Sed0021017.1 (mRNA) Chayote v1

Overview
NameSed0021017.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG01: 27138105 .. 27140159 (-)
Sequence length198
RNA-Seq ExpressionSed0021017.1
SyntenySed0021017.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGTTCTCCCGCTAGCAAATGGGAAGGAAGTGAAGTGGCCCTTACAAGGCTTGAGTCTCAAGTACTCAGAGGAGGATGAAATCTGATGGTGGTTTTGGCAAGGCGACGATGAAGAATTCTTTGGTGGCAAGTGTCTTTCTCGTGTCATTTGGAAGTTTCATTCATACACAATTGTTTCTTCGATGCCGATTAGAAGCGTAACTAATGAGGCAATGATTGAGGCTTTTAATGCATCGTCTGAAGTTTTTAGTAGTTATTTAAATCTTCTCTTCATGTCCGATTTTCAAGGTCGTAAGATTGTGCACTAAGAGTTTGGTGATTACAAGGGTGTTGCCAAGAGAGTTTTTTAGGCAATTTGCGAGAGTGTTGAGGTTCCTTAGGAAGATGATGTTCTTCGGCTAGGTGGTAAAAAATCTTACATAACGGTTTCTAATGTTGTTTATGTTACTTCTTTTTTGTCGACGAACCCTGATGATGAGGGTTGCCAAGCATTATGAAAATAATTCTTTTTAAATTGTGGTTATAAACACGCTCAAGTTGTTAAGGTGTAGTTAGGTTTTGATAATGTTTTCTGTAAGGATTGTATTAGAAAGAGTGATGGTTTATACATGGTTGAGCATGTAGAGATCGTGGAGCGTGGACAAGAAGTTTGAAAGCACTATTCACAGCACTATATAAATGAACCTTCGTCAACTAGATTGGGGGTTGGAGAATCGAGAGATGATCGACGACATTTACTTTCCAAGTTAAAGCTTTCTGTTAGTTTTGTCGTCTGCACTTAGCTATACTAGAGTGTTTTGCCCGGAGCTCAATTCATTCTGCAATTTTTACTGTGCCTTTTCATAGTGATATCACCAAAATTTCATTTATAATTTTTTTGTTTACTTGTTTATTTTGTTCATTCCATTTGGTGAGATTTGTATTCACCTCTCTTATTCATTTCCTTATATAAATGAAGACCTTTTTATATTTCACTCGTTACTTTAATTTTCTATGGCATTATGAGTAGCTAAATTCATTGTTGGAAGAAAATAAACAAGTAGAATAGTTTGCTAAAGCCTAAGAGGTAGGGAGATCTCAAATTATAAATGCATGTTGACTTAATTCTAAATAAATTTCGTTTGATCAACTATTTTTATTGACTTTATTTCGCATTCAATAGAAAATAAGTAAAGCGATCTTGCATGTTAAAACGCTAGGTTTGATAAGTTTTCGCTTACAATCTAAACAACACTTACAGATAAGGTTTTACTAGTGTTGTTTGCTCTGTAGATGATCTCAGTGCCAAAGTTCGAGATAACCGGAGTTAGAGTAAACAATAATTTTCTTTTCACCAAAAACACGTCATTGCGGTAGCGAAATATCTAAAATTCAATCTCATTTCAATGCTAGTTAAATTATCTATTAACAAACTTTCTTTATTTCGCTTGAACCAACTTAATTCTACACCTTAGTTTAGCTTCATTAATATTATTAGCCATTAATATTCTACACCTTAGTTTAGCTTAATTCTACAACTTAATTCTAAAAACCGAAAAACCGAACCGATCCACTTTTTAGTATATAATGGATCAACTGGTTTAAATTTTTAGAAAACCAAAAAAAATTGGTTCGGTTCGGTTTTGTATTGAAGAACCGATAACCGAACCGAACCGAGGGTATATATAACATAAAAAAAAACCCTAACTCTCTCATTTCATCTTCTGCCGTTTAACTCTGCCTCTCTAGTTTTTTCTACGCAAACCCTTTCTTCTCATTCTTTCGAAACCAACAGGCGACTCTTCTCTTCTTCTTCTTCATCTTTCTTTTTTATTTTCATCTTCTTCTTTTAGTTTCGATTTCAACCAACGCTTTCATCTTCTTCCTTTGAAAACCAACACCTTCCAACTTTGAATCGAACTGCCAAGGTGAGTTGTTCGTGCTTAGTTTGAGTTTGGAAACATTTGGAGCGGAGGAGCTATTGGGTGACTTTTTAATTTTGAATTTATTGAAGGTTCAAAATCTTTTATTTTGGAGAAGGCAGACGGTCGAAGTAGGAACGAATTTTTGA

mRNA sequence

ATGGCAGGTTCTCCCGCTAGCAAATGGGAAGGAAGTGAAGTGGCCCTTACAAGGCTTGAGTCTCAATTTCGATTTCAACCAACGCTTTCATCTTCTTCCTTTGAAAACCAACACCTTCCAACTTTGAATCGAACTGCCAAGGTTCAAAATCTTTTATTTTGGAGAAGGCAGACGGTCGAAGTAGGAACGAATTTTTGA

Coding sequence (CDS)

ATGGCAGGTTCTCCCGCTAGCAAATGGGAAGGAAGTGAAGTGGCCCTTACAAGGCTTGAGTCTCAATTTCGATTTCAACCAACGCTTTCATCTTCTTCCTTTGAAAACCAACACCTTCCAACTTTGAATCGAACTGCCAAGGTTCAAAATCTTTTATTTTGGAGAAGGCAGACGGTCGAAGTAGGAACGAATTTTTGA

Protein sequence

MAGSPASKWEGSEVALTRLESQFRFQPTLSSSSFENQHLPTLNRTAKVQNLLFWRRQTVEVGTNF
Homology
The following BLAST results are available for this feature:
BLAST of Sed0021017.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0021017.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0021017.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0021017.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0021017Sed0021017gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0021017.1-cdsSed0021017.1-cds-LG01:27138105..27138161CDS
Sed0021017.1-cdsSed0021017.1-cds-LG01:27138248..27138322CDS
Sed0021017.1-cdsSed0021017.1-cds-LG01:27140094..27140159CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0021017.1-exonSed0021017.1-exon-LG01:27138105..27138161exon
Sed0021017.1-exonSed0021017.1-exon-LG01:27138248..27138322exon
Sed0021017.1-exonSed0021017.1-exon-LG01:27140094..27140159exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0021017.1Sed0021017.1-proteinpolypeptide