Sed0013666.2 (mRNA) Chayote v1

Overview


Name	Sed0013666.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Peptidylprolyl isomerase
Location	LG06: 8275068 .. 8279086 (+)
Sequence length	1404
RNA-Seq Expression	Sed0013666.2
Synteny	Sed0013666.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAATTGATATTGAAACCCTATTTGAAATGAAGTAGATCCTTTGAAGCACACAGCAGTAACCCTAAAGAAAGAAGAAAGAGAGCTTCGTTTGAGAGAGGAACAATGGGAGTGGAGAAGGAGGTGCTGCGACCCGGAACCGGACCCAAGCCCACCGCCGGCCAGTTGGTCACCGTCCACTGCACCGGTTTCGGTCAGTTCCTCTTCAACCAAACCCTAATCTTAATCCCTTTCTAAATGCATCTGAACACAATGTTTGCCATTCTAATCGTCTTTCTTTTCCTTCGTACTTTGATCCGGATCGAGGTTTCTTAGCCCCGTTTGATAACCATTTGGTTTTTGGTTCTTAAAATTTAAACGTATTTTTAGTCAGATTTACTAAAATGTGCTTCTGTATGTGAATATTAGTCAAATTCCAAAAATAAAAACGAGTTTTCGATTTTTTTTTTTTTTTTTTGTTTCCGAATTTTTCTTTGGTTTCTAGAGATATAGGTAAATTGTAGATATCCAAGGAAGAAAAAATACAGGGTAAGATCATTTTCGTAGCTTAAATTTCAAAAATAAAAAACTAAAAACCAATTATAGATATAAGGATGAATCATGAGATTCAATTCCGACCGATGTCATAGTGGTAATGCGATGGTTCATGCTTTTTTATATTCATACTGCTTAATCAAGATGAGTATTTATTTTCTTATTTGACAACAATCATAAAGTATTAAACCTTGCTCTAACATTGAACTGAAGTTTAGCCTCTAGTCATTGACCTTTTTTGCATTTATAGCTACTTTTACATTTAGAGTACTGAAAATTGATGTGGGTATGTAAGACTTAGATAGTTGAGCCCATGACTTGGTGTTTACTAAGTGATTTCGGATGTGGGTGTTTCCTCCTCTGCCATCTCCAAGTATTTTTTTGTTCTCAAAAATGATAAACGAAATGGTTATCAAACGGGGCCTAAGTGATTTCAGATGTGGTTGTTTCCTCCTCTGGCATCTCCCAAGTATTTTTTGTTTTTTCTCGTTTTGGTCACCCTTTAATTTTCTCTGCAGGAAAGAATGGCAATCTGTCCGAGAAGTTTTGGAGGTAAGTTGTTTTCCTGTCTCTTTGTATCAAATGGGCATGCTTATGTACATGAAGATCTGTTTATTGATGCATAATTTTCTCTTATTTAGCACAAAGGACCCTGGACAGAAGCCTTTCCAATTTAAAATCGGCCAAGGCTCAGTTATCAAAGGTACTTGTCCTCTTATTCCTTCTAGGACTAGGAGTTTCTTGACAATACCAACCATCTTTGCATTTAATTATCTATCAAACTAGTCCTTGAACTATTGTTTTTTCTTCCCCAATGTTGAATATTTATATTTTGACATTCATCTCTGAAAAGAGTATGGACGAAATTGAGAATTGATATATCATATATACATTTGGGACATCTTTTAAAGCTTAGCTTATTCATTGAAACATAAGATTGATTCGGGTGGTCTAAGGTTGGAAGAACTACGCTTATGATATTGTGGATGCTAGGTCACTCTTAGTCTTCTCTGCAAAAAGCTAGTAGGTGTTTTGTGTGGACAGTTTAACACCCACTTGACTGGACGTAAGTCATGCAACCTTTTCAATTGGGAAGAGGACAAAATTGAAAACTAAAATGAGTAATTTAGGCCCCGTTTGACAACCATTTCGTTTTTCGTTTTTCGTTTTTTGTTTCTAGTTTTTCATTTTTAGATTTTGGTTTTTTGTTTTAAAAAATAAAAATCGTATATGTTTGATAACTCATTTTAGTTTTCTGTTTTTGAAAATTAAAAACAAAAAAAACATGTTTGATAACTGTTTTTTGTTTTCAAATTTCACATTTTGTTTGGATTTTTTTAGTTTTTTACTCTTTATTCTTGATTTTTCATACTTTTTTTAAAACAAAAACTTGTTTTTAAAAGATATTTTTTTTAGTTTTTAGATTTCCTTTAATATTTTAAAAATGTTTTTAAAATTTTAAAAACTAAAACTAAAATTAGTTATCAGACAAACCTGTTTTTAAAAAGTTAAAAACAAAAATAGAAAACTAAAAACGAAATGGTTATCGAACTAAAATAGTAGAGTAGTTATCGTTCGGGCCAATATAAGAGTTGAACAACAAATAAAAAAGATAAAGTGCATTGCATGATCAATTTTAGGCACTTTTTCATTGGTGCAACAAAAGGCTTTTGTTATATTGCATTTTTTCTCCATTGCCGTATCTATAGTTGATCTTTTATTTATTTTGTTCTGCTTTCCAATTAATGTACTTGCAGCTTCACATGGCTTCTTTGTTTCATTTGTGTAACGAAAAGTTTTTATTTTTGTTTTCATTATTCTTTTCATTATTCTTTCTCCATTGCCATGATGTTTTTTTATATCTCGATTGCCAATTTGATAGTTTGACTTTTATTTATTTCGTTCTGTTTTGCAACCGCTCAGTAGTCAGGACACTTTTTAAAAGTCCGTTTACTTTTTTTTCTTTTATCCAAAATGTGTTTTATGTTTCATGTTACCAACATTTAAAGCATATTGGATGCAATAAAGTCTTTGGCATGATAGTCACATAAAAAAGGGATCCTTGATGCAGGGATGACTGAGCAGAAAACTGTGTTAAAAATTTGCTCTTGCTTCTTGAAAAAAAAAAGTTATTTATCCATTAAAACGATGCTTGCTCATTTAGTGTCATCTGCAGGATTTATTGGCCATTGCAATGTTTGTTTTGAATTTGGATTTGATTCGTTTCTTTGATTGAATTTATAGGATGGGATGAAGGTGTGCTTGGCATGCAAGTGGGAGAAGTTGCTCGTCTCAGGGTAAAATATTTCTTTCCGTTTCCCTGCTTTCAAACACACTCTTAATTGCAACCATAGTTCATAACCATTATTCTATTTATGTGTTTATACAGCTAAAATTGTGATGGATGCCTATTTTGGTTTTCATTTCACAATTTGTTGCCTATGGTTTCCCTTCGTTCATCAAGACGTTTCAATTTCTGTATTCTTTGGCATAAGATTTCATGTCCACTTCTAAACCTGCAGTGTAATTATACATCAATCTCTTGTGATGGATAATTCAAGACTCCCTAAACCAAACATGTAATTTCAAGTTATATGGCAGTAGCCATTTTCCTTCCCATCCCTGATACACCGAGAGTGTCAGCCTCCAAATCAGCCAATAGAATACTGTTTTTATTATTAACGTATTTTTTTAACCATCATAGAGTGACTTAGTGGTCAAAGAGGATCTCGGGGATCCAAGAGATTATGTTTTTGCACCTTTCTAGGATATAATTTCCTACTACTCATCTGGACATCCAAATGCTGTAAGGTTAGATAGTATGTCTCATAAGAATGGTTGAACTCTACATAAACTAGTGTGAACACTCATTGACATAAAAAAAAACATATGTTTTATGATCTAACGCGTATTTTTCTATGTTGAATGATTGTCCAGTGCTCTCCCGACTATGCTTATGGCTCTGGTGGGTTCCCTGCATGGGGCATACAACCTAATTCAGTCTTGGTCTTTGAGATTGAAGTTCTGAATGCTCAGTAAGACAGTGGTTTCTTTCAAGTCTATCGACACTGCAAATGTAGTTTGTTATGAACAACTTTGCTATCGGCTGCGTTTTCGCTATATGTAATTGTTATCTATTCGACCTTGGTACGTATGTTTAATTTCGGGTAAGTTCTGAATCTCTTGGTTCCCTAGTATGCTTTAATGGCTGTACTTTCCTTTCCACATGTTTTGAGTGGAAAATTTTCGCTCAGACTATAGTTTTCTTTAAAAATACTTTCTTTTTTTATCCGTTTAGTTATTAATAAGTTGGAATTTAGTCTAATTGTACAAGGCCTCATCCTTAGTCTTAAGCTATGCCATTCTAAGATGCTAAATGGAAGAATCTTCTTAACGTCCATTAGATCGAACTGCCAAATGAGAAAAATGGAGTGTTCATTGGGCTAAATGTAATCTTTTTTGTAAGATTTTGTTTTTGGAAGGGAG

mRNA sequence

GTAAATTGATATTGAAACCCTATTTGAAATGAAGTAGATCCTTTGAAGCACACAGCAGTAACCCTAAAGAAAGAAGAAAGAGAGCTTCGTTTGAGAGAGGAACAATGGGAGTGGAGAAGGAGGTGCTGCGACCCGGAACCGGACCCAAGCCCACCGCCGGCCAGTTGGTCACCGTCCACTGCACCGGTTTCGGAAAGAATGGCAATCTGTCCGAGAAGTTTTGGAGCACAAAGGACCCTGGACAGAAGCCTTTCCAATTTAAAATCGGCCAAGGCTCAGTTATCAAAGGATGGGATGAAGGTGTGCTTGGCATGCAAGTGGGAGAAGTTGCTCGTCTCAGGGTAAAATATTTCTTTCCGTTTCCCTGCTTTCAAACACACTCTTAATTGCAACCATAGTTCATAACCATTATTCTATTTATGTGTTTATACAGCTAAAATTGTGATGGATGCCTATTTTGGTTTTCATTTCACAATTTGTTGCCTATGGTTTCCCTTCGTTCATCAAGACGTTTCAATTTCTGTATTCTTTGGCATAAGATTTCATGTCCACTTCTAAACCTGCAGTGTAATTATACATCAATCTCTTGTGATGGATAATTCAAGACTCCCTAAACCAAACATGTAATTTCAAGTTATATGGCAGTAGCCATTTTCCTTCCCATCCCTGATACACCGAGAGTGTCAGCCTCCAAATCAGCCAATAGAATACTGTTTTTATTATTAACGTATTTTTTTAACCATCATAGAGTGACTTAGTGGTCAAAGAGGATCTCGGGGATCCAAGAGATTATGTTTTTGCACCTTTCTAGGATATAATTTCCTACTACTCATCTGGACATCCAAATGCTGTAAGTGCTCTCCCGACTATGCTTATGGCTCTGGTGGGTTCCCTGCATGGGGCATACAACCTAATTCAGTCTTGGTCTTTGAGATTGAAGTTCTGAATGCTCAGTAAGACAGTGGTTTCTTTCAAGTCTATCGACACTGCAAATGTAGTTTGTTATGAACAACTTTGCTATCGGCTGCGTTTTCGCTATATGTAATTGTTATCTATTCGACCTTGGTACGTATGTTTAATTTCGGGTAAGTTCTGAATCTCTTGGTTCCCTAGTATGCTTTAATGGCTGTACTTTCCTTTCCACATGTTTTGAGTGGAAAATTTTCGCTCAGACTATAGTTTTCTTTAAAAATACTTTCTTTTTTTATCCGTTTAGTTATTAATAAGTTGGAATTTAGTCTAATTGTACAAGGCCTCATCCTTAGTCTTAAGCTATGCCATTCTAAGATGCTAAATGGAAGAATCTTCTTAACGTCCATTAGATCGAACTGCCAAATGAGAAAAATGGAGTGTTCATTGGGCTAAATGTAATCTTTTTTGTAAGATTTTGTTTTTGGAAGGGAG

Coding sequence (CDS)

ATGGGAGTGGAGAAGGAGGTGCTGCGACCCGGAACCGGACCCAAGCCCACCGCCGGCCAGTTGGTCACCGTCCACTGCACCGGTTTCGGAAAGAATGGCAATCTGTCCGAGAAGTTTTGGAGCACAAAGGACCCTGGACAGAAGCCTTTCCAATTTAAAATCGGCCAAGGCTCAGTTATCAAAGGATGGGATGAAGGTGTGCTTGGCATGCAAGTGGGAGAAGTTGCTCGTCTCAGGGTAAAATATTTCTTTCCGTTTCCCTGCTTTCAAACACACTCTTAA

Protein sequence

MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVIKGWDEGVLGMQVGEVARLRVKYFFPFPCFQTHS

Homology

[Close]

BLAST of Sed0013666.2 vs. NCBI nr
Match: XP_038887405.1 (peptidyl-prolyl cis-trans isomerase FKBP12 [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37
Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKEVLR GTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQGSVI
Sbjct: 1  MGVEKEVLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQVGEVARLR
Sbjct: 61 KGWDEGVLGMQVGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. NCBI nr
Match: XP_008455137.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo] >KAA0031440.1 peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo var. makuwa] >TYK06891.1 peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo var. makuwa])

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKE+LR GTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQG+VI
Sbjct: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQVGEVARLR
Sbjct: 61 KGWDEGVLGMQVGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. NCBI nr
Match: XP_004136893.1 (peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis sativus] >KGN43763.1 hypothetical protein Csa_017352 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 2.2e-36
Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MG+EKEVLR GTGPKP AGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQG+VI
Sbjct: 1  MGIEKEVLRSGTGPKPAAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQVGEVARLR
Sbjct: 61 KGWDEGVLGMQVGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. NCBI nr
Match: XP_022953008.1 (peptidyl-prolyl cis-trans isomerase FKBP12 [Cucurbita moschata] >XP_022971937.1 peptidyl-prolyl cis-trans isomerase FKBP12 [Cucurbita maxima] >XP_023511573.1 peptidyl-prolyl cis-trans isomerase FKBP12 [Cucurbita pepo subsp. pepo] >KAG6571863.1 Peptidyl-prolyl cis-trans isomerase FKBP12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011546.1 Peptidyl-prolyl cis-trans isomerase FKBP12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 6.5e-36
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKEVLR GTGPKP  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQGSVI
Sbjct: 1  MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQ+GEVARLR
Sbjct: 61 KGWDEGVLGMQLGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. NCBI nr
Match: XP_022141906.1 (peptidyl-prolyl cis-trans isomerase FKBP12 [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKEVLRPGTGPKP AGQLVTVHCTG+GKNGNLSEKFWSTKDPGQKPF FKIGQGSVI
Sbjct: 1  MGVEKEVLRPGTGPKPAAGQLVTVHCTGYGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVL M +GEVARLR
Sbjct: 61 KGWDEGVLDMHLGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy Swiss-Prot
Match: O04287 (Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba OX=3906 GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 7.4e-35
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEK+++R GTGP P+ GQ VTVHCTG+GKNG+LS+KFWSTKDPGQ PF FKIGQGSVI
Sbjct: 1  MGVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQ+GEVARLR
Sbjct: 61 KGWDEGVLGMQLGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy Swiss-Prot
Match: Q8LGG0 (Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana OX=3702 GN=FKBP12 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-34
Identity = 63/79 (79.75%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEK+V+RPG GPKP  GQ VTVHCTGFGK+G+LS+KFWSTKD GQKPF F+IG+G+VI
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGV+GMQ+GEVARLR
Sbjct: 61 KGWDEGVIGMQIGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy Swiss-Prot
Match: Q2U316 (FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=fpr1 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-14
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGF------GKNGNLSEKFWSTKDPGQKPFQFKI 60
          MGVE++++  G+GP P +G  V++H TG+         G   ++F S++ PG+ P    I
Sbjct: 1  MGVERKIITRGSGPSPASGDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNI 60

Query: 61 GQGSVIKGWDEGVLGMQVGEVARLRV 81
          GQG VIKGWDEGV+ M +GE + L +
Sbjct: 61 GQGKVIKGWDEGVMQMSLGEKSTLTI 86

[Close]

BLAST of Sed0013666.2 vs. ExPASy Swiss-Prot
Match: Q554J3 (FK506-binding protein 1 OS=Dictyostelium discoideum OX=44689 GN=fkbp1 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVE  +++ G G  P  G  VTVH  G   NG +   F S++  GQ PF FK+G G VI
Sbjct: 1  MGVEITIIKEGKGNIPPVGSNVTVHHAGTLTNGTV---FDSSRKRGQ-PFNFKLGAGQVI 60

Query: 61 KGWDEGVLGMQVGEVARLRVKYFFPF 87
          KGWDEGV  M+VGE ++L +   F +
Sbjct: 61 KGWDEGVAKMKVGETSKLTISPDFGY 82

[Close]

BLAST of Sed0013666.2 vs. ExPASy Swiss-Prot
Match: Q4HZB8 (FK506-binding protein 1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=FPR1 PE=3 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 5.7e-11
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGF--GKNGNLSEKFWSTKDPGQKPFQFKIGQGS 60
          MGVEK ++  G+GP P  GQ VT+  TG+   ++G   ++F      G+  F   IG G 
Sbjct: 1  MGVEKTIITQGSGPSPQVGQKVTMEYTGWLQKEDGTKGDQF--DTSVGRGDFVVNIGVGQ 60

Query: 61 VIKGWDEGVLGMQVGEVARLRV 81
          VIKGWDEGV  M++GE A L +
Sbjct: 61 VIKGWDEGVTQMKLGEKATLHI 80

[Close]

BLAST of Sed0013666.2 vs. ExPASy TrEMBL
Match: A0A5A7SL33 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001970 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKE+LR GTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQG+VI
Sbjct: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQVGEVARLR
Sbjct: 61 KGWDEGVLGMQVGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy TrEMBL
Match: A0A1S3C0C2 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103495380 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKE+LR GTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQG+VI
Sbjct: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQVGEVARLR
Sbjct: 61 KGWDEGVLGMQVGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy TrEMBL
Match: A0A0A0K2N3 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_7G066210 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 74/79 (93.67%), Postives = 76/79 (96.20%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MG+EKEVLR GTGPKP AGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQG+VI
Sbjct: 1  MGIEKEVLRSGTGPKPAAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQVGEVARLR
Sbjct: 61 KGWDEGVLGMQVGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy TrEMBL
Match: A0A6J1I3A9 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111470607 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKEVLR GTGPKP  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQGSVI
Sbjct: 1  MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQ+GEVARLR
Sbjct: 61 KGWDEGVLGMQLGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. ExPASy TrEMBL
Match: A0A6J1GM67 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111455525 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.1e-36
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEKEVLR GTGPKP  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF FKIGQGSVI
Sbjct: 1  MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGVLGMQ+GEVARLR
Sbjct: 61 KGWDEGVLGMQLGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. TAIR 10
Match: AT5G64350.1 (FK506-binding protein 12 )

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-35
Identity = 63/79 (79.75%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MGVEKEVLRPGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 60
          MGVEK+V+RPG GPKP  GQ VTVHCTGFGK+G+LS+KFWSTKD GQKPF F+IG+G+VI
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61 KGWDEGVLGMQVGEVARLR 80
          KGWDEGV+GMQ+GEVARLR
Sbjct: 61 KGWDEGVIGMQIGEVARLR 79

[Close]

BLAST of Sed0013666.2 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 )

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 2   GVEKEVLRPGTG-PKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 61
           G++K++L+ G G   P  G  V VH TG   +G    KF S++D    PF+F +GQG VI
Sbjct: 39  GLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGT---KFDSSRDRA-TPFKFTLGQGQVI 98

Query: 62  KGWDEGVLGMQVGEVA 77
           KGWD G+  M+ GE A
Sbjct: 99  KGWDIGIKTMKKGENA 110

[Close]

BLAST of Sed0013666.2 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 )

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 2   GVEKEVLRPGTG-PKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVI 61
           G++K++L+ G G   P  G  V VH TG   +G    KF S++D    PF+F +GQG VI
Sbjct: 39  GLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGT---KFDSSRDRA-TPFKFTLGQGQVI 98

Query: 62  KGWDEGVLGMQVGEVA 77
           KGWD G+  M+ GE A
Sbjct: 99  KGWDIGIKTMKKGENA 110

[Close]

BLAST of Sed0013666.2 vs. TAIR 10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53 )

HSP 1 Score: 54.7 bits (130), Expect = 4.7e-08
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 3   VEKEVLRPGTGPKPTAGQLVTVHCTG-FGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVIK 62
           VE+  +    G +   G+ V+V   G   KNG + +      + G+ PF+F++G GSVIK
Sbjct: 373 VEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFD-----SNIGKSPFKFRLGIGSVIK 432

Query: 63  GWDEGVLGMQVGEVARLRV 81
           GWD GV GM+VG+  +L +
Sbjct: 433 GWDVGVNGMRVGDKRKLTI 446

[Close]

BLAST of Sed0013666.2 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 )

HSP 1 Score: 54.3 bits (129), Expect = 6.1e-08
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 19  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFQFKIGQGSVIKGWDEGVLGMQVGEVARL 78
           G  + VH  G   +G + +  +   D    PF+FK+G G VIKGWD+G+LG  VGE  +L
Sbjct: 52  GDTIKVHYRGKLTDGTVFDSSFERGD----PFEFKLGSGQVIKGWDQGLLGACVGEKRKL 109

Query: 79  RV 81
           ++
Sbjct: 112 KI 109

The following BLAST results are available for this feature:

BLAST of Sed0013666.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887405.1	2.0e-37	97.47	peptidyl-prolyl cis-trans isomerase FKBP12 [Benincasa hispida]	[more]
XP_008455137.1	1.0e-36	94.94	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo] >KAA0031440...	[more]
XP_004136893.1	2.2e-36	93.67	peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis sativus] >KGN43763.1 hypothe...	[more]
XP_022953008.1	6.5e-36	93.67	peptidyl-prolyl cis-trans isomerase FKBP12 [Cucurbita moschata] >XP_022971937.1 ...	[more]
XP_022141906.1	1.1e-35	92.41	peptidyl-prolyl cis-trans isomerase FKBP12 [Momordica charantia]	[more]

BLAST of Sed0013666.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04287	7.4e-35	82.28	Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba OX=3906 GN=FKBP12 PE=1 ...	[more]
Q8LGG0	2.8e-34	79.75	Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana OX=3702 GN=FK...	[more]
Q2U316	4.2e-14	41.86	FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=51...	[more]
Q554J3	1.8e-12	46.51	FK506-binding protein 1 OS=Dictyostelium discoideum OX=44689 GN=fkbp1 PE=3 SV=1	[more]
Q4HZB8	5.7e-11	43.90	FK506-binding protein 1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / ...	[more]

BLAST of Sed0013666.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SL33	4.8e-37	94.94	Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3C0C2	4.8e-37	94.94	Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103495380 PE=4 SV=1	[more]
A0A0A0K2N3	1.1e-36	93.67	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_7G066210 PE=4 SV=1	[more]
A0A6J1I3A9	3.1e-36	93.67	Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111470607 PE=4 SV=1	[more]
A0A6J1GM67	3.1e-36	93.67	Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111455525 PE=4 SV=1	[more]

BLAST of Sed0013666.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64350.1	2.0e-35	79.75	FK506-binding protein 12	[more]
AT3G25230.1	2.7e-08	44.74	rotamase FKBP 1	[more]
AT3G25230.2	2.7e-08	44.74	rotamase FKBP 1	[more]
AT4G25340.1	4.7e-08	37.97	FK506 BINDING PROTEIN 53	[more]
AT5G48580.1	6.1e-08	40.32	FK506- and rapamycin-binding protein 15 kD-2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 14..82 e-value: 3.8E-16 score: 59.2
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 19..80 score: 15.493705
None	No IPR available	GENE3D	3.10.50.40		coord: 1..92 e-value: 3.7E-26 score: 94.3
None	No IPR available	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..81
None	No IPR available	PANTHER	PTHR10516:SF435	PEPTIDYLPROLYL ISOMERASE	coord: 1..81
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 2..82

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0013666	Sed0013666	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013666.2-five_prime_utr	Sed0013666.2-five_prime_utr-LG06:8275068..8275171	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013666.2-exon	Sed0013666.2-exon-LG06:8275068..8275259	exon
Sed0013666.2-exon	Sed0013666.2-exon-LG06:8276119..8276152	exon
Sed0013666.2-exon	Sed0013666.2-exon-LG06:8276242..8276303	exon
Sed0013666.2-exon	Sed0013666.2-exon-LG06:8277845..8278411	exon
Sed0013666.2-exon	Sed0013666.2-exon-LG06:8278538..8279086	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013666.2-cds	Sed0013666.2-cds-LG06:8275172..8275259	CDS
Sed0013666.2-cds	Sed0013666.2-cds-LG06:8276119..8276152	CDS
Sed0013666.2-cds	Sed0013666.2-cds-LG06:8276242..8276303	CDS
Sed0013666.2-cds	Sed0013666.2-cds-LG06:8277845..8277942	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013666.2-three_prime_utr	Sed0013666.2-three_prime_utr-LG06:8277943..8278411	three_prime_UTR
Sed0013666.2-three_prime_utr	Sed0013666.2-three_prime_utr-LG06:8278538..8279086	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0013666.2	Sed0013666.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity