Sed0014867.2 (mRNA) Chayote v1

Overview


Name	Sed0014867.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	HR-like lesion-inducing protein-related
Location	LG12: 6552130 .. 6554725 (-)
Sequence length	1560
RNA-Seq Expression	Sed0014867.2
Synteny	Sed0014867.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAAACTGTTGGTATTAAAAAGAAAAAAAAGGGATATTTACTTTTTGGTCATTAAAAAAGAAATTTAATTTCGAGTAGATCTAAATTGAATTGATTGTTTGGAATTTGAATTTGTGGAGCCGCGGTGGTTGAGAAATTGTTTGGATTTCATAATTAAATCACTCCAAATCCCCAATCTGTAGGTTTCCCATTTTAAGGCGCCGCCATCTCAAAGCTTTCATCGCCCAATCGGAAGCGAAGAAGAAGAAGAAGCCGAGATCTGATCTTCAGCAAAATCAAACATGGGGTTCTTCTCCTTCCTTGGACGCCTCTTATTCGCCTCCATCTTCATCCTCTCCGCTTGCCAAATGTAACATTTCTTCTCCCATTTCAGATTTCCCAAATCTGTCCTTAATCGATCCCAATCTTTGTTTTTCTTATGTTCTTGCCTTTTATTGCAATGGGTCTTGTGGGTTTTCTTTTCTGTGATTGTTTACTGCTTGTAATTGCGTATTGGGTGTCTTTCAATAATGGGTTTTTTGTTTCATGAATTATTCGTTTAATGTCTGGAATTTTTATGTTCTGATTCTTTCAGAAAATGGGGAGAATATGAAAAGGGTTATACTTTCAGGGTTCGTTTGTTTCTGTTGGGGAAAATTCATTGGTTTTGTTCTTCTTCCAAACTTGAATGAACTATGTTAAATGAGATTATGGGAGTATAGAATGAACTGTCATCTGCATGTGTTTGGATGGGCTTTTAATGTTCAATGAGTGCAAGTCAAGGTAATTAATTACTCAAAATTTTCTATTAATTTATTTTAGTATTCAAATGTTATAGGGTTAGATGTTATGTCTCGTGAGTTTGAACAATTATCTAGTTAAACACTGGGCTAGCCTGAGAGTATGGTTTAATCCGAATACTCATGAATATCAAAAGAAAATAGGCATGGCAAAGATCCTAGCCTAAACTTTTTTCCTAGTGTGACTAAGTATAAATTGAGAATGCTGGTGGATATCAAAAAGAAAATAGGTGAAGTTCTTGGTCCAAACTTTTCTGTAGCATTTTATTTTTCTGTGCACATTAGGATGTTTTTTTTTCTTTGAATCTCTAGCCACTTACCTCCACCCTTTTTTTTTTGCACTTTCAGCAATTTTGGTTTTTTTTTAATCTAAATGTCAAAGAAACAGTTCTCATCTATTCTCTGCGTTTATAACATACATGCACAAATATCTTGGGCTAAATGCTAATGTTTACCAAGAACTCTCTTATTCTGTCTGACTTTATATACATCATTTGGTTTAGGTTTAATGAGTTTGGAAATAATGGTGGGCCGGCAGCTGCGGAATTGTCTCTAAAGGTAGCTGTTTTGAGGAGAAATTTATCGTCCAAGCTGGGGGTAGCGATACCTGATATTGATGTAAGACCATATATTTAATCATCTCATTGCCTTCAATTTTGTCTGCTATTCTCTTCATATTCAGCAATTCAATGTTGACAATATGAGTATGCTTTAACCTTTCCTGTTCAAACTCTGATAAATTTCTGCAGATGAGACACTTGGTTGCCATTTCTTTAGCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGCAGTAGAGTTGGAGCTTATCTCCTGGTAAGAGTTTACCATATTCTTAATTTTAGCCTTACGTGTCTGCAGGGGGTGGCACAATAGTTGAAGACTTGGGCTTTGAAGGTATAGCGTATGCTTTCTTCAAGGTCTCAAGTTCAAGACTCGTCTGTGGCATTGCTCCTTCGATGTCTCCCGGTACCTGGCCTAAGGACGGGCGTGGTTACCCTTGTTTTGAAAAAGAAAAATTTAGCTTTTAATTATAAATCTGTTTACATTTTTATATTGGGGGTCAGTGTTACTCTAAGTCTATGCACGTCTTTAAAGAAAATATTGCTTTCTCGTTCAGCTTCTGCAGTTGGCTATTATCACTCCTGTTCTTTATGATTTCTTCAACTTTAGCCTTCAGAAGCCTTCCTTTGGTATCCAGCTTGGTGATTTCTTGCAGGTTTGTCCATGTGTTTCAGTTTAATCATCTCAATTACCTTTGGGAAAAAAAAAACTTATGGAATCCTATTTTTCTTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTCTTCTTAGGGATGAAGAGCACAGTTCCAAAGAGGCAACCGAAAAAAAAGACGCCTAAAACGAAAACATATTAGATTCGTCAAAAAAGCAACCGTTGGCGATTGGGTTAATTTGCTCTGGCATTCTGTTCTTAGGTTACACATTTTCATCATTGACACAAGCAAGTTATTTATTTCTCATTTAGTTGGCTGTTTTCTTTTTCTCGGATTTTACTTAGCTTCATTGTTGACCTTTGATGAGTTACTATTCAATCTGAGCTGTGGCATATAGGTCTTTGTACTTGAACTTGGTAGAAAAGAATTAGAAGTCATTTTTTTTACTATTAATATTTCAGTTGGAGCATCTTTCTGGGATTATTTCCATTTTTTGTTATGACCTTTTTAAGGAGTAACACTGTAACCAGTTTGCTCCATAATAGTTGATTCCGTTCTACCTTTACCGTCTCGACTTTGTACAAATTGCTT

mRNA sequence

CTTTAAACTGTTGGTATTAAAAAGAAAAAAAAGGGATATTTACTTTTTGGTCATTAAAAAAGAAATTTAATTTCGAGTAGATCTAAATTGAATTGATTGTTTGGAATTTGAATTTGTGGAGCCGCGGTGGTTGAGAAATTGTTTGGATTTCATAATTAAATCACTCCAAATCCCCAATCTGTAGGTTTCCCATTTTAAGGCGCCGCCATCTCAAAGCTTTCATCGCCCAATCGGAAGCGAAGAAGAAGAAGAAGCCGAGATCTGATCTTCAGCAAAATCAAACATGGGGTTCTTCTCCTTCCTTGGACGCCTCTTATTCGCCTCCATCTTCATCCTCTCCGCTTGCCAAATGTAACATTTCTTCTCCCATTTCAGATTTCCCAAATCTGTCCTTAATCGATCCCAATCTTTGTTTTTCTTATGTTCTTGCCTTTTATTGCAATGGGTCTTGTGGGTTTTCTTTTCTGTGATTGTTTACTGCTTGTAATTGCGTATTGGGTGTCTTTCAATAATGGGTTTTTTGTTTCATGAATTATTCGTTTAATGTCTGGAATTTTTATGTTCTGATTCTTTCAGAAAATGGGGAGAATATGAAAAGGGTTATACTTTCAGGGTTCGTTTGTTTCTGTTGGGGAAAATTCATTGGTTTTGTTCTTCTTCCAAACTTGAATGAACTATGTTAAATGAGATTATGGGAGTATAGAATGAACTGTCATCTGCATGTGTTTGGATGGGCTTTTAATGTTCAATGAGTGCAAGTCAAGGTTTAATGAGTTTGGAAATAATGGTGGGCCGGCAGCTGCGGAATTGTCTCTAAAGGTAGCTGTTTTGAGGAGAAATTTATCGTCCAAGCTGGGGGTAGCGATACCTGATATTGATATGAGACACTTGGTTGCCATTTCTTTAGCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGCAGTAGAGTTGGAGCTTATCTCCTGCTTCTGCAGTTGGCTATTATCACTCCTGTTCTTTATGATTTCTTCAACTTTAGCCTTCAGAAGCCTTCCTTTGGTATCCAGCTTGGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTCTTCTTAGGGATGAAGAGCACAGTTCCAAAGAGGCAACCGAAAAAAAAGACGCCTAAAACGAAAACATATTAGATTCGTCAAAAAAGCAACCGTTGGCGATTGGGTTAATTTGCTCTGGCATTCTGTTCTTAGGTTACACATTTTCATCATTGACACAAGCAAGTTATTTATTTCTCATTTAGTTGGCTGTTTTCTTTTTCTCGGATTTTACTTAGCTTCATTGTTGACCTTTGATGAGTTACTATTCAATCTGAGCTGTGGCATATAGGTCTTTGTACTTGAACTTGGTAGAAAAGAATTAGAAGTCATTTTTTTTACTATTAATATTTCAGTTGGAGCATCTTTCTGGGATTATTTCCATTTTTTGTTATGACCTTTTTAAGGAGTAACACTGTAACCAGTTTGCTCCATAATAGTTGATTCCGTTCTACCTTTACCGTCTCGACTTTGTACAAATTGCTT

Coding sequence (CDS)

ATGTGTTTGGATGGGCTTTTAATGTTCAATGAGTGCAAGTCAAGGTTTAATGAGTTTGGAAATAATGGTGGGCCGGCAGCTGCGGAATTGTCTCTAAAGGTAGCTGTTTTGAGGAGAAATTTATCGTCCAAGCTGGGGGTAGCGATACCTGATATTGATATGAGACACTTGGTTGCCATTTCTTTAGCTCTTAAAGGAATTGGAGGCCTTCTGTTTGTTTTTGGCAGTAGAGTTGGAGCTTATCTCCTGCTTCTGCAGTTGGCTATTATCACTCCTGTTCTTTATGATTTCTTCAACTTTAGCCTTCAGAAGCCTTCCTTTGGTATCCAGCTTGGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGCTTTTCTTCTTAGGGATGAAGAGCACAGTTCCAAAGAGGCAACCGAAAAAAAAGACGCCTAAAACGAAAACATATTAG

Protein sequence

MCLDGLLMFNECKSRFNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVPKRQPKKKTPKTKTY

Homology

[Close]

BLAST of Sed0014867.2 vs. NCBI nr
Match: XP_022975056.1 (uncharacterized protein LOC111474025 [Cucurbita maxima])

HSP 1 Score: 232.3 bits (591), Expect = 2.8e-57
Identity = 122/134 (91.04%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEF NNGG AAA LS KVAVLRRNLSSKLGVAIPDID+ HLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP 135
           S VGAYLLLLQLAIITPVLYDFFNFSLQKP FGI LGDFLQHIALFGALLFFLGMK+TVP
Sbjct: 84  SSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLGDFLQHIALFGALLFFLGMKNTVP 143

Query: 136 KRQPKKKTPKTKTY 150
           KRQPKKK PKTKTY
Sbjct: 144 KRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0014867.2 vs. NCBI nr
Match: XP_023538935.1 (uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 121/134 (90.30%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEF NNGG AAAELS KVAVLRRNLSSKLGVAIPDID+ HLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP 135
           S VGAYLLLLQLAIITPVLYDFFN S QKP FGI LGDFLQHIALFGALLFFLGMK+TVP
Sbjct: 84  SSVGAYLLLLQLAIITPVLYDFFNISPQKPFFGILLGDFLQHIALFGALLFFLGMKNTVP 143

Query: 136 KRQPKKKTPKTKTY 150
           KRQPKKK PKTKTY
Sbjct: 144 KRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0014867.2 vs. NCBI nr
Match: KAG6597378.1 (hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.0 bits (580), Expect = 5.3e-56
Identity = 120/134 (89.55%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEF NNGG AAAELS KVAVLRRNLSSKLGVAIPDID+ HLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP 135
           S VGAYLLLLQLAIITPVLYDFFNFS Q P FGI L DFLQHIALFGALLFFLGMK+TVP
Sbjct: 84  SSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLSDFLQHIALFGALLFFLGMKNTVP 143

Query: 136 KRQPKKKTPKTKTY 150
           KRQPKKK PKTKTY
Sbjct: 144 KRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0014867.2 vs. NCBI nr
Match: XP_022942464.1 (uncharacterized protein LOC111447492 [Cucurbita moschata])

HSP 1 Score: 224.9 bits (572), Expect = 4.5e-55
Identity = 119/134 (88.81%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEF NNGG AAAELS KVAVLRRNLSSKLGVAIPDID+ HLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP 135
           S VGAYLLLLQLAIITPVLYDFFNFS Q P FGI L DFLQHIALFGALLFFL MK+TVP
Sbjct: 84  SSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLSDFLQHIALFGALLFFLEMKNTVP 143

Query: 136 KRQPKKKTPKTKTY 150
           KRQPKKK PKTKTY
Sbjct: 144 KRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0014867.2 vs. NCBI nr
Match: KAG7018782.1 (hypothetical protein SDJN02_20655 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54
Identity = 117/136 (86.03%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 15  RFNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVF 74
           RFNEFG+NGGPAAAELSLKVA LRRNLSSKLGVAIPDID+RHLVAISL+LKGIGGLLFVF
Sbjct: 18  RFNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVF 77

Query: 75  GSRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQL-GDFLQHIALFGALLFFLGMKST 134
           GSRVGAYLLLLQLAIITPVLYDFFN+S QKP F I L  DFLQHIALFGAL+FFLGMK+T
Sbjct: 78  GSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTT 137

Query: 135 VPKRQPKKKTPKTKTY 150
            P++  KKKT KTKTY
Sbjct: 138 GPRKHSKKKTSKTKTY 153

[Close]

BLAST of Sed0014867.2 vs. ExPASy TrEMBL
Match: A0A6J1ID53 (uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57
Identity = 122/134 (91.04%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEF NNGG AAA LS KVAVLRRNLSSKLGVAIPDID+ HLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFSNNGGSAAAVLSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP 135
           S VGAYLLLLQLAIITPVLYDFFNFSLQKP FGI LGDFLQHIALFGALLFFLGMK+TVP
Sbjct: 84  SSVGAYLLLLQLAIITPVLYDFFNFSLQKPFFGILLGDFLQHIALFGALLFFLGMKNTVP 143

Query: 136 KRQPKKKTPKTKTY 150
           KRQPKKK PKTKTY
Sbjct: 144 KRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0014867.2 vs. ExPASy TrEMBL
Match: A0A6J1FRE6 (uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC111447492 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.2e-55
Identity = 119/134 (88.81%), Postives = 122/134 (91.04%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEF NNGG AAAELS KVAVLRRNLSSKLGVAIPDID+ HLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFSNNGGSAAAELSPKVAVLRRNLSSKLGVAIPDIDVTHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP 135
           S VGAYLLLLQLAIITPVLYDFFNFS Q P FGI L DFLQHIALFGALLFFL MK+TVP
Sbjct: 84  SSVGAYLLLLQLAIITPVLYDFFNFSPQNPFFGILLSDFLQHIALFGALLFFLEMKNTVP 143

Query: 136 KRQPKKKTPKTKTY 150
           KRQPKKK PKTKTY
Sbjct: 144 KRQPKKKAPKTKTY 157

[Close]

BLAST of Sed0014867.2 vs. ExPASy TrEMBL
Match: A0A6J1E8C2 (uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC111431764 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 116/135 (85.93%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEFG+NGGPAAAELSLKVAVLRRNLSSKLGVAIP+ID+RHLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFGHNGGPAAAELSLKVAVLRRNLSSKLGVAIPEIDVRHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQL-GDFLQHIALFGALLFFLGMKSTV 135
           SRVGAYLLLLQLAIITPVLYDFFN+S QKP F I L  DFLQHIALFGAL+FFLGMK+T 
Sbjct: 84  SRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTTG 143

Query: 136 PKRQPKKKTPKTKTY 150
           P++  KKKT KTKTY
Sbjct: 144 PRKHSKKKTSKTKTY 158

[Close]

BLAST of Sed0014867.2 vs. ExPASy TrEMBL
Match: A0A1S3AXB3 (uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483616 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEFGNNGGPAAAELS KVAVLRRNLSSKL VAIPDID+RHLVA+SL+LKGIGGLLFVFG
Sbjct: 24  FNEFGNNGGPAAAELSSKVAVLRRNLSSKLAVAIPDIDVRHLVALSLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTV- 135
           SRVGAYLLLL LAIITPVL+DFFNFSLQKP+FGI L DFLQHIALFGALLFFLGMKST  
Sbjct: 84  SRVGAYLLLLHLAIITPVLFDFFNFSLQKPNFGIPLSDFLQHIALFGALLFFLGMKSTTS 143

Query: 136 PKRQPKKKTPKTKTY 150
           PK+  KKKT K K +
Sbjct: 144 PKKPLKKKTQKAKAH 158

[Close]

BLAST of Sed0014867.2 vs. ExPASy TrEMBL
Match: A0A6J1ISL2 (uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.6e-53
Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FNEFG+NGGPA+AEL+LKVAVLRRNLSSKLGVAIPDID+RHLVAISL+LKGIGGLLFVFG
Sbjct: 24  FNEFGHNGGPASAELALKVAVLRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQL-GDFLQHIALFGALLFFLGMKSTV 135
           SRVGAYLLLLQLAIITPVLYDFFN+S QKP F I L  DFLQHIALFGAL+FFLGMK+T 
Sbjct: 84  SRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTTG 143

Query: 136 PKRQPKKKTPKTKTY 150
           P++  KKKT KTKTY
Sbjct: 144 PRKHSKKKTSKTKTY 158

[Close]

BLAST of Sed0014867.2 vs. TAIR 10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-32
Identity = 69/128 (53.91%), Postives = 97/128 (75.78%), Query Frame = 0


Query: 21  NNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFGSRVGA 80
           N+GGPAA EL+ K+ +++ +LSS+LGV +P I++R +VA  +ALKG+GGLLFV G+  GA
Sbjct: 25  NDGGPAAKELAPKLDLVKAHLSSRLGVTLPKIEVRQVVATIIALKGVGGLLFVIGNTFGA 84

Query: 81  YLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMKSTVP-KRQP 140
           YLL   L +  P+LYDF+N+  Q+  F + L +FLQ +ALFGALLFF+GMK++ P K+  
Sbjct: 85  YLLASYLVVFGPILYDFYNYGPQERHFSLLLTEFLQSVALFGALLFFIGMKNSTPAKKNL 144

Query: 141 KKKTPKTK 148
           KK+TPK K
Sbjct: 145 KKRTPKPK 152

[Close]

BLAST of Sed0014867.2 vs. TAIR 10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-31
Identity = 68/134 (50.75%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FN+FG +GGPAA EL+ K+ + + +LSS LGV++P+++++ +V   +ALKG+GGLLFV G
Sbjct: 24  FNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNLEVKQVVWAIVALKGLGGLLFVIG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMK--ST 135
           +  GAYLL + L +++P+LYDF+N+  +   F + L +FLQ +AL GALLFF+GMK  +T
Sbjct: 84  NIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLTEFLQSVALLGALLFFIGMKNSTT 143

Query: 136 VPKRQPKKKTPKTK 148
             KR  KK+TPK K
Sbjct: 144 SSKRILKKRTPKPK 157

[Close]

BLAST of Sed0014867.2 vs. TAIR 10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29
Identity = 67/133 (50.38%), Postives = 89/133 (66.92%), Query Frame = 0


Query: 16  FNEFGNNGGPAAAELSLKVAVLRRNLSSKLGVAIPDIDMRHLVAISLALKGIGGLLFVFG 75
           FN+FG +GG +A  L  K      ++++  G  +P +DM+ LVA ++ALKGIGGLLFVFG
Sbjct: 24  FNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPVDMKILVAAAIALKGIGGLLFVFG 83

Query: 76  SRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQHIALFGALLFFLGMK-STV 135
           S +GAYLLLL  A+ TP+LYDF+N+ + +  FG     F Q +AL G LLFF+GMK S  
Sbjct: 84  SSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFSKFTQSLALLGGLLFFIGMKNSRK 143

Query: 136 PKRQPKKKTPKTK 148
             RQ +KK PK K
Sbjct: 144 HGRQLRKKAPKAK 156

[Close]

BLAST of Sed0014867.2 vs. TAIR 10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 51.6 bits (122), Expect = 6.3e-07
Identity = 24/62 (38.71%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 57  LVAISLALKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGIQLGDFLQ 116
           +VA+ + +K +GG+LF+F + VGA LLL+  AI++P+LYDF+N    +  F +    F +
Sbjct: 65  IVALGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYTKFKE 124

Query: 117 HI 119
            +
Sbjct: 125 FV 126

[Close]

BLAST of Sed0014867.2 vs. TAIR 10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related )

HSP 1 Score: 51.6 bits (122), Expect = 6.3e-07
Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 54  MRHLVAISLALKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNFSLQKPSFGI 110
           ++HL+ +S+ ++ +GGL+F++GS  GA+LLL+   I T V +DF+N  L    FG+
Sbjct: 66  IKHLMTVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGL 121

The following BLAST results are available for this feature:

BLAST of Sed0014867.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975056.1	2.8e-57	91.04	uncharacterized protein LOC111474025 [Cucurbita maxima]	[more]
XP_023538935.1	1.4e-56	90.30	uncharacterized protein LOC111799718 [Cucurbita pepo subsp. pepo]	[more]
KAG6597378.1	5.3e-56	89.55	hypothetical protein SDJN03_10558, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942464.1	4.5e-55	88.81	uncharacterized protein LOC111447492 [Cucurbita moschata]	[more]
KAG7018782.1	8.4e-54	86.03	hypothetical protein SDJN02_20655 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0014867.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0014867.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ID53	1.4e-57	91.04	uncharacterized protein LOC111474025 OS=Cucurbita maxima OX=3661 GN=LOC111474025...	[more]
A0A6J1FRE6	2.2e-55	88.81	uncharacterized protein LOC111447492 OS=Cucurbita moschata OX=3662 GN=LOC1114474...	[more]
A0A6J1E8C2	1.6e-53	85.93	uncharacterized protein LOC111431764 OS=Cucurbita moschata OX=3662 GN=LOC1114317...	[more]
A0A1S3AXB3	1.6e-53	85.93	uncharacterized protein LOC103483616 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1ISL2	2.6e-53	85.19	uncharacterized protein LOC111479010 OS=Cucurbita maxima OX=3661 GN=LOC111479010...	[more]

BLAST of Sed0014867.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43460.1	2.5e-32	53.91	HR-like lesion-inducing protein-related	[more]
AT1G04340.1	1.6e-31	50.75	HR-like lesion-inducing protein-related	[more]
AT4G14420.1	2.0e-29	50.38	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	6.3e-07	38.71	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	6.3e-07	41.07	HR-like lesion-inducing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 14..130 e-value: 1.7E-39 score: 135.1
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 13..148
None	No IPR available	PANTHER	PTHR31474:SF4	BNAA10G27800D PROTEIN	coord: 13..148

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0014867	Sed0014867	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014867.2-three_prime_utr	Sed0014867.2-three_prime_utr-LG12:6552130..6552519	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014867.2-exon	Sed0014867.2-exon-LG12:6552130..6552621	exon
Sed0014867.2-exon	Sed0014867.2-exon-LG12:6552703..6552801	exon
Sed0014867.2-exon	Sed0014867.2-exon-LG12:6553106..6553195	exon
Sed0014867.2-exon	Sed0014867.2-exon-LG12:6553327..6553441	exon
Sed0014867.2-exon	Sed0014867.2-exon-LG12:6553962..6554725	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014867.2-cds	Sed0014867.2-cds-LG12:6552520..6552621	CDS
Sed0014867.2-cds	Sed0014867.2-cds-LG12:6552703..6552801	CDS
Sed0014867.2-cds	Sed0014867.2-cds-LG12:6553106..6553195	CDS
Sed0014867.2-cds	Sed0014867.2-cds-LG12:6553327..6553441	CDS
Sed0014867.2-cds	Sed0014867.2-cds-LG12:6553962..6554005	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014867.2-five_prime_utr	Sed0014867.2-five_prime_utr-LG12:6554006..6554725	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0014867.2	Sed0014867.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane