Sed0018876.1 (mRNA) Chayote v1

Overview


Name	Sed0018876.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	DEAD-box ATP-dependent RNA helicase
Location	LG05: 2941966 .. 2949762 (+)
Sequence length	1729
RNA-Seq Expression	Sed0018876.1
Synteny	Sed0018876.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAGTTCATCATCTTCTTCTTCACCATCACGCCAACGCCCTGTCCTTCTCTGTTTCAGCAGCTCGTCGTCGCCGCCGCCTCTCTCCAGTGAACTTCTGCCGTCGACGTCGTCTTTATTCCGTCCTTACCGCCGCAGCCTTGTTCCTAGCGATTTTGCATCGACTTTTTCACTCTATTGCTGTTACTGGTATTCTCTCAATCTCCTTTTCTGTCTTTCTTCTAACTTGAACACATAGATTAGAACTTCTCTAATGAAATAATGGAGGACTTTATTATTAGCTTTTCCTTTCTGTAATAACAATAGCTGAATAGCAACGAAATTAGAAGCAGCCTTGCGGCAAATTGGGACGTGGCTTTTGGTTTCCTGTGACATATATTTAACCATTCTAGATTATTGTTTTCTAAATCGGTAAACCCTTTTCGCCTTCCGTCCGCACGGCCGCATTCTCAACTGCGGCAGTCTCAGCCTCTTGACAAACTCGCCTCCGCTCCCCAATTGCTAAGTTTCTTTCGATTGACTAACGAGGGCGAATCCATTAGAAAAAACAAAACTAAGCAGAATAGCTTGTATAAGGTAACCGAAATTGGACGGGTTTTGGAGTTTTTAAGTCTAACCCTGTTCTTTCCCGATAAAATTTCTTCTCTTCCAGCTCCGTATAAGGTTTCCGTCTAATTCTATGTTTTTTTTGAATTTCTTGTTTTTGTGTTAGGAAAACGGCAACAACAATCGAAAACGGTAAAAAAAAGAGAGAAAACACAAGAATTAGGTGGTTCACTTATGATAAACTAGCTACGTCTACGGGGAGATAAACTAGTATGATTTTACTACTTTAGGAGATATGAATATGAATTCAAAATGTTGATGGCTAGGGTTTTAAGAGAGTTTATGCCGTCCACTTTTATAAAACCCTATTTTATAATAGACCCAAATACATAAAAGCCCATATGCATAAGCATAAATCCAATTTTCTATTTCGTCTAGGTTTTGGGGGCGAGACCTCCTACTAAGTAATCGAACCGTTTAAGGCATATCTTGACAGGATTCAAACCTAGACCTATTGGTTATTATTGCTCTGTTGGCGACTAATTCAATTTTTTCTGTTATTTATCTGATTTTGAATGTGTGAAAACTTATTGCCTCATTCATTCAACCCAAACCCAATCAGTATCTGAACTTGGTTTTACACGACACACGCCATGAAAATTTGCTAAGGTTTTTGTGTTTTGTTGCATCTTTCAGATTGAACGGTCGCAATGGAGCAAGACAATGAAGGAGATGTGAAGACGTTTAAGGACTTGGGGATATGTGAACAATTGGTGGATGCATGCGAGAGTTTAGGCTGGACAAATCCATCCAAGATTCAGGCTGAGGCGATTCCTCATGCCTTGGAAGGTTCTTTCTTTAGCTCATGCATTTTCCTCTGTTCATTTTTTTATTAAATTATTATTATTATGAGCTTGCCATTTGAAGCTTTGGTGTATAGGACACCTTCTGTTAAAGTTCTCCTATGCTCAAAAGCATAAGCATAGATGCGTCAAAGGCTTACATGTGCATAGTTCAACAGTTATGACATCTTTAGTGTAATATTCTACAAGAAAATGAAATCACATATGAAGACGTGTGATATGAATTTGGCACAGCATAAATTGGTGACACGTATACTAGTCTATTACTTTGGCCAATACAAAATAGTAGTCTTGAAATTGGGAATCAGTCTAACTTTCAGGATTCTTTTCTGAATGATATCCCCCTCATTTTTTTGTTCTCAATGAGTCGATCGTAGAGGCTTTTGTCTATAACCACTTTCGGTTTTAGGTCCTTTATATTTTTAAGTTTATTCATTCAATTGATCTATGGTGCACTAGTAAATTTTAGGATGCAGGTCTAACTTTAGGATGCAGGTCTACGTCTAACTTTAGGATGCAGTTTATGTTGTTAATGTTCAACCTTTTGACTGTCGTAATGCAGGAAAGGATTTAATTGGACTTGCACAAACTGGCTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCTCTTTTGGCGGCTCCTCAAGCCTTTTTTGCTTGTGTGCTCTCTCCCACAAGGTTTGATATATACATAGCACGTCTTATTCTTTAAAAGGAGCAAACCGATATATTTTTTTTTAAGGATTTTAGCTTGTCTTTAAAATTCAGATATGTTGCTACTGTTATTTTTCAGGGAGCTTGCAATTCAGATTAGTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGAATTAAGTGTGCACCGGTAAGCTTTCAGCTAATATAGTGTCCTGACTACCAGAAATTCTGATTACAAATCATGTGGGTATTACATTAGACATGAATAAAAAATGCTTTCATATTTGTACTATTACTATGTTTCAACGTTAAATAATGAAAAATCTAAGTCATTTGAGCACATAATCATTTATTTTTGAGTAATTCTTATATATTAATGAAATGGATATTAAATATTATCTAAACCTGACGTTAAATTTCTAGATAGGAGGTTATAGGCAAACATAATGCTATAGGCTCAGACCCTTGGTGATAATTACCGTGTATCTAAGGGGAGCTATTAAATTGGAGTTTGTTTATTGGAAGCTATCCGGTAGGTGTTTAGGTTGCATTGGTTGCTTACTCTTGTGAATAAAAGGAAGAGGGGAGATTATCTATTGTAGTATGCAGATGGATGCCGGCTCCTGTAGGTGATTGTATATTTGTATTTTTCCATTTTCAATAAAAATCTTGCCGAGTCCCCACAGGGTGGCACATCTGGTTAAAGACTTGGGCCTTGAAGGTGTGCTCCTCTCAAGGTCCCTGGTTCGAGACTTACCTGTGACATTAATTTGTAGACACTTCCCGTGTCTTCATTCCTTCGATGTCTTTCGGTGCCTGACCTAGGGATGGACATGGTTATCGTTGTTTTAAAAAAAAGTAAAAAACTTAGCTGAACTCTTGTACTTCAATGCCCTGATAGTCACGGGTATAAATAGAGAACTTCAATGCCTAAAGACTTGTGACAATGTTAACTATCTAAACTGAGAAAGAGAGACTAAGGTTAATATAAACCTTAACAAAAAAAAATTATTGTGGGTGCGAGGTCTCCTATTTTGCTTTTCTTGTTAGTGTTTACCTATTGATGTTGTTTGTGCTTCTGTATTTAGTAAATATCTTTTTTTTTTTAATTATTATTTTTGTAGCTTGTTGGAGGGGTAGACATGGTGCAGCAAGCCATTAATTTGGCTAAACGGCCACATATTATTGTAAGTCTCTTTTAAATTTTCCGCATCTCTTAAACTCATGCTATAGTGTGGACTGTGGTCCATTTGTTAATTCATGTCCTCTTCTCAACCTTAACTAAATGTTCTTGTGGAACACATGAAATGCAATTTACTCAAAAAAAGGAATTTTATCAAGTCATACTATATGCCTTTAGAAAAAATTATACAAATGGTTGTACAACAAGTCTACCAGTAAATGGGCTTGACTATTAGTTAAAACTTAAAACACATGTCCAAGTTAAATGAAGTTACTACTACTACTATTGGTAACTTCTTCAGCAGAGTAGTTGAACTTTAAAGTTAAAAATACCACACATCATGAAGCATCAACAATTGTACGATGTGCACGGAAGTGCTTTTGTGCACATAAACCTTTTTAGACACTATTTCCTTATCCTTTTTGTAATTAGTTTGATGATATCAAATGGTTTGTCATGGCTTCCATTTCTGGTTTTTTATCTTTATCCAGCTGTTGATTTAATATTTAATTTATTTTGTTATAGGTTGGGACACCTGGGCGCCTTGTGGACCATCTTTCCAATACGAAAGGTTTTTCCCTCCGCACCTTGAAATATTTGGTGAGTTTTTGTAAAGAATTACCTTTGAGTTTTTTTTCTCCCTGGCCTAGTAAGCTTTCATGTAAATTGAATATGTATACAGTATATTTGGTTGAAGGGAATAATCTTGTACTGACTAACCTGTTTTGCATGTTTGAGCAGGTCCTTGATGAGGCGGACAGATTATTGAATGAAGACTTCGAAAAATCAATAGATGAAATTTTGAATGAAATTCCTCGTGAGAGGCGAACATATCTATTTTCTGCTACTATGACTAAAAAGGTATATGAGCAAACATTTGATTTGATTTTTTCCCATGTAGAGTGGAATTTTGTGTTGGAAGTTAAGAATTAATTTAAAAAATATGAAGACAAGATTAACCTGCTGTCATTATTGTATCTTATTCAATGTTGTAAGTGGGCTAGGGATATGCTTAAATACTTCACACCATCCTTGATTTATGCATATAATGACGTGCCTTAGGTTTTTTTTTTCCTCTGTTTTTATTAAATGTTAAAGAAAGAAGATATTAGTAGCAAAACATCTGCATATTTACGATCTAATAAAGCTTTCTTCGTTTAGTTTTTCAATATTTCATCAAAATAAATAAATAAATATATTTCATCATCACAAAAAAAGAATACCATCAAGGGCTTCATTTCCTTAACAAGTATCTATCATCAGTATTGAATTGTTTTCACCAACAATGTATAAGTGTGTACCCATGATAAAATATTCATGGGTTCGACTCTTCCACTCCAATCCCACTCCCGTTGTTGTTGAACTTTTAAATTCTTTTCTTTAGATATAGATGTGAGACGCCATCTGAATATGTGTTTTTTGGACTGGTAATTTATATTTGATGTTTTGTAATGGTTACTATAATCGCTGACTAAGTTGAGATGACAATACTACAGGTTCGGAAACTTCAAAGGGCCTGCTTAAGGAATCCTGTTAAGGTATGATTGTGATTTTCAAAGATCTAGTTTTTTCATCGCACGAGTTTATTCAAATCTTATTTGTTTTTTCGTCTTTATTTCTTTCAGATTGAAGCCGCAACCAAATATTCCACAGTAGACACCTTGAAGCAGGAATATTGTTTTATCCCTGCAAAATATAAGGTTTTCACATTTCCTACTGTTTATTAATTTTGTCGATGACGCATCATTCATTCTCCTGAGCCTGATTGTTAGTTTGATATTTTCTTTACTCGTTACATATAAAAATGAAAGAACCAAAAAAAAAAAAAAATTGCCCACCACAGACTTAGTTACTATATTAGAAACTGACTACGATGAGAGTTGTGTTTCTGTTTTTGTAAGGAGATGCGTTTTTAGGAATTATGGATAGGAATTAGTGTTTCTACTTTTGAAGCTGTCTTTTTACTGCTGGATTTACTTTATTACATGTTATTTGATCAGGAGTGTTATCTTGTCTATATCTTAACTGAGTTGTCTGGTTCTACATCAATGGTCTTCACTCGCACTTGTGATGCTACTCGCCTTCTATCATTGATTCTTCGAAATCTCGGATTAAGAGCCATTCCCATAAGTGGTCAGATGACCCAGGTATTGTTGCGATATAACTTTGTGGTTTACAGCTTTTTTCTATTGGTTTAAAAATATTTGACAGTTGAAAAAGAGTTGGAAGTCTATTTGTGGAATGATTTTATTATACAATAAGAAATTGAACGCTGTGCATGGACTATGTACTTGTTGACAGCCAAAGAGACTTGGAGCCTTAAATAAGTTCAAGGCCGGAGAGTGCAATGTTCTCATCTGCACCGATGTCGCTAGCAGAGGACTTGATATTCCGTCTGTGGATATGGTCATAAATTACGATATTCCTTCTAATTCCAAGGTTCTTCTCCTTCTGAAATGCGAAGTAATTTGGTTTACTGTGCATCGTTGTGGATTATATTCCTTCTGCTATTTGCATTATTTTCTGTATGATCATGACATATCTCTCTCTTTGTTTAATACTTACATTCTCCAATTCGACAACTACGTGCTCGGTAATTTCTTATTTCAGAGTTGAACTAAAGAAACAAGTTTCTCATTTCAGAGTTGTTTTTGTCCTCGGGGGTTCTCTTTTCTCTTTCCTCCCTGGCCTAAGGAGTCCTAGGTCTGTATAGCTTTCTTTCTAGATTTTAGATACGAAAACTGCTTTCGTGTTTTCTGTCCTACTGCACTATTACACAAAGAGCCTCGAGGATCTAAGAGGTGCCACCTATTTAAGAAATAATTTTCTACGAACATTTTTGGTGGCCAAATGTTTTAGGGTTATACAGGGTGAGAAGAGTAGAGTTGAAGCTGATATGAACGTCTACGTGTAAAAAAGAACAAATAACAAACATCTACACTTAATTAATATGGGGTTGAGAATGGGATAGCAGAAGGGTTTAGACTTGGGTTGTTACGGATGGGATTTTTCATTCTTGCCGTGTAATTTTATTTTTAATAATTTAATTACTTCTAAAAAATTACCAAAATTCGACAAGGACCCAATTTCTAACATTTTATCTTCTTTTGAAATACTCTTCTATAAGCATTATCTTGATGTACATCTTGTGAACTGAATCTTTGACAAATAGCTCCGTTGATCGCCTAAACTAAAAAAAGACGATCAAAATTGCTTATATAATTAATAGATTAGGTCTTCATTTCTTCCATCGTTCTTCCTGATGCCATGCCGCGCATTGCTCAACTCGAATACTGTACGGGCTTTTGACGAAAATCTTCCATCACAAATGTTGCTGTACCAAAAAATATATTATAAACACAATAAAGAATTTTTCTTATAAGATTTTTTTTTTTTTTTTTGCAGGATTACATACATAGAGTGGGAAGAACTGCTCGCGCAGGTCGTTCTGGGGTTGCCATTTCATTAGTTAATCAGTATGAATTAGAGTGGTATATGCAAATAGAGAAGCTCATAGGTAATCAAATGATGCCTTTTTTGCAGCGGAACACGACATGAGTCTTTTTTATTTTTACTTAACTGACTTTTTTAACATGGCAGGAAAAAAGCTACCACAGTTTCCCGCTCAGGAAGAGGAAGTTTTGATGATGTTAGAGCGTGTGGCAGAGGCAAAGAGAATATCTATTATGGTATTACTATACTAATGATATTACAATATCTTCCCATTTGGTCATTTAGTAGCCTCGAGCGCCTGAGTCTCGAGGGCGTGCTCTCTGTAAAAGTCCCAGGTTTAAGGTGGCTGTGGGGATTAATTTCCCAAGCAACCCCAATTTTGTTTTCGGTTCTATGAAGTATTCCAGTGCCACGGGTTTTTAGGAGTAATGCTCCAAATTCTTGGATCATAAAGAAAGTCTTTCGGTTTAAATTGGAGATTCGCCCCCCTATATCTTCATGGGCATCTATATGCCCATTTTTAAAGTTTGCATTCAAGAAACAACAAGAAATTTTGCATATTTTGGAGACCTCAAAGAGGCTATAATGTGTCTAGTACTAATGGCTCTTCTGAATTTTTAATTTTGTATGTGAGAACTTATAATAGATCAAAGAGATTTACCAAACGGATAGTTTAGGCTCCATTTATATTCTTTTTTCTTGTTCTTATTCTTAATGTGGTTATTAACATGTGCAGAAAATTAAAGAAGAGGGTAGCAAAAAAAGGAGGAGAGGTGGAGACGATGACGACAACGACGAGGTCGAAAAGTACCTCAAGACTGGAAAGAATGGGAAGATGCCCAAGAATGGGAAGAAAATGTACAAACAGATGAAAAGATAATGTGGCAAAGTTTTTTTATATTTATAATTAGTCTAAATTTGTGTACTTCAAAAAACTTCGATTCAATTTTGTTTTTAATTTTCTAATGCATTTGCATCAGATGAGTTGAATTATAAGAGAAGCCAAAGTATCAAGAATGGATCCTTTTTTTTTTGTTTTTTGTATGGTTCATCCATTCTTGAGATGGGG

mRNA sequence

CAGAGTTCATCATCTTCTTCTTCACCATCACGCCAACGCCCTGTCCTTCTCTGTTTCAGCAGCTCGTCGTCGCCGCCGCCTCTCTCCAGTGAACTTCTGCCGTCGACGTCGTCTTTATTCCGTCCTTACCGCCGCAGCCTTGTTCCTAGCGATTTTGCATCGACTTTTTCACTCTATTGCTGTTACTGATTGAACGGTCGCAATGGAGCAAGACAATGAAGGAGATGTGAAGACGTTTAAGGACTTGGGGATATGTGAACAATTGGTGGATGCATGCGAGAGTTTAGGCTGGACAAATCCATCCAAGATTCAGGCTGAGGCGATTCCTCATGCCTTGGAAGGAAAGGATTTAATTGGACTTGCACAAACTGGCTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCTCTTTTGGCGGCTCCTCAAGCCTTTTTTGCTTGTGTGCTCTCTCCCACAAGGGAGCTTGCAATTCAGATTAGTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGAATTAAGTGTGCACCGCTTGTTGGAGGGGTAGACATGGTGCAGCAAGCCATTAATTTGGCTAAACGGCCACATATTATTGTTGGGACACCTGGGCGCCTTGTGGACCATCTTTCCAATACGAAAGGTTTTTCCCTCCGCACCTTGAAATATTTGGTCCTTGATGAGGCGGACAGATTATTGAATGAAGACTTCGAAAAATCAATAGATGAAATTTTGAATGAAATTCCTCGTGAGAGGCGAACATATCTATTTTCTGCTACTATGACTAAAAAGGTTCGGAAACTTCAAAGGGCCTGCTTAAGGAATCCTGTTAAGATTGAAGCCGCAACCAAATATTCCACAGTAGACACCTTGAAGCAGGAATATTGTTTTATCCCTGCAAAATATAAGGAGTGTTATCTTGTCTATATCTTAACTGAGTTGTCTGGTTCTACATCAATGGTCTTCACTCGCACTTGTGATGCTACTCGCCTTCTATCATTGATTCTTCGAAATCTCGGATTAAGAGCCATTCCCATAAGTGGTCAGATGACCCAGCCAAAGAGACTTGGAGCCTTAAATAAGTTCAAGGCCGGAGAGTGCAATGTTCTCATCTGCACCGATGTCGCTAGCAGAGGACTTGATATTCCGTCTGTGGATATGGTCATAAATTACGATATTCCTTCTAATTCCAAGGATTACATACATAGAGTGGGAAGAACTGCTCGCGCAGGTCGTTCTGGGGTTGCCATTTCATTAGTTAATCAGTATGAATTAGAGTGGTATATGCAAATAGAGAAGCTCATAGGAAAAAAGCTACCACAGTTTCCCGCTCAGGAAGAGGAAGTTTTGATGATGTTAGAGCGTGTGGCAGAGGCAAAGAGAATATCTATTATGAAAATTAAAGAAGAGGGTAGCAAAAAAAGGAGGAGAGGTGGAGACGATGACGACAACGACGAGGTCGAAAAGTACCTCAAGACTGGAAAGAATGGGAAGATGCCCAAGAATGGGAAGAAAATGTACAAACAGATGAAAAGATAATGTGGCAAAGTTTTTTTATATTTATAATTAGTCTAAATTTGTGTACTTCAAAAAACTTCGATTCAATTTTGTTTTTAATTTTCTAATGCATTTGCATCAGATGAGTTGAATTATAAGAGAAGCCAAAGTATCAAGAATGGATCCTTTTTTTTTTGTTTTTTGTATGGTTCATCCATTCTTGAGATGGGG

Coding sequence (CDS)

ATGGAGCAAGACAATGAAGGAGATGTGAAGACGTTTAAGGACTTGGGGATATGTGAACAATTGGTGGATGCATGCGAGAGTTTAGGCTGGACAAATCCATCCAAGATTCAGGCTGAGGCGATTCCTCATGCCTTGGAAGGAAAGGATTTAATTGGACTTGCACAAACTGGCTCTGGGAAAACTGGAGCTTTTGCTCTTCCCATTTTGCAAGCTCTTTTGGCGGCTCCTCAAGCCTTTTTTGCTTGTGTGCTCTCTCCCACAAGGGAGCTTGCAATTCAGATTAGTGAGCAGTTTGAAGCTTTAGGGTCTGGCATTGGAATTAAGTGTGCACCGCTTGTTGGAGGGGTAGACATGGTGCAGCAAGCCATTAATTTGGCTAAACGGCCACATATTATTGTTGGGACACCTGGGCGCCTTGTGGACCATCTTTCCAATACGAAAGGTTTTTCCCTCCGCACCTTGAAATATTTGGTCCTTGATGAGGCGGACAGATTATTGAATGAAGACTTCGAAAAATCAATAGATGAAATTTTGAATGAAATTCCTCGTGAGAGGCGAACATATCTATTTTCTGCTACTATGACTAAAAAGGTTCGGAAACTTCAAAGGGCCTGCTTAAGGAATCCTGTTAAGATTGAAGCCGCAACCAAATATTCCACAGTAGACACCTTGAAGCAGGAATATTGTTTTATCCCTGCAAAATATAAGGAGTGTTATCTTGTCTATATCTTAACTGAGTTGTCTGGTTCTACATCAATGGTCTTCACTCGCACTTGTGATGCTACTCGCCTTCTATCATTGATTCTTCGAAATCTCGGATTAAGAGCCATTCCCATAAGTGGTCAGATGACCCAGCCAAAGAGACTTGGAGCCTTAAATAAGTTCAAGGCCGGAGAGTGCAATGTTCTCATCTGCACCGATGTCGCTAGCAGAGGACTTGATATTCCGTCTGTGGATATGGTCATAAATTACGATATTCCTTCTAATTCCAAGGATTACATACATAGAGTGGGAAGAACTGCTCGCGCAGGTCGTTCTGGGGTTGCCATTTCATTAGTTAATCAGTATGAATTAGAGTGGTATATGCAAATAGAGAAGCTCATAGGAAAAAAGCTACCACAGTTTCCCGCTCAGGAAGAGGAAGTTTTGATGATGTTAGAGCGTGTGGCAGAGGCAAAGAGAATATCTATTATGAAAATTAAAGAAGAGGGTAGCAAAAAAAGGAGGAGAGGTGGAGACGATGACGACAACGACGAGGTCGAAAAGTACCTCAAGACTGGAAAGAATGGGAAGATGCCCAAGAATGGGAAGAAAATGTACAAACAGATGAAAAGATAA

Protein sequence

MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYLVYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDDNDEVEKYLKTGKNGKMPKNGKKMYKQMKR

Homology

[Close]

BLAST of Sed0018876.1 vs. NCBI nr
Match: XP_008437560.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo] >KAA0042572.1 DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo var. makuwa] >TYK05976.1 DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 793.9 bits (2049), Expect = 7.2e-226
Identity = 413/449 (91.98%), Postives = 430/449 (95.77%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTF+ LGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDD---DN 420
           Y+QIEKLIGKKLPQF AQEEEVLM+LERV EAKRIS+MKIKE G KKRRRGGDD+   DN
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGDDEDDNDN 420

Query: 421 DEVEKYL-KTGKNGKMPKNGKKMYKQMKR 446
           ++VEKYL KTGK GKM KNGK   K+MKR
Sbjct: 421 NDVEKYLRKTGKGGKMSKNGKTS-KKMKR 448

[Close]

BLAST of Sed0018876.1 vs. NCBI nr
Match: XP_011654632.1 (DEAD-box ATP-dependent RNA helicase 10 [Cucumis sativus] >KGN49894.1 hypothetical protein Csa_000132 [Cucumis sativus])

HSP 1 Score: 790.8 bits (2041), Expect = 6.1e-225
Identity = 413/450 (91.78%), Postives = 431/450 (95.78%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTF+ LGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNE-EVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPH++VGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDD---N 420
           Y+QIEKLIGKKLPQF AQEEEVLM+LERVAEAKRIS+MKIKE G +KRRRGGDDDD   N
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKETGGRKRRRGGDDDDDNEN 420

Query: 421 DEVEKY--LKTGKNGKMPKNGKKMYKQMKR 446
           ++VEKY  LKTGK GKM KNGK   K+MKR
Sbjct: 421 NDVEKYLRLKTGKGGKMSKNGKTS-KKMKR 448

[Close]

BLAST of Sed0018876.1 vs. NCBI nr
Match: XP_022957788.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022957789.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022995218.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita maxima] >XP_022995219.1 DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita maxima] >KAG7035728.1 DEAD-box ATP-dependent RNA helicase 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 788.9 bits (2036), Expect = 2.3e-224
Identity = 411/443 (92.78%), Postives = 425/443 (95.94%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTFKDLGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFKDLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEIL+E
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEILDE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQEYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRR-GGDDDDND- 420
           Y+QIEKLIGKKLPQF AQEEEVLM+ +RVAEAKRISIMKIKE G KKRRR GGDDDDND 
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDD 420

Query: 421 -EVEKY--LKTGKNGKMPKNGKK 439
            +VEKY  LK+GKNGKM K   K
Sbjct: 421 NDVEKYLRLKSGKNGKMSKKFNK 443

[Close]

BLAST of Sed0018876.1 vs. NCBI nr
Match: XP_023534735.1 (DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 786.6 bits (2030), Expect = 1.2e-223
Identity = 410/443 (92.55%), Postives = 424/443 (95.71%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTFKDLGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFKDLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEIL+E
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEILDE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQEYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRR-GGDDDDND- 420
           Y+QIEKLIGKKLPQF AQEEEVLM+ +RVAEAKRISI KIKE G KKRRR GGDDDDND 
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLFDRVAEAKRISITKIKESGGKKRRRGGGDDDDNDD 420

Query: 421 -EVEKY--LKTGKNGKMPKNGKK 439
            +VEKY  LK+GKNGKM K   K
Sbjct: 421 NDVEKYLRLKSGKNGKMSKKFNK 443

[Close]

BLAST of Sed0018876.1 vs. NCBI nr
Match: KAG6605763.1 (DEAD-box ATP-dependent RNA helicase 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 783.1 bits (2021), Expect = 1.3e-222
Identity = 409/443 (92.33%), Postives = 423/443 (95.49%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTFKDLGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFKDLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEIL+E
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEILDE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQEYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ   LGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQVLLLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRR-GGDDDDND- 420
           Y+QIEKLIGKKLPQF AQEEEVLM+ +RVAEAKRISIMKIKE G KKRRR GGDDDDND 
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDD 420

Query: 421 -EVEKY--LKTGKNGKMPKNGKK 439
            +VEKY  LK+GKNGKM K   K
Sbjct: 421 NDVEKYLRLKSGKNGKMSKKFNK 443

[Close]

BLAST of Sed0018876.1 vs. ExPASy Swiss-Prot
Match: Q8GY84 (DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 PE=1 SV=2)

HSP 1 Score: 645.2 bits (1663), Expect = 5.4e-184
Identity = 337/458 (73.58%), Postives = 394/458 (86.03%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           ME++NE  VKTF +LG+ E+LV ACE LGW NPSKIQAEA+P ALEGKD+IGLAQTGSGK
Sbjct: 1   MEEENE-VVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGK 60

Query: 61  TGAFALPILQALL-----AAPQ-------AFFACVLSPTRELAIQISEQFEALGSGIGIK 120
           TGAFA+PILQALL     + P+       AFFACVLSPTRELAIQI+EQFEALG+ I ++
Sbjct: 61  TGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLR 120

Query: 121 CAPLVGGVDMVQQAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNE 180
           CA LVGG+D +QQ I L KRPH+IV TPGRL DH+S+TKGFSL++LKYLVLDEADRLLNE
Sbjct: 121 CAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNE 180

Query: 181 DFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEY 240
           DFEKS+++IL EIP ER+T+LFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+Y
Sbjct: 181 DFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQY 240

Query: 241 CFIPAKYKECYLVYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKR 300
            F+ AKYK+CYLVYIL+E+  STSM+FTRTCD TR L+L+LR+LG RAIPISGQMTQ KR
Sbjct: 241 RFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKR 300

Query: 301 LGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGV 360
           LGALNKFKAGECN+L+CTDVASRGLDIPSVD+VINYDIP+NSKDYIHRVGRTARAGRSGV
Sbjct: 301 LGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGV 360

Query: 361 AISLVNQYELEWYMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKR 420
            ISLVNQYELEWY+QIEKLIGKKLP++PA+E+EVL +LERVAEAK++S M +KE G +KR
Sbjct: 361 GISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKR 420

Query: 421 RRGGDDDDNDEVEKYLKTGKN-GKMPKNGKKMYKQMKR 446
           R  G+DD  +E E++L   K+ G   + G K  K  K+
Sbjct: 421 R--GEDD--EESERFLGGNKDRGNKERGGNKDKKSSKK 453

[Close]

BLAST of Sed0018876.1 vs. ExPASy Swiss-Prot
Match: A2XKG2 (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN=RH10 PE=1 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 6.5e-161
Identity = 282/437 (64.53%), Postives = 354/437 (81.01%), Query Frame = 0


Query: 11  TFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 70
           TF +LG+  +LV AC+++GW  P++IQAEAIPHALEG+DLIGL QTGSGKTGAFALPI+Q
Sbjct: 42  TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101

Query: 71  ALLA--APQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLAKR 130
           ALL    PQA FACVLSPTRELA QI +QFEALGS IG+ C  LVGGVD VQQA++LAKR
Sbjct: 102 ALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKR 161

Query: 131 PHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTY 190
           PHI+VGTPGRL+DHL++TKGFSL  LKYLVLDEAD+LLN +F+K++D+ILN IP+ERRT+
Sbjct: 162 PHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTF 221

Query: 191 LFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYLVYILTELS 250
           LFSATMT KV KLQRACLRNPVK+E A+KYSTVDTL+QE+ F+PA YK+C+LV++L EL 
Sbjct: 222 LFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVLNELP 281

Query: 251 GSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLICTDV 310
           GS  M+F RTC++TRLL+L LRNL  +AI ISGQM+Q KRLGALN+FK  +CN+LICTDV
Sbjct: 282 GSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDV 341

Query: 311 ASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQIEKLI 370
           ASRGLDI  VD+VINYDIP NSKDY+HRVGRTARAG +G A+SLVNQYE  W+  IEKL+
Sbjct: 342 ASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKLL 401

Query: 371 GKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDDNDEVEKYLKTGK 430
           G ++P       E++++ ER++++KRI++  +KE G  K++R  ++DD +E E      +
Sbjct: 402 GYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEE------R 461

Query: 431 NGKMPKNGKKMYKQMKR 446
           N  + +  K   K  +R
Sbjct: 462 NAPVSRKSKSFNKSRRR 472

[Close]

BLAST of Sed0018876.1 vs. ExPASy Swiss-Prot
Match: Q7Y183 (DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RH10 PE=2 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 6.5e-161
Identity = 282/437 (64.53%), Postives = 354/437 (81.01%), Query Frame = 0


Query: 11  TFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 70
           TF +LG+  +LV AC+++GW  P++IQAEAIPHALEG+DLIGL QTGSGKTGAFALPI+Q
Sbjct: 42  TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101

Query: 71  ALLA--APQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLAKR 130
           ALL    PQA FACVLSPTRELA QI +QFEALGS IG+ C  LVGGVD VQQA++LAKR
Sbjct: 102 ALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKR 161

Query: 131 PHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTY 190
           PHI+VGTPGRL+DHL++TKGFSL  LKYLVLDEAD+LLN +F+K++D+ILN IP+ERRT+
Sbjct: 162 PHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTF 221

Query: 191 LFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYLVYILTELS 250
           LFSATMT KV KLQRACLRNPVK+E A+KYSTVDTL+QE+ F+PA YK+C+LV++L EL 
Sbjct: 222 LFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVLNELP 281

Query: 251 GSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLICTDV 310
           GS  M+F RTC++TRLL+L LRNL  +AI ISGQM+Q KRLGALN+FK  +CN+LICTDV
Sbjct: 282 GSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDV 341

Query: 311 ASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQIEKLI 370
           ASRGLDI  VD+VINYDIP NSKDY+HRVGRTARAG +G A+SLVNQYE  W+  IEKL+
Sbjct: 342 ASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMIEKLL 401

Query: 371 GKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDDNDEVEKYLKTGK 430
           G ++P       E++++ ER++++KRI++  +KE G  K++R  ++DD +E E      +
Sbjct: 402 GYEIPDRKVDNAEIMILRERISDSKRIALTTMKEGGGHKKKRRKNEDDEEEEE------R 461

Query: 431 NGKMPKNGKKMYKQMKR 446
           N  + +  K   K  +R
Sbjct: 462 NAPVSRKSKSFNKSRRR 472

[Close]

BLAST of Sed0018876.1 vs. ExPASy Swiss-Prot
Match: Q9CWX9 (Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2 SV=2)

HSP 1 Score: 547.0 bits (1408), Expect = 2.0e-154
Identity = 272/432 (62.96%), Postives = 346/432 (80.09%), Query Frame = 0


Query: 6   EGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFA 65
           E + KTFKDLG+ + L +AC+ LGW  P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFA
Sbjct: 20  EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79

Query: 66  LPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINL 125
           LPIL ALL  PQ  FA VL+PTRELA QISEQFEALGS IG++CA +VGG+D + Q++ L
Sbjct: 80  LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 139

Query: 126 AKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRER 185
           AK+PHI++ TPGRL+DHL NTKGF+LR LKYLV+DEADR+LN DFE  +D+IL  IPR+R
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199

Query: 186 RTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYLVYILT 245
           +T+LFSATMTKKV+KLQRA L+NPVK   ++KY TV+ L+Q Y FIP+K+K+ YLVYIL 
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 259

