Sed0016197.1 (mRNA) Chayote v1

Overview


Name	Sed0016197.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	F-box protein SKIP17-like
Location	LG07: 3171100 .. 3180230 (+)
Sequence length	2308
RNA-Seq Expression	Sed0016197.1
Synteny	Sed0016197.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAATTCCATATTCACTCATACACGTGGCAGTCACAGGCTCGTCCGTATTCGCCCTTCTTCCTTTCTCTGGTGTCCACCCGCTGATGCTATGGACGCTCTCTTTCAAATCCAAACCTCGGCTTCATCATCCATGGCGAAGCGGCCATGTCCGTCGCAAAACCCTAGAACGCCGACCTTCGCGCACATGGACCTTCTCCTCGAGGCCTTTCTCGGCCTCTCCGACTCCTCTTCCGTCGCCATCGACCTCTCATTCGAGCGCCTTCTCGATTCCTCGCCGTCCGATTTGGATCAGTCTCGACTCATCGATCGCGCTCTTGGAATGGGCGCCTTCTTGCTCGAGGCTGGCCGGCGATCCGCGAGGAAACAAGCTACCAAGCATAACTCTGTCGTTTGGGCGCTTCCTCCTGATCTCACCTTCAAAGTATGTTCGTCTTTTCTTCTTGTTTGGTTTACGAATCGTTTGAAATCGGTTTTGATTGTGCTGCTGATTGGAAGTCGTTTGATTTGTTGATTTTGGAAATGAGTGCTCCTGTTATTGAATGTTGGATTTGGATTTTTTGCTGTTTGGTTTTGTTGTGTTGGATGTAGAATGTGCTGAAATTTTAGTGGTTGTATTGAAGTTTGGTTGAACTCAAAGCCAGTTTTCTGTCAGGAATGTGTTTTGAGAGTGAGATGTTAGTTTGGTGATGAAGGATAGAGAGATTATGCGTATGGTAGTTCATGTTTTTGTATGGGTGTAATCGAGTGGTTAGGTTAATAAGACATCTTGACATCTTAGGTTCGGTTTGATAACATTTGATTTTTTATTTTATTGAAATTTAAGCTTATTTTTACTCAAATTTCCTACGATGTATTATATCTCTACTCAATAAAGTACGTGAATACTAATTAAATTTCAGAAACCAAACAAAGTTTTTCGAAGTTACTTTTTTTTTTTCCAAATTTTGGTTTGGTTTTAAAAAGCATAGGTAAGATGTAGATATTCAAGTACGAAAAAACATATGGTGAAATAGTTATTGTAGACTTCAATTTCAAAAATAAAAAAACTTAAAACAAAATGGTTATCAAACTGGGCTTTAGTTATTTTTTAAGTTAAAGGTTATAGTATGGCCATTCTTATTTTTTAAGTTAAGGTTAGAGTATGGTCATTCTTAAAATAAAATGGTTATCAAACTGGGCTTGGGTTATTTTTTAAGTTAAGGTTAGAGTATGGCCATTCTTATTTTTCATACGTTTGAGAGATTGGAGATCATCACTCACTACCAGGTTACACCTATTTCATTCATCATCCTGTTATTTATGGTTGGTTCCATGTTGTGTTCTAACATTCATAACGTTTGATGAAGAATGATGGGTTTTGCTTGAGTGCATGATGACGAACTGTGGCTTTTCAGGTTTTTTCCATGCTTGACACTCAGAGCCTTTGCTATGCAACAGCTACTTGTTCAATGTTTCACAAGTATGCGATGGATCCTTCCTGCTATGCCAACATTGACTTAAAAACAGTTTCACCAAGAGTTAATAATGCAGTGGTTTCTACAATGATTCACCGTGCTGGAAACTCCCTTCAGTAAGATAATTTCTTTCAAAAAATCATTATCGAATTTTCGTCATTTGAATTTAAATGCTGTAATAGTATGTATACATTGAGGATTTGAAACTGAAGAATATACTTGTTTAAGCACATTAGTTATGTGGTCTTTGAATTGTCTTTTGGCCGACATAAGTTGTACATTTTGCATAAGATATTTTGACTATTCACCACCCCTAGTATTTCTGTGAAATCCAGCTGAGCCACAATTCTCATTCTTCTGACTGTCCAAGCTTAGTTAAGGAATTTTTAGCTTCCTAATCTTGCCTCATGCACCATTTCCTTTGTATTGTTGAGTGGGGAAGATGGTAAATTATTCCCTCCTGTGGTCTGTCATGATCTGAACTCTGTTTTTTCCACAACTTGAATGAAAAAGAAGTCAGGATCTTCCCACCCAAAGATTTTATTCTATTGTTTTTTTTATAACTGTGACTGTCTAGACCAGCTTGAGTGCACCTCGACTATAGTCACAGGACATACCAACGGTCCCTACAACATTTGGATGTCAAAGAAACTATAAGAAATGAATTCTTAGGTAAGTGTCAGTGTCACCATGAATTGAACTCATTATCTCTTAGTTTTCCAAGGCCCTCTTGACTACTATGCCACCCTATGATGGTTAGCTTGCTTTATTTAGCAACCATGTGGATTCTAGATGCCCCATTAAGTTCATTGAACATCCACTCTGTAATTATTTTTTTACCCTTTGTAGTGTTAGTCATTCTTCGTTGAACTATCATGTATAGTAAACTTCTTCAGCAAGAAAGGGTGGGTTTTGTGGCAGGCTAGAGTTTGTGCTATTTTGTGGGTGGTCGAACTTTTTCTTTTTTTTTGAAATTGATAAATCGAAGTTTCGCTCCACTATACATGGAGTAACCACGCCCGTTCCTAAGCCAGAGACTGAGAGACATCGAAGGAATGGAGACACAAGAGGTGTCTACAAATAAATGTCACAGGTGAGTTTCGAACCTGGAACCTTGAGGGAGCACATCTTCAAACTCCAAATTTTCAACCATTGTGCCACCCCTCGGGAGCTAAAAGAATATTCAAGTGTTGGGATAGTTCTTGTAGTGGTCATTGGTCCAATGTCATTTCTCTTTTGGCTTCTATTTCTTGGTCTTTTTTTAACCATCCCCTAGGTATTATTACTTGATTGGAGCCCCTTTTTGTAGTTAGACTCCCTTTTTGTGATTTGTTTCTATGCCCACGTATTCATTTTCTTTTTTCTCAATTACAGAACACTTTGAATCACATAATTTATTTTAAGCTTTGATAAACTTGGTTATTCGTTCCCCTCTATAATTTCAGATCTCTTAAGCTTGGTATAGTTCCTGGCCCCTCTGCATCTTCTGGATCTTGCCAACCGTTGGTTTTCAGGAACTCTGTAGATGTTACTAGCTTCTCATGGAATGACAAAAGATCCAGACAAGGGAAGGAGTCATCAGTTCTCACAAGATCCTGCTTAAGCCCTTTGGGAGGGGGCAGTAGTTCTCCTGGGTATGTGTTTACTTTTGAAGTTAAAAATATGCTCATTATGAAACAGTTCTATTTCTGAGCTGTTAAATTTTACAGGAAGCTTTTAAGAACGTTGCATCTTTACAATATTGAAAGAATAGATAGTCAATCACTTCGTGTTGCATTATCTGCTTGCCCATCTCTCCTTGATCTGGAAATCGTGGGCCTGTAAGTTTCTTTAGTTGACTAACTTTGTGGCTTTTGATTAGCTTAAACTGGAGGATGATATTTTTTAAAAAAAAAATGATGATAAACTGTTTTTCAGATCAATCTTTTGTGAATCCGAACTAAGATTTATTCAATTATTTTCCTGGTGTGTCTCACCTTTTCTCTTGATATTGTCGTGTCATTTTCCAGCAGTAGAAGGTTCCCTTCTCTTCAATAATCTCTTTCTATTTTTTCAATAAACAAATATATCAATATCATTTTTCTTTAATAGGTTCTTGACCTCTCTGGGTGTATGGTACTCTTAACTGGATGATAGTTTATTTTTTTCTTCTCGAGATTTAGTGTTCAGCTTTGTTTCTTATAAAAAAGGATTTAATGTTCAGTTAAGGACATGATAACAGGTTTTGAAGGAAATACACTCTCTGAAAATTAAATCCATTCTCTGCTTCTTTGGGTTACTCCTTTTATTTATATACTGTAGTTAATAATCCACATCCTTCATTGAACAGTCATGTGGAGTTGAGACAGACATTGATGTCTGTGATTGAAAATTGTCGATCAATAGAGCGTTTGTTCTTTGAATCATCAAAAACAGGTTTAGTATCTACCTCCTTTGATATCCTCTTTTCAGTCTTTCTAGTCATCTGCTTATTCATCTCTATTTTGAATGACAGGCAGGGATGACAGCTTGAAATCACCCACATGTGCTGATCTAGTTCACAACTGTCCTCATTTAGTGTCTTTAGCCCTTAGAGGATTTAAACTCCATGATTGTAAAGTTAGCAAACTTATTAAGGTATTCTCTGCAATTACAAGGAACTTTGTGATGCACGCATACAAAATCATTTCCCTTGCCGATTTTAGGTTTTTATATTGCAACAATATTTAACTAAGAATTTTACTAATGGTATGCTAATTATTCTGAATTTTAGGACATTGTCTTTGAAGTACGCCATGTATAACATTAATTGCATTTATAAAAAAATACTTGAATATAATCGGTATCTAAAAAAACTGTTTTAGTCTTATGTTATGATTAGGTATTTCTTTTTCATACTTTATTGTTTATTCTGCATTGTTTGATGATTAAATTATAAAAACGGTTCTGAGTCTTCAAAGTATTGGCGAGGTTTTTTTTAATTAGATTGAAGGCAATGGAAAGTAAATCATTCAATTAGTAGGCAAACGAATTTAAAAAATAATTTTGTAGCAGATGGAATTTGTATCATAAAAAGAGAGGAGTTCCTAAAAATAGGGGAGTTAGATGAGGAGCCCCGACGATGTTCCCAAGGGATGACATAGTGGTTGAAGACTTGGACTTTGAGTCCCAGGTTCGAGACTCACCTGTGACATTAATGTAAACACCTCCCGTGTCTCAATTCCTTCGATGTCTTCTAGTGCCTGGCCTAAGGATGGGTGTGGTTACCTCGGTTATAGTGGAGCTCACTTCGATTTCCAGGTTTCATAAAAAACATAAAAAAATGAGGAGACCTGACAAAAGCAAAAGTAGGATCCCAATTGACTAAAAAGGCACCAGGGTAGTCCCCGGGGTGGCACAGTGGTTGAAGACTTGGGCTTTGAGAGTATGCTCCCCTCAAGGTCCCAGGTTCGAGACTCGACTGTGACATTACTCCTTCGATGTCTCTCGGTGCTTGGCCTAGGGACGGGCATGGTTACCCTTGTTTCAAAAAAAAAAAAAAGCACCAGTCAGGGTAGCTGTTACAATGGGGAAGGCTTCTTTGAACTCTACTTTAGGTGCCTAGCTGATCTTGAGCAAAGAATCAATGGAGAACTTTCACTTTCTATGGCACTTAGCTTTCCCTTTCCTCACAAAGCTTGGACAATGGAAACTAGTCCGAGAAACCAACACTATAGATCACAAAGAATTGCTGATTTTCTCGTATAGATTGGTTCTTCCATTATCTCTTTGGCCAATTGTTGGTGGTGTTTTTTTCTTATATACTCTTGTATTGTGTAATTCCATGGTGGTTTTAATCTCATAAACTCTTCGAATACTCATTCAGGGACTTCGGAAGTTGAAATATGTTGACTTTTCAACTTCTTACTCAATTACTGGAAGCTTTCTTGGGTAACTTTTCTCTTCTGATTGGTTGTTTTTGTTGTTCCTATCCACAATAATTTTTCGATGCTTTGGATTACTATAAAGGCAATCTATGTTTCCTCAGAAACCTTGGCAACATTGGTGGTAACTTATTGGAGGTTTTGCTTTTAAGAGACTGCATGCATCTCAAAGAGGTCAGGATCATTTATTATTTTGATACCTCATTTTCCTTAATTGTATAGGTCTATTGCAAGTTTTCCTTATAGGACCTCCCCTCTAAATTTCAACTATCCATGAAATTGTTTCTTATCCAAAAAAAATATTTTGATACCCCATTTTCCTTCCATTGCTGTAAGCCTTAATTCTTTTTTGCATGCAGGTGGAAGTTGCTCGTTTCATGACATCGTTACTTGCTGGAGATTTCAAGTTTCTTCGACATCTAGTGAGCAGATGATAATTGACAATTATTTTTTTCAGAGTATCCGGTTAAGGGTTCAGAATGATATTTAATTTAATAATTACCTTATTCATCAAACAGGATATATCCAATAGGGAAGGGTTGGCATCTGAGGGTGATTGGTACGAGAGATGCTACAATTCAAGGTGATATTTCATTGAAATTTTTTTTACTATATTGCTCAATCCTTGTTTGGATATTCCCAGAAAGTTCAACTTTCATTCCCCTTTTGGCTTATATAATTTCAACTATTTATTTATCTTCCTCTTAATTAAGAAAATATTGGTCAAGGTTTCTTCGGTACCTGAGATTCCGTAGTTCTTATTAACTATTTTAATGAACAGGATCATTCCAATTGAGCAAGTAATGAAGGAAAGGCCGGATGTATGCTTGCTAGCTGATTTTCCACCAGAAGGAAGGTAATCACTGGTTAGGATTGATGTTTTGGGTATAATGGTCATATTTATTGGCGAGTTAGTCCCAACTAAGCAGATGCATATAAAGTTAGTTGAATTGGGTAAAGGATGATTTTCTTTTTTAACGTTTTGGTAGAGATATGAATTTCTATTAGTTACGAACTCTTATATTTTTATTTTTTAAACAAAATTGAACTTTTCATTTTCGATGAAAGAAACCAAAAAATGAAATTAACAAGAGAAAAGGAATTCAACCTAAATAAGAGAAATGTCGTTAAAAGCATAATTATCAAACAAAGAACACCATAGTTAATCTTTTTGGTTCATTTTTCATTATTAAAAAAAAAACTGCGGTTCTAGATTTCAGGATAGTTTTGGGCAGACTTCTGGATTTAAGATAGATGAAATTAATGAACCGAGCAGCTGAGTTTATTTTTTGGGTAAGTTGGGTGATGCATACAAAAGAATAAGGGGCAGAACCCTACATTGTTTGGTGCAATTAAGGTTAGGAATGGTGTGATTGTGTCTTTTCCCCAACAATATTGTAGTAAGATCTTTGCCTTCTCAATTTTGACAATATTGTAGTCAGAATTGCTTAGAACCTGCATAATTAGGGCACATATTGGCCTGGGAATTAATTATAGGTTAGGACAAGTGAAAAGTAAAAGTAGTTTGGAGGAATGGGCATAGGGGTTGGGTTGGGGTATACTGGTATATATACTTTGCATGTGTTCGACACTAGATATTGACTTTGGGGTGGGCTATGAATGTACCATCAAATTCTCACTATTATTGTTGTACAAGAGATACAAGAAGATGCCCCTTACGGGGGTGGAGTAACGTTAATTGTTTGGATTTGACTGTTTAAGTCATATTAACTGGTTAGTTTGTTATAGTAAAGAGTGTGGTACTGGGATTGGGATTGGGCAGATTATGGGAATAGTAATTCGAGAGAATGAAAGCCTAATTAACGCGTAAGAATCCCTTATAATTTTCCTCTTCCCATGGCCATATTAATATAAATGTTCTTTTTTCTTCACAAATTTCTATTCATATTCTGGGTCCTATCATCTCTCCTTTAGAAGTTTATGGTTGACATCCTTAAAGCACTTCTAACTGTGTATTTGGGATCTCCCTCCTGCAGTTACTTTGAAATTGAACAGATGCTGGAAAGCGAAATAAATAGTGATGTCAGTCTGCAATCACAGCTGAGCAGTCACACATCTGATTCAATGTTTATAAGTTCTTCCGAAAGCAGCTATAACAGCGATCAAGGTAGTGGCAATGAGGACGGTCGAGATGGCAGCTATGTAATATTTGAGGAGAGCTCAGATGAGGTGGATTTTCTTGCCCTGTAGGAGGAAAAGTTTTAAGCAAGAGCTGGTAGTTGCAGTAACCAATGAATTCGGTAATGACACTCCCTCCTCCACTCTCCTAAATGCACACAGACACACTTGGATGTAAGTATAGTAGAATGAGATTTGTCCAAAATGACAGTATTTTAGGATTTGAACTGCCACAAAACTTTTGTGGCACTTATTGCTCCTTGCAAAACAATTTACTTAAGTGGAGGTTTTAAACCATTTTGGAAGGACAGAAGGAGCATGAGACAATGTGGGAGGTATTTCTTTAGGTACCCAAATACAGAAAACACAGATGTCATTTGGGTTTTTTTATAAAAAAATTCATCTTTTGACTAAGCATGCATGTTTAATGTCATCATTTAGTTATCGGTATTAACAGTTGGAATCATAAAAGTCGTGGGACATAATTGTTTCTTTTTTCAGATAGGAAATAGAGAACATTCATTCGTGAATAAAAAGTTATAAAATGATAATCTAATATAATAGTTACAAAAGAAAATACTTTGCCAATGAGACACAAGTGTAGTAACCTATCATTTTTAAAAGGAGCAATTTTGTGTGCATGATAGAGCTAGAATTGTAATAAAATTAGAATCTAGGATGCTTCCCTTTTGTTGTTGATCTTCTGAGAAAATGATGGCACTACGAGGTCTCCGATGTCCACCAAAAATCAGCAAGAAATTAGCACCCCAAAGGCACAAAGTCTTCCCCCTTAAATGGATGACCCATGTATGAAAAGAGGATCAGATCTTGGATGTTGCCAGGTTTAACCATCTGCCAATTGAAAGTACTAAGTAAATGGTGCCAAATCTTGCTAGCTGTTGGACATGTGCTGAAAAGATTGACATAATTGAAAATTTTGAAGTTGTAGAGACTAAATACAACCATCAAACTTCGGAGTTCAACTTTTTTTTTTCTTTTTTTTTTCTACCTAACTAAAGACAGTTTTCCATGTAGGGAGGATGATTTGATGCCTTACATCTGTAGTAGCCATTTGGGTGCCGGCATGAGCGATTTGGTGCTTCGATTTACCGAGGAGTGGAAAATTTTGAACCAGTAGCCTGATTGACTTGACATCCCCATTTATTTACTGAGATACAAACCAAAAGCTAAATCCAGGTAGCCTTCTTCCTGTCAAACCCTTTCTGTAGAAGAGGAAATACAAAAATAAGAGAGAAGAGTGGAGATTTAGTACCCCTTCCCTCATTATTATATCGTAGATGATCGTTATCGTCATCGTCGTTTTATAGAGATCTCTAGTTCCTGATGATGTTAATCTGCCATGAATGTAAATTTTGTTATACCATTGCTTTTGTAGCGCATTAGTTGTATCCGGATCCAACTCAATAGGAGTTGAAAGTTTCTCTTCTAATTGATAGCATTTTGTATGTCATCAGCCATTCAAATTATAGCATTGTCTGATGAATGCAGTGGTTTAAGGGAATAGCAAATCTTGGTAAGGTGGTTGCTGGCTGGTATTTCCTTTTGCTTTGCTCTTTTCCTCAACCTTGTTTGGTACATTCATTTAGTGCAATTATGATTGAAAATAAGGGAAC

mRNA sequence

CCTAATTCCATATTCACTCATACACGTGGCAGTCACAGGCTCGTCCGTATTCGCCCTTCTTCCTTTCTCTGGTGTCCACCCGCTGATGCTATGGACGCTCTCTTTCAAATCCAAACCTCGGCTTCATCATCCATGGCGAAGCGGCCATGTCCGTCGCAAAACCCTAGAACGCCGACCTTCGCGCACATGGACCTTCTCCTCGAGGCCTTTCTCGGCCTCTCCGACTCCTCTTCCGTCGCCATCGACCTCTCATTCGAGCGCCTTCTCGATTCCTCGCCGTCCGATTTGGATCAGTCTCGACTCATCGATCGCGCTCTTGGAATGGGCGCCTTCTTGCTCGAGGCTGGCCGGCGATCCGCGAGGAAACAAGCTACCAAGCATAACTCTGTCGTTTGGGCGCTTCCTCCTGATCTCACCTTCAAAGTTTTTTCCATGCTTGACACTCAGAGCCTTTGCTATGCAACAGCTACTTGTTCAATGTTTCACAAGTATGCGATGGATCCTTCCTGCTATGCCAACATTGACTTAAAAACAGTTTCACCAAGAGTTAATAATGCAGTGGTTTCTACAATGATTCACCGTGCTGGAAACTCCCTTCAATCTCTTAAGCTTGGTATAGTTCCTGGCCCCTCTGCATCTTCTGGATCTTGCCAACCGTTGGTTTTCAGGAACTCTGTAGATGTTACTAGCTTCTCATGGAATGACAAAAGATCCAGACAAGGGAAGGAGTCATCAGTTCTCACAAGATCCTGCTTAAGCCCTTTGGGAGGGGGCAGTAGTTCTCCTGGGAAGCTTTTAAGAACGTTGCATCTTTACAATATTGAAAGAATAGATAGTCAATCACTTCGTGTTGCATTATCTGCTTGCCCATCTCTCCTTGATCTGGAAATCGTGGGCCTTCATGTGGAGTTGAGACAGACATTGATGTCTGTGATTGAAAATTGTCGATCAATAGAGCGTTTGTTCTTTGAATCATCAAAAACAGGCAGGGATGACAGCTTGAAATCACCCACATGTGCTGATCTAGTTCACAACTGTCCTCATTTAGTGTCTTTAGCCCTTAGAGGATTTAAACTCCATGATTGTAAAGTTAGCAAACTTATTAAGGGACTTCGGAAGTTGAAATATGTTGACTTTTCAACTTCTTACTCAATTACTGGAAGCTTTCTTGGAAACCTTGGCAACATTGGTGGTAACTTATTGGAGGTTTTGCTTTTAAGAGACTGCATGCATCTCAAAGAGGTGGAAGTTGCTCGTTTCATGACATCGTTACTTGCTGGAGATTTCAAGTTTCTTCGACATCTAGATATATCCAATAGGGAAGGGTTGGCATCTGAGGGTGATTGGTACGAGAGATGCTACAATTCAAGGATCATTCCAATTGAGCAAGTAATGAAGGAAAGGCCGGATGTATGCTTGCTAGCTGATTTTCCACCAGAAGGAAGTTACTTTGAAATTGAACAGATGCTGGAAAGCGAAATAAATAGTGATGTCAGTCTGCAATCACAGCTGAGCAGTCACACATCTGATTCAATGTTTATAAGTTCTTCCGAAAGCAGCTATAACAGCGATCAAGGTAGTGGCAATGAGGACGGTCGAGATGGCAGCTATGTAATATTTGAGGAGAGCTCAGATGAGGTGGATTTTCTTGCCCTGTAGGAGGAAAAGTTTTAAGCAAGAGCTGGTAGTTGCAGTAACCAATGAATTCGGGAGGATGATTTGATGCCTTACATCTGTAGTAGCCATTTGGGTGCCGGCATGAGCGATTTGGTGCTTCGATTTACCGAGGAGTGGAAAATTTTGAACCAGTAGCCTGATTGACTTGACATCCCCATTTATTTACTGAGATACAAACCAAAAGCTAAATCCAGGTAGCCTTCTTCCTGTCAAACCCTTTCTGTAGAAGAGGAAATACAAAAATAAGAGAGAAGAGTGGAGATTTAGTACCCCTTCCCTCATTATTATATCGTAGATGATCGTTATCGTCATCGTCGTTTTATAGAGATCTCTAGTTCCTGATGATGTTAATCTGCCATGAATGTAAATTTTGTTATACCATTGCTTTTGTAGCGCATTAGTTGTATCCGGATCCAACTCAATAGGAGTTGAAAGTTTCTCTTCTAATTGATAGCATTTTGTATGTCATCAGCCATTCAAATTATAGCATTGTCTGATGAATGCAGTGGTTTAAGGGAATAGCAAATCTTGGTAAGGTGGTTGCTGGCTGGTATTTCCTTTTGCTTTGCTCTTTTCCTCAACCTTGTTTGGTACATTCATTTAGTGCAATTATGATTGAAAATAAGGGAAC

Coding sequence (CDS)

ATGGACGCTCTCTTTCAAATCCAAACCTCGGCTTCATCATCCATGGCGAAGCGGCCATGTCCGTCGCAAAACCCTAGAACGCCGACCTTCGCGCACATGGACCTTCTCCTCGAGGCCTTTCTCGGCCTCTCCGACTCCTCTTCCGTCGCCATCGACCTCTCATTCGAGCGCCTTCTCGATTCCTCGCCGTCCGATTTGGATCAGTCTCGACTCATCGATCGCGCTCTTGGAATGGGCGCCTTCTTGCTCGAGGCTGGCCGGCGATCCGCGAGGAAACAAGCTACCAAGCATAACTCTGTCGTTTGGGCGCTTCCTCCTGATCTCACCTTCAAAGTTTTTTCCATGCTTGACACTCAGAGCCTTTGCTATGCAACAGCTACTTGTTCAATGTTTCACAAGTATGCGATGGATCCTTCCTGCTATGCCAACATTGACTTAAAAACAGTTTCACCAAGAGTTAATAATGCAGTGGTTTCTACAATGATTCACCGTGCTGGAAACTCCCTTCAATCTCTTAAGCTTGGTATAGTTCCTGGCCCCTCTGCATCTTCTGGATCTTGCCAACCGTTGGTTTTCAGGAACTCTGTAGATGTTACTAGCTTCTCATGGAATGACAAAAGATCCAGACAAGGGAAGGAGTCATCAGTTCTCACAAGATCCTGCTTAAGCCCTTTGGGAGGGGGCAGTAGTTCTCCTGGGAAGCTTTTAAGAACGTTGCATCTTTACAATATTGAAAGAATAGATAGTCAATCACTTCGTGTTGCATTATCTGCTTGCCCATCTCTCCTTGATCTGGAAATCGTGGGCCTTCATGTGGAGTTGAGACAGACATTGATGTCTGTGATTGAAAATTGTCGATCAATAGAGCGTTTGTTCTTTGAATCATCAAAAACAGGCAGGGATGACAGCTTGAAATCACCCACATGTGCTGATCTAGTTCACAACTGTCCTCATTTAGTGTCTTTAGCCCTTAGAGGATTTAAACTCCATGATTGTAAAGTTAGCAAACTTATTAAGGGACTTCGGAAGTTGAAATATGTTGACTTTTCAACTTCTTACTCAATTACTGGAAGCTTTCTTGGAAACCTTGGCAACATTGGTGGTAACTTATTGGAGGTTTTGCTTTTAAGAGACTGCATGCATCTCAAAGAGGTGGAAGTTGCTCGTTTCATGACATCGTTACTTGCTGGAGATTTCAAGTTTCTTCGACATCTAGATATATCCAATAGGGAAGGGTTGGCATCTGAGGGTGATTGGTACGAGAGATGCTACAATTCAAGGATCATTCCAATTGAGCAAGTAATGAAGGAAAGGCCGGATGTATGCTTGCTAGCTGATTTTCCACCAGAAGGAAGTTACTTTGAAATTGAACAGATGCTGGAAAGCGAAATAAATAGTGATGTCAGTCTGCAATCACAGCTGAGCAGTCACACATCTGATTCAATGTTTATAAGTTCTTCCGAAAGCAGCTATAACAGCGATCAAGGTAGTGGCAATGAGGACGGTCGAGATGGCAGCTATGTAATATTTGAGGAGAGCTCAGATGAGGTGGATTTTCTTGCCCTGTAG

Protein sequence

MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLDSSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFLGNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWYERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSDSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL

Homology

[Close]

BLAST of Sed0016197.1 vs. NCBI nr
Match: KAG7025523.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 939.9 bits (2428), Expect = 9.5e-270
Identity = 480/522 (91.95%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF+ MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFSQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNSGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSGHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. NCBI nr
Match: XP_022960277.1 (F-box protein At4g02760-like [Cucurbita moschata] >XP_022960278.1 F-box protein At4g02760-like [Cucurbita moschata])

HSP 1 Score: 939.5 bits (2427), Expect = 1.2e-269
Identity = 480/522 (91.95%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF+ MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFSQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNNGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSGHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. NCBI nr
Match: XP_023004386.1 (F-box protein At4g02760-like [Cucurbita maxima] >XP_023004387.1 F-box protein At4g02760-like [Cucurbita maxima] >XP_023004388.1 F-box protein At4g02760-like [Cucurbita maxima])

HSP 1 Score: 939.5 bits (2427), Expect = 1.2e-269
Identity = 480/522 (91.95%), Postives = 493/522 (94.44%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF  MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFTQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNSGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSGHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. NCBI nr
Match: KAG6593116.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 938.3 bits (2424), Expect = 2.8e-269
Identity = 479/522 (91.76%), Postives = 493/522 (94.44%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF  MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFTQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCR+IERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRAIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNSGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSGHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. NCBI nr
Match: XP_023514907.1 (F-box protein SKIP17-like [Cucurbita pepo subsp. pepo] >XP_023514908.1 F-box protein SKIP17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 936.8 bits (2420), Expect = 8.1e-269
Identity = 478/522 (91.57%), Postives = 492/522 (94.25%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF  MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFTQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCR+IERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRAIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKY DFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYADFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNSGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSDHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. ExPASy Swiss-Prot
Match: Q9SY03 (F-box protein At4g02760 OS=Arabidopsis thaliana OX=3702 GN=At4g02760 PE=4 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-78
Identity = 212/538 (39.41%), Postives = 290/538 (53.90%), Query Frame = 0


Query: 17  KRPC-----------PSQNPRTPTF--AHMDLLLEAFLGLSD----SSSVAIDLSFERLL 76
           KRPC           P   P  P F  +++DL + +FL LSD    S  ++I  SF+R+L
Sbjct: 7   KRPCLVPLGTSSIENPCSLPIAPDFNQSNIDLTISSFLSLSDLPLFSLPLSIGCSFDRVL 66

Query: 77  D--------SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFK 136
           D        +S  + DQ R +DR L + + L ++ +R  RK+AT  NS  W L P+LT K
Sbjct: 67  DNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLLPELTIK 126

Query: 137 VFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQS 196
           VFSMLDT+SL  A+A C+MF+K AMD  CY++IDL T +  V+N VV  MIHRAG  L+S
Sbjct: 127 VFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRAGKELRS 186

Query: 197 LKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSS 256
           LKLG +      S S +P                        +S+LTRSCL+PL      
Sbjct: 187 LKLGSI------SSSAEP-----------------------TTSLLTRSCLTPLTFNHGF 246

Query: 257 PGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERL 316
            G  LR+LHLY++  ID  SL   LSAC +L DL+IVGL   L Q L  +  NCR IE L
Sbjct: 247 TGGHLRSLHLYHLRMIDCGSLSPVLSACLNLTDLKIVGLDNPLEQ-LGLLTRNCRLIEHL 306

Query: 317 FFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFST 376
           F E    G    +   +  +   NCP+L S++L GF L+D  + KLIKG R+LK+++ S+
Sbjct: 307 FIEI--YGAAGLITDSSLLEFAANCPNLSSISLLGFLLNDAILQKLIKGFRRLKHINLSS 366

Query: 377 SYSITGSFLGNLGNIG-GNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNR 436
           S  I+G F   L   G  + LE L+LRDC  LKE EV  F+ SLLAGDFK++R +D+SN 
Sbjct: 367 SPEISGCFFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLIDVSNV 426

Query: 437 EGLASEGDWYERCYNSRIIPIEQVMKERPDVCLLADFPPEGSY----FEIEQM------- 496
           +GL  +G    R +  R  PIE++ K+R +V  +A F  + S     F +E++       
Sbjct: 427 DGLVCDGG--NRTFEPR-FPIEELKKQRSNVTFVAIFESQSSLSSSRFPLEELNKERPGL 486

Query: 497 -LESEINSDVSLQSQLSSHTSDSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDE 517
              +E  S    +S + S +  S   SSS S  +S   SG      G+    EE  DE
Sbjct: 487 TFVAEFRSPSPSESDVRSPSPSSSSDSSSSSDSSSSSSSGESSDESGT----EEEEDE 505

[Close]

BLAST of Sed0016197.1 vs. ExPASy Swiss-Prot
Match: Q0WRC9 (F-box protein SKIP17 OS=Arabidopsis thaliana OX=3702 GN=SKIP17 PE=1 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.6e-76
Identity = 194/481 (40.33%), Postives = 267/481 (55.51%), Query Frame = 0


Query: 31  AHMDLLLEAFLGLSDSSSVAIDLSFERLLD-----SSPSDLDQSRLIDRALGMGAFLLEA 90
           +H DL++ +FL   DSS ++I  SF+R+LD     +S  +  Q RL+DR L + + LL++
Sbjct: 20  SHTDLIISSFLSFPDSSPISISNSFDRVLDRALASASADESVQDRLVDRTLELASLLLDS 79

Query: 91  GRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANID 150
            RR  RK+A+ HNS  W+LPP+LT KVFSMLDT+S+  A   C+MF+K AMD  CY++ID
Sbjct: 80  TRRCFRKRASVHNSNSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFNKCAMDRLCYSHID 139

Query: 151 LKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWND 210
           L T +   +  VVSTMI+RAG  L+SLKLG V   +A S S  PL               
Sbjct: 140 LTTSARYADKGVVSTMINRAGKELRSLKLGRVV-RTAGSDSAAPL--------------- 199

Query: 211 KRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSLLDL 270
                      L+ SCLSPL       G  LR+L LYN+  I  +SL  ALS CP++ DL
Sbjct: 200 -----------LSGSCLSPLAYNHGFLGSRLRSLRLYNLRPIKYRSLCDALSVCPNITDL 259

Query: 271 EIVGLHVELRQTLMSVIENCRSIERLFFESSKTGRD-DSLKSPTCADLVHNCPHLVSLAL 330
            IVGL+    +   S+ + CR IE LF E+    R  +S    +  + V NCP+L SL L
Sbjct: 260 RIVGLYNLTEELFNSLTKKCRLIEHLFLETYGYPRTLESKAGSSLVEFVTNCPNLTSLTL 319

Query: 331 RGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFLGNLG-NIGGNLLEVLLLRDCMHLK 390
             F L D     L +  RKLKY++ S S +I G FL  LG +   NLL+ L+LR C  L+
Sbjct: 320 IRFGLTDDWARNLAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLLKTLILRSCPKLQ 379

Query: 391 EVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWYERCYNSRIIPIEQVMKERPDVCL 450
           E EV  F  SLL G+FK +R +D+S+  GLAS  D  +RC N    P+E++ +ER DV  
Sbjct: 380 EKEVLEFCNSLLTGNFKSIRQIDVSSNSGLAS-SDRGKRC-NKPNFPLERLKEERSDVTF 439

Query: 451 LADFPPEGS----------YFEIEQMLESEINSDVSLQSQLSSHTSDSMFISSSESSYNS 495
           +ADFP   S             + +M+E+E + +V  +      T D   +S  + S N 
Sbjct: 440 VADFPSTSSGKRYGVCDEEELRLIEMMEAE-DDEVDEEDDSDDDTDD---VSDEDESEND 467

[Close]

BLAST of Sed0016197.1 vs. ExPASy Swiss-Prot
Match: Q2V3L6 (F-box protein At4g02733 OS=Arabidopsis thaliana OX=3702 GN=At4g02733 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.4e-42
Identity = 108/278 (38.85%), Postives = 164/278 (58.99%), Query Frame = 0


Query: 32  HMDLLLEAFLGLSDSSSVAIDLSFERLLDSSPSDLD---QSRLIDRALGMGAFLLEAGRR 91
           H+D ++ + +   DS S++I  SF+R+LD   S  D   Q +L+DR L   + LL++ +R
Sbjct: 22  HLDSIISSLVTFPDSPSLSISSSFDRVLDHLLSSGDVSVQDQLVDRTLERFSLLLQSTKR 81

Query: 92  SARKQATKHNSVVWALPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKT 151
            ++K+AT HNS+ W LP +LT KVFSM+DT+SL  A+A C+MF+  AMDP CY +IDL  
Sbjct: 82  CSQKRATLHNSISWFLPSELTVKVFSMVDTKSLMQASACCTMFNNCAMDPLCYFHIDLTK 141

Query: 152 VSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGPSA-SSGSCQPLVFRNSVDVTSFSWNDKR 211
               V++ V+ T+++R+G  L+SLKLG V  P      SC P        +  +  N +R
Sbjct: 142 AFKHVDDRVLRTLLNRSGKQLRSLKLGRVDAPGCLFRSSCLP-------PLILYGNNARR 201

Query: 212 S-RQGKE----SSVLTRSCLSPLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSL 271
           + + G++     S+ TRSC  PL       G LL +LH+Y++  ++  S    LSAC +L
Sbjct: 202 ALKLGRDPPGLGSLFTRSCFDPL----KLTGNLLTSLHIYSLGFMNMNSFLDPLSACSNL 261

Query: 272 LDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 301
            DL+IVG++V L   L  +  NC  IE LF ++   G+
Sbjct: 262 TDLKIVGVNVLLEPILELLARNCCLIEHLFLDNCSQGK 288

[Close]

BLAST of Sed0016197.1 vs. ExPASy Swiss-Prot
Match: Q9CZV8 (F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 5.5e-10
Identity = 68/287 (23.69%), Postives = 116/287 (40.42%), Query Frame = 0


Query: 104 LPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIH 163
           LP +L  ++FS LD  +LC        ++  A+D S +  IDL      +   VV  +  
Sbjct: 28  LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87

Query: 164 RAGNSLQSLKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLS 223
           R G  L+ L L    G      +      +N  ++   S N          + L++ C  
Sbjct: 88  RCGGFLRKLSL---RGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFC-- 147

Query: 224 PLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIE 283
                       LR L L +   I + SL+     CP L  L I       +  + +++ 
Sbjct: 148 ----------SKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVR 207

Query: 284 NCRSIERLFFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRG-FKLHDCKVSKLIKGLR 343
            C  ++ LF +      D++LK      +  +CP LV+L L+   ++ D  +  + +G  
Sbjct: 208 GCGGLKALFLKGCTQLEDEALKY-----IGAHCPELVTLNLQTCLQITDEGLITICRGCH 267

Query: 344 KLKYVDFSTSYSITGSFLGNLGNIGGNLLEVLLLRDCMHLKEVEVAR 390
           KL+ +  S   +IT + L  LG            ++C  L+ +EVAR
Sbjct: 268 KLQSLCASGCSNITDAILNALG------------QNCPRLRILEVAR 282

[Close]

BLAST of Sed0016197.1 vs. ExPASy Swiss-Prot
Match: Q58DG6 (F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-09
Identity = 67/287 (23.34%), Postives = 116/287 (40.42%), Query Frame = 0


Query: 104 LPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIH 163
           LP +L  ++FS LD  +LC        ++  A+D S +  IDL      +   VV  +  
Sbjct: 28  LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87

Query: 164 RAGNSLQSLKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLS 223
           R G  L+ L L    G      +      +N  ++   + N          + L++ C  
Sbjct: 88  RCGGFLRKLSL---RGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFC-- 147

Query: 224 PLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIE 283
                       LR L L +   I + SL+     CP L  L I       +  + +++ 
Sbjct: 148 ----------SKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVR 207

Query: 284 NCRSIERLFFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRG-FKLHDCKVSKLIKGLR 343
            C  ++ LF +      D++LK      +  +CP LV+L L+   ++ D  +  + +G  
Sbjct: 208 GCGGLKALFLKGCTQLEDEALKY-----IGAHCPELVTLNLQTCLQITDEGLITICRGCH 267

Query: 344 KLKYVDFSTSYSITGSFLGNLGNIGGNLLEVLLLRDCMHLKEVEVAR 390
           KL+ +  S   +IT + L  LG            ++C  L+ +EVAR
Sbjct: 268 KLQSLCASGCSNITDAILNALG------------QNCPRLRILEVAR 282

[Close]

BLAST of Sed0016197.1 vs. ExPASy TrEMBL
Match: A0A6J1KZC4 (F-box protein At4g02760-like OS=Cucurbita maxima OX=3661 GN=LOC111497723 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 6.0e-270
Identity = 480/522 (91.95%), Postives = 493/522 (94.44%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF  MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFTQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNSGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSGHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. ExPASy TrEMBL
Match: A0A6J1H6Z2 (F-box protein At4g02760-like OS=Cucurbita moschata OX=3662 GN=LOC111461067 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 6.0e-270
Identity = 480/522 (91.95%), Postives = 494/522 (94.64%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTS  SSMAKRPCPSQNPR PTF+ MDLLLEAFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALFQVQTSPPSSMAKRPCPSQNPRIPTFSQMDLLLEAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLID AL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SLPSDLDQTRLIDHALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYA ATCSMFHK A DPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYAIATCSMFHKCAKDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +A  GSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH
Sbjct: 181 TAPLGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+DSQSLR AL ACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR
Sbjct: 241 LYNIERMDSQSLRAALCACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTCADLVH+CP LVSLALRGFKLHD KV KL+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCADLVHSCPRLVSLALRGFKLHDDKVGKLVKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGNIGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420
           GNLGN GGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY
Sbjct: 361 GNLGNNGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWY 420

Query: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTSD 480
           ERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLS HTSD
Sbjct: 421 ERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSGHTSD 480

Query: 481 SMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           SMF+SSSE SYNSDQGSGNEDGR+ SYVI+EESSDEVDFL L
Sbjct: 481 SMFMSSSEGSYNSDQGSGNEDGREASYVIYEESSDEVDFLIL 522

[Close]

BLAST of Sed0016197.1 vs. ExPASy TrEMBL
Match: A0A6J1D800 (F-box protein SKIP17-like OS=Momordica charantia OX=3673 GN=LOC111018465 PE=4 SV=1)

HSP 1 Score: 923.3 bits (2385), Expect = 4.5e-265
Identity = 480/525 (91.43%), Postives = 494/525 (94.10%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDAL QIQTSA SSMAKRPCPSQNPR PTF  MDLLL+AFLGLSDSSS+ IDLSFERLLD
Sbjct: 1   MDALLQIQTSAPSSMAKRPCPSQNPRIPTFTQMDLLLDAFLGLSDSSSICIDLSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQ+RLIDRAL MG FLLEAG+RSARK+ATKHNSVVWALPPDLT KVFSMLDTQS
Sbjct: 61  SMPSDLDQTRLIDRALKMGTFLLEAGKRSARKRATKHNSVVWALPPDLTIKVFSMLDTQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYATATCSMFHK AMDPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYATATCSMFHKCAMDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVF--RNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRT 240
           +A  GSCQPLV+  RNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPG LLRT
Sbjct: 181 TAPLGSCQPLVYNIRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGMLLRT 240

Query: 241 LHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKT 300
           LHLYNIER+D+ SL VALSACPSLLDLEIVGLHVELRQTLMSVI++C+ IERLFFESSKT
Sbjct: 241 LHLYNIERMDNTSLCVALSACPSLLDLEIVGLHVELRQTLMSVIDSCQLIERLFFESSKT 300

Query: 301 GRDDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGS 360
           GRDDSLKSPTC DLV NCP LVSLALRGFKLHD KV  LIKGLRKLKYVDFSTSYSITGS
Sbjct: 301 GRDDSLKSPTCVDLVQNCPRLVSLALRGFKLHDYKVRILIKGLRKLKYVDFSTSYSITGS 360

Query: 361 FLGNLGN-IGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEG 420
           FL NLGN IGGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEG
Sbjct: 361 FLRNLGNSIGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEG 420

Query: 421 DWYERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSH 480
           DWYERCYNSRIIPIEQVMKERPDVCLLADFP EGSYFEIEQMLESEINSDVSL SQLSSH
Sbjct: 421 DWYERCYNSRIIPIEQVMKERPDVCLLADFPSEGSYFEIEQMLESEINSDVSLPSQLSSH 480

Query: 481 TSDSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           TSDSMFISSSESSYNSDQGSGNEDGRD S+VIFEESSDEVDFLAL
Sbjct: 481 TSDSMFISSSESSYNSDQGSGNEDGRDSSFVIFEESSDEVDFLAL 525

[Close]

BLAST of Sed0016197.1 vs. ExPASy TrEMBL
Match: A0A6J1GPQ3 (F-box protein SKIP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456406 PE=4 SV=1)

HSP 1 Score: 892.5 bits (2305), Expect = 8.5e-256
Identity = 464/523 (88.72%), Postives = 484/523 (92.54%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTSA S+MAKRPC SQNPR PTF  MDLLL+AFLGLSDS S+ ID SFERLLD
Sbjct: 1   MDALFQVQTSAPSTMAKRPCTSQNPRIPTFTQMDLLLDAFLGLSDSPSICIDFSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQSRLIDRAL MG FLLEA +RSARK+ATKHNSVVWALPPDLT KVFSMLD QS
Sbjct: 61  SLPSDLDQSRLIDRALKMGNFLLEASKRSARKRATKHNSVVWALPPDLTIKVFSMLDAQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYATATCSMFHK AMDPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYATATCSMFHKCAMDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +AS GSCQPLV+    +VTSFSWNDKRSRQGKESSVLTRSCLSPL GG+S+PG LLRTLH
Sbjct: 181 TASLGSCQPLVY----NVTSFSWNDKRSRQGKESSVLTRSCLSPL-GGASTPGMLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+D+ SLR ALSACPSLLDLEIVGLHVELRQTL SVIENC+ IERLFFESSKTGR
Sbjct: 241 LYNIERMDNPSLRAALSACPSLLDLEIVGLHVELRQTLTSVIENCQFIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTC DLV  CP LVSLALRGFKLHD KV  L+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCVDLVQKCPRLVSLALRGFKLHDYKVRILLKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGN-IGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDW 420
            NLGN IGGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLD+SNREGLASEGDW
Sbjct: 361 RNLGNSIGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDMSNREGLASEGDW 420

Query: 421 YERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTS 480
           YERCYNSRIIPIEQVMKERPD+CLLADFP EGSYFEIEQMLESEINSD+SLQSQLS+ TS
Sbjct: 421 YERCYNSRIIPIEQVMKERPDLCLLADFPSEGSYFEIEQMLESEINSDISLQSQLSNQTS 480

Query: 481 DSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           DSMFISSSESSYNSDQGSGNEDGRD SYVIFEESSDEVDFLAL
Sbjct: 481 DSMFISSSESSYNSDQGSGNEDGRDASYVIFEESSDEVDFLAL 518

[Close]

BLAST of Sed0016197.1 vs. ExPASy TrEMBL
Match: A0A6J1JZF4 (F-box protein SKIP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488820 PE=4 SV=1)

HSP 1 Score: 891.0 bits (2301), Expect = 2.5e-255
Identity = 463/523 (88.53%), Postives = 483/523 (92.35%), Query Frame = 0


Query: 1   MDALFQIQTSASSSMAKRPCPSQNPRTPTFAHMDLLLEAFLGLSDSSSVAIDLSFERLLD 60
           MDALFQ+QTSA S+MAKRPCPSQNPR PTF  MDLLL+AFLGLSDS S+ ID SFERLLD
Sbjct: 1   MDALFQVQTSAPSTMAKRPCPSQNPRVPTFTQMDLLLDAFLGLSDSPSICIDFSFERLLD 60

Query: 61  SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQS 120
           S PSDLDQSRLIDRAL MG FLLEA +RSARK+ATKHNSVVWALPPDLT KVFSMLD QS
Sbjct: 61  SLPSDLDQSRLIDRALKMGNFLLEASKRSARKRATKHNSVVWALPPDLTIKVFSMLDAQS 120

Query: 121 LCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180
           LCYATATCSMFHK AMDPSCYANIDL TVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP
Sbjct: 121 LCYATATCSMFHKCAMDPSCYANIDLTTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGP 180

Query: 181 SASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLH 240
           +AS GSCQPLV+    +VTSFSWNDKRSRQGKESSVLTRSCLSPL GG+S+PG LLRTLH
Sbjct: 181 TASLGSCQPLVY----NVTSFSWNDKRSRQGKESSVLTRSCLSPL-GGASTPGMLLRTLH 240

Query: 241 LYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 300
           LYNIER+D+ SLR A SACPSLLDLEIVGLHVELRQTL SVIENC+ IERLFFESSKTGR
Sbjct: 241 LYNIERMDNPSLRGAFSACPSLLDLEIVGLHVELRQTLTSVIENCQFIERLFFESSKTGR 300

Query: 301 DDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFL 360
           DDSLKSPTC DLV  CP +VSLALRGFKLHD KV  L+KGLRKLKYVDFSTSYSITGSFL
Sbjct: 301 DDSLKSPTCVDLVQKCPRIVSLALRGFKLHDYKVRILLKGLRKLKYVDFSTSYSITGSFL 360

Query: 361 GNLGN-IGGNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDW 420
            NLGN IGGNLLEVL+LRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDW
Sbjct: 361 RNLGNSIGGNLLEVLILRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDW 420

Query: 421 YERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINSDVSLQSQLSSHTS 480
           YERCYNSRIIPIEQV+KERPDVCLLADFP EGSYFEIEQMLESEINSD+SL SQLS+ TS
Sbjct: 421 YERCYNSRIIPIEQVIKERPDVCLLADFPSEGSYFEIEQMLESEINSDISLPSQLSNQTS 480

Query: 481 DSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDEVDFLAL 523
           DSMFISSSESSYNSDQGSGNEDGRD SYVIFEESSDEVDFLAL
Sbjct: 481 DSMFISSSESSYNSDQGSGNEDGRDASYVIFEESSDEVDFLAL 518

[Close]

BLAST of Sed0016197.1 vs. TAIR 10
Match: AT4G02760.1 (RNI-like superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 1.5e-79
Identity = 212/538 (39.41%), Postives = 290/538 (53.90%), Query Frame = 0


Query: 17  KRPC-----------PSQNPRTPTF--AHMDLLLEAFLGLSD----SSSVAIDLSFERLL 76
           KRPC           P   P  P F  +++DL + +FL LSD    S  ++I  SF+R+L
Sbjct: 7   KRPCLVPLGTSSIENPCSLPIAPDFNQSNIDLTISSFLSLSDLPLFSLPLSIGCSFDRVL 66

Query: 77  D--------SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFK 136
           D        +S  + DQ R +DR L + + L ++ +R  RK+AT  NS  W L P+LT K
Sbjct: 67  DNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLLPELTIK 126

Query: 137 VFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQS 196
           VFSMLDT+SL  A+A C+MF+K AMD  CY++IDL T +  V+N VV  MIHRAG  L+S
Sbjct: 127 VFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRAGKELRS 186

Query: 197 LKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSS 256
           LKLG +      S S +P                        +S+LTRSCL+PL      
Sbjct: 187 LKLGSI------SSSAEP-----------------------TTSLLTRSCLTPLTFNHGF 246

Query: 257 PGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERL 316
            G  LR+LHLY++  ID  SL   LSAC +L DL+IVGL   L Q L  +  NCR IE L
Sbjct: 247 TGGHLRSLHLYHLRMIDCGSLSPVLSACLNLTDLKIVGLDNPLEQ-LGLLTRNCRLIEHL 306

Query: 317 FFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFST 376
           F E    G    +   +  +   NCP+L S++L GF L+D  + KLIKG R+LK+++ S+
Sbjct: 307 FIEI--YGAAGLITDSSLLEFAANCPNLSSISLLGFLLNDAILQKLIKGFRRLKHINLSS 366

Query: 377 SYSITGSFLGNLGNIG-GNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNR 436
           S  I+G F   L   G  + LE L+LRDC  LKE EV  F+ SLLAGDFK++R +D+SN 
Sbjct: 367 SPEISGCFFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLIDVSNV 426

Query: 437 EGLASEGDWYERCYNSRIIPIEQVMKERPDVCLLADFPPEGSY----FEIEQM------- 496
           +GL  +G    R +  R  PIE++ K+R +V  +A F  + S     F +E++       
Sbjct: 427 DGLVCDGG--NRTFEPR-FPIEELKKQRSNVTFVAIFESQSSLSSSRFPLEELNKERPGL 486

Query: 497 -LESEINSDVSLQSQLSSHTSDSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDE 517
              +E  S    +S + S +  S   SSS S  +S   SG      G+    EE  DE
Sbjct: 487 TFVAEFRSPSPSESDVRSPSPSSSSDSSSSSDSSSSSSSGESSDESGT----EEEEDE 505

[Close]

BLAST of Sed0016197.1 vs. TAIR 10
Match: AT4G02760.2 (RNI-like superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 1.5e-79
Identity = 212/538 (39.41%), Postives = 290/538 (53.90%), Query Frame = 0


Query: 17  KRPC-----------PSQNPRTPTF--AHMDLLLEAFLGLSD----SSSVAIDLSFERLL 76
           KRPC           P   P  P F  +++DL + +FL LSD    S  ++I  SF+R+L
Sbjct: 7   KRPCLVPLGTSSIENPCSLPIAPDFNQSNIDLTISSFLSLSDLPLFSLPLSIGCSFDRVL 66

Query: 77  D--------SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFK 136
           D        +S  + DQ R +DR L + + L ++ +R  RK+AT  NS  W L P+LT K
Sbjct: 67  DNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLLPELTIK 126

Query: 137 VFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQS 196
           VFSMLDT+SL  A+A C+MF+K AMD  CY++IDL T +  V+N VV  MIHRAG  L+S
Sbjct: 127 VFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRAGKELRS 186

Query: 197 LKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSS 256
           LKLG +      S S +P                        +S+LTRSCL+PL      
Sbjct: 187 LKLGSI------SSSAEP-----------------------TTSLLTRSCLTPLTFNHGF 246

Query: 257 PGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELRQTLMSVIENCRSIERL 316
            G  LR+LHLY++  ID  SL   LSAC +L DL+IVGL   L Q L  +  NCR IE L
Sbjct: 247 TGGHLRSLHLYHLRMIDCGSLSPVLSACLNLTDLKIVGLDNPLEQ-LGLLTRNCRLIEHL 306

Query: 317 FFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYVDFST 376
           F E    G    +   +  +   NCP+L S++L GF L+D  + KLIKG R+LK+++ S+
Sbjct: 307 FIEI--YGAAGLITDSSLLEFAANCPNLSSISLLGFLLNDAILQKLIKGFRRLKHINLSS 366

Query: 377 SYSITGSFLGNLGNIG-GNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLDISNR 436
           S  I+G F   L   G  + LE L+LRDC  LKE EV  F+ SLLAGDFK++R +D+SN 
Sbjct: 367 SPEISGCFFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLIDVSNV 426

Query: 437 EGLASEGDWYERCYNSRIIPIEQVMKERPDVCLLADFPPEGSY----FEIEQM------- 496
           +GL  +G    R +  R  PIE++ K+R +V  +A F  + S     F +E++       
Sbjct: 427 DGLVCDGG--NRTFEPR-FPIEELKKQRSNVTFVAIFESQSSLSSSRFPLEELNKERPGL 486

Query: 497 -LESEINSDVSLQSQLSSHTSDSMFISSSESSYNSDQGSGNEDGRDGSYVIFEESSDE 517
              +E  S    +S + S +  S   SSS S  +S   SG      G+    EE  DE
Sbjct: 487 TFVAEFRSPSPSESDVRSPSPSSSSDSSSSSDSSSSSSSGESSDESGT----EEEEDE 505

[Close]

BLAST of Sed0016197.1 vs. TAIR 10
Match: AT4G02740.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.8e-77
Identity = 194/481 (40.33%), Postives = 267/481 (55.51%), Query Frame = 0


Query: 31  AHMDLLLEAFLGLSDSSSVAIDLSFERLLD-----SSPSDLDQSRLIDRALGMGAFLLEA 90
           +H DL++ +FL   DSS ++I  SF+R+LD     +S  +  Q RL+DR L + + LL++
Sbjct: 20  SHTDLIISSFLSFPDSSPISISNSFDRVLDRALASASADESVQDRLVDRTLELASLLLDS 79

Query: 91  GRRSARKQATKHNSVVWALPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANID 150
            RR  RK+A+ HNS  W+LPP+LT KVFSMLDT+S+  A   C+MF+K AMD  CY++ID
Sbjct: 80  TRRCFRKRASVHNSNSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFNKCAMDRLCYSHID 139

Query: 151 LKTVSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWND 210
           L T +   +  VVSTMI+RAG  L+SLKLG V   +A S S  PL               
Sbjct: 140 LTTSARYADKGVVSTMINRAGKELRSLKLGRVV-RTAGSDSAAPL--------------- 199

Query: 211 KRSRQGKESSVLTRSCLSPLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSLLDL 270
                      L+ SCLSPL       G  LR+L LYN+  I  +SL  ALS CP++ DL
Sbjct: 200 -----------LSGSCLSPLAYNHGFLGSRLRSLRLYNLRPIKYRSLCDALSVCPNITDL 259

Query: 271 EIVGLHVELRQTLMSVIENCRSIERLFFESSKTGRD-DSLKSPTCADLVHNCPHLVSLAL 330
            IVGL+    +   S+ + CR IE LF E+    R  +S    +  + V NCP+L SL L
Sbjct: 260 RIVGLYNLTEELFNSLTKKCRLIEHLFLETYGYPRTLESKAGSSLVEFVTNCPNLTSLTL 319

Query: 331 RGFKLHDCKVSKLIKGLRKLKYVDFSTSYSITGSFLGNLG-NIGGNLLEVLLLRDCMHLK 390
             F L D     L +  RKLKY++ S S +I G FL  LG +   NLL+ L+LR C  L+
Sbjct: 320 IRFGLTDDWARNLAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLLKTLILRSCPKLQ 379

Query: 391 EVEVARFMTSLLAGDFKFLRHLDISNREGLASEGDWYERCYNSRIIPIEQVMKERPDVCL 450
           E EV  F  SLL G+FK +R +D+S+  GLAS  D  +RC N    P+E++ +ER DV  
Sbjct: 380 EKEVLEFCNSLLTGNFKSIRQIDVSSNSGLAS-SDRGKRC-NKPNFPLERLKEERSDVTF 439

Query: 451 LADFPPEGS----------YFEIEQMLESEINSDVSLQSQLSSHTSDSMFISSSESSYNS 495
           +ADFP   S             + +M+E+E + +V  +      T D   +S  + S N 
Sbjct: 440 VADFPSTSSGKRYGVCDEEELRLIEMMEAE-DDEVDEEDDSDDDTDD---VSDEDESEND 467

[Close]

BLAST of Sed0016197.1 vs. TAIR 10
Match: AT4G02760.3 (RNI-like superfamily protein )

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-76
Identity = 203/515 (39.42%), Postives = 278/515 (53.98%), Query Frame = 0


Query: 17  KRPC-----------PSQNPRTPTF--AHMDLLLEAFLGLSD----SSSVAIDLSFERLL 76
           KRPC           P   P  P F  +++DL + +FL LSD    S  ++I  SF+R+L
Sbjct: 7   KRPCLVPLGTSSIENPCSLPIAPDFNQSNIDLTISSFLSLSDLPLFSLPLSIGCSFDRVL 66

Query: 77  D--------SSPSDLDQSRLIDRALGMGAFLLEAGRRSARKQATKHNSVVWALPPDLTFK 136
           D        +S  + DQ R +DR L + + L ++ +R  RK+AT  NS  W L P+LT K
Sbjct: 67  DNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLLPELTIK 126

Query: 137 VFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKTVSPRVNNAVVSTMIHRAGNSLQS 196
           VFSMLDT+SL  A+A C+MF+K AMD  CY++IDL T +  V+N VV  MIHRAG  L+S
Sbjct: 127 VFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRAGKELRS 186

Query: 197 LKLGIVPGPSASSGSCQPLVFRNSVDVTSFSWNDKRSRQGKESSVLTRSCLSPLGGGSSS 256
           LKLG +      S S +P                        +S+LTRSCL+PL      
Sbjct: 187 LKLGSI------SSSAEP-----------------------TTSLLTRSCLTPLTFNHGF 246

Query: 257 PGKLLRTLHLYNIERIDSQSLRVALSACPSLLDLEIVGLHVELR----QTLMSVIENCRS 316
            G  LR+LHLY++  ID  SL   LSAC +L DL+IVGL    R    + L  +  NCR 
Sbjct: 247 TGGHLRSLHLYHLRMIDCGSLSPVLSACLNLTDLKIVGLISGSRDNPLEQLGLLTRNCRL 306

Query: 317 IERLFFESSKTGRDDSLKSPTCADLVHNCPHLVSLALRGFKLHDCKVSKLIKGLRKLKYV 376
           IE LF E    G    +   +  +   NCP+L S++L GF L+D  + KLIKG R+LK++
Sbjct: 307 IEHLFIEI--YGAAGLITDSSLLEFAANCPNLSSISLLGFLLNDAILQKLIKGFRRLKHI 366

Query: 377 DFSTSYSITGSFLGNLGNIG-GNLLEVLLLRDCMHLKEVEVARFMTSLLAGDFKFLRHLD 436
           + S+S  I+G F   L   G  + LE L+LRDC  LKE EV  F+ SLLAGDFK++R +D
Sbjct: 367 NLSSSPEISGCFFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLID 426

Query: 437 ISNREGLASEGDWYERCYNSRIIPIEQVMKERPDVCLLADFPPEGSYFEIEQMLESEINS 496
           +SN +GL  +G    R +  R  PIE++ K+R +V  +A F                   
Sbjct: 427 VSNVDGLVCDGG--NRTFEPR-FPIEELKKQRSNVTFVAIF------------------- 465

Query: 497 DVSLQSQLSSHTSDSMFISSSESSYNSDQGSGNED 502
               QS LSS +S  ++ S   SS+ S+  S  E+
Sbjct: 487 --ESQSSLSSSSSGEVY-SDGTSSWTSNYNSAEEE 465

[Close]

BLAST of Sed0016197.1 vs. TAIR 10
Match: AT4G02733.1 (F-box family protein )

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-43
Identity = 108/278 (38.85%), Postives = 164/278 (58.99%), Query Frame = 0


Query: 32  HMDLLLEAFLGLSDSSSVAIDLSFERLLDSSPSDLD---QSRLIDRALGMGAFLLEAGRR 91
           H+D ++ + +   DS S++I  SF+R+LD   S  D   Q +L+DR L   + LL++ +R
Sbjct: 22  HLDSIISSLVTFPDSPSLSISSSFDRVLDHLLSSGDVSVQDQLVDRTLERFSLLLQSTKR 81

Query: 92  SARKQATKHNSVVWALPPDLTFKVFSMLDTQSLCYATATCSMFHKYAMDPSCYANIDLKT 151
            ++K+AT HNS+ W LP +LT KVFSM+DT+SL  A+A C+MF+  AMDP CY +IDL  
Sbjct: 82  CSQKRATLHNSISWFLPSELTVKVFSMVDTKSLMQASACCTMFNNCAMDPLCYFHIDLTK 141

Query: 152 VSPRVNNAVVSTMIHRAGNSLQSLKLGIVPGPSA-SSGSCQPLVFRNSVDVTSFSWNDKR 211
               V++ V+ T+++R+G  L+SLKLG V  P      SC P        +  +  N +R
Sbjct: 142 AFKHVDDRVLRTLLNRSGKQLRSLKLGRVDAPGCLFRSSCLP-------PLILYGNNARR 201

Query: 212 S-RQGKE----SSVLTRSCLSPLGGGSSSPGKLLRTLHLYNIERIDSQSLRVALSACPSL 271
           + + G++     S+ TRSC  PL       G LL +LH+Y++  ++  S    LSAC +L
Sbjct: 202 ALKLGRDPPGLGSLFTRSCFDPL----KLTGNLLTSLHIYSLGFMNMNSFLDPLSACSNL 261

Query: 272 LDLEIVGLHVELRQTLMSVIENCRSIERLFFESSKTGR 301
            DL+IVG++V L   L  +  NC  IE LF ++   G+
Sbjct: 262 TDLKIVGVNVLLEPILELLARNCCLIEHLFLDNCSQGK 288

The following BLAST results are available for this feature:

BLAST of Sed0016197.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025523.1	9.5e-270	91.95	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960277.1	1.2e-269	91.95	F-box protein At4g02760-like [Cucurbita moschata] >XP_022960278.1 F-box protein ...	[more]
XP_023004386.1	1.2e-269	91.95	F-box protein At4g02760-like [Cucurbita maxima] >XP_023004387.1 F-box protein At...	[more]
KAG6593116.1	2.8e-269	91.76	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023514907.1	8.1e-269	91.57	F-box protein SKIP17-like [Cucurbita pepo subsp. pepo] >XP_023514908.1 F-box pro...	[more]

BLAST of Sed0016197.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY03	2.1e-78	39.41	F-box protein At4g02760 OS=Arabidopsis thaliana OX=3702 GN=At4g02760 PE=4 SV=2	[more]
Q0WRC9	2.6e-76	40.33	F-box protein SKIP17 OS=Arabidopsis thaliana OX=3702 GN=SKIP17 PE=1 SV=1	[more]
Q2V3L6	2.4e-42	38.85	F-box protein At4g02733 OS=Arabidopsis thaliana OX=3702 GN=At4g02733 PE=2 SV=1	[more]
Q9CZV8	5.5e-10	23.69	F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3	[more]
Q58DG6	1.2e-09	23.34	F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2	[more]

BLAST of Sed0016197.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZC4	6.0e-270	91.95	F-box protein At4g02760-like OS=Cucurbita maxima OX=3661 GN=LOC111497723 PE=4 SV...	[more]
A0A6J1H6Z2	6.0e-270	91.95	F-box protein At4g02760-like OS=Cucurbita moschata OX=3662 GN=LOC111461067 PE=4 ...	[more]
A0A6J1D800	4.5e-265	91.43	F-box protein SKIP17-like OS=Momordica charantia OX=3673 GN=LOC111018465 PE=4 SV...	[more]
A0A6J1GPQ3	8.5e-256	88.72	F-box protein SKIP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114564...	[more]
A0A6J1JZF4	2.5e-255	88.53	F-box protein SKIP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488820...	[more]

BLAST of Sed0016197.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02760.1	1.5e-79	39.41	RNI-like superfamily protein	[more]
AT4G02760.2	1.5e-79	39.41	RNI-like superfamily protein	[more]
AT4G02740.1	1.8e-77	40.33	F-box/RNI-like superfamily protein	[more]
AT4G02760.3	2.0e-76	39.42	RNI-like superfamily protein	[more]
AT4G02733.1	1.7e-43	38.85	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 143..417 e-value: 6.2E-12 score: 46.6
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 103..146 e-value: 6.1E-6 score: 26.0
None	No IPR available	GENE3D	1.20.1280.50		coord: 98..142 e-value: 1.3E-6 score: 30.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..506
None	No IPR available	PANTHER	PTHR16134:SF73	F-BOX SKIP17-LIKE PROTEIN	coord: 30..466
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 30..466
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 231..412
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 90..148

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0016197	Sed0016197	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016197.1-five_prime_utr	Sed0016197.1-five_prime_utr-LG07:3171100..3171189	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3171100..3171522	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3172496..3172671	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3174001..3174189	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3174265..3174375	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3174885..3174970	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3175050..3175171	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3176400..3176464	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3176562..3176631	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3176817..3176879	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3176976..3177040	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3177239..3177313	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3178455..3178718	exon
Sed0016197.1-exon	Sed0016197.1-exon-LG07:3179632..3180230	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3171190..3171522	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3172496..3172671	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3174001..3174189	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3174265..3174375	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3174885..3174970	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3175050..3175171	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3176400..3176464	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3176562..3176631	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3176817..3176879	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3176976..3177040	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3177239..3177313	CDS
Sed0016197.1-cds	Sed0016197.1-cds-LG07:3178455..3178668	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0016197.1-three_prime_utr	Sed0016197.1-three_prime_utr-LG07:3178669..3178718	three_prime_UTR
Sed0016197.1-three_prime_utr	Sed0016197.1-three_prime_utr-LG07:3179632..3180230	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0016197.1	Sed0016197.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding