Sed0018958.1 (mRNA) Chayote v1

Overview


Name	Sed0018958.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin domain-containing protein
Location	LG07: 2801285 .. 2804008 (-)
Sequence length	2724
RNA-Seq Expression	Sed0018958.1
Synteny	Sed0018958.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTTTCTACTCCTCTTTGGAGCTTGTTCTTTGAACATTAGTCTCTTTTCATTTCATCATTGAAAAGCTTTGTTATCTTAGTCCCAAAAAAATATGCATTGCTAGTTATGAAATTATTGATATTCTTGATGGCTGATCCCATCACCCCAGTTGGCTAGCTTTCTGGTCATGCTTTTGGTGTGATGTATCTGATTTGTTCCAAAGGGTGTGTTTGAGCCCCCGTTTATGTAAACGGCCGAGTTGGTTATAATAACCCAACCGGTGTTTGCCCCACCGTTTATTATAAACGGTGGTTACCTAAACCTGCGTGCCAGTTTATCTAAACCTACGTGCCCGTTTATCTACACCTTACATATATTACTTTTTGTTACATAACCAGCCCCCCAAACACCGTTTATCATAATGCCTGTTATAATAACTTGCCCCTCAAACACCATTTATAATAACCTACCGTTTATCATAACCCACCGTTTATCATAACCTTCCGTCTATAATAACCAAACCGGTGCCCCAAACGCAAGTGATGCCATATGCAACTTTGTTAGTGATGCCATATGCAACTTTGTTAGTGAAAAATACGGTCACTATCTAGCAAATCATAGATAAGGGCCATTTTCCTTATCCAAACAACCATCTTAAGGAACTTGCACTTTTCTATCCATTTACTTGTGTCTTTCAAATTGTTTCGTAAACAATTCAATCCACCACCCTTCAACAGCCTTTATAAATACATTCGTTTATGCAAAGTCACCATATCAAAGCGTAAGCAAACATACATCCTTACTCCCTCTCTTTCAGCCTCTTGTTCCTCAATCTTCTGCAAGCCTTTGGTTTCTTTATTTCCCTCCTTCTTTTGTTAGTATAACTGCAGCCAGTTCCCTTATTTTTGGATATTTTGTTATAAAAATCCTTGGAAAGAAGAAGAGCGATAGGATTATAATGGATAGATTGAGAAATTTGGCATCACAGAAAGCTGTAGTGGTTTTCTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTTTTTCATGAGCTTGGTGCAAGCCCTGCAATTCATGAGCTCGACCATGAAGCAAACGGGCAAGAAATGGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGAGATCTGAAACAAATGCTGATAGATGCAAAGGCCATCTGGTTCTAATGCTACAAAAAGCAAAGTCCGGTGGCTCTTTCTTTGTTTCTTTTTGTCTTTTCCCCCCCTGCCTTTATTATGTTGAAAAGGCTCGTACAAACTGCTGTAAGCAGGCTCTGATAGATATCGGGTTTACTTACTGAACTGTATGAAATGAAGCCATATTTACCCTGAGACATCTAAATGCCAGGATAACTTTCCTAGAATTCAATATTGTTTGCATCTTCATGCATTACAAATAAAAGAAACTGACAAACATATAATGTTTACTCCAATATGCCCACTTCACTGTTTATGTGGGATTAGCCTTTATCTTCTGAAGTAGACTAAAACATTGACTAATTTTATTCTAGAAAGTGAATATTAAGATAGGACAGCAGCATGAGACGTTTGTGTTTGAAAATCTCTCCTTGAAAATTGATTTTTCTTCTGTTTGGAGTGATCATTGACAACAATTTATATTTGTTGACTGTTGTGCTTTTCATTAGATTTTCATACTGCTGCTAGATTGACAAGCTGCTTGTACACATCATGTTACTTAATTATGAGGCAAAACATGTTGATAAAGACATGAAGATATCCAATTGCGATGTGAAAATCAGATATTGTCTGTGAAATACACACCTCAACTAATCAACTATGGTTAGGGTTAATTTGATCAATCACTGCATAACATTTTGGATTTAGTTAGTTAGATACTTCCCTAATCATGGAAAACATGGTGATGCTGTAACATTTATGGCTGCTTGGACTTTGTATACATTTTTTAGCCAAGACCAACAGTGGAGACTCTTTGTTGGTCCCTAACCTAAGAGTTTAAGTTTTTGGGTTGATTGATGATTCAACATGATATTAGAGTAGGAAGTCATGAGTTTAAATTCTTATCGAGTCGTTTCATCTCCAATTAATATGATTTCTAACTGATGGATGTTCTCAAAATTTCCAAACCCACAAGTAAAAGGGAGTGTCAATATAACTAAATTTATCCAACTCATGAGCTTAAACTTTTAGCTTGATTGGTAATTTAACATGATTCAATGGTTTAACATTCAACCAACTTGAGCATAGCTCAACTGGTTAAAGCCTCGACTAAAAGGTCCAAAGCTTTTGAAGATCGAATCCTCACCCACGTGTTGTACGCTCAAAAAAATATTGTTCAATGTTATATTATATATGTATGTATATATACACACACAGACTATACACACACTCCTTAGCATAGATAAAACGCAAGCATGTGATGTTTATCTAAAGTATCAATAGCTCTGTAAATGCATCCAAGAACAGAATACTCTGTGACAGTCATTGGCTTAGTTATATCTAGAAATTACATTGACGAAGGCTTTATGAAGCTATAATTTTTCAAAGGTGGACTCTGTAAATTCAATGAGGGGGGGAAAGTTCAACCTTTTCAATTTATATATCTTTATGCTCACCAGATTGTAAAACTTAATTCTGTTAGATTAATGGAGCTTGAAAGCTCC

mRNA sequence

CTGCTTTCTACTCCTCTTTGGAGCTTGTTCTTTGAACATTAGTCTCTTTTCATTTCATCATTGAAAAGCTTTGTTATCTTAGTCCCAAAAAAATATGCATTGCTAGTTATGAAATTATTGATATTCTTGATGGCTGATCCCATCACCCCAGTTGGCTAGCTTTCTGGTCATGCTTTTGGTGTGATGTATCTGATTTGTTCCAAAGGGTGTGTTTGAGCCCCCGTTTATGTAAACGGCCGAGTTGGTTATAATAACCCAACCGGTGTTTGCCCCACCGTTTATTATAAACGGTGGTTACCTAAACCTGCGTGCCAGTTTATCTAAACCTACGTGCCCGTTTATCTACACCTTACATATATTACTTTTTGTTACATAACCAGCCCCCCAAACACCGTTTATCATAATGCCTGTTATAATAACTTGCCCCTCAAACACCATTTATAATAACCTACCGTTTATCATAACCCACCGTTTATCATAACCTTCCGTCTATAATAACCAAACCGGTGCCCCAAACGCAAGTGATGCCATATGCAACTTTGTTAGTGATGCCATATGCAACTTTGTTAGTGAAAAATACGGTCACTATCTAGCAAATCATAGATAAGGGCCATTTTCCTTATCCAAACAACCATCTTAAGGAACTTGCACTTTTCTATCCATTTACTTGTGTCTTTCAAATTGTTTCGTAAACAATTCAATCCACCACCCTTCAACAGCCTTTATAAATACATTCGTTTATGCAAAGTCACCATATCAAAGCGTAAGCAAACATACATCCTTACTCCCTCTCTTTCAGCCTCTTGTTCCTCAATCTTCTGCAAGCCTTTGGTTTCTTTATTTCCCTCCTTCTTTTGTTAGTATAACTGCAGCCAGTTCCCTTATTTTTGGATATTTTGTTATAAAAATCCTTGGAAAGAAGAAGAGCGATAGGATTATAATGGATAGATTGAGAAATTTGGCATCACAGAAAGCTGTAGTGGTTTTCTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTTTTTCATGAGCTTGGTGCAAGCCCTGCAATTCATGAGCTCGACCATGAAGCAAACGGGCAAGAAATGGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGAGATCTGAAACAAATGCTGATAGATGCAAAGGCCATCTGGTTCTAATGCTACAAAAAGCAAAGTCCGGTGGCTCTTTCTTTGTTTCTTTTTGTCTTTTCCCCCCCTGCCTTTATTATGTTGAAAAGGCTCGTACAAACTGCTGTAAGCAGGCTCTGATAGATATCGGGTTTACTTACTGAACTGTATGAAATGAAGCCATATTTACCCTGAGACATCTAAATGCCAGGATAACTTTCCTAGAATTCAATATTGTTTGCATCTTCATGCATTACAAATAAAAGAAACTGACAAACATATAATGTTTACTCCAATATGCCCACTTCACTGTTTATGTGGGATTAGCCTTTATCTTCTGAAGTAGACTAAAACATTGACTAATTTTATTCTAGAAAGTGAATATTAAGATAGGACAGCAGCATGAGACGTTTGTGTTTGAAAATCTCTCCTTGAAAATTGATTTTTCTTCTGTTTGGAGTGATCATTGACAACAATTTATATTTGTTGACTGTTGTGCTTTTCATTAGATTTTCATACTGCTGCTAGATTGACAAGCTGCTTGTACACATCATGTTACTTAATTATGAGGCAAAACATGTTGATAAAGACATGAAGATATCCAATTGCGATGTGAAAATCAGATATTGTCTGTGAAATACACACCTCAACTAATCAACTATGGTTAGGGTTAATTTGATCAATCACTGCATAACATTTTGGATTTAGTTAGTTAGATACTTCCCTAATCATGGAAAACATGGTGATGCTGTAACATTTATGGCTGCTTGGACTTTGTATACATTTTTTAGCCAAGACCAACAGTGGAGACTCTTTGTTGGTCCCTAACCTAAGAGTTTAAGTTTTTGGGTTGATTGATGATTCAACATGATATTAGAGTAGGAAGTCATGAGTTTAAATTCTTATCGAGTCGTTTCATCTCCAATTAATATGATTTCTAACTGATGGATGTTCTCAAAATTTCCAAACCCACAAGTAAAAGGGAGTGTCAATATAACTAAATTTATCCAACTCATGAGCTTAAACTTTTAGCTTGATTGGTAATTTAACATGATTCAATGGTTTAACATTCAACCAACTTGAGCATAGCTCAACTGGTTAAAGCCTCGACTAAAAGGTCCAAAGCTTTTGAAGATCGAATCCTCACCCACGTGTTGTACGCTCAAAAAAATATTGTTCAATGTTATATTATATATGTATGTATATATACACACACAGACTATACACACACTCCTTAGCATAGATAAAACGCAAGCATGTGATGTTTATCTAAAGTATCAATAGCTCTGTAAATGCATCCAAGAACAGAATACTCTGTGACAGTCATTGGCTTAGTTATATCTAGAAATTACATTGACGAAGGCTTTATGAAGCTATAATTTTTCAAAGGTGGACTCTGTAAATTCAATGAGGGGGGGAAAGTTCAACCTTTTCAATTTATATATCTTTATGCTCACCAGATTGTAAAACTTAATTCTGTTAGATTAATGGAGCTTGAAAGCTCC

Coding sequence (CDS)

ATGGATAGATTGAGAAATTTGGCATCACAGAAAGCTGTAGTGGTTTTCTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTTTTTCATGAGCTTGGTGCAAGCCCTGCAATTCATGAGCTCGACCATGAAGCAAACGGGCAAGAAATGGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGCTCAGCAAAAGATGTTATTTCTCTCCATGTTAATGGAGATCTGAAACAAATGCTGATAGATGCAAAGGCCATCTGGTTCTAA

Protein sequence

MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWF

Homology

[Close]

BLAST of Sed0018958.1 vs. NCBI nr
Match: KAE8646327.1 (hypothetical protein Csa_015602 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49
Identity = 96/102 (94.12%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPA+HELDH+ANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWF 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWF
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWF 102

[Close]

BLAST of Sed0018958.1 vs. NCBI nr
Match: XP_022954101.1 (glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like isoform X2 [Cucurbita maxima] >XP_023549403.1 glutaredoxin-C11-like [Cucurbita pepo subsp. pepo] >KAG6575856.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014392.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.9 bits (520), Expect = 3.3e-49
Identity = 97/101 (96.04%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPAIHELDHEANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. NCBI nr
Match: XP_038876720.1 (glutaredoxin-C11 [Benincasa hispida])

HSP 1 Score: 203.8 bits (517), Expect = 7.3e-49
Identity = 96/101 (95.05%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPAIHELDH+ANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. NCBI nr
Match: XP_008451630.1 (PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cucumis sativus] >KAA0068043.1 glutaredoxin-C11-like [Cucumis melo var. makuwa] >TYK18085.1 glutaredoxin-C11-like [Cucumis melo var. makuwa])

HSP 1 Score: 203.4 bits (516), Expect = 9.5e-49
Identity = 95/101 (94.06%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPA+HELDH+ANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. NCBI nr
Match: XP_022146613.1 (glutaredoxin-C11 [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 4.0e-47
Identity = 92/101 (91.09%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MD LRNLASQKAVV+FSKSSCYICHS+QTLF+ELG SPAIHELDHEANG+E+DWALRGLG
Sbjct: 1   MDTLRNLASQKAVVIFSKSSCYICHSVQTLFYELGXSPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy Swiss-Prot
Match: Q9LYC6 (Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.6e-36
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           M+R+R+L+S+KA V+F+KSSC +CHSI+TLF+ELGASPAIHELD +  G+EM+ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIW
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIW 102

[Close]

BLAST of Sed0018958.1 vs. ExPASy Swiss-Prot
Match: O82254 (Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.5e-33
Identity = 67/102 (65.69%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWAL-RGL 60
           M+R+R+LAS+KA V+F+KSSC +CHSI+TLF+ELGASPAIHELD +  G +M+ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIW
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIW 102

[Close]

BLAST of Sed0018958.1 vs. ExPASy Swiss-Prot
Match: Q9LIF1 (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MD +  LASQ+AVV+FSKS+C + H+I+ LF+E G SPAI E+D +  G++++WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+W
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-24
Identity = 54/102 (52.94%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWAL-RGL 60
           MDR+  LA+Q+AVV+FS SSC +CH++  LF ELG +P + ELD +  G+EM+ AL R L
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           G +P+VPAVFIGG+ +GS   V+SLH++G+L  +L +A A+W
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALW 102

[Close]

BLAST of Sed0018958.1 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-24
Identity = 51/101 (50.50%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           M+ L+ + S+K+VV+FSK+SC + H+I+TLF +LG +P I+ELD  + G+E++ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+W
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy TrEMBL
Match: A0A6J1JXM7 (glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49
Identity = 97/101 (96.04%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPAIHELDHEANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy TrEMBL
Match: A0A6J1GPY2 (glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49
Identity = 97/101 (96.04%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPAIHELDHEANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy TrEMBL
Match: A0A5A7VIX0 (Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00060 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.6e-49
Identity = 95/101 (94.06%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPA+HELDH+ANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy TrEMBL
Match: A0A0A0K7M4 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G394580 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.6e-49
Identity = 95/101 (94.06%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPA+HELDH+ANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. ExPASy TrEMBL
Match: A0A1S3BRC8 (glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.6e-49
Identity = 95/101 (94.06%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MDRLRNLASQKAVV+FSKSSCYICHSIQTLF+ELGASPA+HELDH+ANG+E+DWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Sed0018958.1 vs. TAIR 10
Match: AT3G62950.1 (Thioredoxin superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 4.0e-37
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           M+R+R+L+S+KA V+F+KSSC +CHSI+TLF+ELGASPAIHELD +  G+EM+ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIW
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIW 102

[Close]

BLAST of Sed0018958.1 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 3.2e-34
Identity = 67/102 (65.69%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWAL-RGL 60
           M+R+R+LAS+KA V+F+KSSC +CHSI+TLF+ELGASPAIHELD +  G +M+ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIW
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIW 102

[Close]

BLAST of Sed0018958.1 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MD +  LASQ+AVV+FSKS+C + H+I+ LF+E G SPAI E+D +  G++++WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+W
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALW 101

[Close]

BLAST of Sed0018958.1 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 51/101 (50.50%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           M+ L+ + S+K+VV+FSK+SC + H+I+TLF +LG +P I+ELD  + G+E++ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+W
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALW 101

[Close]

BLAST of Sed0018958.1 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 7.8e-25
Identity = 50/101 (49.50%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVVFSKSSCYICHSIQTLFHELGASPAIHELDHEANGQEMDWALRGLG 60
           MD+L+ + S+K+VV+FSK+SC + H+I+TLF + G +P I+ELD    G+E++ AL  LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML    A+W
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALW 101

The following BLAST results are available for this feature:

BLAST of Sed0018958.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646327.1	1.9e-49	94.12	hypothetical protein Csa_015602 [Cucumis sativus]	[more]
XP_022954101.1	3.3e-49	96.04	glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like...	[more]
XP_038876720.1	7.3e-49	95.05	glutaredoxin-C11 [Benincasa hispida]	[more]
XP_008451630.1	9.5e-49	94.06	PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cuc...	[more]
XP_022146613.1	4.0e-47	91.09	glutaredoxin-C11 [Momordica charantia]	[more]

BLAST of Sed0018958.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYC6	5.6e-36	69.61	Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1	[more]
O82254	4.5e-33	65.69	Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1	[more]
Q9LIF1	1.5e-28	55.45	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1	[more]
Q7G8Y5	2.9e-24	52.94	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]
O23421	2.9e-24	50.50	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]

BLAST of Sed0018958.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXM7	1.6e-49	96.04	glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=...	[more]
A0A6J1GPY2	1.6e-49	96.04	glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1	[more]
A0A5A7VIX0	4.6e-49	94.06	Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A0A0K7M4	4.6e-49	94.06	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G39458...	[more]
A0A1S3BRC8	4.6e-49	94.06	glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1	[more]

BLAST of Sed0018958.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62950.1	4.0e-37	69.61	Thioredoxin superfamily protein	[more]
AT2G47870.1	3.2e-34	65.69	Thioredoxin superfamily protein	[more]
AT3G21460.1	1.1e-29	55.45	Glutaredoxin family protein	[more]
AT4G15700.1	2.1e-25	50.50	Thioredoxin superfamily protein	[more]
AT4G15680.1	7.8e-25	49.50	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 72..85 score: 31.85 coord: 58..71 score: 34.23 coord: 13..31 score: 36.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..101 e-value: 4.4E-26 score: 92.7
None	No IPR available	PANTHER	PTHR10168:SF202	GLUTAREDOXIN-C1 PROTEIN	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 20.010309
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 12..93 e-value: 3.30918E-35 score: 113.404
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 5..101 e-value: 1.0E-37 score: 126.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 3.9E-10 score: 39.8
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..101

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0018958	Sed0018958	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018958.1-exon	Sed0018958.1-exon-LG07:2801285..2804008	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018958.1-three_prime_utr	Sed0018958.1-three_prime_utr-LG07:2801285..2802759	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018958.1-cds	Sed0018958.1-cds-LG07:2802760..2803068	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018958.1-five_prime_utr	Sed0018958.1-five_prime_utr-LG07:2803069..2804008	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0018958.1	Sed0018958.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity