Sed0013376.1 (mRNA) Chayote v1

Overview


Name	Sed0013376.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	axial regulator YABBY 4-like
Location	LG04: 4824311 .. 4826407 (+)
Sequence length	606
RNA-Seq Expression	Sed0013376.1
Synteny	Sed0013376.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCATCTCTTTGAACTGCCTGAACAGATTTGCTATGTGCAATGTGGAGTTTGCACCACTATTTTGTTGGTAAGTTGAAGTTATTCTTTGTTCTTGAGCTTTGATTCTATGAATGATTCTTCATGTTCTTTAGTCGGGAAATGTAGGTCAGTGTGCCGTTCAGCAGCTTGTCGATGGCGGTGATGGTGACGTGCGGACACTGCTCGAGCCTCCTTTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCTCCATTTTCTGTCTTCTCTTTATCACAATGTGGTAAAGACTTTGGAGATGTTTAGCGCTTTTGAGTTCCTTTTGAATTCTGATTCATAACCTTCATTCCATTGTGTTGTTGAGTTAAAATCCTTACCCTTTTCTTCTCTTTCTTTTTCTCTTGTGTTTTTTTCAGCCCAAAGAAGATTGTGGAGATATGAATTCAGGGAATTTCTTTGAGAGTGTCAAGAGATCATCAAACTTGAAGTTTTCTGAGTATGAGATTGAAGAAGGATTGATTCCTGTGACACCTCCTGTTATAAACAAACGTAAGAAAATTGTAATTTACAATGATAACGATAAAATGAACAAACTCTACAACCTCTAACTTGGGTTATCTTATTTGATTATATGTTCTTTTAAAGCTCCTCAGAAAAGACAGCGTGCCCCATCAGTTTACAACTGTTTCATCAAGTGAGAAATCTCAACTTCCAAAACTTTTACTACATTTTATAGTGAGTTTGAGATGACTTTTCAAATAAATAAATACAGTGATAAAAAAGTACTTGTAAATTTTAATTAAGCGTACTTTTTATCATTCTAAGCTCATTTGTTATGTGCTTAAAAAAAAATCAATCTTTTGATATAACTAAATTTATCTTAATTTATTAGCTTATATTTTTTAATTTAACATGGTATCGAGGTAAATGTATTCATACTTGGGACAAAGACGTTTCTGATACGATCTGCACTAGAACCCGAACAATATATTAAAATATAACAGATAAAAGACTACAAACTAACCAAGTATTTGATAGGTACTTGAACCTCCCATTTTGAGAAGTCTCTCAAGCTCAACTTGATGCCTTTCTTCTCCCCTAATACCTCTATTTATAACCATAAACTTCTAACTTACTTCCCAAGTAATTGTCTAGATACCCTTATATTATTTCTATTTCTACTGAGGCCCAAAACGTATCAGTTTCATCCTCGGTTAATATTGATTTCTATTTGTCGGATATTTTCAAATTTCTAAACTCAAAAGTGAGGGGAATTGGTTGATTGATATATTAATACTCCAACCTTTACCTTAAGCTTTTAGATTGATAGATGATTTAATACGACTCAGCACTTTTATGTGCTCGTGTTTTAAGCAGGGATGAAATCAGAAGGCTCAAAGCTCAAAATCCTCAAATGACTCACAAGGAGGCCTTCAGAACAGCCGCAAAAAATGTAAGCAGCAACCTAATTAAACTCAAATATAATCTAATTAGGAGTTTATGTTCCATGCATCCTGAACTGTTTTTTTTTGTTCTTTGTTTATTTTTTTTTAAAAAATATTTTTCAGTGGGCAAATTTCCCTCCAATCCAAGAAAGAGAAGGCACAGAAAGCTGTAATCAGATTGAGGAAACTGGAATTTGGAACCCTCAAACTCCCGAGGTAAAAATGCAAACTTTAGGGTCAAATTTTTTTATATTTAATTAACACTGAAAACCCACTACACCAAATGGAAGTTACATTTTGAATTAATAATTAGAATTTGACTTTTGAAGCAAAACAAAACACTAATCATTCATTCACAGTCAGAAGTAAAAACAAAACAAACAACAACAATGTTTGAAAGTGCTCCTTTTCCAAAGCCAGTCAACTTCTCAAAGCTGAACAACCCCAAGTCAAATTTAATGAGACTTCCATTGAAGGGTTGGAGCATTGAGTGCAAAGCTCATTGAATTGAAGGAACTGGGCTCTATTTTTATGGCAATTTTAAATAACTGAAGTAAGTAGTGGCACATTTTGATGAGTTTGTGTGTTTTGAAAAAATTTCAGGTTCACAAAGATGGAAAGTGTTACCCAAGGCATTCAGTTTTGACATAA

mRNA sequence

ATGAACCATCTCTTTGAACTGCCTGAACAGATTTGCTATGTGCAATGTGGAGTTTGCACCACTATTTTGTTGGTCAGTGTGCCGTTCAGCAGCTTGTCGATGGCGGTGATGGTGACGTGCGGACACTGCTCGAGCCTCCTTTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCTCCATTTTCTGTCTTCTCTTTATCACAATGTGCCCAAAGAAGATTGTGGAGATATGAATTCAGGGAATTTCTTTGAGAGTGTCAAGAGATCATCAAACTTGAAGTTTTCTGAGTATGAGATTGAAGAAGGATTGATTCCTGTGACACCTCCTGTTATAAACAAACCTCCTCAGAAAAGACAGCGTGCCCCATCAGTTTACAACTGTTTCATCAAGGATGAAATCAGAAGGCTCAAAGCTCAAAATCCTCAAATGACTCACAAGGAGGCCTTCAGAACAGCCGCAAAAAATTGGGCAAATTTCCCTCCAATCCAAGAAAGAGAAGGCACAGAAAGCTGTAATCAGATTGAGGAAACTGGAATTTGGAACCCTCAAACTCCCGAGGTTCACAAAGATGGAAAGTGTTACCCAAGGCATTCAGTTTTGACATAA

Coding sequence (CDS)

ATGAACCATCTCTTTGAACTGCCTGAACAGATTTGCTATGTGCAATGTGGAGTTTGCACCACTATTTTGTTGGTCAGTGTGCCGTTCAGCAGCTTGTCGATGGCGGTGATGGTGACGTGCGGACACTGCTCGAGCCTCCTTTCTGTCAACATGATGAAAGCCACTCTGGTTCCTCTCCATTTTCTGTCTTCTCTTTATCACAATGTGCCCAAAGAAGATTGTGGAGATATGAATTCAGGGAATTTCTTTGAGAGTGTCAAGAGATCATCAAACTTGAAGTTTTCTGAGTATGAGATTGAAGAAGGATTGATTCCTGTGACACCTCCTGTTATAAACAAACCTCCTCAGAAAAGACAGCGTGCCCCATCAGTTTACAACTGTTTCATCAAGGATGAAATCAGAAGGCTCAAAGCTCAAAATCCTCAAATGACTCACAAGGAGGCCTTCAGAACAGCCGCAAAAAATTGGGCAAATTTCCCTCCAATCCAAGAAAGAGAAGGCACAGAAAGCTGTAATCAGATTGAGGAAACTGGAATTTGGAACCCTCAAACTCCCGAGGTTCACAAAGATGGAAAGTGTTACCCAAGGCATTCAGTTTTGACATAA

Protein sequence

MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLHFLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIWNPQTPEVHKDGKCYPRHSVLT

Homology

[Close]

BLAST of Sed0013376.1 vs. NCBI nr
Match: XP_022151051.1 (axial regulator YABBY 4-like [Momordica charantia])

