Sed0022544.1 (mRNA) Chayote v1

Overview


Name	Sed0022544.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG01: 30842343 .. 30843114 (+)
Sequence length	772
RNA-Seq Expression	Sed0022544.1
Synteny	Sed0022544.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGGATTGATTTCCACTCTATAATTCAAATACGGAAATACCCACAAATTAAAATCTCTTATTTAGTGAAATTCTGTACATTTCGACATTGATTCATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATCGGCGGCAAGGGCTCGAGTTCTGCGGCGGCGACGGTGGTTTTCCCGAGCGGGGAAATACGGCGGTTTCACGAACAAGTAAAAGCGGCGGAGCTGATGTTTGAAACGCCGAATTTCTTCGTTGTGAATTCTCAATCGGTTAATGTTGGCCGGAGATTTTCGGCTCTGACGGCAGATGAGGATTTGGAAATGGGGAATTTGTATGTTATGTTTCCGATGAAGAAGGTGAATTCGGTGGTATCGGTGGCGGACATGGGGGCGTTGTTCCTCACCGGCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATCGTGGGCGGTGGAGAATCTGATGTTTGTGTTTGGCCGGCGGTGGAGGCAGATGAGTCGGAGGAGAAGTTGAAATTGGATGATGATGTGGAGGAGTTTTCGCCGGCGCCGGAATTGGCTCATCGGAGGTCGATGTGTAGGAGGAAGCCGTTGTTGGAGACCATTGTTGAAGAGCCGATCTCTTCTAGATGATTTCGGAATAAATATTTGATTTATTTTTTTACTTTTAGATTTGGGTTTATTTTTTCGATGTTAGTAAAAAAGGAAAACTCATTTGTTAATTGATTTGGATTATGGAAAAAAGAACGATAAAATATTTGTGCAAAACTAG

mRNA sequence

AAAAAAAGGATTGATTTCCACTCTATAATTCAAATACGGAAATACCCACAAATTAAAATCTCTTATTTAGTGAAATTCTGTACATTTCGACATTGATTCATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATCGGCGGCAAGGGCTCGAGTTCTGCGGCGGCGACGGTGGTTTTCCCGAGCGGGGAAATACGGCGGTTTCACGAACAAGTAAAAGCGGCGGAGCTGATGTTTGAAACGCCGAATTTCTTCGTTGTGAATTCTCAATCGGTTAATGTTGGCCGGAGATTTTCGGCTCTGACGGCAGATGAGGATTTGGAAATGGGGAATTTGTATGTTATGTTTCCGATGAAGAAGGTGAATTCGGTGGTATCGGTGGCGGACATGGGGGCGTTGTTCCTCACCGGCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATCGTGGGCGGTGGAGAATCTGATGTTTGTGTTTGGCCGGCGGTGGAGGCAGATGAGTCGGAGGAGAAGTTGAAATTGGATGATGATGTGGAGGAGTTTTCGCCGGCGCCGGAATTGGCTCATCGGAGGTCGATGTGTAGGAGGAAGCCGTTGTTGGAGACCATTGTTGAAGAGCCGATCTCTTCTAGATGATTTCGGAATAAATATTTGATTTATTTTTTTACTTTTAGATTTGGGTTTATTTTTTCGATGTTAGTAAAAAAGGAAAACTCATTTGTTAATTGATTTGGATTATGGAAAAAAGAACGATAAAATATTTGTGCAAAACTAG

Coding sequence (CDS)

ATGGGGAATTACATTTCTTGTACGCTTTCGACTCCAATCGGCGGCAAGGGCTCGAGTTCTGCGGCGGCGACGGTGGTTTTCCCGAGCGGGGAAATACGGCGGTTTCACGAACAAGTAAAAGCGGCGGAGCTGATGTTTGAAACGCCGAATTTCTTCGTTGTGAATTCTCAATCGGTTAATGTTGGCCGGAGATTTTCGGCTCTGACGGCAGATGAGGATTTGGAAATGGGGAATTTGTATGTTATGTTTCCGATGAAGAAGGTGAATTCGGTGGTATCGGTGGCGGACATGGGGGCGTTGTTCCTCACCGGCGAGCGGGTCTCCGGCGGGAAGAAGCGGCGGATCGTGGGCGGTGGAGAATCTGATGTTTGTGTTTGGCCGGCGGTGGAGGCAGATGAGTCGGAGGAGAAGTTGAAATTGGATGATGATGTGGAGGAGTTTTCGCCGGCGCCGGAATTGGCTCATCGGAGGTCGATGTGTAGGAGGAAGCCGTTGTTGGAGACCATTGTTGAAGAGCCGATCTCTTCTAGATGA

Protein sequence

MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVNVGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGESDVCVWPAVEADESEEKLKLDDDVEEFSPAPELAHRRSMCRRKPLLETIVEEPISSR

Homology

[Close]

BLAST of Sed0022544.1 vs. NCBI nr
Match: XP_038876498.1 (uncharacterized protein LOC120068930 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.5e-75
Identity = 150/183 (81.97%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNYISCTLSTPIGGK S+S+  TV+FPSG+IR FHE VKAAELMFE PNFF+VNSQSV 
Sbjct: 1   MGNYISCTLSTPIGGKPSTSSTTTVIFPSGQIRHFHEPVKAAELMFEIPNFFLVNSQSVQ 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           +GRRFSAL ADE+LEMGNLYVMFPMKKVNSVVSVADMGALFL  ERVSGGKKRRI+GGGE
Sbjct: 61  LGRRFSALMADENLEMGNLYVMFPMKKVNSVVSVADMGALFLAAERVSGGKKRRIIGGGE 120

Query: 121 SDVCVWPAVEADESEEKLKL-----DDDVEEFSPAPELAHRRSMCR-RKPLLETIVEEPI 178
           S+VCVWP VEADES+ KLKL     DDDV+ FSPAPE  HRRSMCR RKPLLETIVEEPI
Sbjct: 121 SNVCVWPEVEADESKPKLKLDGGDDDDDVKGFSPAPEFTHRRSMCRSRKPLLETIVEEPI 180

[Close]

BLAST of Sed0022544.1 vs. NCBI nr
Match: XP_023534199.1 (uncharacterized protein LOC111795830 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.7e-72
Identity = 145/177 (81.92%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+SCTL TPIG K SS  A TVVFPSGE+R+FHE VKAAELMFE P+FFVVNSQSV 
Sbjct: 1   MGNYVSCTLPTPIGRKPSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           VGRRFSAL ADEDLEMGNLYVMFPMKKVNSVVSV DMG L L  ERVSG KKRRIVGGGE
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGVLLLAAERVSGRKKRRIVGGGE 120

Query: 121 SDVCVWPAVEADESEEKLKLDDDVEEFSPAPELAHRRSMCR-RKPLLETIVEEPISS 177
           S+VCV P VEA+ESE KLK+DDDVE FSP PELAHRR+MCR RKPLLETIVEEP+ S
Sbjct: 121 SNVCVCPKVEAEESEMKLKMDDDVERFSPVPELAHRRTMCRLRKPLLETIVEEPMCS 177

[Close]

BLAST of Sed0022544.1 vs. NCBI nr
Match: XP_022959522.1 (uncharacterized protein LOC111460504 [Cucurbita moschata] >KAG6602038.1 hypothetical protein SDJN03_07271, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032732.1 hypothetical protein SDJN02_06782, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 144/177 (81.36%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+SCTLSTPIG K SS  A TVVFPSGE+R+FHE VKAAELMFE P+FFVVNSQSV 
Sbjct: 1   MGNYVSCTLSTPIGRKSSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           VGRRFSAL ADEDLEMGNLYVMFPMKKVNSVVSV DMG L L  ERVS  KKRRIVGGGE
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGVLLLAAERVSDRKKRRIVGGGE 120

Query: 121 SDVCVWPAVEADESEEKLKLDDDVEEFSPAPELAHRRSMCR-RKPLLETIVEEPISS 177
           S+VCV P VEA+ESE KLK+DD+VE FSP PELAHRR+MCR RKPLLETIVEEP+ S
Sbjct: 121 SNVCVCPKVEAEESEMKLKMDDEVERFSPVPELAHRRTMCRLRKPLLETIVEEPMCS 177

[Close]

BLAST of Sed0022544.1 vs. NCBI nr
Match: XP_011656216.1 (uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical protein Csa_008425 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 143/185 (77.30%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNYISCTLST IGGK S+S+  TV+FPSG+IR FHE +KAAELMFE PNFF+VNSQS++
Sbjct: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           +GRRFSAL ADEDLEMGNLY+MFPM KVNSVVSVADMGALFL  ERVSGGKKRRIVGGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120

Query: 121 SDVCVWPAVEADESEEKLKL-------DDDVEEFSPAPELAHRRSMCR-RKPLLETIVEE 178
           S VCVWP VE +ES+ KLKL       DDD+E FSP PE AHRRSMCR RKPLLETI EE
Sbjct: 121 STVCVWPEVETEESKPKLKLDGGDDEDDDDLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180

[Close]

BLAST of Sed0022544.1 vs. NCBI nr
Match: XP_022990804.1 (uncharacterized protein LOC111487586 [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 2.0e-70
Identity = 144/177 (81.36%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+SCTLSTPIG K SS  A TVVFPSGE+R+FHE VKAAELMFE P+FFVVNSQSV 
Sbjct: 1   MGNYVSCTLSTPIGRKPSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           VGRRFSAL ADEDLEMGNLYVMFPMKKVNSVVSV DMGAL L  ERVSG KKRRIVGGGE
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALLLAAERVSGRKKRRIVGGGE 120

Query: 121 SDVCVWPAVEADESEEKLKLDDDVEEFSPAPELAHRRSMCR-RKPLLETIVEEPISS 177
           S+V V P VEA+ESE KLK+D DVE FSP PELAHRR+MCR +KPLLETIVEEP+ S
Sbjct: 121 SNVRVCPKVEAEESEMKLKMDGDVEGFSPVPELAHRRTMCRLKKPLLETIVEEPMCS 177

[Close]

BLAST of Sed0022544.1 vs. ExPASy TrEMBL
Match: A0A0A0KN52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416270 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.2e-72
Identity = 143/185 (77.30%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNYISCTLST IGGK S+S+  TV+FPSG+IR FHE +KAAELMFE PNFF+VNSQS++
Sbjct: 1   MGNYISCTLSTSIGGKSSTSSTTTVIFPSGQIRHFHESLKAAELMFEIPNFFLVNSQSLH 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           +GRRFSAL ADEDLEMGNLY+MFPM KVNSVVSVADMGALFL  ERVSGGKKRRIVGGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMNKVNSVVSVADMGALFLAAERVSGGKKRRIVGGGD 120

Query: 121 SDVCVWPAVEADESEEKLKL-------DDDVEEFSPAPELAHRRSMCR-RKPLLETIVEE 178
           S VCVWP VE +ES+ KLKL       DDD+E FSP PE AHRRSMCR RKPLLETI EE
Sbjct: 121 STVCVWPEVETEESKPKLKLDGGDDEDDDDLEGFSPVPEFAHRRSMCRSRKPLLETIAEE 180

[Close]

BLAST of Sed0022544.1 vs. ExPASy TrEMBL
Match: A0A6J1H4S2 (uncharacterized protein LOC111460504 OS=Cucurbita moschata OX=3662 GN=LOC111460504 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.2e-72
Identity = 144/177 (81.36%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+SCTLSTPIG K SS  A TVVFPSGE+R+FHE VKAAELMFE P+FFVVNSQSV 
Sbjct: 1   MGNYVSCTLSTPIGRKSSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           VGRRFSAL ADEDLEMGNLYVMFPMKKVNSVVSV DMG L L  ERVS  KKRRIVGGGE
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGVLLLAAERVSDRKKRRIVGGGE 120

Query: 121 SDVCVWPAVEADESEEKLKLDDDVEEFSPAPELAHRRSMCR-RKPLLETIVEEPISS 177
           S+VCV P VEA+ESE KLK+DD+VE FSP PELAHRR+MCR RKPLLETIVEEP+ S
Sbjct: 121 SNVCVCPKVEAEESEMKLKMDDEVERFSPVPELAHRRTMCRLRKPLLETIVEEPMCS 177

[Close]

BLAST of Sed0022544.1 vs. ExPASy TrEMBL
Match: A0A6J1JT13 (uncharacterized protein LOC111487586 OS=Cucurbita maxima OX=3661 GN=LOC111487586 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.7e-71
Identity = 144/177 (81.36%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+SCTLSTPIG K SS  A TVVFPSGE+R+FHE VKAAELMFE P+FFVVNSQSV 
Sbjct: 1   MGNYVSCTLSTPIGRKPSSFPATTVVFPSGEVRQFHEPVKAAELMFEMPSFFVVNSQSVR 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           VGRRFSAL ADEDLEMGNLYVMFPMKKVNSVVSV DMGAL L  ERVSG KKRRIVGGGE
Sbjct: 61  VGRRFSALMADEDLEMGNLYVMFPMKKVNSVVSVTDMGALLLAAERVSGRKKRRIVGGGE 120

Query: 121 SDVCVWPAVEADESEEKLKLDDDVEEFSPAPELAHRRSMCR-RKPLLETIVEEPISS 177
           S+V V P VEA+ESE KLK+D DVE FSP PELAHRR+MCR +KPLLETIVEEP+ S
Sbjct: 121 SNVRVCPKVEAEESEMKLKMDGDVEGFSPVPELAHRRTMCRLKKPLLETIVEEPMCS 177

[Close]

BLAST of Sed0022544.1 vs. ExPASy TrEMBL
Match: A0A5D3DT24 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002630 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.8e-70
Identity = 140/183 (76.50%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNYISCTLSTPIG K SSS+  TV+FPSG+IR FHE VKAAELMFE PNFF+VNSQS++
Sbjct: 1   MGNYISCTLSTPIGAKPSSSSTTTVIFPSGQIRHFHESVKAAELMFEIPNFFLVNSQSLH 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           +GRRFSAL ADEDLEMGNLY+MFPMKKVNSVVSVADMGALFL  ERVSGG KRRI+GGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMKKVNSVVSVADMGALFLAAERVSGGNKRRIIGGGD 120

Query: 121 SDVCVWPAVEADESEEKLKL---------DDDVEEFSPAPELAHRRSMCR-RKPLLETIV 174
           S VCVWP VE +ES+ KL L         DDDVE FSP PE  HRRSMCR RKPLLETI 
Sbjct: 121 STVCVWPEVETEESKPKLNLDGSGGSDEDDDDVEGFSPVPEFGHRRSMCRSRKPLLETIA 180

[Close]

BLAST of Sed0022544.1 vs. ExPASy TrEMBL
Match: A0A1S3CCM8 (uncharacterized protein LOC103499309 OS=Cucumis melo OX=3656 GN=LOC103499309 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.8e-70
Identity = 141/187 (75.40%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNYISCTLSTPIG K SSS+  TV+FPSG+IR FHE VKAAELMFE PNFF+VNSQS++
Sbjct: 1   MGNYISCTLSTPIGVKPSSSSTTTVIFPSGQIRHFHESVKAAELMFEIPNFFLVNSQSLH 60

Query: 61  VGRRFSALTADEDLEMGNLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGGGE 120
           +GRRFSAL ADEDLEMGNLY+MFPMKKVNSVVSVADMGALFL  ERVSG  KRRI+GGG+
Sbjct: 61  LGRRFSALMADEDLEMGNLYLMFPMKKVNSVVSVADMGALFLAAERVSGRNKRRIIGGGD 120

Query: 121 SDVCVWPAVEADESEEKLKL---------DDDVEEFSPAPELAHRRSMCR-RKPLLETIV 178
           S VCVWP VE +ES+ KL L         DDDVE FSP PE  HRRSMCR RKPLLETI 
Sbjct: 121 STVCVWPEVETEESKPKLNLDGSGGSDEDDDDVEGFSPVPEFGHRRSMCRSRKPLLETIA 180

[Close]

BLAST of Sed0022544.1 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 77/192 (40.10%), Postives = 112/192 (58.33%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+S  LS       SSS+AA V+ P G +R  H  +KAAELM E P+FF+V+++S+ 
Sbjct: 1   MGNYVSSALSKT---SSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLK 60

Query: 61  VGRRFSALTADEDLEMG--NLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGG 120
           +GR+F  L AD+DL++   ++YV FPM +  S  + +D+  LF+  ++    ++R  VG 
Sbjct: 61  IGRKFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKK----QRRHRVGS 120

Query: 121 GESDVC---------VWPAVEADE-----SEEKLKLDDDVEEFSPAPELAHRRSMCR-RK 176
             S            V P  E D+     +  KL L +D+EEFS A E  HR S+ + +K
Sbjct: 121 DHSSAAVKHCHNNGRVSPDGEGDDVKVISAGSKLNL-EDIEEFS-AAEFMHRISVSKSKK 180

[Close]

BLAST of Sed0022544.1 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 2.5e-26
Identity = 76/183 (41.53%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 1   MGNYISCTLSTPIGGKGSSSAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVN 60
           MGNY+SC L+     K SSS  A V+ P G +R  H   KAAELM E P++F+V+++SV 
Sbjct: 1   MGNYVSCALN-----KTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVK 60

Query: 61  VGRRFSALTADEDLEMG--NLYVMFPMKKVNSVVSVADMGALFLTGERVSGGKKRRIVGG 120
           VGR+F  L AD+DL++G  ++YV FPM +  S  + +DM  L+LTG       K+R    
Sbjct: 61  VGRKFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTG-------KKRTKNC 120

Query: 121 GESDVCVWPAVEADESEE------KLKLDDDVEEFSPAPELAHRRSMCR-RKPLLETIVE 175
           G   V    + E +++++      KL L +D+EEFS A E  HR S+ + +KP LETI E
Sbjct: 121 GHRRV----SPENEDNDDVRLIGPKLNL-EDIEEFS-AAEFIHRISVSKSKKPQLETIAE 165

[Close]

BLAST of Sed0022544.1 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06
Identity = 33/125 (26.40%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 21  AAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVNVGRRFSALTADEDLEMGNLY 80
           A A ++   G +  F   VK   ++ + P  F+ NS  ++     +A++ADE+L++G +Y
Sbjct: 13  ATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQLGQIY 72

Query: 81  VMFPMKKVNSVVSVADMGALFL--TGERVSGGKKRRIVGGGESDVCVWPAVEADESEEKL 140
              P+  +   +   +M AL +  +   + GG      GGG    CV P V +D+   ++
Sbjct: 73  FALPLCWLRQPLKAEEMAALAVKASSALMRGG------GGGCRRKCVEPIV-SDKLRMRV 130

Query: 141 KLDDD 144
              DD
Sbjct: 133 GSGDD 130

[Close]

BLAST of Sed0022544.1 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 6.3e-06
Identity = 22/80 (27.50%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 21  AAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVNVGRRFSALTADEDLEMGNLY 80
           A A ++   G +  F   VK   ++ + P  F+ NS  ++     SA++ADE+ ++G LY
Sbjct: 13  ATAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAISADEEFQLGQLY 72

Query: 81  VMFPMKKVNSVVSVADMGAL 101
              P+  ++  +   +M AL
Sbjct: 73  FALPLSSLHHSLKAEEMAAL 92

[Close]

BLAST of Sed0022544.1 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.8e-05
Identity = 23/81 (28.40%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 20  SAAATVVFPSGEIRRFHEQVKAAELMFETPNFFVVNSQSVNVGRRFSALTADEDLEMGNL 79
           S +A ++   G ++ F   VK  +++ + P  FV NS  ++     SA+  +E+L  G L
Sbjct: 12  SDSAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQL 71

Query: 80  YVMFPMKKVNSVVSVADMGAL 101
           Y + P+  +N  +   +M AL
Sbjct: 72  YFVLPLTWLNHPLRAEEMAAL 92

The following BLAST results are available for this feature:

BLAST of Sed0022544.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876498.1	3.5e-75	81.97	uncharacterized protein LOC120068930 [Benincasa hispida]	[more]
XP_023534199.1	3.7e-72	81.92	uncharacterized protein LOC111795830 [Cucurbita pepo subsp. pepo]	[more]
XP_022959522.1	1.1e-71	81.36	uncharacterized protein LOC111460504 [Cucurbita moschata] >KAG6602038.1 hypothet...	[more]
XP_011656216.1	1.1e-71	77.30	uncharacterized protein LOC105435675 [Cucumis sativus] >KGN51040.1 hypothetical ...	[more]
XP_022990804.1	2.0e-70	81.36	uncharacterized protein LOC111487586 [Cucurbita maxima]	[more]

BLAST of Sed0022544.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0022544.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN52	5.2e-72	77.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G416270 PE=4 SV=1	[more]
A0A6J1H4S2	5.2e-72	81.36	uncharacterized protein LOC111460504 OS=Cucurbita moschata OX=3662 GN=LOC1114605...	[more]
A0A6J1JT13	9.7e-71	81.36	uncharacterized protein LOC111487586 OS=Cucurbita maxima OX=3661 GN=LOC111487586...	[more]
A0A5D3DT24	2.8e-70	76.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CCM8	2.8e-70	75.40	uncharacterized protein LOC103499309 OS=Cucumis melo OX=3656 GN=LOC103499309 PE=...	[more]

BLAST of Sed0022544.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17350.1	1.1e-26	40.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G03280.1	2.5e-26	41.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	2.8e-06	26.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT2G23690.1	6.3e-06	27.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	1.8e-05	28.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..171 e-value: 5.2E-31 score: 108.5
None	No IPR available	PANTHER	PTHR33052:SF95	DUF4228 DOMAIN PROTEIN	coord: 1..174
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..174

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0022544	Sed0022544	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022544.1-five_prime_utr	Sed0022544.1-five_prime_utr-LG01:30842343..30842441	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022544.1-exon	Sed0022544.1-exon-LG01:30842343..30843114	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022544.1-cds	Sed0022544.1-cds-LG01:30842442..30842975	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0022544.1-three_prime_utr	Sed0022544.1-three_prime_utr-LG01:30842976..30843114	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0022544.1	Sed0022544.1-protein	polypeptide