Sed0018976.3 (mRNA) Chayote v1

Overview


Name	Sed0018976.3
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	iron-sulfur assembly protein IscA-like 2, mitochondrial
Location	LG01: 7882668 .. 7889409 (+)
Sequence length	2289
RNA-Seq Expression	Sed0018976.3
Synteny	Sed0018976.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGATTGCAATGAATATGTTGCAGTTTGTCTGAATCTACCAATTGTTTCATTGTAGCAAGATAGTTCACCGTTTTGGAGTCTATTTCCTAACAGTCTGAAAGACTTGATTTTTGTTTCTTTGAATCTTTGCTCATAGAAACCTTCCTTCCGTGTCTCTAGGTATAGTTTGTTATAATATAAAATTACTTGCAACTTTTGGGTCCAAACAGTGGTCCTGATAAAGCTTGGTATGCAGTAATTCATCTCTCAAACTGAGAATTGGGCATAAGTTCAACAATTGAGTTGTCTTTGATTGTTAGGGATAGTTATAAGCTTAGGTGGGCGAGATTTAATCCCAGAATGTATACATCCAGCCTCTGGCCTTTTGGAACAGCACAACATAGGATGAAGTTATTTTCATTGGGTTTTATGGATTGAGAGGAGTTAAGGAGTTTATTAAAGAATGAGGCTCTTGATTGAATCCCTGTTGTTGCAGGGATGGAGTTGGAGATTTTGTCAACTTTGGAGGTTTGAGGTGTCCCCACAGGACCACAAGAGTTCCTGAATGACCCATTGCTTTCCAGTATCCATGAGGTAAGACATGCACATGGGCAGCTAGGGGAAAAAGATTAGAGTAGGAGACGAAAAAAAGAAATCCAGAAAACTGAATCTGAAAAGGGGGTTGGGCTCATGATGGCTGATGTGCACAGGGCCAAGGCATATGCATGTGGGTTTTACTTCCTATTCTAAGCATTAAAAAAGAAGACAACACTTGGATGGAATCGGTTTGTCTGGTTTTCAGCTTTGAAAGACCAAAACTAATTCAAACATTCCTAAACTTATCGGTTTAGTATGTTCAGATTCACACCCCTGGTGAGAGTGGTGTGTTTTTGTTATGAAGGCCCATTTTGAAGATGGGTTCATGCATTTGGAACGAAATCTTGTCAAAATTCAGAAGGATAAAGACCTAGCTATAATTTCTCTTGAAAATGTAAGCATTTCTCTCTCTCCCTTTCATAGATTTGTCCTTTCTCTCTCCTCAAAAGTAATATTTAGATCAATATTGAATAGCTCGACTTTATGGATGCGTGTAGTGGAGAGTGAAGTTCCGATTTCCTGGTTAAAAAAATAGTCTTCAACACAACAACCATATGTAATATAAGAACACGCGAATTCCATTTTTACACCTATTAGAGTAGGATGGTTGGGAATTTAAGACATCCACATAAAAAATAGATCCTCTGTGGAGAACCTTGATCTATGTGAAATATGGTGATCTTGGAGCATTTTACAAGTCTGGAACACACCATCTTACAACATCAAAAGGTCCTGTTAGAACATTGACAAAGCTAAGTATCTAGTATATAAGAACATCACCCACAAGGTGGGTAGGGGAGAAGCTACTAGATTCTGGGAAGATTCATAGACAGAGAGTGGTGTTCTAAAAAATTGCTTCCCTCTCCTTTATCAATATCAATTATCTCTTAAGAAGTTAGCTTCTATTTATGATTTGTGGTCAGCAGAATACACAACTTGGAATCTCCATCTTAGATGCCAACTCATAGAAGCGATCTCGTCCTTTGAGAGTAGTAATTGTTCCGACAGATGCATTGGAAGCTACAGGAAGATGGGGTTTTCTCCTCGGGTTTCCTTGCAAAGCATGAATCTTCGAACTCTTTATCTGATAACAGGGAGATATTCTTGTCATTATGGTCTGGTCCCCAACCCAAAAAGATCAAATTTTTTGTTTGGGAGATTTGCAATGGGAACATCAACACTTGTGACATCCTCCAATCTCCATGGATTCCTCTCATGCCTAGTTGCTGTATCATTTTAGGTCGTGAAGCAGAATCAAAAATCCATTTATTTCATCAGTGTTCCTATGCTCCTATGCTGAAGCTTTTTGGATCTACTTAGAAGGTGAATTTGGTTAAATTTGTGCTTGGCCTGGCAACATTCAATCTCATCTCGGCCATGCTCTAGCTGGACATCCTTTCAAGAATAAGAAAATTATATGGGAAACAATCATCCAAGCTTTCTTATGGAACCCTTGGATGGAAAGAAACAACAACAGAATCTTCAAAAAAAAAAAAATTTCTATGTCTAAATTTATGGACCGTTTCCCCCTCTTTTTTTTTATTATGATCTCACTTTTCTTATCGCTCAGTGGAGATGTTTTTTATAACTTGTTTCAGTAGGAATTTTTTAAATTTCATTCATCAATGAAGAGGTTTTTGTTTCCTAAAAATAAGAATTCCATTTTTACCTCTCTTATTCTCGGTTACATGGTTTTCTACTTTGACATTGGTAGTAAGTCTAATGATGACAATCATGTAAGTAACAAAGCGCTTAGAGGGAATGAGTCCAAGCCATGTGGTTATCTACCTAGGATTTAATGACATATGAGTTACCTTCGCCACAAAATGTAGAAGGATCAAGTGGTTGTTCTACAAGAATAGTCGAGATGTGTGAAAGTTGACTTGGATGATACAAAAAAGAAGAGAGAAATGGGTTGTGCATTTTTTTTGAAAGAGAAATATTTCATTGATGAGATAGATACAAATATAAAGGGAGGATATGAAATGGGTAAATCATTGTGAAAACATTATTGAACCTTGTGGTTCATGAGTATGCTTGTTTGGTACATCATACTTGTTTATGTCCAACCTGTTAAACTACCATTGAGCCTAAAAGCTTATGCTGATAAATTATACCAATTTAATATTTTATTCATAGCTTTAATAATCTCCTTCATTGTGGTTTGGAAATTAGTAGAAGAGCCAACAAGTGTGCATCAATATTAATTGAGGAGGGAATGATGTTATAGGCTTTAATATATTAGTTGCGGTTCTGAATCATGTCAAATTACCATTGAACCCAAAAGCTTTTTTTTTAGGATACAACATTTGGGGTGGGGGGATTCGAACCTATGACTTCAAGGTCACTAAGTGTACACTGATGCCACTTGAGCTATTGCTTGCGTTAAACTTCAAGATTACTAGGTGTACCCAAAAGCTTAAGTTAGATTGGTTAAACTTCAATCTTTTGTTCATGTTTTGAATGACCAATTGTAGTTATTTGTGTCTGATATGGGTGGGTTTCTCTTCTTCTACTTAACTTTTACCATTAAATGTTTATGTGTGGGATCTCACTATCTTTTAGCTACCTATTGGGTTCGGTTATCCCATATTTCTATAATCTTAATCGAGGAACCATCTTATAACCTGTTCGGATTTTGGAAAGTTTCACAGGAAACTGTCATCTTGTATGTTGATTTTATACAAGTCCTGAAGGCTTTAATTTCTATAAGTTTTTATGTTTTCCTTTATCATATTGAATTTTACATTCCTGTGCTATCAAGTAGGTTACGATAAAAATTCCGTTTTAAGAAAACTTTTATATTTGTGAACTCAGCAGTTGTTGGTTCCTGTGTTTTCAATTTTGCTGCTAAATGGTTGATCCGTAAATATCTTATGTTTTTATTTGGAAGGAGAATGAGCATGTTTGGAGTGGGTTGATTCAAAATCTTGTTTTTCCATTAATATTTTAATTGACTATGATACTCTTGAAGATGCATTTTTCTCATTAATCATGTTAATGCCATTAGCACATGGATTTTTGGCAGATAAGGATCAAATTCTGAGAGGAGAGAGCAAAGGATGGCTCCTAGATTACTATTTCAGCGGATAACACCATACATGGTAGCGCGCCTTCGAGAGAACCAGAGGCTACTTAGCTCTTCTGTTTCAGCTTATCAAGAAGCCTCTTCTTTGTTGACATCTTATTCTGTACCTAACGATACCATTGACATGACTGATAATTGCATTCGGGTATTCTATACTTAAAATTTTATCTCTTTTTGTGCATGTGCTCTATTGGGGTCTATAGTTTCTGTTTTTAGGATAAAAATGCTGATAAATTATTGTGCCTTCTAGGCACTTGAAATTGAGTAAAGAATTTGAATTTTGAGCATTTCACTTGTAACTAATTCGATCTATATTGGGGGTTCATATAACGGTTGGTCTTGACACGTGCCATGCAGAGAATGAAAGAATTGCAAGATCCGATGGAAAAGAAGATGCTTCGCTTGAGTATTGAAAATGGGGGTTGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGACAGGTTTAACAAATATTAATTCAGTGCTTACTGCTTATTTTGGGTTTTCACTTAAAGATCGTCACTGATGCTTGATTTTACTTTTTGAAAAAAAATTACCCTTCTCTCCTCTTTTATTGTTCCAGGGTGTATGAGAAGGATGGAGTTAAATTGGTAGTTGATAATATCTCATATGATTTTGTGAAAGGAGCAACAGTTGATTATGTTGAAGAGCTGATTCGTTCTGCTTTTATTGTGAGTTAAATTTACTTCTCATTATTGCTGGCTCCCTGTTTTTGCTTAGATATATGTTTTTATTATTGATATACACTATACCAGTGTGGACCCAAATTATAGTTTTATCTTCCATGACATCTATTCAATCAATGGAGTGATTATAAAGGAAACTGAAATACTCTAAACTAAACCAACTTCCACTTGCCTTCTTTAGAATATCTATCCCTTAACTATTACACCCATACCGTTTACATAATCTCTCTCCCTAGATTAATACGGTTTGGTACTCTGAAATATAGTGACCTACTCATGTCTCTCGCTGTCCTTCACCATGCATTATTGCCCCTGCTTCTAACTAACTTCAAGAGGTTCCGTTTCTCATTTTACCCTTTCTTGAATATACATTTAAGTTTAGCTATAAAGGGTCAATGTTGGGAAAATTTTATATACTACGCTAAATAGATACTATTCCGAGGAATAATCTATGCCCCGTTTGATAACCATTTTGTTTTTTGTTTTTTGTTTCTAGTTTTTCATTTTTAGTTTTTGGTTTTTGTTTTAAAAAATAAAAATCGTATATGTTTAATAATTGATTTTAATTTTCTGTTTTTAAAAATTAAAAACTAAAAAACATGTTTGATAACTGTTTTTTGTTTTCAAACATCACATTTTGTTTAGATTTTTTAGTTTTTTACTAATTATTCTTGATTTTTTCATGTTTTTTTAAAAACGAAAACAAAAATATGTTTTTTAAAAGCTATTTTTTTAGCTTTTAGAATTTATTTAATATTTTAATTTTTTTTTTAAATTTTAAAAACAAAAATTAAAATTGGTTATCAAACAAACCTGTTTTTAAAATATTAAAAACAAAAAAAAAACCAAAAAAGAAATGTTATCAAATGAGGCTGTAGAGTTCAGTTTCTTTTTATGTGTGAATGTCTAGACCAGTTTACATGCATCTCGACTATATTTGGTTGTCAAGATAATTCATAAGAAATCATTTTTTAGGTAGGTGGCCACCATGTTGAACTTATAACCTCTAAGTACCTACGATTAACAAGATTCTTATTTGACTACTAAATCAATTCATGATAATTGAATGATGTGCGGTTTAATAACTTCACACAATTATTCAGAAGGGAAAAACAAGATGAGTAGATACCATAAATACCATGGAAGCTCTAGACAATTCCGATTTATAATCTATTTTTGGATAAGAAACAATTTCATTATAAATATGAAATTTTGAGGCAAAAGCCAATTATAAAAGGAATCTCCAACTACTCAATAGTGAGTCATAGCTATAGTCAAAGAACATTGGAGATTTCTTATACCAGGATTCCGATCTATAATCTAACAAAGAAGAGGTCTACCCTTGAGCAAAAATAGGCTATACAAGCCAGATTTGACCTTATGTTTTCATTATTTATGCATTCCTATATATAACCCAATCATAATAGAGGTAATAGCAGTGTAGAAGTTGAATTATTGTATTACGTGCAGGTGAGTACAAATCCAAGTGCTGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAAGCACCTCAAAGCTTCCTTCAATTGGACCCTTCCTATAAGGCATAGGACTTATTATCAAACAAAGATATGATGACTCGATGAGTATGTTTATCACTTGGTTGCTTTGCCTCTGAATCTCCGCTTATTTCATGTTTCATTTTATATATTCCATTCTTTATCGAATAGTAAATAATCTGATTGATAGAAATTGAACTATAACTTTTCTATTATTTAGAAACCGAGTCAGAAATAGTTACTTACAATGTAAACATAGAGAATGTTCTCGATATGGGATTCATCTTCTAAGAGAAACCATGCCCAATTTGGTTTTCCATTGTAATGCTACTAGATTCTATTTACAGTAATCAAGTGCAATGAAGGCACAAAATCATGTATTTACATGTAACTTCATTACAAGGGTTGTCAATGTTGTAGATGATAAGAATTTGGATTGCCATTTATCATTATTGTATGGTTAAGGTTCTTCCACGTATCTCTTAGTGTATAACTTGAGCATTAGAAATAATATGCTTGTAAGCAAGTACTGCATTGGTTAGATTATTGGAAATTTGGAGCCAACAATTATTTGTTTTGCAAGGACAAAAAAATGTATAGGGTCCTAGATTTGGAAATAACACGTCCTAAGGATTGAATTTGGGGACAGCCAAGGTTGAAGCCATGATGACAAAAGAACGTGCTGCCGAAGTAAACTAGTATCACATTATAAAGTTCACTTTCTCATTTGGAAAAGTTGGAAACTTGTGGCAAACCAATGGTATAATATGGCTTTGGAATTTTGGTGAATTGGATTTTGGAAAGGATAAAATGCTTATTT

mRNA sequence

GTTTGATTGCAATGAATATGTTGCAGTTTGTCTGAATCTACCAATTGTTTCATTGTAGCAAGATAGTTCACCGTTTTGGAGTCTATTTCCTAACAGTCTGAAAGACTTGATTTTTGTTTCTTTGAATCTTTGCTCATAGAAACCTTCCTTCCGTGTCTCTAGGTATAGTTTGTTATAATATAAAATTACTTGCAACTTTTGGGTCCAAACAGTGGTCCTGATAAAGCTTGGTATGCAGTAATTCATCTCTCAAACTGAGAATTGGGCATAAGTTCAACAATTGAGTTGTCTTTGATTGTTAGGGATAGTTATAAGCTTAGGTGGGCGAGATTTAATCCCAGAATGTATACATCCAGCCTCTGGCCTTTTGGAACAGCACAACATAGGATGAAGTTATTTTCATTGGGTTTTATGGATTGAGAGGAGTTAAGGAGTTTATTAAAGAATGAGGCTCTTGATTGAATCCCTGTTGTTGCAGGGATGGAGTTGGAGATTTTGTCAACTTTGGAGGTTTGAGGTGTCCCCACAGGACCACAAGAGTTCCTGAATGACCCATTGCTTTCCAGTATCCATGAGGTAAGACATGCACATGGGCAGCTAGGGGAAAAAGATTAGAGTAGGAGACGAAAAAAAGAAATCCAGAAAACTGAATCTGAAAAGGGGGTTGGGCTCATGATGGCTGATGTGCACAGGGCCAAGGCATATGCATGTGGGTTTTACTTCCTATTCTAAGCATTAAAAAAGAAGACAACACTTGGATGGAATCGGTTTGTCTGGTTTTCAGCTTTGAAAGACCAAAACTAATTCAAACATTCCTAAACTTATCGGTTTAGTATGTTCAGATTCACACCCCTGGTGAGAGTGGTGTGTTTTTGTTATGAAGGCCCATTTTGAAGATGGGTTCATGCATTTGGAACGAAATCTTGTCAAAATTCAGAAGGATAAAGACCTAGCTATAATTTCTCTTGAAAATATAAGGATCAAATTCTGAGAGGAGAGAGCAAAGGATGGCTCCTAGATTACTATTTCAGCGGATAACACCATACATGGTAGCGCGCCTTCGAGAGAACCAGAGGCTACTTAGCTCTTCTGTTTCAGCTTATCAAGAAGCCTCTTCTTTGTTGACATCTTATTCTGTACCTAACGATACCATTGACATGACTGATAATTGCATTCGGAGAATGAAAGAATTGCAAGATCCGATGGAAAAGAAGATGCTTCGCTTGAGTATTGAAAATGGGGGTTGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGACAGGGTGTATGAGAAGGATGGAGTTAAATTGGTAGTTGATAATATCTCATATGATTTTGTGAAAGGAGCAACAGTTGATTATGTTGAAGAGCTGATTCGTTCTGCTTTTATTGTGAGTACAAATCCAAGTGCTGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAAGCACCTCAAAGCTTCCTTCAATTGGACCCTTCCTATAAGGCATAGGACTTATTATCAAACAAAGATATGATGACTCGATGAGTATGTTTATCACTTGGTTGCTTTGCCTCTGAATCTCCGCTTATTTCATGTTTCATTTTATATATTCCATTCTTTATCGAATAGTAAATAATCTGATTGATAGAAATTGAACTATAACTTTTCTATTATTTAGAAACCGAGTCAGAAATAGTTACTTACAATGTAAACATAGAGAATGTTCTCGATATGGGATTCATCTTCTAAGAGAAACCATGCCCAATTTGGTTTTCCATTGTAATGCTACTAGATTCTATTTACAGTAATCAAGTGCAATGAAGGCACAAAATCATGTATTTACATGTAACTTCATTACAAGGGTTGTCAATGTTGTAGATGATAAGAATTTGGATTGCCATTTATCATTATTGTATGGTTAAGGTTCTTCCACGTATCTCTTAGTGTATAACTTGAGCATTAGAAATAATATGCTTGTAAGCAAGTACTGCATTGGTTAGATTATTGGAAATTTGGAGCCAACAATTATTTGTTTTGCAAGGACAAAAAAATGTATAGGGTCCTAGATTTGGAAATAACACGTCCTAAGGATTGAATTTGGGGACAGCCAAGGTTGAAGCCATGATGACAAAAGAACGTGCTGCCGAAGTAAACTAGTATCACATTATAAAGTTCACTTTCTCATTTGGAAAAGTTGGAAACTTGTGGCAAACCAATGGTATAATATGGCTTTGGAATTTTGGTGAATTGGATTTTGGAAAGGATAAAATGCTTATTT

Coding sequence (CDS)

ATGGCTCCTAGATTACTATTTCAGCGGATAACACCATACATGGTAGCGCGCCTTCGAGAGAACCAGAGGCTACTTAGCTCTTCTGTTTCAGCTTATCAAGAAGCCTCTTCTTTGTTGACATCTTATTCTGTACCTAACGATACCATTGACATGACTGATAATTGCATTCGGAGAATGAAAGAATTGCAAGATCCGATGGAAAAGAAGATGCTTCGCTTGAGTATTGAAAATGGGGGTTGTTCTGGATTTCAATATGTTTTCGATTTGGATGACAAAACCAATCCTGATGACAGGGTGTATGAGAAGGATGGAGTTAAATTGGTAGTTGATAATATCTCATATGATTTTGTGAAAGGAGCAACAGTTGATTATGTTGAAGAGCTGATTCGTTCTGCTTTTATTGTGAGTACAAATCCAAGTGCTGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAA

Protein sequence

MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLTSYSVPNDTIDMTDNCIRRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ

Homology

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BLAST of Sed0018976.3 vs. NCBI nr
Match: XP_022964844.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita moschata] >XP_023520276.1 iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 6.9e-67
Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           MAPRLL QR+TP++VAR+RENQRLLSSSVSA+QEASSLL     S S P DTI MTDNCI
Sbjct: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQ P E+KMLRLS+E GGCSGFQYVFDLDDKTNPDDRVYEK+GV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DYVEELIRSAF+VSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. NCBI nr
Match: XP_022970473.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66
Identity = 134/159 (84.28%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           MA RLL QR+TP++VAR+RENQRLLSSSVSA+QEASSLL     S S P DTI MTDNCI
Sbjct: 1   MASRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQ P E+KMLRLS+E GGCSGFQYVFDLDDKTNPDDRVYEK+GV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DYVEELIRSAF+VSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. NCBI nr
Match: XP_038893859.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida] >XP_038893860.1 iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida] >XP_038893861.1 iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 7.6e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT--SYSVPNDTIDMTDNCIRR 60
           MA R L QR+TPY+VAR+RENQRLLSSSVSA+QEASS LT  S S   DTI +TDNCIRR
Sbjct: 1   MASRSLIQRVTPYLVARIRENQRLLSSSVSAHQEASSSLTCPSPSPSVDTIHLTDNCIRR 60

Query: 61  MKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVK 120
           MKELQDP E+KMLRLS+E GGCSGFQYVFDLDDKTNPDDRVYEK+GVKL+VDNISYDFVK
Sbjct: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVKLIVDNISYDFVK 120

Query: 121 GATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           GAT+DYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GATIDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 157

[Close]

BLAST of Sed0018976.3 vs. NCBI nr
Match: KAG6583457.1 (Iron-sulfur assembly protein IscA-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 132/157 (84.08%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           MAPRLL QR+TP++VAR+RENQRLLSSSVSA+QEASSLL     S S P DTI MTDNCI
Sbjct: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQ P E+KMLRLS+E GGCSGFQYVFDLDDKTNPDDRVYEK+GV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMV 154
           VKGAT+DYVEELIRSAF+VSTNPSAVGGCSCKSSFM+
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFML 157

[Close]

BLAST of Sed0018976.3 vs. NCBI nr
Match: XP_022152826.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Momordica charantia])

HSP 1 Score: 257.3 bits (656), Expect = 8.5e-65
Identity = 130/159 (81.76%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           M PRLL QR+TP+ +AR+RENQRLLSSSVSA+QE  SLLT    S SV  DTI MTDNCI
Sbjct: 1   MVPRLLIQRLTPHFIARIRENQRLLSSSVSAHQEVPSLLTSPSPSSSVLIDTIHMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           ++MKELQ+PME+KMLRLS+E GGCSGFQYVF+LDDKTNPDDRVYEKDGVKLVVDNISYDF
Sbjct: 61  QKMKELQEPMEEKMLRLSVETGGCSGFQYVFNLDDKTNPDDRVYEKDGVKLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DY EELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYAEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 159

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BLAST of Sed0018976.3 vs. ExPASy Swiss-Prot
Match: Q8LCY2 (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g03905 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 8.5e-52
Identity = 106/155 (68.39%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 4   RLLFQRITPYMVARLRENQRLLS-SSVSAYQEASSLLTSY--SVPNDTIDMTDNCIRRMK 63
           R L +R+ PY+  R+REN RLL+ SS SA +EASS  +S   S  ND + ++DNCIRRMK
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 64  ELQ-DPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVKG 123
           ELQ    EKKMLRL +E GGCSGFQY F+LD++TNPDDRV+EK+GVKLVVDN+SYD VKG
Sbjct: 63  ELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVKG 122

Query: 124 ATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVK 155
           AT+DY EELIR+AF+V+ NPSAVGGCSCKSSFMVK
Sbjct: 123 ATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

[Close]

BLAST of Sed0018976.3 vs. ExPASy Swiss-Prot
Match: Q86U28 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 23  RLLSSSV--SAYQEASSLLTSYSVPNDTIDMTDNCIRRMKELQDPMEKKMLRLSIENGGC 82
           RLL++S+   A +EASS  +S       I +TD+C++R+ E+ +  E   LRL +E GGC
Sbjct: 24  RLLTASLGPQARREASS--SSPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGC 83

Query: 83  SGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFIVSTNPS 142
           SGFQY F LD   NPDDRV+E+ G ++VVD+ S  FVKGA VD+ +ELIRS+F V  NP 
Sbjct: 84  SGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQ 143

Query: 143 AVGGCSCKSSFMVK 155
           A  GCSC SSF +K
Sbjct: 144 AQQGCSCGSSFSIK 153

[Close]

BLAST of Sed0018976.3 vs. ExPASy Swiss-Prot
Match: Q5R788 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii OX=9601 GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27
Identity = 69/134 (51.49%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 23  RLLSSSV--SAYQEASSLLTSYSVPNDTIDMTDNCIRRMKELQDPMEKKMLRLSIENGGC 82
           RLL++S+   A +EASS  +S       I +TD+C++R+ E+ +  E   LRL +E GGC
Sbjct: 24  RLLAASLGPQARREASS--SSPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGC 83

Query: 83  SGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFIVSTNPS 142
           SGFQY F LD   NPDDRV+E+ G ++VVD+ S  FVKGA VD+ +ELIRS+F V  NP 
Sbjct: 84  SGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQ 143

Query: 143 AVGGCSCKSSFMVK 155
           A  GCSC SSF +K
Sbjct: 144 AQQGCSCGSSFSIK 153

[Close]

BLAST of Sed0018976.3 vs. ExPASy Swiss-Prot
Match: Q2TBG7 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus OX=9913 GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 20  ENQRLLSSSVSAYQEASSLLTSYSVPNDTIDMTDNCIRRMKELQDPMEKKMLRLSIENGG 79
           +  RLL++S           +S       I +TD+C++R+ E+ +  E   LRL +E GG
Sbjct: 19  QRSRLLAASRGPRALREVSFSSPEAGEGQIHLTDSCVQRLLEITEGSE--FLRLEVEGGG 78

Query: 80  CSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFIVSTNP 139
           CSGFQY F LD   NPDDRV+EK G ++VVD+ S  FVKGA VD+ +ELIRS+F V  NP
Sbjct: 79  CSGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDFSQELIRSSFQVLNNP 138

Query: 140 SAVGGCSCKSSFMVK 155
            A  GCSC SSF VK
Sbjct: 139 QAQQGCSCGSSFSVK 151

[Close]

BLAST of Sed0018976.3 vs. ExPASy Swiss-Prot
Match: Q9DCB8 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Isca2 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 40  TSYSVP---NDTIDMTDNCIRRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPD 99
           T+ S+P      I +TD+C++R+ E+ +  E   LRL +E GGCSGFQY F LD   NPD
Sbjct: 38  TTSSIPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGCSGFQYKFSLDTVINPD 97

Query: 100 DRVYEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVK 155
           DRV+E+ G ++VVD+ S  FVKGA VD+ +ELIRS+F V  NP A  GCSC SSF VK
Sbjct: 98  DRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSVK 153

[Close]

BLAST of Sed0018976.3 vs. ExPASy TrEMBL
Match: A0A6J1HPD1 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464825 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.3e-67
Identity = 135/159 (84.91%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           MAPRLL QR+TP++VAR+RENQRLLSSSVSA+QEASSLL     S S P DTI MTDNCI
Sbjct: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQ P E+KMLRLS+E GGCSGFQYVFDLDDKTNPDDRVYEK+GV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DYVEELIRSAF+VSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. ExPASy TrEMBL
Match: A0A6J1I3Y1 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111469443 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 134/159 (84.28%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           MA RLL QR+TP++VAR+RENQRLLSSSVSA+QEASSLL     S S P DTI MTDNCI
Sbjct: 1   MASRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQ P E+KMLRLS+E GGCSGFQYVFDLDDKTNPDDRVYEK+GV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DYVEELIRSAF+VSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. ExPASy TrEMBL
Match: A0A6J1DIX6 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020448 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.1e-65
Identity = 130/159 (81.76%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           M PRLL QR+TP+ +AR+RENQRLLSSSVSA+QE  SLLT    S SV  DTI MTDNCI
Sbjct: 1   MVPRLLIQRLTPHFIARIRENQRLLSSSVSAHQEVPSLLTSPSPSSSVLIDTIHMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           ++MKELQ+PME+KMLRLS+E GGCSGFQYVF+LDDKTNPDDRVYEKDGVKLVVDNISYDF
Sbjct: 61  QKMKELQEPMEEKMLRLSVETGGCSGFQYVFNLDDKTNPDDRVYEKDGVKLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DY EELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYAEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. ExPASy TrEMBL
Match: A0A1S3C5P3 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497193 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.5e-64
Identity = 128/159 (80.50%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           M PR L QR+TPY+VAR++ENQRLLSSS +AYQEASSL +    S S P DTI MTD+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQDP E+KMLRLS+E GGCSGFQYVF+LD KT PDDR+YEK+GVKLVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGAT+DYVEELIRSAF+VSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. ExPASy TrEMBL
Match: A0A6J1KFL9 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493424 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.9e-64
Identity = 131/159 (82.39%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MAPRLLFQRITPYMVARLRENQRLLSSSVSAYQEASSLLT----SYSVPNDTIDMTDNCI 60
           M PRLL QR+ PY+ AR+RENQRLLSSSVSA QEASSLLT    S S   DTI MTDNCI
Sbjct: 1   MVPRLLSQRLAPYLAARIRENQRLLSSSVSALQEASSLLTSPAQSPSPHTDTIHMTDNCI 60

Query: 61  RRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDF 120
           RRMKELQ+PME+KMLRLS+E GGCSGFQYVF+LDD+TNPDDRV EK+GVKLVVDNISYDF
Sbjct: 61  RRMKELQEPMEEKMLRLSVETGGCSGFQYVFNLDDQTNPDDRVCEKEGVKLVVDNISYDF 120

Query: 121 VKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 156
           VKGATVDYVEELIR AF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATVDYVEELIRCAFVVTTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of Sed0018976.3 vs. TAIR 10
Match: AT5G03905.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 204.5 bits (519), Expect = 6.1e-53
Identity = 106/155 (68.39%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 4   RLLFQRITPYMVARLRENQRLLS-SSVSAYQEASSLLTSY--SVPNDTIDMTDNCIRRMK 63
           R L +R+ PY+  R+REN RLL+ SS SA +EASS  +S   S  ND + ++DNCIRRMK
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 64  ELQ-DPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVDNISYDFVKG 123
           ELQ    EKKMLRL +E GGCSGFQY F+LD++TNPDDRV+EK+GVKLVVDN+SYD VKG
Sbjct: 63  ELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVKG 122

Query: 124 ATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVK 155
           AT+DY EELIR+AF+V+ NPSAVGGCSCKSSFMVK
Sbjct: 123 ATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

[Close]

BLAST of Sed0018976.3 vs. TAIR 10
Match: AT2G16710.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 49  IDMTDNCIRRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLV 108
           + +TD    R+  L    +K  LRL ++  GC+G  Y  +  D+    D + E+ GV+++
Sbjct: 23  LTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRIL 82

Query: 109 VDNISYDFVKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSFM 153
           V+  +   V G  +D+V++ +RS F V  NP++ G C C  SFM
Sbjct: 83  VEPKALMHVIGTKMDFVDDKLRSEF-VFINPNSQGQCGCGESFM 125

[Close]

BLAST of Sed0018976.3 vs. TAIR 10
Match: AT1G10500.1 (chloroplast-localized ISCA-like protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.4e-11
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 49  IDMTDNCIRRMKELQDPM-EKKMLRLSIENGGCSGFQYVFDLDDKTN--PDDRVYEKDGV 108
           I +++N ++ + +++    E   LR+ ++ GGCSG  Y  D +++ N  PDD   E  G 
Sbjct: 72  ISLSENALKHLSKMRSERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGF 131

Query: 109 KLVVDNISYDFVKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSF 152
            +V D  S  F+ G  +DY + LI   F  S NP+A   C C  SF
Sbjct: 132 TIVCDPKSMLFLFGMQLDYSDALIGGGFSFS-NPNATQTCGCGKSF 176

[Close]

BLAST of Sed0018976.3 vs. TAIR 10
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11
Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 51  MTDNCIRRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLVVD 110
           ++D    R+++L    +K  LRL++E  GC+G  YV +   +    D V E+ GVK++VD
Sbjct: 8   LSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVD 67

Query: 111 NISYDFVKGATVDYVEELIRSAFIVSTNPSAVGGCSCKSSF 152
             +   V G  +D+V++ +RS F V  NP+A   C C  SF
Sbjct: 68  PKAVMHVIGTEMDFVDDKLRSEF-VFVNPNAT-KCGCGESF 106

[Close]

BLAST of Sed0018976.3 vs. TAIR 10
Match: AT2G16710.2 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-06
Identity = 23/82 (28.05%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 49  IDMTDNCIRRMKELQDPMEKKMLRLSIENGGCSGFQYVFDLDDKTNPDDRVYEKDGVKLV 108
           + +TD    R+  L    +K  LRL ++  GC+G  Y  +  D+    D + E+ GV+++
Sbjct: 23  LTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRIL 82

Query: 109 VDNISYDFVKGATVDYVEELIR 131
           V+  +   V G  +D+V++ +R
Sbjct: 83  VEPKALMHVIGTKMDFVDDKLR 104

The following BLAST results are available for this feature:

BLAST of Sed0018976.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964844.1	6.9e-67	84.91	iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita moschata] >XP...	[more]
XP_022970473.1	5.9e-66	84.28	iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita maxima]	[more]
XP_038893859.1	7.6e-66	85.35	iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida] >XP_...	[more]
KAG6583457.1	2.9e-65	84.08	Iron-sulfur assembly protein IscA-like 2, mitochondrial, partial [Cucurbita argy...	[more]
XP_022152826.1	8.5e-65	81.76	iron-sulfur assembly protein IscA-like 2, mitochondrial [Momordica charantia]	[more]

BLAST of Sed0018976.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCY2	8.5e-52	68.39	Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q86U28	7.3e-27	51.49	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens OX=9606 GN...	[more]
Q5R788	7.3e-27	51.49	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii OX=9601 GN...	[more]
Q2TBG7	1.2e-26	48.89	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus OX=9913 GN=I...	[more]
Q9DCB8	2.1e-26	53.39	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus OX=10090 G...	[more]

BLAST of Sed0018976.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPD1	3.3e-67	84.91	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A6J1I3Y1	2.8e-66	84.28	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita maxima OX=3...	[more]
A0A6J1DIX6	4.1e-65	81.76	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Momordica charantia O...	[more]
A0A1S3C5P3	4.5e-64	80.50	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucumis melo OX=3656 ...	[more]
A0A6J1KFL9	5.9e-64	82.39	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita maxima OX=3...	[more]

BLAST of Sed0018976.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03905.1	6.1e-53	68.39	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.1	2.0e-11	32.69	Iron-sulphur cluster biosynthesis family protein	[more]
AT1G10500.1	4.4e-11	33.96	chloroplast-localized ISCA-like protein	[more]
AT2G36260.1	5.7e-11	35.64	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.2	2.5e-06	28.05	Iron-sulphur cluster biosynthesis family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 48..155 e-value: 1.2E-33 score: 117.5
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 49..141
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 49..148 e-value: 6.3E-15 score: 55.3
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 49..153 e-value: 2.4E-33 score: 112.5
None	No IPR available	PANTHER	PTHR43011	IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL	coord: 4..155
None	No IPR available	PANTHER	PTHR43011:SF4	BNACNNG10620D PROTEIN	coord: 4..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0018976	Sed0018976	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018976.3-five_prime_utr	Sed0018976.3-five_prime_utr-LG01:7882668..7883640	five_prime_UTR
Sed0018976.3-five_prime_utr	Sed0018976.3-five_prime_utr-LG01:7886275..7886308	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018976.3-exon	Sed0018976.3-exon-LG01:7882668..7883640	exon
Sed0018976.3-exon	Sed0018976.3-exon-LG01:7886275..7886479	exon
Sed0018976.3-exon	Sed0018976.3-exon-LG01:7886692..7886813	exon
Sed0018976.3-exon	Sed0018976.3-exon-LG01:7886936..7887044	exon
Sed0018976.3-exon	Sed0018976.3-exon-LG01:7888530..7889409	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018976.3-cds	Sed0018976.3-cds-LG01:7886309..7886479	CDS
Sed0018976.3-cds	Sed0018976.3-cds-LG01:7886692..7886813	CDS
Sed0018976.3-cds	Sed0018976.3-cds-LG01:7886936..7887044	CDS
Sed0018976.3-cds	Sed0018976.3-cds-LG01:7888530..7888595	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018976.3-three_prime_utr	Sed0018976.3-three_prime_utr-LG01:7888596..7889409	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0018976.3	Sed0018976.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0106035	protein maturation by [4Fe-4S] cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding