Sed0020321.3 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCGTGAAGCCGAAGGAGAAACGATGGAAGCAAAAAGGCGATCGAAGATGAGGATCGCCATAATCCACCCCGACCTTGGTATAGGTAAGAACATCATCCAGTAATTCAATCGATAAATTTCGATCTACACCTCTTTTTCATTCTGTTGTTTGATTCTTTGTGTTTGATCGAATCGATTTGATTAGAAGTTTTGATTTCGAAATTGATTAGGTATTTAGTATGCTGTGGTGGATGCAGTGTAGGCGCATCAGTAAATGTTAATTGATTTTGTTCACATTATGTGGATTTGATTCTTATTTATGTTGATCTGTGTTGTTTCTCTTTTATCATAGGAAGTACGGAATTCTGGCCTGTTAACATGATAAATTTGAATTTATGATGTACGTTTATATGTTTGATTGTTATAGGTGAAACTGACTTACTTAGTTACTATGAGTTTTATACATCTTTCTTACTTTGTTGAGAATGCATTGGAAAAATTGAATTGGATTTAGTCCAACAGTATAAATAACTTTTTGAGCATGCTTTTGTTTTCTTTTCCATTTCTTCTTAATAGTTAATGGTTAACAAAACATCATGAAGTGACCTAGTGGTCGAGACTCGAGAGGGCTTTGAGGAATTAAGAGGCGATGAATTCAATCCATGGTGACCATCTACTTAGAAATTATTTACTACAGATTTTCTTGAAATTCAAATGTTATAGAGTCAAACGATATGTCTGGTTACAATAGTTGAGGTGGACGCAAGCTGGATGAATAGTCATGCATAAAGAAAAGAGTTAATGGTTAACATGTTAGAGTTACAGGTTAAAAAAACATTGAAAAGATTTAAATAACTTGGCCCAATTTTAAAATTCCATTTTAGTGGTTGATTTAACATACATTTCCATGGAATTTCATCAAAGGGAAGTTGTAATCTATGAATCATGGAGACGGACACAGATATGGGATACGGATACGACATGACACGGCTATACATCAATTTCTTAAAAACTAAGATACGGATACGTTTGAGATACAAAAATTTTACTAAAATAAAACGTATGCAATTGAATTCATGTTAGCTTTTTTCTTTTTATAATTTTACTTAATAAACATATGAAATTGAATTTCATTTTAGTAGCAATAAAATGGGTTCAATAAAATGAGAATAATGGACTCGGTTCACTAAAATGATAGTTTAATTTGGTGAATATAATGAGTTGGGCTCATAAAAATGACTGTTAAAAAATGCAAAAGCATTCTCACTCATCCTGGCCATTTGTTCTGCGTATCTTCCCGTGTCTAATAATTAAAATATAAAATAAAAAACCAGATACTTCAATTGCAGTATCTGATACGTATCTTAGGTGTAACTTGTCGTATCTGTATAGAATCTCTGCCCAAATTGGTGTGTCCGTGCTTTATAGGCTGTAATCAGTCATATTTTTTAGCTGACTTTTTACTGTCTGTTTCTATAGCTAATAAGTAAAAACAATGAAGTATTGGTTTCTGAAATATCATTCGAAAACGGAACAGCATGAAGGATAGATTTTTTAAGTCTGGGGATGCAGCTTTGGGAATAAAGCTAACGACCAACTGGAATTGATAAGAGTTGAGTTGCGTGCAAAGAGTAATTCTGAGATTCAGTCCACATTTTTATACTTAATGTTTTTAATATTATCATATCTTTGTCCAACTTTGAGTCTTGTTGAGTGTATTAAAACATTCTAATTTTACAGTCATAGGTAGCTATTAACGGGTTATTATGCATGCAGGTGGAGCTGAGAGATTGATTGTAGACGCCGCTGTTGAACTTTCTTCCCATGGACATGATGTCCATATTTTTACATCACACCATGACAAAAATCGGTGCTTTGAGGAGACTCTTTCTGGTGTGTTTCACTGCTTTTTATCTTCAATTGGATCTTTTGGATATAAAAAATGGAAATAATATATAACTTTCCACTGATGTTTTATCATTTATGTAGTTTAAAAATAGAAAAAATTTATAGAAGTTATTCTAGTATCTTTAAACTTAAGAAGTCTTAGTCTCAATTTGAACGGGGAAGAATGATGCATTTGTGTAGGATGAGGCTCAGATAAAGGAATAATATATCTATATATCGATTCTTTTTCTATGCCTAGTAGACACTTCTTTGCTGAGAAATTTCAACGGCCCCATTTTGCTTCTTTGATTGCTTCTTGTAATTTTCTTCCAATTTCTGCAATAGTGTCAATATCACATCGTTTCATTCTTATAAATTCATTTCTAGTTTTTCCCAGGCACTTTTCCAGTTTCTGTGTATGGCGATTTCCTACCTCGCCATATCTTTTACCGCCTCCATGCAGTATGCGCATATATACGGTGTATTTTTGTCACTCTCTGCATGCTGTTTATGTGGCCATCATTTGATGTCATACTAGCAGATCAGGTTTCTGTTGTTGTTCCACTACTTAAACTGAAAAGGTCATCAAAGGTATGGACTTTTTCCTTAAGTTGTTCAGATGTAACTTTTTCATGGCTGACCAAAGAAGCTGCATGCTTGTCCAGGTTGTATTTTATTGTCATTTTCCGGATCTGTTGCTGGCGAAACACACAACCATTTTGAGGAGGCTGTATAGAAAACCAATAGACTTACTTGAAGAACTGACAACTGGTTTGGTTTTTGACAATTCATTCTACTTCTTTTAATTCATATGTTGATTCAGTATTACATTCATTCATACTCTTCAATATTTACATTTATCACTTTCCATAACCACAGGGATGGCAGATTTGATACTGGTCAATAGCAAATTTACTGCATCCACTTTTGCCAATACTTTCAAACATCTCAATGCACGTGGAATTCAACCTGCTATTCTTTATCCAGCAGTCAATATAGATCAGTTTGATGAGCCCCACTCTTCGAAGTAACGAACATGTTTGTATATCTCTATATTTTTTTCAAAATTATTATTGTTTATTGTTAATGTACTCTGTTATATTCATTGCAATTCTTATAAATTCAATCATACCAGGTTGAGTTTTCTTTCCATCAACCGTTTTGAAAGGAAGAAAAACATTGAATTAGCTATTTCAGCCTTTGCTAAGATTGGCTCATCTGAAGAGGGCGTTCTTCAAGATTACAATGTAGCTGATGTTTTCTTGGTCATTGCTGGCAAGTCTCAACTTTTTCTCTAGTAATGTTCTATAGAAGTACTTGTCCATTACAAGTGTGATTGCTTGCTTGCTTGATGTATTGGAGAGCTCTTGGAAATGTTTTCTTTTTAAAAACCTCTAGTTATGCATTCATTTTGATTACTTTATAGAATAGGACGGGATTGTTTGAGATTTATCAATGGCTTTAGTACCTTGGCTCTTCTAAATATCAAGCCACAAATGTAGAATATTTTAATTATCATGGAGTGAACTAATGATCAAGAGGGTTTTGAGGAGCTAAGAGGTGATGGGTTCAATCCATGATGATCACCTACTTCGGAATTTATTTCTTACGAGTTTTTTCGACATCTAAATACTATAAGGTTAAGCAGTATGTTCTGTGACATTAGTCGAAGTGCATATAAATTGGCCTGAACAGTCACAAATGTAAAACATAAAAATCAAATGTAGAATGTGTTGAAACATGTAAATCATCGATCAATTCAAAAGCTTAAACTCAGGGTTGTAGTTAATTTAATTATATCAACCAATTTCATACACTCTGCATTGCTTCATTCAGAGTACTTTTGCGATTGTACAACGATGTTAAATATTTTTCACATTCTATTTCAGGAGGCTTCGATAAACGGCTAAGAGAGAATGTTGAGTACTTGGAGGAGCTCAAGAATTTAGCTGAAAGAGAAGGTGTATCAGAACGTGTTACCTTCATCACATCCTGCTCAACACTTGAAAGAAACGCCCTTCTTTCCCAATGTCTCTGTGTCATCTACACGCCGACGGTTTGTGCACCTCCCGTTACACGCTCATGATGCGATCCTTTCTTTTGTTCTTATAATATGAACTAATACCAAAAGAGTTAGTGGCCTAGTGATTTCATTGTTTAGTGGTAATCCAGTTCAATAACACAGTCATGGGTTTGATCTTGGAAAATGGTATTTAACTTTTATATTATTTAAGAACAGAAGTGCCCATTATGTAGGGTTTGTTGGTCCCCTCCTCCCAATTTGTACTTAAAAAAACAATGATATGAATTAAATTATTAATGCAGGACGAACACTTCGGCATTGTTCCTTTGGAAGCCATGGCAGCTTACAAGCCTGTTATCGCATGCAACAGCGGGGGTCCAGTCGAGACTATTAAAAATGGCGCGACCGGATTTCTTTGTTCGCCTAATCCTCAAGAGTTCTCTCTGGCAATGGCAAAACTCATTCAGGATCCAGAGATGGCAGCAAGAATGGGTAGGGAAGCCCGACAACACATCGTCGAATCTTTCTCGACAAAAATATTTGGCCAGCAACTTAACCAATACCTTGTCGATGTCGCTCACCTTAAGATAGACTGAAACTACAGATAAATTTAGTTGCAAGTGGATTAACGACCAGGTAATACACAACCTTTTGAAGCCTAACAACCTATATGGATCTTGCGTAAATTGGTAAAGTCAGACACACCAGTTACACAGATTTACTGCTTTGTTCTATGTATATGTATATTTATTGTGTATTGTTGTTTGGTCTCAGTAGAAGATGTGAATTAACTTCATTTCTGGCTGCAGTTTTATAACCTTCAAATTTTAATTGGTTTTAAATAATCAAGAAATAATTTGAGTT GTTTCGTGAAGCCGAAGGAGAAACGATGGAAGCAAAAAGGCGATCGAAGATGAGGATCGCCATAATCCACCCCGACCTTGGTATAGCTAATAAGTAAAAACAATGAAGTATTGGTTTCTGAAATATCATTCGAAAACGGAACAGCATGAAGGATAGATTTTTTAAGTCTGGGGATGCAGCTTTGGGAATAAAGCTAACGACCAACTGGAATTGATAAGAGTTGAGTTGCGTGCAAAGAGTAATTCTGAGATTCAGTCCACATTTTTATACTTAATGTTTTTAATATTATCATATCTTTGTCCAACTTTGAGTCTTGTTGAGTGTATTAAAACATTCTAATTTTACAGTCATAGGTAGCTATTAACGGGTTATTATGCATGCAGGTGGAGCTGAGAGATTGATTGTAGACGCCGCTGTTGAACTTTCTTCCCATGGACATGATGTCCATATTTTTACATCACACCATGACAAAAATCGGTGCTTTGAGGAGACTCTTTCTGTTTTTCCCAGGCACTTTTCCAGTTTCTGTGTATGGCGATTTCCTACCTCGCCATATCTTTTACCGCCTCCATGCAGTATGCGCATATATACGGTGTATTTTTGTCACTCTCTGCATGCTGTTTATGTGGCCATCATTTGATGTCATACTAGCAGATCAGGTTTCTGTTGTTGTTCCACTACTTAAACTGAAAAGGTCATCAAAGGTTGTATTTTATTGTCATTTTCCGGATCTGTTGCTGGCGAAACACACAACCATTTTGAGGAGGCTGTATAGAAAACCAATAGACTTACTTGAAGAACTGACAACTGGGATGGCAGATTTGATACTGGTCAATAGCAAATTTACTGCATCCACTTTTGCCAATACTTTCAAACATCTCAATGCACGTGGAATTCAACCTGCTATTCTTTATCCAGCAGTCAATATAGATCAGTTTGATGAGCCCCACTCTTCGAAGTTGAGTTTTCTTTCCATCAACCGTTTTGAAAGGAAGAAAAACATTGAATTAGCTATTTCAGCCTTTGCTAAGATTGGCTCATCTGAAGAGGGCGTTCTTCAAGATTACAATGTAGCTGATGTTTTCTTGGTCATTGCTGGAGGCTTCGATAAACGGCTAAGAGAGAATGTTGAGTACTTGGAGGAGCTCAAGAATTTAGCTGAAAGAGAAGGTGTATCAGAACGTGTTACCTTCATCACATCCTGCTCAACACTTGAAAGAAACGCCCTTCTTTCCCAATGTCTCTGTGTCATCTACACGCCGACGGACGAACACTTCGGCATTGTTCCTTTGGAAGCCATGGCAGCTTACAAGCCTGTTATCGCATGCAACAGCGGGGGTCCAGTCGAGACTATTAAAAATGGCGCGACCGGATTTCTTTGTTCGCCTAATCCTCAAGAGTTCTCTCTGGCAATGGCAAAACTCATTCAGGATCCAGAGATGGCAGCAAGAATGGGTAGGGAAGCCCGACAACACATCGTCGAATCTTTCTCGACAAAAATATTTGGCCAGCAACTTAACCAATACCTTGTCGATGTCGCTCACCTTAAGATAGACTGAAACTACAGATAAATTTAGTTGCAAGTGGATTAACGACCAGGTAATACACAACCTTTTGAAGCCTAACAACCTATATGGATCTTGCGTAAATTGGTAAAGTCAGACACACCAGTTACACAGATTTACTGCTTTGTTCTATGTATATGTATATTTATTGTGTATTGTTGTTTGGTCTCAGTAGAAGATGTGAATTAACTTCATTTCTGGCTGCAGTTTTATAACCTTCAAATTTTAATTGGTTTTAAATAATCAAGAAATAATTTGAGTT ATGGACATGATGTCCATATTTTTACATCACACCATGACAAAAATCGGTGCTTTGAGGAGACTCTTTCTGTTTTTCCCAGGCACTTTTCCAGTTTCTGTGTATGGCGATTTCCTACCTCGCCATATCTTTTACCGCCTCCATGCAGTATGCGCATATATACGGTGTATTTTTGTCACTCTCTGCATGCTGTTTATGTGGCCATCATTTGATGTCATACTAGCAGATCAGGTTTCTGTTGTTGTTCCACTACTTAAACTGAAAAGGTCATCAAAGGTTGTATTTTATTGTCATTTTCCGGATCTGTTGCTGGCGAAACACACAACCATTTTGAGGAGGCTGTATAGAAAACCAATAGACTTACTTGAAGAACTGACAACTGGGATGGCAGATTTGATACTGGTCAATAGCAAATTTACTGCATCCACTTTTGCCAATACTTTCAAACATCTCAATGCACGTGGAATTCAACCTGCTATTCTTTATCCAGCAGTCAATATAGATCAGTTTGATGAGCCCCACTCTTCGAAGTTGAGTTTTCTTTCCATCAACCGTTTTGAAAGGAAGAAAAACATTGAATTAGCTATTTCAGCCTTTGCTAAGATTGGCTCATCTGAAGAGGGCGTTCTTCAAGATTACAATGTAGCTGATGTTTTCTTGGTCATTGCTGGAGGCTTCGATAAACGGCTAAGAGAGAATGTTGAGTACTTGGAGGAGCTCAAGAATTTAGCTGAAAGAGAAGGTGTATCAGAACGTGTTACCTTCATCACATCCTGCTCAACACTTGAAAGAAACGCCCTTCTTTCCCAATGTCTCTGTGTCATCTACACGCCGACGGACGAACACTTCGGCATTGTTCCTTTGGAAGCCATGGCAGCTTACAAGCCTGTTATCGCATGCAACAGCGGGGGTCCAGTCGAGACTATTAAAAATGGCGCGACCGGATTTCTTTGTTCGCCTAATCCTCAAGAGTTCTCTCTGGCAATGGCAAAACTCATTCAGGATCCAGAGATGGCAGCAAGAATGGGTAGGGAAGCCCGACAACACATCGTCGAATCTTTCTCGACAAAAATATTTGGCCAGCAACTTAACCAATACCTTGTCGATGTCGCTCACCTTAAGATAGACTGA MDMMSIFLHHTMTKIGALRRLFLFFPGTFPVSVYGDFLPRHIFYRLHAVCAYIRCIFVTLCMLFMWPSFDVILADQVSVVVPLLKLKRSSKVVFYCHFPDLLLAKHTTILRRLYRKPIDLLEELTTGMADLILVNSKFTASTFANTFKHLNARGIQPAILYPAVNIDQFDEPHSSKLSFLSINRFERKKNIELAISAFAKIGSSEEGVLQDYNVADVFLVIAGGFDKRLRENVEYLEELKNLAEREGVSERVTFITSCSTLERNALLSQCLCVIYTPTDEHFGIVPLEAMAAYKPVIACNSGGPVETIKNGATGFLCSPNPQEFSLAMAKLIQDPEMAARMGREARQHIVESFSTKIFGQQLNQYLVDVAHLKID Homology
BLAST of Sed0020321.3 vs. NCBI nr
Match: KAG6600405.1 (Alpha-1,3/1,6-mannosyltransferase ALG2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 646.4 bits (1666), Expect = 1.6e-181 Identity = 323/350 (92.29%), Postives = 339/350 (96.86%), Query Frame = 0
BLAST of Sed0020321.3 vs. NCBI nr
Match: XP_008451762.1 (PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Cucumis melo]) HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181 Identity = 319/349 (91.40%), Postives = 337/349 (96.56%), Query Frame = 0
BLAST of Sed0020321.3 vs. NCBI nr
Match: XP_022981173.1 (alpha-1,3/1,6-mannosyltransferase ALG2 [Cucurbita maxima]) HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181 Identity = 322/350 (92.00%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of Sed0020321.3 vs. NCBI nr
Match: KAA0063056.1 (alpha-1,3/1,6-mannosyltransferase ALG2 [Cucumis melo var. makuwa]) HSP 1 Score: 645.2 bits (1663), Expect = 3.5e-181 Identity = 319/349 (91.40%), Postives = 337/349 (96.56%), Query Frame = 0
BLAST of Sed0020321.3 vs. NCBI nr
Match: XP_023517732.1 (alpha-1,3/1,6-mannosyltransferase ALG2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 644.8 bits (1662), Expect = 4.6e-181 Identity = 322/350 (92.00%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy Swiss-Prot
Match: Q9H553 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Homo sapiens OX=9606 GN=ALG2 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 3.5e-83 Identity = 167/351 (47.58%), Postives = 231/351 (65.81%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy Swiss-Prot
Match: Q7KWM5 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Dictyostelium discoideum OX=44689 GN=alg2 PE=3 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 2.5e-81 Identity = 161/358 (44.97%), Postives = 225/358 (62.85%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy Swiss-Prot
Match: Q9DBE8 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Mus musculus OX=10090 GN=Alg2 PE=1 SV=2) HSP 1 Score: 295.4 bits (755), Expect = 8.9e-79 Identity = 162/350 (46.29%), Postives = 222/350 (63.43%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy Swiss-Prot
Match: O94738 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Rhizomucor pusillus OX=4840 GN=ALG2 PE=1 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 4.7e-72 Identity = 157/373 (42.09%), Postives = 218/373 (58.45%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy Swiss-Prot
Match: Q59LF2 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ALG2 PE=3 SV=2) HSP 1 Score: 226.9 bits (577), Expect = 3.9e-58 Identity = 149/387 (38.50%), Postives = 210/387 (54.26%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy TrEMBL
Match: A0A6J1J1C7 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Cucurbita maxima OX=3661 GN=LOC111480394 PE=3 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 322/350 (92.00%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy TrEMBL
Match: A0A5A7V9D8 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001710 PE=3 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 319/349 (91.40%), Postives = 337/349 (96.56%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy TrEMBL
Match: A0A1S3BS74 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Cucumis melo OX=3656 GN=LOC103492951 PE=3 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 1.7e-181 Identity = 319/349 (91.40%), Postives = 337/349 (96.56%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy TrEMBL
Match: A0A6J1FWE8 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Cucurbita moschata OX=3662 GN=LOC111447959 PE=3 SV=1) HSP 1 Score: 644.0 bits (1660), Expect = 3.8e-181 Identity = 322/350 (92.00%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of Sed0020321.3 vs. ExPASy TrEMBL
Match: A0A6J1CMB7 (Alpha-1,3/1,6-mannosyltransferase ALG2 OS=Momordica charantia OX=3673 GN=LOC111012924 PE=3 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 6.0e-179 Identity = 313/349 (89.68%), Postives = 335/349 (95.99%), Query Frame = 0
BLAST of Sed0020321.3 vs. TAIR 10
Match: AT1G78800.1 (UDP-Glycosyltransferase superfamily protein ) HSP 1 Score: 538.9 bits (1387), Expect = 3.3e-153 Identity = 263/343 (76.68%), Postives = 302/343 (88.05%), Query Frame = 0
BLAST of Sed0020321.3 vs. TAIR 10
Match: AT4G10120.1 (Sucrose-phosphate synthase family protein ) HSP 1 Score: 46.2 bits (108), Expect = 6.7e-05 Identity = 50/212 (23.58%), Postives = 93/212 (43.87%), Query Frame = 0
BLAST of Sed0020321.3 vs. TAIR 10
Match: AT4G10120.2 (Sucrose-phosphate synthase family protein ) HSP 1 Score: 46.2 bits (108), Expect = 6.7e-05 Identity = 50/212 (23.58%), Postives = 93/212 (43.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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