Sed0017907.3 (mRNA) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGTTATCTTATTGTATATATTTAGAGTTTTGAGTGATAGATATGTACCTAATGGCTATGGCTATGGCTGCGACGGGTGAGTGCAAAAATATGGCCATGGTGGTTTGACAAACCCACAAACAATAGAGAGAATTGGAATTGGAATTGGAATAGGAATATTGTATTCTAAACTGGACATGTTTCAGCTCTGTCTTATGGCTTCCACCGGATACCCTTCCGCCCTTGTTTTACACCACAGCTCGTCCACCCCAATCAAGGTACACCCACCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCCTCCCCTATTTTCATATCTGTATATATAATTCTCCTCATTTACTTCTCACAGGATTCTCACCCTTTCTTCTCAGTATGTGAAACTCCCATCGGATTGCGAAATATTCAGCCTCAACAGACCCATGAGCCATGGACCCATCAATTACTCGACCTTGACCTAAAACTTCCAACCCCCAAAATGCTCGATGCGCAAGGTTAGTTGCTTTCCTAGTTTCTATACCCCAGTCTCAACCGGCATCTATGACTCACTTCCTCCTCTGATTTGGTTGCAGACAATCACACAGACTCTTTGCTATTCAGTTCTACCAACGATGAACAATTCAAAAGGTGCAACCATGTCTTGGAGTTCCTTGTGCCATCTCCAAGTGAAGAGAATAATAACAAACGCTCATTAGATTTACCACACTTGAGGAGGAGGGGGTTGCAAGAAATGAAGACCCACCACAAAGGCCTCTTTGCTTCTTCTCTTTTCTTTCCTGCCTCTGAGTTTGATGCGCATCTACCAGTCAGGGACTTCCTAAGCGAATTGATTAGCAGCTCAAAGATTACCATTCATCCCGATGGGCAGATTTTGTTCACCCAGACTGGAACAGAGATCAAGGATTTACTTTCAATTGTTGCTGAGTTTTATTTCTCAAATAACTCATTGAGCTGGAGAAAGCACTCAATTCTTGTCCCAAACTATGTTAGGTACATAATTTCTCTACCTATATTATTATCAATGAAAAGTTTGTTTCTCATTAATATGTTTATACAGTTATCTACACACATACACTATTGGTTTCTGAATAGTAATTTGACAGACGCAGTATTCCACCCATGTATTCGCACCAACATTTTTTCGTTCTACATTCATGATGTTGGAGTGTGAGTAATTCTCCTCTCTCACTCATGCACATTTCTGCACTTCACCAGTTATTAGTTTGTCTGGCAAAATGATAAGGGCTTCACTTTTCTGAGAGTCTAAAATATATGGTTGGTATTTTGTTAAAGTTTGTGCCCAAGTTGTTCTTTCTCTGTGCTGGAACAATAAAATTCATATACTATTTTCTATTTTCCAACAAGTGGGAAAATTCACCAGTAAATGAGTTTTCATGCAAAACGTCAGATTTTGATTAATATTTATGAAGAATTGTTGAAACAATGACATACATAGCTAAATAGAAGTTACTATTATAACTCTTTAGCCTAGAGTACAATCCAACTTAACCGTAGTTATCTTATTTTCTCGTACAAGCTAGCAACTAGCAAGATATTGAAGAAGGTTAAGTGCTTTGAAGTTTCATTTTCTACTTGTCTTCATAATTAAAGAGGAACATCATTGCGAACTCACAGTACTGTTATTTTTCTTTTTTTTATTGTTACTTTTACTAGAAATAGGTTCTTATCATGATAAGATATTTTGGATAAACAATGTAACCATTGAAATCCTCTATCTTAACAAATTTGAGACCTTAGACAAGATAGATGGATGTAAGCTAAGACTGCAAGCATTCTGTGTCCAGGTTGAATGGTGAAGTGGGAAGCCATGTTTATGATCCTTCCGTGAAGCTTCATGCAACAACAATTGCTCCTATAAAGAGGTATGTGCAGCATGCCTACTCATATAAGTCTTATTCTTTTCTCTCGTCTATTGTTGAGCAGCAACCACTTAACCTTGCTGCAATGTAAGTTCAATTGCTGCATATTCTTTCATGATTGCGTTCAACCGGAGATGTCTAGACAAAAGTAAGATCACAGAAGCGTAGAAAATGAATATGATTCTATTTCTACTGAATAATTTTCTTGATTGTTTAATTCTATTGACGTGGTAGTTATTTTTCTAGAGTGACGGCCTTTTCTGATAGAAATGCTTCAGGTGTATACACCATAGGTAAACAAAGCTTATCAGGACTGGAGTAGCATAAGGTTAGGAGTGCTCAATCCTATCAGAAGTAGGATAAGAATACGAGATTATAAATAAGAAAGGGTGGAGAAGGAAAAAACATATTAAGAAACATTGATATAGTGAGTGGTTAAGGCTTGCGGATGATCTCAAGATAAAAGAAGGGTTCAATTACCTTCGACACTCGAATTATCTTGTGGCTCTAAAAACACTCGTGTTATCTTTTCACATCTATACATTTTTTTGTTCATATCAATTTGGTTCCGGAGTGGTATCATTTTCTCTCTCTTGAAAACGTGGCTTTTCTCTGCCCAAACAGTTTTGTGGAGAAAAAAAACTACCAATGCTGACCACATGTTTTTTTGGAGTGATATTTTTTATCCTTCGCGGACAAAAAGGAAAAAAACAAAACAAACTATTGCCATCAGGTGTTTAATGGGCAGAGTAGTCTAAATATCGTAGAACAACAACCAATCAATGTTAGCCTTTCATTTTGCTGATGAAATTTGCTTGTTTTTTTTTAGACTTACAGAACTCCTGTTTGTGTATTTGACAGCCCTGATACAGTGAAGGTGAAGCCATCACGAAAAAGGAGAATGAGTAAGAAAGTAGGGCGTGAGAGAGATCTGTACAAGAGAAATTATTTCCACGCATGCGAGAGCCTCCTATCCTATATGTTCAACAAGCAGCGGCATGGGAAAAGGGCAATACTGTGTTTAAAGAATTGTGGGCGAGAGCTTCCTGAGCTTCTTACTCAGTTGTCTGCTGGTATTGCTGGGACTGGTCTTGTTGTCATTCTCTCTGTCATGTGTAAGCTTGCTTGGGGAAGAGTGCCATTCTGTTCTTCTCAACTTCTGAACACTGGATTTGGTGTGGGTCTGGTTTGGCTATCTTGTGCTGTGAACAAACTGAGGGATACAATAATCTGCATCAGCAAGAAAGCAGGCAAGGTCGGGTTGAAGGAAGACGAGATGACGAGGAGAGTGGATAAGAGCGTAAATGAGATCTTCTTCAGAGCGGCAGCTATAATGACAGTAGCAATCTTGAGAATTGGTTAGCTGATACTGATGTAAGTGTAGAGTTGGTGGTTAGCTTAACCACGAGTGTGCAAAAAACTGAATCATTCTGGGCACTGAGCTCAGCTTCTTGTGTCTGTTTGGTTGGTTCTGTTGGGGGTTTACACTGTCAAATATTTGAAACAGATCGCAGGAGTAGTAATTAGTAATACAATTTTGTTCTTTAAACGTGTTTGTTTTCCCTCTCCTCTTTAGATTCGAGTACTAGACAACAAGGCAAGAGGAACACACAACGTCAAACGAGCTCGAGCGAGAATACAACAGATCAACACCCACCTCTCTCACTCCCCTTTCTAGTTTTTTTTTTTTTTGTTTGAAAAATCAAATATTATGAAAGCTAAATACTGATATCTGGGTCACAAATTCTGAAGTTGAAATAGAATAATATTAAACAAGACAACTAAGTATGCTACCAGTCCATTCG GTGTTATCTTATTGTATATATTTAGAGTTTTGAGTGATAGATATGTACCTAATGGCTATGGCTATGGCTGCGACGGGTGAGTGCAAAAATATGGCCATGGTGGTTTGACAAACCCACAAACAATAGAGAGAATTGGAATTGGAATTGGAATAGGAATATTGTATTCTAAACTGGACATGTTTCAGCTCTGTCTTATGGCTTCCACCGGATACCCTTCCGCCCTTGTTTTACACCACAGCTCGTCCACCCCAATCAAGGATTCTCACCCTTTCTTCTCAGTATGTGAAACTCCCATCGGATTGCGAAATATTCAGCCTCAACAGACCCATGAGCCATGGACCCATCAATTACTCGACCTTGACCTAAAACTTCCAACCCCCAAAATGCTCGATGCGCAAGACAATCACACAGACTCTTTGCTATTCAGTTCTACCAACGATGAACAATTCAAAAGGTGCAACCATGTCTTGGAGTTCCTTGTGCCATCTCCAAGTGAAGAGAATAATAACAAACGCTCATTAGATTTACCACACTTGAGGAGGAGGGGGTTGCAAGAAATGAAGACCCACCACAAAGGCCTCTTTGCTTCTTCTCTTTTCTTTCCTGCCTCTGAGTTTGATGCGCATCTACCAGTCAGGGACTTCCTAAGCGAATTGATTAGCAGCTCAAAGATTACCATTCATCCCGATGGGCAGATTTTGTTCACCCAGACTGGAACAGAGATCAAGGATTTACTTTCAATTGTTGCTGAGTTTTATTTCTCAAATAACTCATTGAGCTGGAGAAAGCACTCAATTCTTGTCCCAAACTATGTTAGGTTGAATGGTGAAGTGGGAAGCCATGTTTATGATCCTTCCGTGAAGCTTCATGCAACAACAATTGCTCCTATAAAGAGCCCTGATACAGTGAAGGTGAAGCCATCACGAAAAAGGAGAATGAGTAAGAAAGTAGGGCGTGAGAGAGATCTGTACAAGAGAAATTATTTCCACGCATGCGAGAGCCTCCTATCCTATATGTTCAACAAGCAGCGGCATGGGAAAAGGGCAATACTGTGTTTAAAGAATTGTGGGCGAGAGCTTCCTGAGCTTCTTACTCAGTTGTCTGCTGGTATTGCTGGGACTGGTCTTGTTGTCATTCTCTCTGTCATGTGTAAGCTTGCTTGGGGAAGAGTGCCATTCTGTTCTTCTCAACTTCTGAACACTGGATTTGGTGTGGGTCTGGTTTGGCTATCTTGTGCTGTGAACAAACTGAGGGATACAATAATCTGCATCAGCAAGAAAGCAGGCAAGGTCGGGTTGAAGGAAGACGAGATGACGAGGAGAGTGGATAAGAGCGTAAATGAGATCTTCTTCAGAGCGGCAGCTATAATGACAGTAGCAATCTTGAGAATTGGTTAGCTGATACTGATGTAAGTGTAGAGTTGGTGGTTAGCTTAACCACGAGTGTGCAAAAAACTGAATCATTCTGGGCACTGAGCTCAGCTTCTTGTGTCTGTTTGGTTGGTTCTGTTGGGGGTTTACACTGTCAAATATTTGAAACAGATCGCAGGAGTAGTAATTAGTAATACAATTTTGTTCTTTAAACGTGTTTGTTTTCCCTCTCCTCTTTAGATTCGAGTACTAGACAACAAGGCAAGAGGAACACACAACGTCAAACGAGCTCGAGCGAGAATACAACAGATCAACACCCACCTCTCTCACTCCCCTTTCTAGTTTTTTTTTTTTTTGTTTGAAAAATCAAATATTATGAAAGCTAAATACTGATATCTGGGTCACAAATTCTGAAGTTGAAATAGAATAATATTAAACAAGACAACTAAGTATGCTACCAGTCCATTCG ATGTTTCAGCTCTGTCTTATGGCTTCCACCGGATACCCTTCCGCCCTTGTTTTACACCACAGCTCGTCCACCCCAATCAAGGATTCTCACCCTTTCTTCTCAGTATGTGAAACTCCCATCGGATTGCGAAATATTCAGCCTCAACAGACCCATGAGCCATGGACCCATCAATTACTCGACCTTGACCTAAAACTTCCAACCCCCAAAATGCTCGATGCGCAAGACAATCACACAGACTCTTTGCTATTCAGTTCTACCAACGATGAACAATTCAAAAGGTGCAACCATGTCTTGGAGTTCCTTGTGCCATCTCCAAGTGAAGAGAATAATAACAAACGCTCATTAGATTTACCACACTTGAGGAGGAGGGGGTTGCAAGAAATGAAGACCCACCACAAAGGCCTCTTTGCTTCTTCTCTTTTCTTTCCTGCCTCTGAGTTTGATGCGCATCTACCAGTCAGGGACTTCCTAAGCGAATTGATTAGCAGCTCAAAGATTACCATTCATCCCGATGGGCAGATTTTGTTCACCCAGACTGGAACAGAGATCAAGGATTTACTTTCAATTGTTGCTGAGTTTTATTTCTCAAATAACTCATTGAGCTGGAGAAAGCACTCAATTCTTGTCCCAAACTATGTTAGGTTGAATGGTGAAGTGGGAAGCCATGTTTATGATCCTTCCGTGAAGCTTCATGCAACAACAATTGCTCCTATAAAGAGCCCTGATACAGTGAAGGTGAAGCCATCACGAAAAAGGAGAATGAGTAAGAAAGTAGGGCGTGAGAGAGATCTGTACAAGAGAAATTATTTCCACGCATGCGAGAGCCTCCTATCCTATATGTTCAACAAGCAGCGGCATGGGAAAAGGGCAATACTGTGTTTAAAGAATTGTGGGCGAGAGCTTCCTGAGCTTCTTACTCAGTTGTCTGCTGGTATTGCTGGGACTGGTCTTGTTGTCATTCTCTCTGTCATGTGTAAGCTTGCTTGGGGAAGAGTGCCATTCTGTTCTTCTCAACTTCTGAACACTGGATTTGGTGTGGGTCTGGTTTGGCTATCTTGTGCTGTGAACAAACTGAGGGATACAATAATCTGCATCAGCAAGAAAGCAGGCAAGGTCGGGTTGAAGGAAGACGAGATGACGAGGAGAGTGGATAAGAGCGTAAATGAGATCTTCTTCAGAGCGGCAGCTATAATGACAGTAGCAATCTTGAGAATTGGTTAG MFQLCLMASTGYPSALVLHHSSSTPIKDSHPFFSVCETPIGLRNIQPQQTHEPWTHQLLDLDLKLPTPKMLDAQDNHTDSLLFSSTNDEQFKRCNHVLEFLVPSPSEENNNKRSLDLPHLRRRGLQEMKTHHKGLFASSLFFPASEFDAHLPVRDFLSELISSSKITIHPDGQILFTQTGTEIKDLLSIVAEFYFSNNSLSWRKHSILVPNYVRLNGEVGSHVYDPSVKLHATTIAPIKSPDTVKVKPSRKRRMSKKVGRERDLYKRNYFHACESLLSYMFNKQRHGKRAILCLKNCGRELPELLTQLSAGIAGTGLVVILSVMCKLAWGRVPFCSSQLLNTGFGVGLVWLSCAVNKLRDTIICISKKAGKVGLKEDEMTRRVDKSVNEIFFRAAAIMTVAILRIG Homology
BLAST of Sed0017907.3 vs. NCBI nr
Match: XP_038888370.1 (uncharacterized protein LOC120078216 [Benincasa hispida]) HSP 1 Score: 534.3 bits (1375), Expect = 9.4e-148 Identity = 285/423 (67.38%), Postives = 333/423 (78.72%), Query Frame = 0
BLAST of Sed0017907.3 vs. NCBI nr
Match: XP_008449465.1 (PREDICTED: uncharacterized protein LOC103491343 [Cucumis melo] >KAA0057287.1 uncharacterized protein E6C27_scaffold280G001280 [Cucumis melo var. makuwa] >TYK13445.1 uncharacterized protein E5676_scaffold496G00670 [Cucumis melo var. makuwa]) HSP 1 Score: 533.1 bits (1372), Expect = 2.1e-147 Identity = 283/423 (66.90%), Postives = 334/423 (78.96%), Query Frame = 0
BLAST of Sed0017907.3 vs. NCBI nr
Match: XP_004140087.1 (uncharacterized protein LOC101221139 [Cucumis sativus] >KGN47878.1 hypothetical protein Csa_003575 [Cucumis sativus]) HSP 1 Score: 519.2 bits (1336), Expect = 3.1e-143 Identity = 278/423 (65.72%), Postives = 328/423 (77.54%), Query Frame = 0
BLAST of Sed0017907.3 vs. NCBI nr
Match: XP_022967418.1 (uncharacterized protein LOC111466962 [Cucurbita maxima]) HSP 1 Score: 516.2 bits (1328), Expect = 2.6e-142 Identity = 279/423 (65.96%), Postives = 327/423 (77.30%), Query Frame = 0
BLAST of Sed0017907.3 vs. NCBI nr
Match: XP_023554065.1 (uncharacterized protein LOC111811444 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 515.0 bits (1325), Expect = 5.9e-142 Identity = 277/423 (65.48%), Postives = 327/423 (77.30%), Query Frame = 0
BLAST of Sed0017907.3 vs. ExPASy TrEMBL
Match: A0A5A7URL6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00670 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 1.0e-147 Identity = 283/423 (66.90%), Postives = 334/423 (78.96%), Query Frame = 0
BLAST of Sed0017907.3 vs. ExPASy TrEMBL
Match: A0A1S3BM37 (uncharacterized protein LOC103491343 OS=Cucumis melo OX=3656 GN=LOC103491343 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 1.0e-147 Identity = 283/423 (66.90%), Postives = 334/423 (78.96%), Query Frame = 0
BLAST of Sed0017907.3 vs. ExPASy TrEMBL
Match: A0A0A0KEA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409350 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 1.5e-143 Identity = 278/423 (65.72%), Postives = 328/423 (77.54%), Query Frame = 0
BLAST of Sed0017907.3 vs. ExPASy TrEMBL
Match: A0A6J1HV14 (uncharacterized protein LOC111466962 OS=Cucurbita maxima OX=3661 GN=LOC111466962 PE=4 SV=1) HSP 1 Score: 516.2 bits (1328), Expect = 1.3e-142 Identity = 279/423 (65.96%), Postives = 327/423 (77.30%), Query Frame = 0
BLAST of Sed0017907.3 vs. ExPASy TrEMBL
Match: A0A6J1HJ46 (uncharacterized protein LOC111464023 OS=Cucurbita moschata OX=3662 GN=LOC111464023 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 7.8e-140 Identity = 274/423 (64.78%), Postives = 326/423 (77.07%), Query Frame = 0
BLAST of Sed0017907.3 vs. TAIR 10
Match: AT4G02920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 208.8 bits (530), Expect = 8.4e-54 Identity = 155/428 (36.21%), Postives = 236/428 (55.14%), Query Frame = 0
BLAST of Sed0017907.3 vs. TAIR 10
Match: AT4G02920.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 207.6 bits (527), Expect = 1.9e-53 Identity = 154/427 (36.07%), Postives = 235/427 (55.04%), Query Frame = 0
BLAST of Sed0017907.3 vs. TAIR 10
Match: AT1G03340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02920.1); Has 44 Blast hits to 41 proteins in 13 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 183.7 bits (465), Expect = 2.9e-46 Identity = 118/353 (33.43%), Postives = 187/353 (52.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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