Sed0021831.1 (mRNA) Chayote v1

Overview


Name	Sed0021831.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	ABC transporter C family member 2
Location	LG10: 505648 .. 505995 (-)
Sequence length	348
RNA-Seq Expression	Sed0021831.1
Synteny	Sed0021831.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTGAGCCGCTTGTTTGGTATTGTCGACCAGTTGCTGGTGGCGTGTGGACGAAGGCTGTGGAGAATGCTCTTGGCTCTTACACACCATGTGCCATTGACTCTTTAGTTATTGTTATTTCTCATTTGGTCATTCTAGGTCTATGTATCTACAGAATATGGCTGATGAAGAAGGATTTTAAAGCACAGAGGTTTTGTTTGAGGTCAAAGATATACAACTATCTTCTGTGTTTATTGGCTGCTTACTGCATATTTGAGCCTTTATTCAGACTGATCAAGGGAATTTCAATCTTGAATTTAGATGGGCAGGTTGCACTTGCTCCCTTCGAGGTAGAGTTCTCTTAA

mRNA sequence

ATGGCTTTTGAGCCGCTTGTTTGGTATTGTCGACCAGTTGCTGGTGGCGTGTGGACGAAGGCTGTGGAGAATGCTCTTGGCTCTTACACACCATGTGCCATTGACTCTTTAGTTATTGTTATTTCTCATTTGGTCATTCTAGGTCTATGTATCTACAGAATATGGCTGATGAAGAAGGATTTTAAAGCACAGAGGTTTTGTTTGAGGTCAAAGATATACAACTATCTTCTGTGTTTATTGGCTGCTTACTGCATATTTGAGCCTTTATTCAGACTGATCAAGGGAATTTCAATCTTGAATTTAGATGGGCAGGTTGCACTTGCTCCCTTCGAGGTAGAGTTCTCTTAA

Coding sequence (CDS)

ATGGCTTTTGAGCCGCTTGTTTGGTATTGTCGACCAGTTGCTGGTGGCGTGTGGACGAAGGCTGTGGAGAATGCTCTTGGCTCTTACACACCATGTGCCATTGACTCTTTAGTTATTGTTATTTCTCATTTGGTCATTCTAGGTCTATGTATCTACAGAATATGGCTGATGAAGAAGGATTTTAAAGCACAGAGGTTTTGTTTGAGGTCAAAGATATACAACTATCTTCTGTGTTTATTGGCTGCTTACTGCATATTTGAGCCTTTATTCAGACTGATCAAGGGAATTTCAATCTTGAATTTAGATGGGCAGGTTGCACTTGCTCCCTTCGAGGTAGAGTTCTCTTAA

Protein sequence

MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKDFKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEVEFS

Homology

[Close]

BLAST of Sed0021831.1 vs. NCBI nr
Match: XP_023004008.1 (ABC transporter C family member 2-like [Cucurbita maxima] >XP_023004009.1 ABC transporter C family member 2-like [Cucurbita maxima] >XP_023004010.1 ABC transporter C family member 2-like [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWTKAVENALG+YTPCAIDS+VIVISHLVILGLCI RIWL+KKD
Sbjct: 1   MAFEPFVWYCRPVAGGVWTKAVENALGAYTPCAIDSVVIVISHLVILGLCINRIWLIKKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKAQRFCL+SKIYNY+LCLLAAYC+FEPL+RLI+GIS+LNLDGQ ALAPFEV
Sbjct: 61  FKAQRFCLKSKIYNYVLCLLAAYCVFEPLYRLIRGISVLNLDGQGALAPFEV 112

[Close]

BLAST of Sed0021831.1 vs. NCBI nr
Match: XP_023518650.1 (ABC transporter C family member 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWTKAVENALG+YTPCAIDS+VIVISHLVILGLCI RIWL+KKD
Sbjct: 1   MAFEPFVWYCRPVAGGVWTKAVENALGAYTPCAIDSVVIVISHLVILGLCINRIWLIKKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKAQRFCL+SKIYNY+LCLLAAYC+FEPL+RLI+GIS+LNLDGQ ALAPFEV
Sbjct: 61  FKAQRFCLKSKIYNYVLCLLAAYCVFEPLYRLIRGISVLNLDGQGALAPFEV 112

[Close]

BLAST of Sed0021831.1 vs. NCBI nr
Match: XP_022926385.1 (ABC transporter C family member 2 [Cucurbita moschata] >XP_022926386.1 ABC transporter C family member 2 [Cucurbita moschata] >XP_022926387.1 ABC transporter C family member 2 [Cucurbita moschata])

HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWTKAVENALG+YTPCAIDS+VIVISHLVILGLCI RIWL+KKD
Sbjct: 1   MAFEPFVWYCRPVAGGVWTKAVENALGAYTPCAIDSVVIVISHLVILGLCINRIWLIKKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKAQRFCL+SKIYNY+LCLLAAYC+FEPL+RLI+GIS+LNLDGQ ALAPFEV
Sbjct: 61  FKAQRFCLKSKIYNYVLCLLAAYCVFEPLYRLIRGISVLNLDGQGALAPFEV 112

[Close]

BLAST of Sed0021831.1 vs. NCBI nr
Match: KAG7026435.1 (ABC transporter C family member 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 3.0e-51
Identity = 99/112 (88.39%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWTKAVENALG+YTPCAIDS+VIVISHLVILGLCI RIWL+KKD
Sbjct: 1   MAFEPFVWYCRPVAGGVWTKAVENALGAYTPCAIDSVVIVISHLVILGLCINRIWLIKKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKA RFCL+SKIYNY+LCLLAAYC+FEPL+RLI+GIS+LNLDGQ ALAPFEV
Sbjct: 61  FKAHRFCLKSKIYNYVLCLLAAYCVFEPLYRLIRGISVLNLDGQSALAPFEV 112

[Close]

BLAST of Sed0021831.1 vs. NCBI nr
Match: XP_038881322.1 (ABC transporter C family member 2-like [Benincasa hispida] >XP_038881323.1 ABC transporter C family member 2-like [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 5.7e-50
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWT AVENALG+YTPCA+DS+VIVISHLV LGLCIYR WL+K D
Sbjct: 1   MAFEPFVWYCRPVAGGVWTTAVENALGAYTPCALDSVVIVISHLVFLGLCIYRTWLIKND 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKAQRFCL+SKIYNY+LCLLAAYC+FEPLFRLI+GISI NLDGQ AL+PFEV
Sbjct: 61  FKAQRFCLKSKIYNYMLCLLAAYCVFEPLFRLIRGISIFNLDGQDALSPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy Swiss-Prot
Match: Q42093 (ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-35
Identity = 72/111 (64.86%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FE + WYC+PV  GVWTK V NA G+YTPCA DS V+ IS LV+L LC+YRIWL  KD
Sbjct: 1   MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFE 112
            K +RFCLRS++YNY L LLAAY   EPLFRLI GIS+L+ DG   L PFE
Sbjct: 61  HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDGP-GLPPFE 110

[Close]

BLAST of Sed0021831.1 vs. ExPASy Swiss-Prot
Match: Q9C8G9 (ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-34
Identity = 69/111 (62.16%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FEPL WYC+PV  GVWTK V+ A G+YTPCAIDS V+ ISHLV+L LC+YR+WL+ KD
Sbjct: 1   MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFE 112
            K  +FCLRSK ++Y L LLAAY   EPLFRL+  IS+L+LDG     P+E
Sbjct: 61  HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYE 110

[Close]

BLAST of Sed0021831.1 vs. ExPASy Swiss-Prot
Match: Q9C8H0 (ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.6e-33
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FE L WYC+PVA G W KAV+ A G+YTPCAIDSLV+++SH V+LGLC YRIW++  +
Sbjct: 1   MGFEALNWYCKPVADGFWEKAVDGAFGAYTPCAIDSLVMLVSHFVLLGLCFYRIWIIFHN 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
            KAQ + LR K YN +L LLA YC+ EP+ RL+ GIS+ ++D +    PFEV
Sbjct: 61  TKAQIYVLRKKYYNCVLGLLACYCVVEPVLRLVMGISLFDMDEETDFPPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy Swiss-Prot
Match: Q9C8H1 (ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 8.3e-28
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FE L WYC+P+A G W K  + A G+YTPCAIDSLV+++S+ V+LGLC YRIW+   +
Sbjct: 1   MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
            KAQ + LR   Y+ +L +LA  C+ EP+ RL+ GIS+ ++  +  L PFEV
Sbjct: 61  AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy TrEMBL
Match: A0A6J1KUZ1 (ABC transporter C family member 2-like OS=Cucurbita maxima OX=3661 GN=LOC111497451 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.0e-52
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWTKAVENALG+YTPCAIDS+VIVISHLVILGLCI RIWL+KKD
Sbjct: 1   MAFEPFVWYCRPVAGGVWTKAVENALGAYTPCAIDSVVIVISHLVILGLCINRIWLIKKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKAQRFCL+SKIYNY+LCLLAAYC+FEPL+RLI+GIS+LNLDGQ ALAPFEV
Sbjct: 61  FKAQRFCLKSKIYNYVLCLLAAYCVFEPLYRLIRGISVLNLDGQGALAPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy TrEMBL
Match: A0A6J1EES4 (ABC transporter C family member 2 OS=Cucurbita moschata OX=3662 GN=LOC111433549 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.0e-52
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVAGGVWTKAVENALG+YTPCAIDS+VIVISHLVILGLCI RIWL+KKD
Sbjct: 1   MAFEPFVWYCRPVAGGVWTKAVENALGAYTPCAIDSVVIVISHLVILGLCINRIWLIKKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FKAQRFCL+SKIYNY+LCLLAAYC+FEPL+RLI+GIS+LNLDGQ ALAPFEV
Sbjct: 61  FKAQRFCLKSKIYNYVLCLLAAYCVFEPLYRLIRGISVLNLDGQGALAPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy TrEMBL
Match: A0A0A0KKT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525360 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.6e-50
Identity = 95/112 (84.82%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVA GVWTKAVENALG+YTPCAIDS+VIVISHL+ILGLC+YR WL+K D
Sbjct: 1   MAFEPFVWYCRPVADGVWTKAVENALGAYTPCAIDSVVIVISHLIILGLCLYRTWLIKND 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FK QRFCL+SKIYNY+LCLLAAYC+FEPLFRLI+GIS+LNLDGQ AL PFEV
Sbjct: 61  FKTQRFCLKSKIYNYMLCLLAAYCVFEPLFRLIRGISVLNLDGQDALPPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy TrEMBL
Match: A0A5D3CN23 (ABC transporter C family member 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009470 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVA GVWTKAVENALG+YTPCA+DS+VIVISHL+ILGLC+YR WL+K D
Sbjct: 1   MAFEPFVWYCRPVADGVWTKAVENALGAYTPCAVDSVVIVISHLIILGLCLYRTWLIKND 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FK QRFCL+SK YNY+LCLLAAYC+FEPLFRLI+GIS+LNLDGQ AL PFEV
Sbjct: 61  FKTQRFCLKSKAYNYMLCLLAAYCVFEPLFRLIRGISVLNLDGQDALPPFEV 112

[Close]

BLAST of Sed0021831.1 vs. ExPASy TrEMBL
Match: A0A1S3AZ12 (ABC transporter C family member 2-like OS=Cucumis melo OX=3656 GN=LOC103484325 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 93/112 (83.04%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           MAFEP VWYCRPVA GVWTKAVENALG+YTPCA+DS+VIVISHL+ILGLC+YR WL+K D
Sbjct: 1   MAFEPFVWYCRPVADGVWTKAVENALGAYTPCAVDSVVIVISHLIILGLCLYRTWLIKND 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
           FK QRFCL+SK YNY+LCLLAAYC+FEPLFRLI+GIS+LNLDGQ AL PFEV
Sbjct: 61  FKTQRFCLKSKAYNYMLCLLAAYCVFEPLFRLIRGISVLNLDGQDALPPFEV 112

[Close]

BLAST of Sed0021831.1 vs. TAIR 10
Match: AT2G34660.1 (multidrug resistance-associated protein 2 )

HSP 1 Score: 149.1 bits (375), Expect = 2.2e-36
Identity = 72/111 (64.86%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FE + WYC+PV  GVWTK V NA G+YTPCA DS V+ IS LV+L LC+YRIWL  KD
Sbjct: 1   MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFE 112
            K +RFCLRS++YNY L LLAAY   EPLFRLI GIS+L+ DG   L PFE
Sbjct: 61  HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDGP-GLPPFE 110

[Close]

BLAST of Sed0021831.1 vs. TAIR 10
Match: AT2G34660.2 (multidrug resistance-associated protein 2 )

HSP 1 Score: 149.1 bits (375), Expect = 2.2e-36
Identity = 72/111 (64.86%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FE + WYC+PV  GVWTK V NA G+YTPCA DS V+ IS LV+L LC+YRIWL  KD
Sbjct: 1   MGFEFIEWYCKPVPNGVWTKQVANAFGAYTPCATDSFVLGISQLVLLVLCLYRIWLALKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFE 112
            K +RFCLRS++YNY L LLAAY   EPLFRLI GIS+L+ DG   L PFE
Sbjct: 61  HKVERFCLRSRLYNYFLALLAAYATAEPLFRLIMGISVLDFDGP-GLPPFE 110

[Close]

BLAST of Sed0021831.1 vs. TAIR 10
Match: AT1G30400.1 (multidrug resistance-associated protein 1 )

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 69/111 (62.16%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FEPL WYC+PV  GVWTK V+ A G+YTPCAIDS V+ ISHLV+L LC+YR+WL+ KD
Sbjct: 1   MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFE 112
            K  +FCLRSK ++Y L LLAAY   EPLFRL+  IS+L+LDG     P+E
Sbjct: 61  HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYE 110

[Close]

BLAST of Sed0021831.1 vs. TAIR 10
Match: AT1G30400.2 (multidrug resistance-associated protein 1 )

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 69/111 (62.16%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FEPL WYC+PV  GVWTK V+ A G+YTPCAIDS V+ ISHLV+L LC+YR+WL+ KD
Sbjct: 1   MGFEPLDWYCKPVPNGVWTKTVDYAFGAYTPCAIDSFVLGISHLVLLILCLYRLWLITKD 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFE 112
            K  +FCLRSK ++Y L LLAAY   EPLFRL+  IS+L+LDG     P+E
Sbjct: 61  HKVDKFCLRSKWFSYFLALLAAYATAEPLFRLVMRISVLDLDG-AGFPPYE 110

[Close]

BLAST of Sed0021831.1 vs. TAIR 10
Match: AT1G30420.1 (multidrug resistance-associated protein 12 )

HSP 1 Score: 124.4 bits (311), Expect = 5.9e-29
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 1   MAFEPLVWYCRPVAGGVWTKAVENALGSYTPCAIDSLVIVISHLVILGLCIYRIWLMKKD 60
           M FE L WYC+P+A G W K  + A G+YTPCAIDSLV+++S+ V+LGLC YRIW+   +
Sbjct: 1   MGFEALNWYCKPIAEGFWEKTPDGAFGAYTPCAIDSLVMIVSNSVLLGLCFYRIWITLYN 60

Query: 61  FKAQRFCLRSKIYNYLLCLLAAYCIFEPLFRLIKGISILNLDGQVALAPFEV 113
            KAQ + LR   Y+ +L +LA  C+ EP+ RL+ GIS+ ++  +  L PFEV
Sbjct: 61  AKAQIYVLRKMYYHCVLWILACCCVVEPVLRLVMGISLFDMGDETDLPPFEV 112

The following BLAST results are available for this feature:

BLAST of Sed0021831.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004008.1	1.0e-51	89.29	ABC transporter C family member 2-like [Cucurbita maxima] >XP_023004009.1 ABC tr...	[more]
XP_023518650.1	1.0e-51	89.29	ABC transporter C family member 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022926385.1	1.0e-51	89.29	ABC transporter C family member 2 [Cucurbita moschata] >XP_022926386.1 ABC trans...	[more]
KAG7026435.1	3.0e-51	88.39	ABC transporter C family member 1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038881322.1	5.7e-50	85.71	ABC transporter C family member 2-like [Benincasa hispida] >XP_038881323.1 ABC t...	[more]

BLAST of Sed0021831.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42093	3.2e-35	64.86	ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 ...	[more]
Q9C8G9	2.0e-34	62.16	ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 ...	[more]
Q9C8H0	6.6e-33	57.14	ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=...	[more]
Q9C8H1	8.3e-28	50.00	ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=...	[more]

BLAST of Sed0021831.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KUZ1	5.0e-52	89.29	ABC transporter C family member 2-like OS=Cucurbita maxima OX=3661 GN=LOC1114974...	[more]
A0A6J1EES4	5.0e-52	89.29	ABC transporter C family member 2 OS=Cucurbita moschata OX=3662 GN=LOC111433549 ...	[more]
A0A0A0KKT9	3.6e-50	84.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525360 PE=4 SV=1	[more]
A0A5D3CN23	1.8e-49	83.04	ABC transporter C family member 2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AZ12	1.8e-49	83.04	ABC transporter C family member 2-like OS=Cucumis melo OX=3656 GN=LOC103484325 P...	[more]

BLAST of Sed0021831.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34660.1	2.2e-36	64.86	multidrug resistance-associated protein 2	[more]
AT2G34660.2	2.2e-36	64.86	multidrug resistance-associated protein 2	[more]
AT1G30400.1	1.5e-35	62.16	multidrug resistance-associated protein 1	[more]
AT1G30400.2	1.5e-35	62.16	multidrug resistance-associated protein 1	[more]
AT1G30420.1	5.9e-29	50.00	multidrug resistance-associated protein 12	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0021831	Sed0021831	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021831.1-cds	Sed0021831.1-cds-LG10:505648..505995	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0021831.1-exon	Sed0021831.1-exon-LG10:505648..505995	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0021831.1	Sed0021831.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding