Sed0015201.1 (mRNA) Chayote v1

Overview


Name	Sed0015201.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Translocase subunit seca
Location	LG11: 31506035 .. 31507128 (+)
Sequence length	1019
RNA-Seq Expression	Sed0015201.1
Synteny	Sed0015201.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACTACTTCCCAGTTTTTTAAGCTTAAACATGATTGAGTTAAGAAAATTTTAAAAAAAAGCACAGAAATTTTCAAGAAATGAGTTGATTTTTAATATCTTTATACAAAATCTCTTGGGTATTTTTATTTTGTTCTTGACCTTAATTTTTTTTTATGACTGCTTAATTAGTACCGATTCTCAGCTTGAAATTGATGTGTTTGACCAAATATACTTAATCCCCTGTTTTTTATCTCTCAATTTTCTTGAAAAAAATTCTATCTTTTTGTTTCTTACATCTAAATAAGCCCGTTTTCTTATCTTTCATAACAGAAAGAAAAGAATTTTAGTAGACGATGAACCGGGCGGCGGTTCAAATCAACATGTTTTCCGTTCATGAAGAGATGCAGAGCGCCGCCGCCAACCGTGGACGAGTGGTTTGCCCGAAGCCCCTCCGTGCCGGAATAACTAACACCACCGTCAACAACAACCCATTTAGTCAACGCTTTGATTCCTTAGTTGCCAACGATGCTCTGAATCTCCTCTGTTTTAAGGTAATTAATTTTGATTTAGATAATTAAATCTTAATTTTGAGTGATTAGTTAATTTTTGTTTGAGTGATTTTCCAGGGAGGTTGTGGATTGGATCATTTTAGCAGTTTTAGTACAGAATTAGCATCGCCGCCGCCGTTTTTATATGGGTCGCCGCCGTGTAGAGTTGCTAACCCGTTAATCCAAGACGCCCGGTTTGCGGCTCCTCCGCCGCCGCCGCCGCACTCGACCGGTTGGAAGGGCGGTTTTGTTCGGTCTAAATTTGGTAATAACCCGGTGGTGAGAATCGTGGGGTTCGATTGCTGCCTAGACATGGAGAGGCAAAACCGTAGCATCACGGCCCCGGCTTAAAAATCGAACCCAACCGAACCGTGGGTCGGTTCAACAATGGTGATAAAGAACACATGGGTTTAAGGTTATTAAATTTTTCTTTTTCCATAAATTCAAAATTTTAATTTAAAGTGAAATGTTTGAAAAAAAAAGTATCTTTTTGACCAGAACTCCATTATTGTAAATCATGTGAAATAGAAATCAAAGTAAATATGATGTGAAGAAAAAGGGGGG

mRNA sequence

GCAACTACTTCCCAGTTTTTTAAGCTTAAACATGATTGAGTTAAGAAAATTTTAAAAAAAAGCACAGAAATTTTCAAGAAATGAGTTGATTTTTAATATCTTTATACAAAATCTCTTGGGTATTTTTATTTTGTTCTTGACCTTAATTTTTTTTTATGACTGCTTAATTAGTACCGATTCTCAGCTTGAAATTGATGTGTTTGACCAAATATACTTAATCCCCTGTTTTTTATCTCTCAATTTTCTTGAAAAAAATTCTATCTTTTTGTTTCTTACATCTAAATAAGCCCGTTTTCTTATCTTTCATAACAGAAAGAAAAGAATTTTAGTAGACGATGAACCGGGCGGCGGTTCAAATCAACATGTTTTCCGTTCATGAAGAGATGCAGAGCGCCGCCGCCAACCGTGGACGAGTGGTTTGCCCGAAGCCCCTCCGTGCCGGAATAACTAACACCACCGTCAACAACAACCCATTTAGTCAACGCTTTGATTCCTTAGTTGCCAACGATGCTCTGAATCTCCTCTGTTTTAAGGGAGGTTGTGGATTGGATCATTTTAGCAGTTTTAGTACAGAATTAGCATCGCCGCCGCCGTTTTTATATGGGTCGCCGCCGTGTAGAGTTGCTAACCCGTTAATCCAAGACGCCCGGTTTGCGGCTCCTCCGCCGCCGCCGCCGCACTCGACCGGTTGGAAGGGCGGTTTTGTTCGGTCTAAATTTGGTAATAACCCGGTGGTGAGAATCGTGGGGTTCGATTGCTGCCTAGACATGGAGAGGCAAAACCGTAGCATCACGGCCCCGGCTTAAAAATCGAACCCAACCGAACCGTGGGTCGGTTCAACAATGGTGATAAAGAACACATGGGTTTAAGGTTATTAAATTTTTCTTTTTCCATAAATTCAAAATTTTAATTTAAAGTGAAATGTTTGAAAAAAAAAGTATCTTTTTGACCAGAACTCCATTATTGTAAATCATGTGAAATAGAAATCAAAGTAAATATGATGTGAAGAAAAAGGGGGG

Coding sequence (CDS)

ATGAACCGGGCGGCGGTTCAAATCAACATGTTTTCCGTTCATGAAGAGATGCAGAGCGCCGCCGCCAACCGTGGACGAGTGGTTTGCCCGAAGCCCCTCCGTGCCGGAATAACTAACACCACCGTCAACAACAACCCATTTAGTCAACGCTTTGATTCCTTAGTTGCCAACGATGCTCTGAATCTCCTCTGTTTTAAGGGAGGTTGTGGATTGGATCATTTTAGCAGTTTTAGTACAGAATTAGCATCGCCGCCGCCGTTTTTATATGGGTCGCCGCCGTGTAGAGTTGCTAACCCGTTAATCCAAGACGCCCGGTTTGCGGCTCCTCCGCCGCCGCCGCCGCACTCGACCGGTTGGAAGGGCGGTTTTGTTCGGTCTAAATTTGGTAATAACCCGGTGGTGAGAATCGTGGGGTTCGATTGCTGCCTAGACATGGAGAGGCAAAACCGTAGCATCACGGCCCCGGCTTAA

Protein sequence

MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARFAAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA

Homology

[Close]

BLAST of Sed0015201.1 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45
Identity = 105/173 (60.69%), Postives = 120/173 (69.36%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ AND
Sbjct: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL FKGGC L++F+S ST+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 61  ALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Sed0015201.1 vs. NCBI nr
Match: KAG7032498.1 (hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.8 bits (486), Expect = 4.4e-45
Identity = 104/173 (60.12%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ AND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL  KGGC L++F+S ST+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 61  ALDLLFLKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Sed0015201.1 vs. NCBI nr
Match: XP_023538993.1 (uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.0 bits (484), Expect = 7.5e-45
Identity = 104/173 (60.12%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ AND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL FK GC L++F+S ST+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 61  ALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFS 120

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Sed0015201.1 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 9.8e-45
Identity = 103/173 (59.54%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ N T N+NPF  RFDS+ AND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL FKGGC L++F S ST+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Sed0015201.1 vs. NCBI nr
Match: KAG6601783.1 (hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.5 bits (480), Expect = 2.2e-44
Identity = 103/173 (59.54%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ AND
Sbjct: 78  MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 137

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL  KGGC L++F+S  T+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 138 ALDLLFLKGGCDLENFNSSITQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 197

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 198 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 250

[Close]

BLAST of Sed0015201.1 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.6e-46
Identity = 105/173 (60.69%), Postives = 120/173 (69.36%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ NTTVN+NPF  RFDS+ AND
Sbjct: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL FKGGC L++F+S ST+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 61  ALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Sed0015201.1 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.7e-45
Identity = 103/173 (59.54%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAA--ANRGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVAND 60
           MN+ AVQ N+FSV EEM  AA    R R+VCPKP R G+ N T N+NPF  RFDS+ AND
Sbjct: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAAND 60

Query: 61  ALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------------ 120
           AL+LL FKGGC L++F S ST+LAS PP+L G+PP RVANPLIQDARF            
Sbjct: 61  ALDLLFFKGGCDLENFKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFS 120

Query: 121 ---AAPPPPPPHSTGWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
              A PP  PP ST   GG+VR  FGN P VRI GFDC LD ER+NRSI A A
Sbjct: 121 PEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Sed0015201.1 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.5e-38
Identity = 93/159 (58.49%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 13  VHEEMQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGL 72
           V EEMQ+AA + R R+VCPKP R G+ N T N+NPF  RFDS    DAL+LL  KGGCGL
Sbjct: 4   VCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGL 63

Query: 73  DHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF--------------AAPPPPPPHST 132
           ++F+S + +LAS PP+  GSPP RVANPLIQDARF              A+PP  PP S 
Sbjct: 64  ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSA 123

Query: 133 GWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
           G KGG VR  FG NP VRI GFDC LD ER+NRSI A A
Sbjct: 124 GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Sed0015201.1 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38
Identity = 93/159 (58.49%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 13  VHEEMQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGL 72
           V EEM+SAA + R R+VCPKP R G+ N T N+NPF  RFDS    DA++LL  KGGCGL
Sbjct: 4   VCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGL 63

Query: 73  DHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF--------------AAPPPPPPHST 132
           + F+S +T+LAS  P+  GSPP RVANPLIQDARF              A+PP  PP S 
Sbjct: 64  EKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSA 123

Query: 133 GWKGGFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
           G KGG VR  FGNNP VRI GFDC LD ER+NRSI A A
Sbjct: 124 GRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Sed0015201.1 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.7e-37
Identity = 90/155 (58.06%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 17  MQSAAAN-RGRVVCPKPLRAGITNTTVNNNPFSQRFDSLVANDALNLLCFKGGCGLDHFS 76
           M+SAA + R R+VCPKP R G+ N T N+NPF  RFDS    DA++LL  KGGCGL+ F+
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEKFN 60

Query: 77  SFSTELASPPPFLYGSPPCRVANPLIQDARF--------------AAPPPPPPHSTGWKG 136
           S +T+LAS  P+  GSPP RVANPLIQDARF              A+PP  PP S G KG
Sbjct: 61  SSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKG 120

Query: 137 GFVRSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
           G VR  FGNNP VRI GFDC LD ER+NRSI A A
Sbjct: 121 GCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

[Close]

BLAST of Sed0015201.1 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 4.7e-21
Identity = 75/188 (39.89%), Postives = 100/188 (53.19%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAAA-----NRGRVVCPKPLRAGITNTTVNNNP-------FS 60
           MN  AVQ N F+   +++S++      ++  VVCPKP R G+ N   +++P       FS
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRNN--HHHPSRSLRCYFS 60

Query: 61  QRF---DSLVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDAR 120
            +    +S    D L+++  K G G +  +     + SP PFL GSPP RVANPL QDAR
Sbjct: 61  HQLELCESKAETDILDIILTKDGYGAEQVN--KQVIDSPSPFLCGSPPSRVANPLTQDAR 120

Query: 121 F---------AAPP----PP---PPHSTGWKGG-FVRSKFGNNPVVRIVGFDCCLDMERQ 157
           F           PP    PP   P  S+G KGG  VR  FGN+P VR+ GFD CLD + +
Sbjct: 121 FRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFD-CLDRDSR 180

[Close]

BLAST of Sed0015201.1 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 63/178 (35.39%), Postives = 84/178 (47.19%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNN------NPFSQRFDSL 60
           MN   +Q N F       + +  R  V+CPKP R G  N   +       N   +  +S 
Sbjct: 2   MNSCGIQQNAFEEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESN 61

Query: 61  VANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-------A 120
             ++ L+ +  KGG G        T + +PP F  GSPP RV+NPL +D+ F       A
Sbjct: 62  SGSEILDFILTKGGGGGGEQDQTRT-VMTPPLFFTGSPPSRVSNPLTKDSLFREELLMVA 121

Query: 121 APPP-------PPPHSTGWKGGFV--RSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
           +P P       P P S+   G  V   + FGNNPVVR+VGFDC  D    NRSI+  A
Sbjct: 122 SPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of Sed0015201.1 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 63/178 (35.39%), Postives = 84/178 (47.19%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTVNN------NPFSQRFDSL 60
           MN   +Q N F       + +  R  V+CPKP R G  N   +       N   +  +S 
Sbjct: 2   MNSCGIQQNAFEEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESN 61

Query: 61  VANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-------A 120
             ++ L+ +  KGG G        T + +PP F  GSPP RV+NPL +D+ F       A
Sbjct: 62  SGSEILDFILTKGGGGGGEQDQTRT-VMTPPLFFTGSPPSRVSNPLTKDSLFREELLMVA 121

Query: 121 APPP-------PPPHSTGWKGGFV--RSKFGNNPVVRIVGFDCCLDMERQNRSITAPA 157
           +P P       P P S+   G  V   + FGNNPVVR+VGFDC  D    NRSI+  A
Sbjct: 122 SPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of Sed0015201.1 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15
Identity = 65/185 (35.14%), Postives = 81/185 (43.78%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAAANRGRVVCPKPLRAGITNTTV-------NNNPFSQRFDS 60
           MN   +Q N F   EEM      +  VVCPKP R G+    V        +   +   DS
Sbjct: 67  MNHCNLQQNAFMSREEMM-GFDRKDLVVCPKPRRVGLLANNVIRPLRLHMSQAAADLCDS 126

Query: 61  LVANDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF------- 120
               + L ++  K   G     +    L+S PP+  GSPP R ANPL QDARF       
Sbjct: 127 KAGAELLEIIRRKEDNG-----TIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNP 186

Query: 121 --------------AAPPPPPPHSTGWKGGFVRSKFG-NNPVVRIVGFDCCLDMERQNRS 157
                           P P    S+    G VR KFG N+P VR+ GFD CL+ +RQN S
Sbjct: 187 ISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFD-CLNRDRQNSS 244

[Close]

BLAST of Sed0015201.1 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 65/170 (38.24%), Postives = 79/170 (46.47%), Query Frame = 0


Query: 1   MNRAAVQINMFSVHEEMQSAAANRGR----VVCPKPLRAGITNTTVNNNPFSQRFDSLVA 60
           MN  ++Q N F   EE +            VVCPKP RA   N  +   PF   F    A
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRRA---NNVI--RPFRLHFSLSGA 60

Query: 61  NDALNLLCFKGGCGLDHFSSFSTELASPPPFLYGSPPCRVANPLIQDARF-------AAP 120
           +D  +     G   LD F    +  +  PPF  GSPP R ANPL QDARF        +P
Sbjct: 61  DDVCDSKA--GEDLLDIFRRKESVSSRSPPFFLGSPPSRAANPLAQDARFGDEKLNTVSP 120

Query: 121 PPPP--PHSTGWKGGFVRSKFGNNP-VVRIVGFDCCLDMERQNRSITAPA 157
              P  P ++  K G  R KFG  P  VR+ GFD CL+ +R N SI A A
Sbjct: 121 SLSPLLPSASRVKSGCGRMKFGVKPATVRVEGFD-CLNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of Sed0015201.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923501.1	1.2e-45	60.69	uncharacterized protein LOC111431174 [Cucurbita moschata]	[more]
KAG7032498.1	4.4e-45	60.12	hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023538993.1	7.5e-45	60.12	uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]	[more]
XP_022971782.1	9.8e-45	59.54	uncharacterized protein LOC111470460 [Cucurbita maxima]	[more]
KAG6601783.1	2.2e-44	59.54	hypothetical protein SDJN03_07016, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0015201.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015201.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6Z2	5.6e-46	60.69	uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1I2X1	4.7e-45	59.54	uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460...	[more]
A0A0A0KRF1	1.5e-38	58.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
A0A1S3CR46	2.5e-38	58.49	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
A0A5D3C147	4.7e-37	58.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0015201.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	4.7e-21	39.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	4.1e-17	35.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	4.1e-17	35.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	1.3e-15	35.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	2.5e-14	38.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..155
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..155

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0015201	Sed0015201	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015201.1-five_prime_utr	Sed0015201.1-five_prime_utr-LG11:31506035..31506369	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015201.1-exon	Sed0015201.1-exon-LG11:31506035..31506567	exon
Sed0015201.1-exon	Sed0015201.1-exon-LG11:31506643..31507128	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015201.1-cds	Sed0015201.1-cds-LG11:31506370..31506567	CDS
Sed0015201.1-cds	Sed0015201.1-cds-LG11:31506643..31506915	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0015201.1-three_prime_utr	Sed0015201.1-three_prime_utr-LG11:31506916..31507128	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0015201.1	Sed0015201.1-protein	polypeptide