Query: 246 ELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLIC 305
           EL+G++ M+F  TC+ T+  +L+LRNLG  AIP+ GQM+Q KRLG+LNKFKA   ++L+ 
Sbjct: 260 ELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLA 319

Query: 306 TDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQIE 365
           TDVASRGLDIP VD+V+N+DIP++SKDYIHRVGRTARAGRSG AI+ V QY++E + +IE
Sbjct: 320 TDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIE 379

Query: 366 KLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRR---GGDDDDNDEVEK 425
            LIGKKLP FP Q+EEV+M+ ERV EA+R + M+++E G KK+R+    GDDDD +    
Sbjct: 380 HLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDDDDKEGAIG 439

Query: 426 YLKTGKNGKMPK 435
                  GKM K
Sbjct: 440 VRNKVAGGKMKK 451

[Close]

BLAST of Sed0018876.1 vs. ExPASy Swiss-Prot
Match: Q29S22 (Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 1.3e-153
Identity = 274/438 (62.56%), Postives = 351/438 (80.14%), Query Frame = 0


Query: 8   DVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALP 67
           + KTFKDLG+ + L +AC+ LGWT P+KIQ EAIP AL+G+D+IGLA+TGSGKTGAFALP
Sbjct: 24  ETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALP 83

Query: 68  ILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLAK 127
           IL ALL  PQ  FA VL+PTRELA QISEQFEALGS IG++CA +VGG+D + Q++ LAK
Sbjct: 84  ILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAK 143

Query: 128 RPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRT 187
           +PHI++ TPGRL+DHL NTKGF+LR LKYLV+DEADR+LN DFE  +D+IL  IPR+R+T
Sbjct: 144 KPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKT 203

Query: 188 YLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYLVYILTEL 247
           +LFSATMTKKV+KLQRA L+NPVK   ++KY TV+ L+Q Y FIP+K+K+ YLVYIL EL
Sbjct: 204 FLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNEL 263

Query: 248 SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLICTD 307
           +G++ M+F  TC+ T+  +L+LRNLG  AIP+ GQM+Q KRLG+LNKFKA   ++L+ TD
Sbjct: 264 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATD 323

Query: 308 VASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQIEKL 367
           VASRGLDIP VD+V+N+DIP++SKDYIHRVGRTARAGRSG AI+ V QY++E + +IE L
Sbjct: 324 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHL 383

Query: 368 IGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDDNDEVEKYLKTG 427
           IGKKLP FP Q++EV+M+ ERV EA+R + M+++E G KK+R   D  DND+ E  +  G
Sbjct: 384 IGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDVGDNDDTEGAI--G 443

Query: 428 KNGKMPKNGKKMYKQMKR 446
              K+   G KM K+  R
Sbjct: 444 VRNKVA--GGKMKKRKGR 457

[Close]

BLAST of Sed0018876.1 vs. ExPASy TrEMBL
Match: A0A5D3C6L0 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00720 PE=3 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 3.5e-226
Identity = 413/449 (91.98%), Postives = 430/449 (95.77%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTF+ LGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDD---DN 420
           Y+QIEKLIGKKLPQF AQEEEVLM+LERV EAKRIS+MKIKE G KKRRRGGDD+   DN
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGDDEDDNDN 420

Query: 421 DEVEKYL-KTGKNGKMPKNGKKMYKQMKR 446
           ++VEKYL KTGK GKM KNGK   K+MKR
Sbjct: 421 NDVEKYLRKTGKGGKMSKNGKTS-KKMKR 448

[Close]

BLAST of Sed0018876.1 vs. ExPASy TrEMBL
Match: A0A1S3AUW6 (DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo OX=3656 GN=LOC103482938 PE=3 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 3.5e-226
Identity = 413/449 (91.98%), Postives = 430/449 (95.77%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTF+ LGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDD---DN 420
           Y+QIEKLIGKKLPQF AQEEEVLM+LERV EAKRIS+MKIKE G KKRRRGGDD+   DN
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLLERVTEAKRISLMKIKETGGKKRRRGGDDEDDNDN 420

Query: 421 DEVEKYL-KTGKNGKMPKNGKKMYKQMKR 446
           ++VEKYL KTGK GKM KNGK   K+MKR
Sbjct: 421 NDVEKYLRKTGKGGKMSKNGKTS-KKMKR 448

[Close]

BLAST of Sed0018876.1 vs. ExPASy TrEMBL
Match: A0A0A0KM04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139720 PE=3 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 3.0e-225
Identity = 413/450 (91.78%), Postives = 431/450 (95.78%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTF+ LGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNE-EVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPH++VGTPGRLVDHL+NTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE
Sbjct: 121 QAINLAKRPHVVVGTPGRLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQ+YCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQQYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           N+LICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDD---N 420
           Y+QIEKLIGKKLPQF AQEEEVLM+LERVAEAKRIS+MKIKE G +KRRRGGDDDD   N
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLLERVAEAKRISLMKIKETGGRKRRRGGDDDDDNEN 420

Query: 421 DEVEKY--LKTGKNGKMPKNGKKMYKQMKR 446
           ++VEKY  LKTGK GKM KNGK   K+MKR
Sbjct: 421 NDVEKYLRLKTGKGGKMSKNGKTS-KKMKR 448

[Close]

BLAST of Sed0018876.1 vs. ExPASy TrEMBL
Match: A0A6J1K797 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490827 PE=3 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 411/443 (92.78%), Postives = 425/443 (95.94%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTFKDLGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFKDLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEIL+E
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEILDE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQEYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRR-GGDDDDND- 420
           Y+QIEKLIGKKLPQF AQEEEVLM+ +RVAEAKRISIMKIKE G KKRRR GGDDDDND 
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDD 420

Query: 421 -EVEKY--LKTGKNGKMPKNGKK 439
            +VEKY  LK+GKNGKM K   K
Sbjct: 421 NDVEKYLRLKSGKNGKMSKKFNK 443

[Close]

BLAST of Sed0018876.1 vs. ExPASy TrEMBL
Match: A0A6J1H304 (DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita moschata OX=3662 GN=LOC111459226 PE=3 SV=1)

HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 411/443 (92.78%), Postives = 425/443 (95.94%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           MEQDNE +VKTFKDLGICEQLV+AC+SLGW NPSKIQAEAIPHALEGKDLIGLAQTGSGK
Sbjct: 1   MEQDNEEEVKTFKDLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60

Query: 61  TGAFALPILQALLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQ 120
           TGAFALPILQALL APQAFFACVLSPTRELAIQI+EQFEALGSGIGIKCA LVGGVDMVQ
Sbjct: 61  TGAFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQ 120

Query: 121 QAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNE 180
           QAINLAKRPHI+VGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDF+KSIDEIL+E
Sbjct: 121 QAINLAKRPHIVVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFQKSIDEILDE 180

Query: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYL 240
           IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQEYCFIPAKYKECYL
Sbjct: 181 IPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQEYCFIPAKYKECYL 240

Query: 241 VYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGEC 300
           VYILTE+SGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQ KRLGALNKFKAGEC
Sbjct: 241 VYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQAKRLGALNKFKAGEC 300

Query: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360
           NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW
Sbjct: 301 NVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 360

Query: 361 YMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRR-GGDDDDND- 420
           Y+QIEKLIGKKLPQF AQEEEVLM+ +RVAEAKRISIMKIKE G KKRRR GGDDDDND 
Sbjct: 361 YIQIEKLIGKKLPQFSAQEEEVLMLFDRVAEAKRISIMKIKESGGKKRRRGGGDDDDNDD 420

Query: 421 -EVEKY--LKTGKNGKMPKNGKK 439
            +VEKY  LK+GKNGKM K   K
Sbjct: 421 NDVEKYLRLKSGKNGKMSKKFNK 443

[Close]

BLAST of Sed0018876.1 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 645.2 bits (1663), Expect = 3.9e-185
Identity = 337/458 (73.58%), Postives = 394/458 (86.03%), Query Frame = 0


Query: 1   MEQDNEGDVKTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGK 60
           ME++NE  VKTF +LG+ E+LV ACE LGW NPSKIQAEA+P ALEGKD+IGLAQTGSGK
Sbjct: 1   MEEENE-VVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGK 60

Query: 61  TGAFALPILQALL-----AAPQ-------AFFACVLSPTRELAIQISEQFEALGSGIGIK 120
           TGAFA+PILQALL     + P+       AFFACVLSPTRELAIQI+EQFEALG+ I ++
Sbjct: 61  TGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLR 120

Query: 121 CAPLVGGVDMVQQAINLAKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNE 180
           CA LVGG+D +QQ I L KRPH+IV TPGRL DH+S+TKGFSL++LKYLVLDEADRLLNE
Sbjct: 121 CAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNE 180

Query: 181 DFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEY 240
           DFEKS+++IL EIP ER+T+LFSATMTKKVRKLQRACLRNPVKIEAA+KYSTVDTLKQ+Y
Sbjct: 181 DFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQY 240

Query: 241 CFIPAKYKECYLVYILTELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKR 300
            F+ AKYK+CYLVYIL+E+  STSM+FTRTCD TR L+L+LR+LG RAIPISGQMTQ KR
Sbjct: 241 RFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKR 300

Query: 301 LGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGV 360
           LGALNKFKAGECN+L+CTDVASRGLDIPSVD+VINYDIP+NSKDYIHRVGRTARAGRSGV
Sbjct: 301 LGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGV 360

Query: 361 AISLVNQYELEWYMQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKR 420
            ISLVNQYELEWY+QIEKLIGKKLP++PA+E+EVL +LERVAEAK++S M +KE G +KR
Sbjct: 361 GISLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKR 420

Query: 421 RRGGDDDDNDEVEKYLKTGKN-GKMPKNGKKMYKQMKR 446
           R  G+DD  +E E++L   K+ G   + G K  K  K+
Sbjct: 421 R--GEDD--EESERFLGGNKDRGNKERGGNKDKKSSKK 453

[Close]

BLAST of Sed0018876.1 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 328.2 bits (840), Expect = 1.0e-89
Identity = 183/433 (42.26%), Postives = 272/433 (62.82%), Query Frame = 0


Query: 12  FKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQA 71
           F+ LG+ E  V+ C+ LG   P+ +Q   +P  L G+D++GLAQTGSGKT AFALPIL  
Sbjct: 60  FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119

Query: 72  LLAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLAKRPHI 131
           L   P   FA V++PTRELA Q++EQF+ALGS + ++C+ +VGG+DM+ Q ++L  RPHI
Sbjct: 120 LAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHI 179

Query: 132 IVGTPGRLVDHLSNTKGFS--LRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYL 191
           ++ TPGR+   L N           K+LVLDEADR+L+  F+  +  I   +P+ R+T L
Sbjct: 180 VITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLL 239

Query: 192 FSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFIPAKYKECYLVYILTELSG 251
           FSATMT  ++ L           EA     TVDTL Q++ F     KE YLV+IL+++  
Sbjct: 240 FSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMED 299

Query: 252 S---TSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLICT 311
               ++M+F  TC   + LSL+L  L +  I +    +Q  RL AL+KFK+G+  +L+ T
Sbjct: 300 KGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLAT 359

Query: 312 DVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQIEK 371
           DVASRGLDIP+VD+VINYDIP + +DY+HRVGRTARAGR G+A+S++ + +++   +IE+
Sbjct: 360 DVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEE 419

Query: 372 LIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEEGSKKRRRGGDDDDNDEVEKYLKT 431
            +GKK+  +  +     + + +V++AKR+++MK+ + G        +D   D  +   KT
Sbjct: 420 EVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGF-------EDKVKDRRKLKRKT 479

Query: 432 -GKNGKMPKNGKK 439
               G + K GK+
Sbjct: 480 LADKGLLKKRGKR 485

[Close]

BLAST of Sed0018876.1 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 268.9 bits (686), Expect = 7.5e-72
Identity = 157/387 (40.57%), Postives = 219/387 (56.59%), Query Frame = 0


Query: 11  TFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 70
           TF +L +   L+ ACE+LG+  P+ IQA  IP AL G+DL   A TGSGKT AFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 71  ALLAAPQAFFA---CVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLAK 130
            LL  P+  FA    +L+PTRELA+QI    + L     IKC  +VGG+ + +Q + L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 131 RPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRT 190
            P I+V TPGR++DHL N+    L  L  L+LDEADRLL   F   I E++   P+ R+T
Sbjct: 288 MPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQT 347

Query: 191 YLFSATMTKKVRKLQRACLRNPVKIEAATKYSTVDTLKQEYCFI---PAKYKECYLVYIL 250
            LFSATMT++V++L +  L  P+++ A         L +E   I       +E  L+ + 
Sbjct: 348 MLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLC 407

Query: 251 TELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLI 310
           T    S  ++F+ T  A   L ++    GL+A  + G +TQ +RL +L  F+  E + LI
Sbjct: 408 TRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLI 467

Query: 311 CTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYMQI 370
            TDVA+RGLDI  V  VINY  P     Y+HRVGRTARAGR G A++ V   +      I
Sbjct: 468 ATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVI 527

Query: 371 EKLIGKKLPQFPAQEEEVLMMLERVAE 392
            K +G KL      E+ ++   + + E
Sbjct: 528 AKKVGSKLKSRVIPEQSIVKWSQIIDE 554

[Close]

BLAST of Sed0018876.1 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 246.9 bits (629), Expect = 3.1e-65
Identity = 145/380 (38.16%), Postives = 216/380 (56.84%), Query Frame = 0


Query: 10  KTFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPIL 69
           KTF+ L + +    + + +G+   ++IQA+AIP  + G+D++G A+TGSGKT AF +P +
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213

Query: 70  QAL----LAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINL 129
           + L              V+ PTRELAIQ     + L          ++GG     +A  L
Sbjct: 214 ELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 273

Query: 130 AKRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRER 189
           AK  +++V TPGRL+DHL NT GF  + LK+LV+DEADR+L ++FE+ + +ILN +P+ R
Sbjct: 274 AKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR 333

Query: 190 RTYLFSATMTKKVRKLQRACLRNPVKIEA--ATKYSTVDTLKQEYCFIPAKYKECYLVYI 249
           +T LFSAT + KV  L R  L +PV I+     K  T + L+Q YC +P+  +  +L+  
Sbjct: 334 QTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTF 393

Query: 250 LTELSGSTS-MVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNV 309
           L    G    MVF  TC +T+  + + R +    + I G + Q KR     +F   E  +
Sbjct: 394 LKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGI 453

Query: 310 LICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARA-GRSGVAISLVNQYELEWY 369
           L+CT+VA+RGLD P VD ++ YD P N  DYIHRVGRTAR  G  G A+ ++   EL++ 
Sbjct: 454 LLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKFI 513

Query: 370 MQIEKLIGKKLPQFPAQEEE 382
             +      K  + P +E E
Sbjct: 514 QYL------KAAKIPVEEHE 527

[Close]

BLAST of Sed0018876.1 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-63
Identity = 151/402 (37.56%), Postives = 229/402 (56.97%), Query Frame = 0


Query: 11  TFKDLGICEQLVDACESLGWTNPSKIQAEAIPHALEGKDLIGLAQTGSGKTGAFALPILQ 70
           TF  L + EQ   A + +G+   ++IQA +I   LEGKD++G A+TGSGKT AF +P ++
Sbjct: 90  TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149

Query: 71  AL----LAAPQAFFACVLSPTRELAIQISEQFEALGSGIGIKCAPLVGGVDMVQQAINLA 130
            L     +        V+ PTRELAIQ     E L        + ++GG +   +A  +A
Sbjct: 150 LLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIA 209

Query: 131 KRPHIIVGTPGRLVDHLSNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERR 190
              ++++ TPGRL+DHL NTK F  + LK LV+DEADR+L E+FE+ +++IL  +P+ R+
Sbjct: 210 SGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQ 269

Query: 191 TYLFSATMTKKVRKLQRACLRNPVKIEA--ATKYSTVDTLKQEYCFIPAKYKECYLVYIL 250
           T LFSAT T KV+ L R  L +PV ++     +  T + L+Q YC +P+K +   L+  L
Sbjct: 270 TALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFL 329

Query: 251 TELSGSTSMVFTRTCDATRLLSLILRNLGLRAIPISGQMTQPKRLGALNKFKAGECNVLI 310
            +      MVF  TC + +  + I++   +    I G M Q +R      F   +  +L+
Sbjct: 330 KKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILL 389

Query: 311 CTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARA-GRSGVAISLVNQYELEW--Y 370
           CTDVA+RGLDIPSVD +I YD P    +YIHRVGRTAR  G  G A+ ++   EL++  Y
Sbjct: 390 CTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRY 449

Query: 371 MQIEKLIGKKLPQFPAQEEEVLMMLERVAEAKRISIMKIKEE 404
           ++  K+  K+L     +   V   LE+   AK  ++ K+ ++
Sbjct: 450 LKAAKVPVKELEFNEKRLSNVQSALEKCV-AKDYNLNKLAKD 490

The following BLAST results are available for this feature:

BLAST of Sed0018876.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437560.1	7.2e-226	91.98	PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Cucumis melo] >KAA0042572.1 D...	[more]
XP_011654632.1	6.1e-225	91.78	DEAD-box ATP-dependent RNA helicase 10 [Cucumis sativus] >KGN49894.1 hypothetica...	[more]
XP_022957788.1	2.3e-224	92.78	DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita moschata] >XP_022957789.1...	[more]
XP_023534735.1	1.2e-223	92.55	DEAD-box ATP-dependent RNA helicase 10-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605763.1	1.3e-222	92.33	DEAD-box ATP-dependent RNA helicase 10, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Sed0018876.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GY84	5.4e-184	73.58	DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 P...	[more]
A2XKG2	6.5e-161	64.53	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]
Q7Y183	6.5e-161	64.53	DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9CWX9	2.0e-154	62.96	Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2...	[more]
Q29S22	1.3e-153	62.56	Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV...	[more]

BLAST of Sed0018876.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6L0	3.5e-226	91.98	DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AUW6	3.5e-226	91.98	DEAD-box ATP-dependent RNA helicase 10 OS=Cucumis melo OX=3656 GN=LOC103482938 P...	[more]
A0A0A0KM04	3.0e-225	91.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139720 PE=3 SV=1	[more]
A0A6J1K797	1.1e-224	92.78	DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H304	1.1e-224	92.78	DEAD-box ATP-dependent RNA helicase 10-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Sed0018876.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60990.1	3.9e-185	73.58	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	1.0e-89	42.26	RNA helicase 36	[more]
AT4G16630.1	7.5e-72	40.57	DEA(D/H)-box RNA helicase family protein	[more]
AT5G65900.1	3.1e-65	38.16	DEA(D/H)-box RNA helicase family protein	[more]
AT3G18600.1	2.9e-63	37.56	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 29..227 e-value: 1.6E-57 score: 207.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 41..212 score: 31.785645
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 263..344 e-value: 4.9E-33 score: 125.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 239..344 e-value: 1.1E-30 score: 106.2
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 239..383 score: 22.827965
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 218..391 e-value: 6.6E-50 score: 170.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..217 e-value: 4.5E-78 score: 263.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 80..365
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 35..201 e-value: 6.7E-48 score: 162.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 401..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..445
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 7..430
None	No IPR available	PANTHER	PTHR24031:SF728	BNAC02G41920D PROTEIN	coord: 7..430
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 224..353 e-value: 2.72376E-60 score: 190.796
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 158..166
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 10..38 score: 10.401074
IPR044765	DDX47/Rrp3, DEAD-box helicase domain	CDD	cd17954	DEADc_DDX47	coord: 11..213 e-value: 7.74758E-147 score: 414.792

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0018876	Sed0018876	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018876.1-five_prime_utr	Sed0018876.1-five_prime_utr-LG05:2941966..2942153	five_prime_UTR
Sed0018876.1-five_prime_utr	Sed0018876.1-five_prime_utr-LG05:2943207..2943220	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2941966..2942153	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2943207..2943359	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2943936..2944059	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2944175..2944244	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2945182..2945244	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2945766..2945840	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2945982..2946101	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2946737..2946778	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2946866..2946940	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2947241..2947387	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2947542..2947679	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2948646..2948757	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2948841..2948929	exon
Sed0018876.1-exon	Sed0018876.1-exon-LG05:2949430..2949762	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2943221..2943359	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2943936..2944059	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2944175..2944244	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2945182..2945244	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2945766..2945840	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2945982..2946101	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2946737..2946778	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2946866..2946940	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2947241..2947387	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2947542..2947679	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2948646..2948757	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2948841..2948929	CDS
Sed0018876.1-cds	Sed0018876.1-cds-LG05:2949430..2949573	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018876.1-three_prime_utr	Sed0018876.1-three_prime_utr-LG05:2949574..2949762	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0018876.1	Sed0018876.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0016787	hydrolase activity