Sed0014244.1 (mRNA) Chayote v1

Overview


Name	Sed0014244.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	LG08: 12446284 .. 12449795 (-)
Sequence length	1340
RNA-Seq Expression	Sed0014244.1
Synteny	Sed0014244.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATATTTAATTTTGAGATCTGTGGTGCACATCACGTGACTAGCATCACCTTACATTTTTGAGTCCCACCTCACTCTCTTACAACCTTATCAAGCCCTAGTTTGAAATTGACCTAATTTTCTCCTTTCCTCCATTCGAGCTCGCCATTTTTGTCTTCCATGGACTTCGACGGTGTTCGCAAGAGGGAGAGAGCTGAAACCGCCTTCTATGGCAATGGCGCCTTCAAGAAGTCCAAATCAGGTTCGTAAATGCTACTCTTCAAACTCTTACTTCGGCCTTCTCATCAGCTTTTGGCGTTTTCTTGTTAACCTCGTTCGCGGATTCGGTGGCTTGTGTGTTCCTGCTTGTTGCATACTGTTTGTTTGGATTCTAATGAAAAGGAAGTGTATTTCGTTAGTTATTCGTTTCTGCGTCTTGGTCCGTTTTGGTATAATTTGGAAGTTTCTTTAGGTATTTGATTTTGGTTTAGGATTCTTTTTGGCCTCAACTGAACTCAATTTCGTATCCTTTGCTTGGAGTTCATAATTGTTTAACCCTGCAGTTTATATTCATAGGGCTATGCATTTATTTATTTATTTATTTTTATTTATTTGCATATCTCTCCCTATTGTTATTGTTTTGTTGATAATTTTTGAAGTAGAAGAAACAGTTTGTGTTATATTCTGCTGCGTAATTGATTTAATTGGTATGTTATCCAGATATTAGTTTTTTTTTTTATTTTCCCGGTTTTTTTAAAAAAGTTATCCAGATATTAGTTGTCTTTACTATCTCTATTTCAGTCAATAAAACAATGTTCAAGTTGGTTATATAGACTTTTGTACACTTTGATACAAGAAGCTACGTGGAAGTGTACCAACAAATTACATGAAACTTCTCTACTGAGAAATCAGTGTGGATAGACTGCAATTACAAAATGGAAAGGAAATAGTTGGTTTACGATTACGAAATATTTGTTTTGTTTGAGCATATTAACTTTGGAATGTAGTTTACTTTCTTATTCCTCTTGCTGGCTCTAGCCCTTTTCACCGTCTTAATAGGTAGTATGTTGTCTTAGTGATGAACATGGTAAAATATAATTAGATATTTTAAGCTGGGAGAACAATAACACACTGAAGTTTAACTAAGGAAATTTAATTAATGTTCTGCGACAGAAATGGACTCTACTGGTTTAGGAAGCAAAACAAGGCCTTGCACAAAGTTTTTCAGGTTCTAATCTTGATTAGTATAATGCAGTCAATCTATTGTTAATATTCTTTAATTTCCTGAAATGTTTACTTAATTTTCTCAAGTAAAATTGTTGTGATTTGGACTAATGAATTGGTTAGTTAAAGTTGTTTCAGGTTATGCATTGATGTTATCATAACAACAATGATTGAACTGAAATAGATGATTCACAAGAATCCAGTGGGAATAATCTTTTGCTGGAATTTGTTTAAATTGAAATATGAAAGCAATAACATTTGATGGCTAACCCGTTCTACTTCTCTCTAAAGTGGATAAATAGTTCTTACTTGGATCTTTCCAACTAAGCAGTTTGATTCAGAATTGAATTTGGCATCCATCTTAAGTAATGGTACAGGTTTTGGTTAAAGAACAAAAACGTTGGTATTGGTACAGGTTATTCTATTTGTTCCAATGCTACCACATGAGCCATATACCAATTTTTTAGGTGCAAATGGGACCTTTGTTTATCTTCGATAGTATTTTTGTGCCATATACATATACGGTATACCAATTTTTAGCTGCAAGTGGGACTTTTGTTTATTTTTGTTAGTAAGATAGTATTCCTAATTTATATACTTTTACGCATACCTTTTACCAGGTAATGTCTTGTGACTATTGTGAAGCCCCAACCACCTTTGTATACAATATTATGTATATAATCTAAAAGTCTGTACATGTTATGCTAATATTCTGCCTGACTTAATTCGCATGAAATTATTTTGTTCAATGATGTTCAAATCAGTTAAGTGTTCAGTTTATTTTCCGGTTAAGGTTTGCACATTAGAGGTTTCTGATACAATTCCACTTGTTTCTCTCGCAAAATAGAATAGTTATCTTGAAACTTGAAAGTCAGGCATCTTTGTATTTTTGTAGTGGTTTTTTTTTTCTTTTCGTTTCAGATAGGAAACATGTTTTTTTTAATTCGAGTGGTCTTTTATAATCTTCTCGGCGTTGCCTTCTTTTGTAATAACCCTATTCTTTTGTAATTTTATACATTAATGTAATTGTTTCTTATAAAAAAAGAGGAAACATGTTTTGGATTTATGTTATTTAAGTATAGTTCATTAAGTCTTATTGTGGACTACTCCTTGGAAATACTTTTGCTGGTCATTTCTACTCCTAAGCTATAATACGGTCATTGGCTTTTTCTTTGTTTTGTTAAATTCTTGTATGTGTTTGTACAAGTATTCTGGATTGTGATGTTATTGCGAAGTTCACTCCTTTTTTGAAATAAAAAATGCAGCACGTCTGGTTGCCCTTTTGGTGATGGGTGTCATTTTGCACATCATGTTCCTGGTGGATTCAAAGCAATTCCTCAGATGATCAATCCTGCTATTCCCCCTGGCATTAGAAATCCTGTCGGCCCCCCATCGTTTCCAGATGGTGGCCCTCCTCCAGCTGCGAAGACTCGTTTGTGCACGAAATTCAACTCAGCTGAAGGCTGCAGGTTCGGCGACAAATGTCGTTTTGCTCATGGTGAGTGGGAACTTGGAATGCCGAACCACCCTCCACTGGAACACGGTAGAATGGGAGGACCACCAATGCAACAACCCAGAATGGGTGGTGGCTGGAATTTTCCTCCACCACCACCTAATCATGTACCCTCTGCTAGCTTTGGCGCCTCGGCAACTGCAAAGATCAGCGTCGATGCAGCGCTTGCAGGTCCCATAATTGGGAAAAATGGGGTCAACTCAAAGAGTATCTGTCGTATGACAGGTGCAAGGCTTTCTATAAAAGAACACGAGTCGGACTCTAACCTGAAGAACATTGAGTTTGAGGGTACTTTTGATCAGATCAATCAAGCTAGTTCAATGGTGCGCGAGTTGATTGCGAACCTTGGTGATGCCGCTGCCAATAAGCCCACGAGGCACCAGAAATCTTCTGGCTCGGTAATCAACTTTAAGACCAAGCTTTGTGCTAATTTTGAAAAGGGTACTTGTACGTTTAGAGACAAATGCCATTTTGCACATGGCGAAAGTGAATTGCAGAAATGAGGTATGTGAATGGCTGGCCTTGTAGCAGTGAGTTTCTTCTTGGACAAAATTTTCTTTCGTTTTGCTTTGCTTCTCTGTTTGAATCATTTGTTAAATTTGAAAATCGATATCTGATTACTTGTAAGACAAGCAATTTTCATCTAAGCTGCAATGGGGACGAGGTTTGAAGGGTTCTTAATTGTGCTATTGCTCTCCTTTGTCTAGAAATAGAATCCCTTCAATGTGCATTTTGAAACTCATTTTGGATGGATTTGAGAATTTTGTCCTGACAGGAAAAAATGTGCACCAATTAC

mRNA sequence

GAAATATTTAATTTTGAGATCTGTGGTGCACATCACGTGACTAGCATCACCTTACATTTTTGAGTCCCACCTCACTCTCTTACAACCTTATCAAGCCCTAGTTTGAAATTGACCTAATTTTCTCCTTTCCTCCATTCGAGCTCGCCATTTTTGTCTTCCATGGACTTCGACGGTGTTCGCAAGAGGGAGAGAGCTGAAACCGCCTTCTATGGCAATGGCGCCTTCAAGAAGTCCAAATCAGAAATGGACTCTACTGGTTTAGGAAGCAAAACAAGGCCTTGCACAAAGTTTTTCAGCACGTCTGGTTGCCCTTTTGGTGATGGGTGTCATTTTGCACATCATGTTCCTGGTGGATTCAAAGCAATTCCTCAGATGATCAATCCTGCTATTCCCCCTGGCATTAGAAATCCTGTCGGCCCCCCATCGTTTCCAGATGGTGGCCCTCCTCCAGCTGCGAAGACTCGTTTGTGCACGAAATTCAACTCAGCTGAAGGCTGCAGGTTCGGCGACAAATGTCGTTTTGCTCATGGTGAGTGGGAACTTGGAATGCCGAACCACCCTCCACTGGAACACGGTAGAATGGGAGGACCACCAATGCAACAACCCAGAATGGGTGGTGGCTGGAATTTTCCTCCACCACCACCTAATCATGTACCCTCTGCTAGCTTTGGCGCCTCGGCAACTGCAAAGATCAGCGTCGATGCAGCGCTTGCAGGTCCCATAATTGGGAAAAATGGGGTCAACTCAAAGAGTATCTGTCGTATGACAGGTGCAAGGCTTTCTATAAAAGAACACGAGTCGGACTCTAACCTGAAGAACATTGAGTTTGAGGGTACTTTTGATCAGATCAATCAAGCTAGTTCAATGGTGCGCGAGTTGATTGCGAACCTTGGTGATGCCGCTGCCAATAAGCCCACGAGGCACCAGAAATCTTCTGGCTCGGTAATCAACTTTAAGACCAAGCTTTGTGCTAATTTTGAAAAGGGTACTTGTACGTTTAGAGACAAATGCCATTTTGCACATGGCGAAAGTGAATTGCAGAAATGAGGTATGTGAATGGCTGGCCTTGTAGCAGTGAGTTTCTTCTTGGACAAAATTTTCTTTCGTTTTGCTTTGCTTCTCTGTTTGAATCATTTGTTAAATTTGAAAATCGATATCTGATTACTTGTAAGACAAGCAATTTTCATCTAAGCTGCAATGGGGACGAGGTTTGAAGGGTTCTTAATTGTGCTATTGCTCTCCTTTGTCTAGAAATAGAATCCCTTCAATGTGCATTTTGAAACTCATTTTGGATGGATTTGAGAATTTTGTCCTGACAGGAAAAAATGTGCACCAATTAC

Coding sequence (CDS)

ATGGACTTCGACGGTGTTCGCAAGAGGGAGAGAGCTGAAACCGCCTTCTATGGCAATGGCGCCTTCAAGAAGTCCAAATCAGAAATGGACTCTACTGGTTTAGGAAGCAAAACAAGGCCTTGCACAAAGTTTTTCAGCACGTCTGGTTGCCCTTTTGGTGATGGGTGTCATTTTGCACATCATGTTCCTGGTGGATTCAAAGCAATTCCTCAGATGATCAATCCTGCTATTCCCCCTGGCATTAGAAATCCTGTCGGCCCCCCATCGTTTCCAGATGGTGGCCCTCCTCCAGCTGCGAAGACTCGTTTGTGCACGAAATTCAACTCAGCTGAAGGCTGCAGGTTCGGCGACAAATGTCGTTTTGCTCATGGTGAGTGGGAACTTGGAATGCCGAACCACCCTCCACTGGAACACGGTAGAATGGGAGGACCACCAATGCAACAACCCAGAATGGGTGGTGGCTGGAATTTTCCTCCACCACCACCTAATCATGTACCCTCTGCTAGCTTTGGCGCCTCGGCAACTGCAAAGATCAGCGTCGATGCAGCGCTTGCAGGTCCCATAATTGGGAAAAATGGGGTCAACTCAAAGAGTATCTGTCGTATGACAGGTGCAAGGCTTTCTATAAAAGAACACGAGTCGGACTCTAACCTGAAGAACATTGAGTTTGAGGGTACTTTTGATCAGATCAATCAAGCTAGTTCAATGGTGCGCGAGTTGATTGCGAACCTTGGTGATGCCGCTGCCAATAAGCCCACGAGGCACCAGAAATCTTCTGGCTCGGTAATCAACTTTAAGACCAAGCTTTGTGCTAATTTTGAAAAGGGTACTTGTACGTTTAGAGACAAATGCCATTTTGCACATGGCGAAAGTGAATTGCAGAAATGA

Protein sequence

MDFDGVRKRERAETAFYGNGAFKKSKSEMDSTGLGSKTRPCTKFFSTSGCPFGDGCHFAHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVRELIANLGDAAANKPTRHQKSSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQK

Homology

[Close]

BLAST of Sed0014244.1 vs. NCBI nr
Match: XP_022967901.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima])

HSP 1 Score: 484.2 bits (1245), Expect = 8.1e-133
Identity = 244/301 (81.06%), Postives = 260/301 (86.38%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGV KRERAETA  GNGAFKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDPDGVHKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QM +PAI  GIRNPVGPP FPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAILTGIRNPVGPPPFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKI 180
           C FAHGEW+LG PN PP EHG MGGP  QQPRMGGGWN PPP PNH P+ASFGASATAKI
Sbjct: 121 CHFAHGEWDLGRPNPPP-EHGGMGGPLAQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180

Query: 181 SVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVR 240
           SVDA+LAGPIIGKNGVNSK+ICRMTGARLSIK+HESDS+LKNIE EGTFDQIN ASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANLGDAAANKPTRHQK----SSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQ 296
           ELIAN+G A+AN   R Q+     SGS  NFKTKLCANF KGTCTFR++CHFAHGESEL+
Sbjct: 241 ELIANMGTASANDAMRQQQHSQHHSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 300

[Close]

BLAST of Sed0014244.1 vs. NCBI nr
Match: XP_022933588.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata])

HSP 1 Score: 483.8 bits (1244), Expect = 1.1e-132
Identity = 245/301 (81.40%), Postives = 262/301 (87.04%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGVRKRERAETA  GNGAFKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDPDGVRKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QM +PAI PGIRNPV PPSFPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPM-QQPRMGGGWNFPPPPPNHVPSASFGASATAK 180
           C FAHGEW+LG PN PP EHG MGG P+ QQPRMGGGWN PPP PNH P+ASFGASATAK
Sbjct: 121 CHFAHGEWDLGRPNPPP-EHGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAK 180

Query: 181 ISVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMV 240
           ISVDA+LAGPIIGKNGVNSK+ICRMTGARLSIK+HESDS+LKNIE EGTFDQIN ASSMV
Sbjct: 181 ISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMV 240

Query: 241 RELIANLGDAAANKPTRHQK---SSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQ 296
           RELIAN+G A+AN   R Q+   S  S  NFKTKLCANF KGTCTFR++CHFAHGESEL+
Sbjct: 241 RELIANVGAASANNAMRQQQQQHSQHSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 300

[Close]

BLAST of Sed0014244.1 vs. NCBI nr
Match: XP_038880603.1 (zinc finger CCCH domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 483.4 bits (1243), Expect = 1.4e-132
Identity = 245/309 (79.29%), Postives = 262/309 (84.79%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGVRKRER ETA  GNG FKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDLDGVRKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QMI PA+PPGIRNP  P SFPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMIGPALPPGIRNPAPPQSFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKI 180
           C +AHGEWELG PN PP +HG +G  PMQQPRMGGGWN PPPPPNH P+ASFGASATAKI
Sbjct: 121 CYYAHGEWELGRPN-PPQDHGGVG--PMQQPRMGGGWNMPPPPPNHGPAASFGASATAKI 180

Query: 181 SVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVR 240
           SVDA+LAGPIIGKNGVNSK+ICRMTGARLSIKEHESD NLKNIE EGTFDQIN ASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANLGDAAAN---KPTRH---------QKSSGSVINFKTKLCANFEKGTCTFRDKCHF 296
           ELIAN+G A+AN   K  +H         Q+SSGS  NFKTKLCANF KGTCTFR++CHF
Sbjct: 241 ELIANVGAASANNAMKQHQHQQHHHASGMQQSSGSANNFKTKLCANFTKGTCTFRERCHF 300

[Close]

BLAST of Sed0014244.1 vs. NCBI nr
Match: XP_023531374.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.3 bits (1240), Expect = 3.1e-132
Identity = 244/300 (81.33%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGVRKRERAETA  GNGAFKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDPDGVRKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QM +PAI PGIRNPV PPSFPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPM-QQPRMGGGWNFPPPPPNHVPSASFGASATAK 180
           C FAHGEW+LG PN PP EHG MGG P+ QQPRMGGGWN PPP PNH P+ASFGASATAK
Sbjct: 121 CHFAHGEWDLGRPNPPP-EHGGMGGGPLAQQPRMGGGWNVPPPQPNHGPAASFGASATAK 180

Query: 181 ISVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMV 240
           ISVDA+LAGPIIGKNGVNSK+ICRMTGARLSIK+HESDS+LKNIE EGTFDQIN ASSMV
Sbjct: 181 ISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMV 240

Query: 241 RELIANLGDAAANKPTRHQK--SSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQK 296
           RELIAN+G A+AN   R Q+  S  S  NFKTKLCANF KG CTFR++CHFAHGESEL+K
Sbjct: 241 RELIANVGAASANNAMRQQQQHSQHSANNFKTKLCANFAKGNCTFRERCHFAHGESELRK 299

[Close]

BLAST of Sed0014244.1 vs. NCBI nr
Match: KAG6588165.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 481.1 bits (1237), Expect = 6.9e-132
Identity = 244/301 (81.06%), Postives = 262/301 (87.04%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGVRKRERAETA  GNGAFKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDPDGVRKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QM +PAI PGIRNPV PPSFPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPALKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPM-QQPRMGGGWNFPPPPPNHVPSASFGASATAK 180
           C FAHGEW+LG PN PP E+G MGG P+ QQPRMGGGWN PPP PNH P+ASFGASATAK
Sbjct: 121 CHFAHGEWDLGRPNPPP-EYGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAK 180

Query: 181 ISVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMV 240
           ISVDA+LAGPIIGKNGVNSK+ICRMTGARLSIK+HESDS+LKNIE EGTFDQIN ASSMV
Sbjct: 181 ISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMV 240

Query: 241 RELIANLGDAAANKPTRHQK---SSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQ 296
           RELIAN+G A+AN   R Q+   S  S  NFKTKLCANF KGTCTFR++CHFAHGESEL+
Sbjct: 241 RELIANVGAASANNAMRQQQQQHSQHSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 300

[Close]

BLAST of Sed0014244.1 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.7e-83
Identity = 175/300 (58.33%), Postives = 211/300 (70.33%), Query Frame = 0


Query: 5   GVRKRERAETAFYGNGAFKKSKSEMDSTGLGSKTRPCTKFFSTSGCPFGDGCHFAHHVPG 64
           G RKR + + A  G G  +  +SE   TG+GSK++PCTKFFSTSGCPFG+GCHF HH PG
Sbjct: 4   GGRKRGKPDGA-NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 63

Query: 65  GFKAIPQMIN---PAI-PPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCR 124
           G++A+ +M N   PAI PP  R P+G  + PDG P P  KTRLC K+N+AEGC++GDKC 
Sbjct: 64  GYQAVAKMTNLGGPAIAPPPGRMPMG-NAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKCH 123

Query: 125 FAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPP-PPPNHVPSASFGASATAKIS 184
           FAHGE ELG    P L    M  PP   PR  G +  PP P P     ASFGASATAKIS
Sbjct: 124 FAHGERELG---KPMLMDSSM--PPPMGPRPTGHFAPPPMPSPAMSTPASFGASATAKIS 183

Query: 185 VDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVRE 244
           VDA+LAG IIG+ GVN+K I R+TGA+L+I++HESD+NLKNIE EGTFDQI  AS+MVRE
Sbjct: 184 VDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRE 243

Query: 245 LIANLGDAA---ANKPT-RHQKSSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQK 296
           LI ++G  A     KP     +  G   NFKTKLC NF KG+CTF D+CHFAHGE+EL+K
Sbjct: 244 LIVSIGGGAPPQGKKPVGGSHRGGGPGSNFKTKLCENFTKGSCTFGDRCHFAHGENELRK 296

[Close]

BLAST of Sed0014244.1 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.0e-81
Identity = 168/303 (55.45%), Postives = 206/303 (67.99%), Query Frame = 0


Query: 7   RKRERAETAFYGNGAFKKSK-SEMDSTGLGSKTRPCTKFFSTSGCPFGDGCHFAHHVPGG 66
           RKR R +TA  G    K+S+ +E   TGL SK +PCTKFFST GCPFG+GCHF+H VPGG
Sbjct: 8   RKRSRPDTANGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPGG 67

Query: 67  FKAIPQMI---NPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCRFA 126
           ++A+ + +   NPA+P   R P+   +  +  P  + KTR+CTK+N+AEGC+FGDKC FA
Sbjct: 68  YQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHFA 127

Query: 127 HGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISVDA 186
           HGE ELG P +  + H     PPM   R GG    PPP     P+ +FGASATAKISVDA
Sbjct: 128 HGERELGKPAY--MSHESAMAPPM-GGRYGGRPEPPPPAAMGPPAGNFGASATAKISVDA 187

Query: 187 ALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVRELIA 246
           +LAG IIGK GVN+K ICR+TG +LSI++HESDSNLKNIE EG FDQI QAS+MV ELIA
Sbjct: 188 SLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGELIA 247

Query: 247 NL----------GDAAANKPTRHQKSSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESE 296
            +          G AA   P   +   G   N+KTKLC NF KGTCTF D+CHFAHGE+E
Sbjct: 248 TISPSTPAKKPAGSAAGAAPA-GRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGENE 306

[Close]

BLAST of Sed0014244.1 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-76
Identity = 161/292 (55.14%), Postives = 198/292 (67.81%), Query Frame = 0


Query: 19  NGAFKKSK-SEMDSTGLGSKTRPCTKFFSTSGCPFGDGCHFAHHVPGGFKAIPQMIN--- 78
           NGA K+++ SE    G+GSK +PCTKFFSTSGCPFG  CHF H+ PGG++A  +M +   
Sbjct: 15  NGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGG 74

Query: 79  --PAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCRFAHGEWELGMP- 138
              A PPG R P+GP + P+G P  + KTR+C K+N+AEGC++G KC FAHGE ELG P 
Sbjct: 75  TAVAAPPG-RMPLGPGA-PNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPM 134

Query: 139 ------NHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISVDAALA 198
                  HP      MG  P + P        P P P+ VP ++FGASATAKISVDA+LA
Sbjct: 135 LLDNSMPHP------MGSMPFEAP--------PMPGPDIVPPSTFGASATAKISVDASLA 194

Query: 199 GPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVRELIANLG 258
           G IIGK G N+K I RMTGA+L+I+++ES+ NLKNIE EGTFDQI  AS+MV ELI  + 
Sbjct: 195 GGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRIS 254

Query: 259 DAA--ANKPTRHQKSSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQK 296
             A  A  P R   + G   NFKTKLC NF KG+CTF D+CHFAHGESEL+K
Sbjct: 255 GNAPPAKNPGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]

BLAST of Sed0014244.1 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.7e-56
Identity = 137/304 (45.07%), Postives = 166/304 (54.61%), Query Frame = 0


Query: 7   RKRERAETAFYGN--GAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHFAHHV 66
           RKR R E   + +  G +KKSK EM+  STGLGSK++PCTKFFSTSGCPFG+ CHF H+V
Sbjct: 4   RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63

Query: 67  PGGFKAIPQMIN--PAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCR 126
           PGG+ A+ QM N  P IP   RN  G                      S  G RF     
Sbjct: 64  PGGYNAVSQMTNMGPPIPQVSRNMQG----------------------SGNGGRFS---- 123

Query: 127 FAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISV 186
              G  E G                                P HV  ++FG SATA+ SV
Sbjct: 124 ---GRGESG--------------------------------PGHV--SNFGDSATARFSV 183

Query: 187 DAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVREL 246
           DA+LAG IIGK GV+SK ICR TG +LSI++HE D NLKNI  EGT +QI++AS+MV++L
Sbjct: 184 DASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDL 243

Query: 247 IANLGDAAANKPTRHQKSSGSV---------INFKTKLCANFEKGTCTFRDKCHFAHGES 296
           I  L  AA   P       G +          NFKTK+C  F KG CTF D+CHFAHGE+
Sbjct: 244 IGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEA 244

[Close]

BLAST of Sed0014244.1 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.0e-54
Identity = 142/298 (47.65%), Postives = 166/298 (55.70%), Query Frame = 0


Query: 7   RKRERAETA--FYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHFAHHV 66
           RKR R E A     NG FK+SK EM+  STGLGSK++PCTKFFSTSGCPFGD CHF H+V
Sbjct: 4   RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63

Query: 67  PGGFKAIPQMIN--PAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCR 126
           PGG+ A  QM N  P +    RN  G      GGP                G RF  +  
Sbjct: 64  PGGYNAAAQMTNLRPPVSQVSRNMQG-----SGGP----------------GGRFSGR-- 123

Query: 127 FAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISV 186
                                 G P      G G           P + FGAS T+KISV
Sbjct: 124 ----------------------GDP------GSG-----------PVSIFGAS-TSKISV 183

Query: 187 DAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVREL 246
           DA+LAG IIGK G++SK ICR TGA+LSIK+HE D NLK IE EGTF+QIN AS MVREL
Sbjct: 184 DASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVREL 236

Query: 247 IANLGDAAANKPTRHQKSSGSV---INFKTKLCANFEKGTCTFRDKCHFAHGESELQK 296
           I  LG  +  KP       G      N+KTK+C  + KG CT+ D+CHFAHGESEL++
Sbjct: 244 IGRLG--SVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRR 236

[Close]

BLAST of Sed0014244.1 vs. ExPASy TrEMBL
Match: A0A6J1HTD4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111467273 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.9e-133
Identity = 244/301 (81.06%), Postives = 260/301 (86.38%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGV KRERAETA  GNGAFKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDPDGVHKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QM +PAI  GIRNPVGPP FPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAILTGIRNPVGPPPFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKI 180
           C FAHGEW+LG PN PP EHG MGGP  QQPRMGGGWN PPP PNH P+ASFGASATAKI
Sbjct: 121 CHFAHGEWDLGRPNPPP-EHGGMGGPLAQQPRMGGGWNVPPPQPNHGPAASFGASATAKI 180

Query: 181 SVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVR 240
           SVDA+LAGPIIGKNGVNSK+ICRMTGARLSIK+HESDS+LKNIE EGTFDQIN ASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANLGDAAANKPTRHQK----SSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQ 296
           ELIAN+G A+AN   R Q+     SGS  NFKTKLCANF KGTCTFR++CHFAHGESEL+
Sbjct: 241 ELIANMGTASANDAMRQQQHSQHHSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 300

[Close]

BLAST of Sed0014244.1 vs. ExPASy TrEMBL
Match: A0A6J1F582 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111440970 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 5.1e-133
Identity = 245/301 (81.40%), Postives = 262/301 (87.04%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DGVRKRERAETA  GNGAFKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDPDGVRKRERAETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGGFKAI QM +PAI PGIRNPV PPSFPDG  PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMNSPAISPGIRNPVAPPSFPDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPM-QQPRMGGGWNFPPPPPNHVPSASFGASATAK 180
           C FAHGEW+LG PN PP EHG MGG P+ QQPRMGGGWN PPP PNH P+ASFGASATAK
Sbjct: 121 CHFAHGEWDLGRPNPPP-EHGGMGGGPLGQQPRMGGGWNVPPPQPNHGPAASFGASATAK 180

Query: 181 ISVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMV 240
           ISVDA+LAGPIIGKNGVNSK+ICRMTGARLSIK+HESDS+LKNIE EGTFDQIN ASSMV
Sbjct: 181 ISVDASLAGPIIGKNGVNSKNICRMTGARLSIKDHESDSSLKNIELEGTFDQINLASSMV 240

Query: 241 RELIANLGDAAANKPTRHQK---SSGSVINFKTKLCANFEKGTCTFRDKCHFAHGESELQ 296
           RELIAN+G A+AN   R Q+   S  S  NFKTKLCANF KGTCTFR++CHFAHGESEL+
Sbjct: 241 RELIANVGAASANNAMRQQQQQHSQHSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 300

[Close]

BLAST of Sed0014244.1 vs. ExPASy TrEMBL
Match: A0A5A7TFZ9 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00430 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.3e-131
Identity = 241/306 (78.76%), Postives = 260/306 (84.97%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DG RKRER ETA  GNG FKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGG K+I QMI+PA+PPGIRNP  P SFPD G PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPD-GVPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKI 180
           C +AHGEWELG PN PP +HG MG  PMQQPRMGGGWN PPPPPNH P+ASFGASATAKI
Sbjct: 121 CYYAHGEWELGRPN-PPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKI 180

Query: 181 SVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVR 240
           SVDA+LAGPIIGKNG+NSK+ICRMTGARLSIKEHESD NLKNIE EGTFDQIN ASSMVR
Sbjct: 181 SVDASLAGPIIGKNGINSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANLGDAAAN---KPTRH------QKSSGSVINFKTKLCANFEKGTCTFRDKCHFAHG 296
           ELIAN+G A+AN   K  +H      Q+SSGS  NFKTKLCANF KG CTFR++CHFAHG
Sbjct: 241 ELIANVGAASANNAMKQHQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAHG 300

[Close]

BLAST of Sed0014244.1 vs. ExPASy TrEMBL
Match: A0A0A0M2L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605650 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.3e-131
Identity = 240/307 (78.18%), Postives = 258/307 (84.04%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DG RKRER ETA  GNG FKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGG K+I QMI+PA+PPGIRNP  P SFPD G PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPD-GVPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKI 180
           C +AHGEWELG PN PP +HG MG  PMQQPRMGGGWN PPPPPNH P+ASFGASATAKI
Sbjct: 121 CYYAHGEWELGRPN-PPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKI 180

Query: 181 SVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVR 240
           SVDA+LAGPIIGKNGVNSK+ICRMTGARLSIKEHESD NLKNIE EGTFDQIN ASSMVR
Sbjct: 181 SVDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANLGDAAANKPTRH----------QKSSGSVINFKTKLCANFEKGTCTFRDKCHFAH 296
           ELIAN+G A+AN   +           Q+SSGS  NFKTKLCANF KG CTFR++CHFAH
Sbjct: 241 ELIANVGAASANNAMKQHQQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAH 300

[Close]

BLAST of Sed0014244.1 vs. ExPASy TrEMBL
Match: A0A5D3CR11 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00090 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 241/308 (78.25%), Postives = 260/308 (84.42%), Query Frame = 0


Query: 1   MDFDGVRKRERAETAFYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHF 60
           MD DG RKRER ETA  GNG FKKSK EMD  STGLGSK+RPCTKFFSTSGCPFG+GCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDK 120
           AH+VPGG K+I QMI+PA+PPGIRNP  P SFPD G PPA KTRLC KFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPD-GVPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CRFAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKI 180
           C +AHGEWELG PN PP +HG MG  PMQQPRMGGGWN PPPPPNH P+ASFGASATAKI
Sbjct: 121 CYYAHGEWELGRPN-PPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKI 180

Query: 181 SVDAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVR 240
           SVDA+LAGPIIGKNG+NSK+ICRMTGARLSIKEHESD NLKNIE EGTFDQIN ASSMVR
Sbjct: 181 SVDASLAGPIIGKNGINSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVR 240

Query: 241 ELIANLGDAAAN---KPTRH--------QKSSGSVINFKTKLCANFEKGTCTFRDKCHFA 296
           ELIAN+G A+AN   K  +H        Q+SSGS  NFKTKLCANF KG CTFR++CHFA
Sbjct: 241 ELIANVGAASANNAMKQHQHQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFA 300

[Close]

BLAST of Sed0014244.1 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 219.9 bits (559), Expect = 2.7e-57
Identity = 137/304 (45.07%), Postives = 166/304 (54.61%), Query Frame = 0


Query: 7   RKRERAETAFYGN--GAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHFAHHV 66
           RKR R E   + +  G +KKSK EM+  STGLGSK++PCTKFFSTSGCPFG+ CHF H+V
Sbjct: 4   RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63

Query: 67  PGGFKAIPQMIN--PAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCR 126
           PGG+ A+ QM N  P IP   RN  G                      S  G RF     
Sbjct: 64  PGGYNAVSQMTNMGPPIPQVSRNMQG----------------------SGNGGRFS---- 123

Query: 127 FAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISV 186
              G  E G                                P HV  ++FG SATA+ SV
Sbjct: 124 ---GRGESG--------------------------------PGHV--SNFGDSATARFSV 183

Query: 187 DAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVREL 246
           DA+LAG IIGK GV+SK ICR TG +LSI++HE D NLKNI  EGT +QI++AS+MV++L
Sbjct: 184 DASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDL 243

Query: 247 IANLGDAAANKPTRHQKSSGSV---------INFKTKLCANFEKGTCTFRDKCHFAHGES 296
           I  L  AA   P       G +          NFKTK+C  F KG CTF D+CHFAHGE+
Sbjct: 244 IGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEA 244

[Close]

BLAST of Sed0014244.1 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 212.6 bits (540), Expect = 4.2e-55
Identity = 142/298 (47.65%), Postives = 166/298 (55.70%), Query Frame = 0


Query: 7   RKRERAETA--FYGNGAFKKSKSEMD--STGLGSKTRPCTKFFSTSGCPFGDGCHFAHHV 66
           RKR R E A     NG FK+SK EM+  STGLGSK++PCTKFFSTSGCPFGD CHF H+V
Sbjct: 4   RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63

Query: 67  PGGFKAIPQMIN--PAIPPGIRNPVGPPSFPDGGPPPAAKTRLCTKFNSAEGCRFGDKCR 126
           PGG+ A  QM N  P +    RN  G      GGP                G RF  +  
Sbjct: 64  PGGYNAAAQMTNLRPPVSQVSRNMQG-----SGGP----------------GGRFSGR-- 123

Query: 127 FAHGEWELGMPNHPPLEHGRMGGPPMQQPRMGGGWNFPPPPPNHVPSASFGASATAKISV 186
                                 G P      G G           P + FGAS T+KISV
Sbjct: 124 ----------------------GDP------GSG-----------PVSIFGAS-TSKISV 183

Query: 187 DAALAGPIIGKNGVNSKSICRMTGARLSIKEHESDSNLKNIEFEGTFDQINQASSMVREL 246
           DA+LAG IIGK G++SK ICR TGA+LSIK+HE D NLK IE EGTF+QIN AS MVREL
Sbjct: 184 DASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVREL 236

Query: 247 IANLGDAAANKPTRHQKSSGSV---INFKTKLCANFEKGTCTFRDKCHFAHGESELQK 296
           I  LG  +  KP       G      N+KTK+C  + KG CT+ D+CHFAHGESEL++
Sbjct: 244 IGRLG--SVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRR 236

[Close]

BLAST of Sed0014244.1 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 45/145 (31.03%), Postives = 58/145 (40.00%), Query Frame = 0


Query: 7   RKRERAETAFYGNGAFKKSKSEMDSTGLGSKTRPCTKFFSTSGCPFGDGCHFAHH----- 66
           R+RER   A   N  ++      D   +  + + C KF     CP+GD C+F H      
Sbjct: 161 RERERPSLAPVVNNNWE------DDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKF 220

Query: 67  ------------VPGGFKAIPQMINPAIPPGIRNPVG----PPSFPDGGPPPAA--KTRL 126
                       +  G  A  Q  + A      N  G    P    +GG       KTRL
Sbjct: 221 REDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRL 280

Query: 127 CTKFNSAEGCRFGDKCRFAHGEWEL 129
           C KF+    C FGDKC FAHG+ EL
Sbjct: 281 CMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]

BLAST of Sed0014244.1 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 37/127 (29.13%), Postives = 48/127 (37.80%), Query Frame = 0


Query: 27  SEMDSTGLGSKTRPCTKFFSTSGCPFGDGCHFAH-HVPGGFKAIPQMINP-AIPPGIRNP 86
           S    +G   K R C KF++  GCP+G+ C F H       +++   + P     G    
Sbjct: 164 SSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGG 223

Query: 87  VGPPSFPDGG-----------------------PPPAAKTRLCTKFNSAEGCRFGDKCRF 129
            G  S   GG                        P   KTR+C K+     C FG KC F
Sbjct: 224 SGGGSVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHF 283

[Close]

BLAST of Sed0014244.1 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04
Identity = 25/88 (28.41%), Postives = 36/88 (40.91%), Query Frame = 0


Query: 36  SKTRPCTKFFSTSGCPFGDGCHFAHHVPGGFKAIPQMINPAIPPGIRNPVGPPSFPDGGP 95
           +KT  C K+  T  CP+GD C FAH +              + P IR+            
Sbjct: 223 TKTELCNKWQETGTCPYGDHCQFAHGI------------KELRPVIRH------------ 282

Query: 96  PPAAKTRLCTKFNSAEGCRFGDKCRFAH 124
            P  KT +C    + + C +G +C F H
Sbjct: 283 -PRYKTEVCRMVLAGDNCPYGHRCHFRH 285

The following BLAST results are available for this feature:

BLAST of Sed0014244.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967901.1	8.1e-133	81.06	zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima]	[more]
XP_022933588.1	1.1e-132	81.40	zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata]	[more]
XP_038880603.1	1.4e-132	79.29	zinc finger CCCH domain-containing protein 14-like [Benincasa hispida]	[more]
XP_023531374.1	3.1e-132	81.33	zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo]	[more]
KAG6588165.1	6.9e-132	81.06	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]

BLAST of Sed0014244.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	2.7e-83	58.33	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	2.0e-81	55.45	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	1.1e-76	55.14	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C7C3	3.7e-56	45.07	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FG30	6.0e-54	47.65	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Sed0014244.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTD4	3.9e-133	81.06	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1F582	5.1e-133	81.40	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7TFZ9	6.3e-131	78.76	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0M2L9	6.3e-131	78.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605650 PE=4 SV=1	[more]
A0A5D3CR11	1.1e-130	78.25	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Sed0014244.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12130.1	2.7e-57	45.07	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT5G06770.1	4.2e-55	47.65	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G19360.1	1.4e-05	31.03	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	1.8e-05	29.13	Zinc finger (CCCH-type) family protein	[more]
AT1G68200.1	1.5e-04	28.41	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 264..290 e-value: 3.2E-6 score: 36.7 coord: 35..62 e-value: 0.092 score: 21.9 coord: 98..125 e-value: 0.0022 score: 27.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 265..290 e-value: 9.7E-6 score: 25.4 coord: 37..61 e-value: 1.8E-5 score: 24.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 264..291 score: 15.365827
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 98..126 score: 14.295469
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 35..63 score: 13.178166
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 172..242 e-value: 1.9E-10 score: 50.7
None	No IPR available	GENE3D	4.10.1000.10		coord: 34..63 e-value: 1.5E-6 score: 29.5 coord: 262..295 e-value: 4.4E-12 score: 47.2 coord: 95..130 e-value: 5.5E-11 score: 43.7
None	No IPR available	PANTHER	PTHR12547:SF124	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 52	coord: 4..295
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 4..295
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 173..237 score: 13.334265
None	No IPR available	CDD	cd00105	KH-I	coord: 175..237 e-value: 1.72493E-11 score: 56.7995
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 176..239 e-value: 8.8E-8 score: 31.9
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 169..261 e-value: 8.3E-14 score: 53.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 168..243
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 102..124 e-value: 4.3E-7 score: 29.6
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 97..130
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 263..294
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 36..62

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0014244	Sed0014244	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014244.1-three_prime_utr	Sed0014244.1-three_prime_utr-LG08:12446284..12446576	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014244.1-exon	Sed0014244.1-exon-LG08:12446284..12447327	exon
Sed0014244.1-exon	Sed0014244.1-exon-LG08:12448589..12448643	exon
Sed0014244.1-exon	Sed0014244.1-exon-LG08:12449555..12449795	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014244.1-cds	Sed0014244.1-cds-LG08:12446577..12447327	CDS
Sed0014244.1-cds	Sed0014244.1-cds-LG08:12448589..12448643	CDS
Sed0014244.1-cds	Sed0014244.1-cds-LG08:12449555..12449636	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0014244.1-five_prime_utr	Sed0014244.1-five_prime_utr-LG08:12449637..12449795	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0014244.1	Sed0014244.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003729	mRNA binding