Sed0020828.1 (mRNA) Chayote v1

Overview
NameSed0020828.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG10: 16630636 .. 16631150 (+)
Sequence length504
RNA-Seq ExpressionSed0020828.1
SyntenySed0020828.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAAGGACCTCGACAGCGGAGAAGGAAAAACTGGCTCGGTGAGGATGGCAATCCTCGTGCCTCGGTGCTGCAGCTGCGATTGCACCGCGAAGGCTCGCTGCTACGATACGGGCTGAGGATGTGGTATGCGTACTGGCGAAGGAGATGTGGTAAACAAGGGCTTACCTCTGTGCGGCTGCTGCGGTGCGGGTACGAGAAGGCGATCGATGTTGCGGCTGTGTTGCGGTGAGGTGTAGCGGCTGCGAAGGAGATCGCTCTTGCGAAGCGGTTGAGGGCAAGGCACGGATTCGAACCAACTCGACAACACCAGGAGAGGGAGTGAGTCTCGACCAGGGCTGCAAATCCAAGGCTTGCAAAGGGCCGCAATCGCAAGGCAAGGACGGCGATGCGATCGGCCAAAGGTGCTGCAGATCCTTGGTTGCGATGAAGGAAATCTCGACTGCCAATAGGGTGAGGTTCGCGGCCAAATTAAAAGAGTTTCACATACACAAGACAATAAACCTCGATTAG

mRNA sequence

ATGAAACAAGGACCTCGACAGCGGAGAAGGAAAAACTGGCTCGGTGAGGATGGCAATCCTCGTGCCTCGGTGCTGCAGCTGCGATTGCACCGCGAAGGCTCGCTGCTACGATACGGGCTGAGGATGTGGTATGCGTACTGGCGAAGGAGATGTGGTAAACAAGGGCTTACCTCTGTGCGGCTGCTGCGGTGCGGGTACGAGAAGGCGATCGATGTTGCGGCTGTGTTGCGCGGCTGCGAAGGAGATCGCTCTTGCGAAGCGGTTGAGGGCAAGGCACGGATTCGAACCAACTCGACAACACCAGGAGAGGGAGTGAGTCTCGACCAGGGCTGCAAATCCAAGGCTTGCAAAGGGCCGCAATCGCAAGGCAAGGACGGCGATGCGATCGGCCAAAGGTGCTGCAGATCCTTGGTTGCGATGAAGGAAATCTCGACTGCCAATAGGGTGAGGTTCGCGGCCAAATTAAAAGAGTTTCACATACACAAGACAATAAACCTCGATTAG

Coding sequence (CDS)

ATGAAACAAGGACCTCGACAGCGGAGAAGGAAAAACTGGCTCGGTGAGGATGGCAATCCTCGTGCCTCGGTGCTGCAGCTGCGATTGCACCGCGAAGGCTCGCTGCTACGATACGGGCTGAGGATGTGGTATGCGTACTGGCGAAGGAGATGTGGTAAACAAGGGCTTACCTCTGTGCGGCTGCTGCGGTGCGGGTACGAGAAGGCGATCGATGTTGCGGCTGTGTTGCGCGGCTGCGAAGGAGATCGCTCTTGCGAAGCGGTTGAGGGCAAGGCACGGATTCGAACCAACTCGACAACACCAGGAGAGGGAGTGAGTCTCGACCAGGGCTGCAAATCCAAGGCTTGCAAAGGGCCGCAATCGCAAGGCAAGGACGGCGATGCGATCGGCCAAAGGTGCTGCAGATCCTTGGTTGCGATGAAGGAAATCTCGACTGCCAATAGGGTGAGGTTCGCGGCCAAATTAAAAGAGTTTCACATACACAAGACAATAAACCTCGATTAG

Protein sequence

MKQGPRQRRRKNWLGEDGNPRASVLQLRLHREGSLLRYGLRMWYAYWRRRCGKQGLTSVRLLRCGYEKAIDVAAVLRGCEGDRSCEAVEGKARIRTNSTTPGEGVSLDQGCKSKACKGPQSQGKDGDAIGQRCCRSLVAMKEISTANRVRFAAKLKEFHIHKTINLD
Homology
The following BLAST results are available for this feature:
BLAST of Sed0020828.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0020828.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0020828.1 vs.
Match NameE-valueIdentityDescription
BLAST of Sed0020828.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0020828Sed0020828gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0020828.1-exonSed0020828.1-exon-LG10:16630636..16630865exon
Sed0020828.1-exonSed0020828.1-exon-LG10:16630877..16631150exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0020828.1-cdsSed0020828.1-cds-LG10:16630636..16630865CDS
Sed0020828.1-cdsSed0020828.1-cds-LG10:16630877..16631150CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0020828.1Sed0020828.1-proteinpolypeptide