCTAAGGAGGGAGCCACTGTTCCCTGGTAAAGATTATGTGCAGCAATTAGGTCTTATAACAGAGGTACTTAATCATTGTCTTCTAATTTTATGCCTGACACTGAGGTGA MENDSSAAMEIKALPTHDGKYLLYNVLGNLFEVSAKYGSSIQPVGRGAYGIVCCTTNLETKDEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHENIIKIKDIIPPPEKEKFNDVYIVYELMDTDLHQIIRSSQALTDDHCQYFLYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNTSEYTAAIDIWSVGCILMEILRREPLFPGKDYVQQLGLITEVLNHCLLILCLTLR Homology
BLAST of Sed0023297.3 vs. NCBI nr
Match: XP_004148790.2 (mitogen-activated protein kinase homolog NTF6 [Cucumis sativus] >KGN64720.1 hypothetical protein Csa_013975 [Cucumis sativus]) HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136 Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Sed0023297.3 vs. NCBI nr
Match: XP_022970376.1 (mitogen-activated protein kinase homolog NTF6 [Cucurbita maxima]) HSP 1 Score: 495.7 bits (1275), Expect = 2.4e-136 Identity = 242/255 (94.90%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Sed0023297.3 vs. NCBI nr
Match: XP_022964848.1 (mitogen-activated protein kinase homolog NTF6 [Cucurbita moschata] >XP_023519830.1 mitogen-activated protein kinase homolog NTF6-like [Cucurbita pepo subsp. pepo] >KAG6583474.1 Mitogen-activated protein kinase-like NTF6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 495.7 bits (1275), Expect = 2.4e-136 Identity = 242/255 (94.90%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Sed0023297.3 vs. NCBI nr
Match: XP_008465285.1 (PREDICTED: mitogen-activated protein kinase homolog NTF6 [Cucumis melo]) HSP 1 Score: 494.2 bits (1271), Expect = 7.1e-136 Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Sed0023297.3 vs. NCBI nr
Match: XP_022156700.1 (mitogen-activated protein kinase homolog NTF6-like [Momordica charantia]) HSP 1 Score: 493.8 bits (1270), Expect = 9.2e-136 Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy Swiss-Prot
Match: Q40531 (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum OX=4097 GN=NTF6 PE=2 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 2.8e-127 Identity = 215/255 (84.31%), Postives = 238/255 (93.33%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy Swiss-Prot
Match: A9S9Q8 (Mitogen-activated protein kinase 4b OS=Physcomitrium patens OX=3218 GN=MPK4b PE=1 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 4.1e-118 Identity = 202/245 (82.45%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy Swiss-Prot
Match: Q9LQQ9 (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=MPK13 PE=1 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-117 Identity = 199/240 (82.92%), Postives = 222/240 (92.50%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy Swiss-Prot
Match: Q40353 (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa OX=3879 GN=MMK2 PE=2 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 9.3e-115 Identity = 199/250 (79.60%), Postives = 221/250 (88.40%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy Swiss-Prot
Match: Q336X9 (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK6 PE=2 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 4.6e-114 Identity = 196/246 (79.67%), Postives = 217/246 (88.21%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy TrEMBL
Match: A0A0A0LS13 (Mitogen-activated protein kinase OS=Cucumis sativus OX=3659 GN=Csa_1G077220 PE=3 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 6.9e-137 Identity = 240/255 (94.12%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy TrEMBL
Match: A0A6J1I0F3 (Mitogen-activated protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111469378 PE=3 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 242/255 (94.90%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy TrEMBL
Match: A0A6J1HM42 (Mitogen-activated protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111464829 PE=3 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 242/255 (94.90%), Postives = 248/255 (97.25%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy TrEMBL
Match: A0A1S3CNX4 (Mitogen-activated protein kinase OS=Cucumis melo OX=3656 GN=LOC103502937 PE=3 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 3.4e-136 Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Sed0023297.3 vs. ExPASy TrEMBL
Match: A0A2D0ULS2 (Mitogen-activated protein kinase OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 4.5e-136 Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 0
BLAST of Sed0023297.3 vs. TAIR 10
Match: AT1G07880.1 (Protein kinase superfamily protein ) HSP 1 Score: 424.1 bits (1089), Expect = 8.4e-119 Identity = 199/239 (83.26%), Postives = 221/239 (92.47%), Query Frame = 0
BLAST of Sed0023297.3 vs. TAIR 10
Match: AT1G07880.2 (Protein kinase superfamily protein ) HSP 1 Score: 424.1 bits (1089), Expect = 8.4e-119 Identity = 199/240 (82.92%), Postives = 222/240 (92.50%), Query Frame = 0
BLAST of Sed0023297.3 vs. TAIR 10
Match: AT4G01370.1 (MAP kinase 4 ) HSP 1 Score: 411.4 bits (1056), Expect = 5.6e-115 Identity = 198/244 (81.15%), Postives = 216/244 (88.52%), Query Frame = 0
BLAST of Sed0023297.3 vs. TAIR 10
Match: AT2G43790.1 (MAP kinase 6 ) HSP 1 Score: 398.7 bits (1023), Expect = 3.8e-111 Identity = 184/245 (75.10%), Postives = 216/245 (88.16%), Query Frame = 0
BLAST of Sed0023297.3 vs. TAIR 10
Match: AT4G11330.1 (MAP kinase 5 ) HSP 1 Score: 398.7 bits (1023), Expect = 3.8e-111 Identity = 187/245 (76.33%), Postives = 215/245 (87.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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