HSP 1 Score: 338.2 bits (866), Expect = 4.9e-89
Identity = 166/202 (82.18%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPEQICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 1   MNHLFDLPEQICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEE-GLIPVTPPVINKPPQKRQ 120
           FLSS+  NVPKE  G+MNSG F +S K +SNLKFSEYE +E GLIPVTPPV+NKPP KRQ
Sbjct: 61  FLSSIARNVPKESGGEMNSGKFLDSFK-ASNLKFSEYEDDEGGLIPVTPPVVNKPPAKRQ 120

Query: 121 RAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGI 180
           RAPS YNCFIK+EIRRLKAQNPQM+HKEAFRTAAKNWANFPPIQ++E  ESCNQIEE G+
Sbjct: 121 RAPSAYNCFIKNEIRRLKAQNPQMSHKEAFRTAAKNWANFPPIQQKEDAESCNQIEENGV 180

Query: 181 WNPQTPEVHKDGKCYPRHSVLT 202
           W+ Q PEVH DGKC  RHSVLT
Sbjct: 181 WDTQMPEVHNDGKCSLRHSVLT 201

[Close]

BLAST of Sed0013376.1 vs. NCBI nr
Match: XP_038893210.1 (axial regulator YABBY 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88
Identity = 165/201 (82.09%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MN+LFELPE+ICYVQCG+CTTILLVSVP SSLS AV VTCGHCSSLLSVNMMKA LVPLH
Sbjct: 1   MNNLFELPEKICYVQCGICTTILLVSVPCSSLSTAVTVTCGHCSSLLSVNMMKANLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL  NVPKE C +MNSG FF+S KR S LKFSEYE+EEGLIPVTPP +NKPP+KRQR
Sbjct: 61  FLSSLSCNVPKEACREMNSGKFFDSFKR-SKLKFSEYEVEEGLIPVTPPFVNKPPEKRQR 120

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIW 180
           APS YNCFIKDEIRRLKAQNP+MTHKEAFRTAAKNWANFPPI E+E T  CN  EE G W
Sbjct: 121 APSAYNCFIKDEIRRLKAQNPEMTHKEAFRTAAKNWANFPPIHEKEDTMGCN--EENGTW 180

Query: 181 NPQTPEVHKDGKCYPRHSVLT 202
           N Q PEVHKDGKC+PRHS LT
Sbjct: 181 NTQIPEVHKDGKCFPRHSFLT 198

[Close]

BLAST of Sed0013376.1 vs. NCBI nr
Match: KAE8648718.1 (hypothetical protein Csa_008048, partial [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 156/191 (81.68%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPE+ICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 20  MNHLFDLPEKICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 79

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL HNVPKE   +MNSG FF+S KR SNLKFSEYE+E+ LIPVT P +NKPP++RQR
Sbjct: 80  FLSSLSHNVPKETYREMNSGKFFDSFKR-SNLKFSEYEVEDDLIPVTTPFVNKPPERRQR 139

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIW 180
           APS YNCFIKDEIRRLK QNP+MTHKEAFRTAAKNWANFPPIQE++  E CNQIEE G W
Sbjct: 140 APSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEKCNQIEENGSW 199

Query: 181 NPQTPEVHKDG 192
           N Q PEVHK+G
Sbjct: 200 NTQIPEVHKEG 209

[Close]

BLAST of Sed0013376.1 vs. NCBI nr
Match: XP_004135480.2 (axial regulator YABBY 4 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 156/191 (81.68%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPE+ICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 42  MNHLFDLPEKICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 101

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL HNVPKE   +MNSG FF+S KR SNLKFSEYE+E+ LIPVT P +NKPP++RQR
Sbjct: 102 FLSSLSHNVPKETYREMNSGKFFDSFKR-SNLKFSEYEVEDDLIPVTTPFVNKPPERRQR 161

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIW 180
           APS YNCFIKDEIRRLK QNP+MTHKEAFRTAAKNWANFPPIQE++  E CNQIEE G W
Sbjct: 162 APSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEKCNQIEENGSW 221

Query: 181 NPQTPEVHKDG 192
           N Q PEVHK+G
Sbjct: 222 NTQIPEVHKEG 231

[Close]

BLAST of Sed0013376.1 vs. NCBI nr
Match: XP_008446193.1 (PREDICTED: axial regulator YABBY 4 [Cucumis melo])

HSP 1 Score: 321.6 bits (823), Expect = 4.7e-84
Identity = 155/191 (81.15%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPE+ICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 1   MNHLFDLPEKICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL HNVPKE   +MNSG FF+S KR S LKFSEYE+EE LIP T P +NKPP+KRQR
Sbjct: 61  FLSSLSHNVPKETYREMNSGKFFDSFKR-SKLKFSEYEVEEDLIPATTPFVNKPPEKRQR 120

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIW 180
           APS YNCFIKDEIRRLK QNP+MTHKEAFRTAAKNWANFPPIQE++  E CNQ+EE G W
Sbjct: 121 APSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEKCNQVEENGSW 180

Query: 181 NPQTPEVHKDG 192
           N Q PEVHK+G
Sbjct: 181 NTQIPEVHKEG 190

[Close]

BLAST of Sed0013376.1 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 7.4e-48
Identity = 100/179 (55.87%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           +NHLF+LP QIC+VQCG CTTILLVSVPF+SLSM V V CGHC+SLLSVN+MKA+ +PLH
Sbjct: 11  LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61  FLSSLYH-------NVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINK 120
            L+SL H        V   D  +  +    +  + S     S  + E+  +     V+NK
Sbjct: 71  LLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNK 130

Query: 121 PPQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPI-QEREGTESC 172
           PP+KRQRAPS YNCFIK+EIRRLKAQNP M HKEAF  AAKNWA+FPP   +R  ++ C
Sbjct: 131 PPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAHNKRAASDQC 189

[Close]

BLAST of Sed0013376.1 vs. ExPASy Swiss-Prot
Match: A2PZN8 (Protein YABBY 7 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB7 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-28
Identity = 71/170 (41.76%), Postives = 100/170 (58.82%), Query Frame = 0


Query: 2   NHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLHF 61
           +H   L E++  VQC  C T+LLVSVP SS+   V V CGHCS +LS     A  +P   
Sbjct: 7   HHCSGLRERLGCVQCSFCATVLLVSVPCSSVLRVVAVQCGHCSGILS-----AVNLPPSP 66

Query: 62  LSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQRA 121
           +S+     P+E       G +  S + S + +      ++   P    V NKPP ++QR 
Sbjct: 67  VSASIELTPQELDAGPPPGEY--SDESSGDDREGRDAEDDAPAPAAAAVANKPPGRKQRT 126

Query: 122 PSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESC 172
           PS YNCF+K+EI+R+K+  P +THK+AF TAAKNWA+ P IQ++ G +SC
Sbjct: 127 PSAYNCFVKEEIKRIKSMEPNITHKQAFSTAAKNWAHLPRIQQKRGRDSC 169

[Close]

BLAST of Sed0013376.1 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-28
Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 5   FELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNM-MKATLVPLHFLS 64
           F   +Q+CYV C  C T+L VSVP SSL   V V CGHCS+LLSV + M+A L+P   +S
Sbjct: 19  FSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLP--SVS 78

Query: 65  SLYHNV--------PKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVT-------- 124
           +L H+         P     +M SG    ++    +   S +   E L+  T        
Sbjct: 79  NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDH 138

Query: 125 ------PPVINKPPQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPP 163
                 PP  N+PP+KRQR PS YN FIK+EI+R+KA NP ++H+EAF  AAKNWA+FP 
Sbjct: 139 LQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH 197

[Close]

BLAST of Sed0013376.1 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-28
Identity = 75/186 (40.32%), Postives = 112/186 (60.22%), Query Frame = 0


Query: 9   EQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVN----MMKATLVPLH---- 68
           E++CYV C  CTTIL VSVP++SL   V V CGHC++LLS+N    + + +  P+H    
Sbjct: 8   ERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQ 67

Query: 69  ----FLSSLYHNVPKEDC--GDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKP 128
                 +SL   V ++DC     ++ N  E++ R +              P  PP+  +P
Sbjct: 68  PHRQHTTSL---VTRKDCASSSRSTNNLSENIDREA--------------PRMPPI--RP 127

Query: 129 PQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQ---EREGTESC 178
           P+KRQR PS YN FIK+EI+R+KA NP+++H+EAF TAAKNWA+FP I    + +G +  
Sbjct: 128 PEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKG 174

[Close]

BLAST of Sed0013376.1 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.5e-28
Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 0


Query: 8   PEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVN---MMKATLVPLHFLSS 67
           PE +CYV C  C TI  VSVP +S+   V V CGHC+SLLSVN   +++A     H   +
Sbjct: 9   PEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDN 68

Query: 68  L-YHNVP-KEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQRAP 127
           L  HN+  +E+  +  S + +  V     + FS+ + E  L         +PP+KRQR P
Sbjct: 69  LKMHNMSFRENYSEYGSSSRYGRVP----MMFSKNDTEHMLHV-------RPPEKRQRVP 128

Query: 128 SVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGT-ESCNQIEET-GIW 184
           S YN FIK+EIRR+KA NP ++H+EAF TAAKNWA+FP I    G+ ES  +++E  G  
Sbjct: 129 SAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHFGLGSHESSKKLDEAIGAP 180

[Close]

BLAST of Sed0013376.1 vs. ExPASy TrEMBL
Match: A0A6J1DDE4 (axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111019075 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.4e-89
Identity = 166/202 (82.18%), Postives = 180/202 (89.11%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPEQICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 1   MNHLFDLPEQICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEE-GLIPVTPPVINKPPQKRQ 120
           FLSS+  NVPKE  G+MNSG F +S K +SNLKFSEYE +E GLIPVTPPV+NKPP KRQ
Sbjct: 61  FLSSIARNVPKESGGEMNSGKFLDSFK-ASNLKFSEYEDDEGGLIPVTPPVVNKPPAKRQ 120

Query: 121 RAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGI 180
           RAPS YNCFIK+EIRRLKAQNPQM+HKEAFRTAAKNWANFPPIQ++E  ESCNQIEE G+
Sbjct: 121 RAPSAYNCFIKNEIRRLKAQNPQMSHKEAFRTAAKNWANFPPIQQKEDAESCNQIEENGV 180

Query: 181 WNPQTPEVHKDGKCYPRHSVLT 202
           W+ Q PEVH DGKC  RHSVLT
Sbjct: 181 WDTQMPEVHNDGKCSLRHSVLT 201

[Close]

BLAST of Sed0013376.1 vs. ExPASy TrEMBL
Match: A0A1S3BDZ8 (axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.3e-84
Identity = 155/191 (81.15%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPE+ICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 1   MNHLFDLPEKICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL HNVPKE   +MNSG FF+S KR S LKFSEYE+EE LIP T P +NKPP+KRQR
Sbjct: 61  FLSSLSHNVPKETYREMNSGKFFDSFKR-SKLKFSEYEVEEDLIPATTPFVNKPPEKRQR 120

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIW 180
           APS YNCFIKDEIRRLK QNP+MTHKEAFRTAAKNWANFPPIQE++  E CNQ+EE G W
Sbjct: 121 APSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEKCNQVEENGSW 180

Query: 181 NPQTPEVHKDG 192
           N Q PEVHK+G
Sbjct: 181 NTQIPEVHKEG 190

[Close]

BLAST of Sed0013376.1 vs. ExPASy TrEMBL
Match: A0A0A0KTN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600930 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 153/187 (81.82%), Postives = 166/187 (88.77%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLF+LPE+ICYVQCG+CTTILLVSVP SSLSMAV VTCGHCSSLLSVNMMKATLVPLH
Sbjct: 1   MNHLFDLPEKICYVQCGICTTILLVSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL HNVPKE   +MNSG FF+S KR SNLKFSEYE+E+ LIPVT P +NKPP++RQR
Sbjct: 61  FLSSLSHNVPKETYREMNSGKFFDSFKR-SNLKFSEYEVEDDLIPVTTPFVNKPPERRQR 120

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQEREGTESCNQIEETGIW 180
           APS YNCFIKDEIRRLK QNP+MTHKEAFRTAAKNWANFPPIQE++  E CNQIEE G W
Sbjct: 121 APSAYNCFIKDEIRRLKTQNPEMTHKEAFRTAAKNWANFPPIQEKDDKEKCNQIEENGSW 180

Query: 181 NPQTPEV 188
           N Q PEV
Sbjct: 181 NTQIPEV 186

[Close]

BLAST of Sed0013376.1 vs. ExPASy TrEMBL
Match: A0A6J1JEX5 (axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.5e-78
Identity = 152/202 (75.25%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNHLFELPE+ICYVQCG+CTTILLVSVP SSLSM V VTCGHCSSLLSVNM++ATLVPLH
Sbjct: 1   MNHLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL  N+PKE C +M+SG  F+S  R SNLKFSEYE+EEGLIPVTPP +NKPP+KRQR
Sbjct: 61  FLSSLSRNLPKETCREMSSGKLFDSFIR-SNLKFSEYEVEEGLIPVTPPSVNKPPEKRQR 120

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPP-IQEREGTESCNQIEETGI 180
            PS YNCFIKDEIRRLKA+NPQMTHKEAFRTAAKNWANFPP IQ++E  +          
Sbjct: 121 VPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPPTIQQKEDPQ---------- 180

Query: 181 WNPQTPEVHKDGKCYPRHSVLT 202
            N Q PEV K+GKC+PR SVLT
Sbjct: 181 -NTQIPEVEKNGKCFPRPSVLT 190

[Close]

BLAST of Sed0013376.1 vs. ExPASy TrEMBL
Match: A0A6J1H0F2 (axial regulator YABBY 4-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111458453 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.5e-78
Identity = 151/202 (74.75%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           MNH FELPE+ICYVQCG+CTTILLVSVP SSLSM V VTCGHCSSLLSVNM++ATLVPLH
Sbjct: 1   MNHPFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLH 60

Query: 61  FLSSLYHNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQR 120
           FLSSL  N+PKE C +M+SG  F+S  R SNLKFSEYE+EEGLIPVTPP ++KPP+KRQR
Sbjct: 61  FLSSLSRNLPKEACREMSSGKLFDSFIR-SNLKFSEYEVEEGLIPVTPPSVHKPPEKRQR 120

Query: 121 APSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPP-IQEREGTESCNQIEETGI 180
            PS YNCFIKDEIRRLKA+NPQMTHKEAFRTAAKNWANFPP IQ++E  +          
Sbjct: 121 VPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPPTIQQKEDPQ---------- 180

Query: 181 WNPQTPEVHKDGKCYPRHSVLT 202
            N Q PEV K+GKC+PRHSVLT
Sbjct: 181 -NTQIPEVEKNGKCFPRHSVLT 190

[Close]

BLAST of Sed0013376.1 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 191.8 bits (486), Expect = 5.3e-49
Identity = 100/179 (55.87%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 1   MNHLFELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATLVPLH 60
           +NHLF+LP QIC+VQCG CTTILLVSVPF+SLSM V V CGHC+SLLSVN+MKA+ +PLH
Sbjct: 11  LNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLH 70

Query: 61  FLSSLYH-------NVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINK 120
            L+SL H        V   D  +  +    +  + S     S  + E+  +     V+NK
Sbjct: 71  LLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNK 130

Query: 121 PPQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPI-QEREGTESC 172
           PP+KRQRAPS YNCFIK+EIRRLKAQNP M HKEAF  AAKNWA+FPP   +R  ++ C
Sbjct: 131 PPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAHNKRAASDQC 189

[Close]

BLAST of Sed0013376.1 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 5   FELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNM-MKATLVPLHFLS 64
           F   +Q+CYV C  C T+L VSVP SSL   V V CGHCS+LLSV + M+A L+P   +S
Sbjct: 19  FSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLP--SVS 78

Query: 65  SLYHNV--------PKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVT-------- 124
           +L H+         P     +M SG    ++    +   S +   E L+  T        
Sbjct: 79  NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDH 138

Query: 125 ------PPVINKPPQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPP 163
                 PP  N+PP+KRQR PS YN FIK+EI+R+KA NP ++H+EAF  AAKNWA+FP 
Sbjct: 139 LQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPH 197

[Close]

BLAST of Sed0013376.1 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-29
Identity = 75/186 (40.32%), Postives = 112/186 (60.22%), Query Frame = 0


Query: 9   EQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVN----MMKATLVPLH---- 68
           E++CYV C  CTTIL VSVP++SL   V V CGHC++LLS+N    + + +  P+H    
Sbjct: 8   ERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQ 67

Query: 69  ----FLSSLYHNVPKEDC--GDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKP 128
                 +SL   V ++DC     ++ N  E++ R +              P  PP+  +P
Sbjct: 68  PHRQHTTSL---VTRKDCASSSRSTNNLSENIDREA--------------PRMPPI--RP 127

Query: 129 PQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPIQ---EREGTESC 178
           P+KRQR PS YN FIK+EI+R+KA NP+++H+EAF TAAKNWA+FP I    + +G +  
Sbjct: 128 PEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKG 174

[Close]

BLAST of Sed0013376.1 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.7e-27
Identity = 72/169 (42.60%), Postives = 97/169 (57.40%), Query Frame = 0


Query: 5   FELPEQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKATL-----VPL 64
           F   + +CYVQC  C TIL V+VP++SL   V V CG C++LLSVNM    L     + L
Sbjct: 19  FSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQL 78

Query: 65  HFLSSLYHNVP------KEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINK 124
                 Y N        ++   +MN     +    +    F +   ++  IP  PPV N+
Sbjct: 79  QLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLH-QQHEIPKAPPV-NR 138

Query: 125 PPQKRQRAPSVYNCFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPI 163
           PP+KRQR PS YN FIK+EI+R+KA NP ++H+EAF  AAKNWA+FP I
Sbjct: 139 PPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 185

[Close]

BLAST of Sed0013376.1 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 9   EQICYVQCGVCTTILLVSVPFSSLSMAVMVTCGHCSSLLSVNMMKA--TLVPLHFLSSLY 68
           EQ+CY+ C  C  IL V+VP SSL   V V CGHC++L SVNM  A  +L   +F ++ Y
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNY 68

Query: 69  HNVPKEDCGDMNSGNFFESVKRSSNLKFSEYEIEEGLIPVTPPVINKPPQKRQRAPSVYN 128
             VP+      +S +  +   R S    +E  I           +N+PP+KRQR PS YN
Sbjct: 69  -AVPEY---GSSSRSHTKIPSRISTRTITEQRI-----------VNRPPEKRQRVPSAYN 128

Query: 129 CFIKDEIRRLKAQNPQMTHKEAFRTAAKNWANFPPI 163
            FIK+EI+R+KA NP ++H+EAF TAAKNWA+FP I
Sbjct: 129 QFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHI 149

The following BLAST results are available for this feature:

BLAST of Sed0013376.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151051.1	4.9e-89	82.18	axial regulator YABBY 4-like [Momordica charantia]	[more]
XP_038893210.1	1.4e-88	82.09	axial regulator YABBY 4 isoform X2 [Benincasa hispida]	[more]
KAE8648718.1	1.2e-84	81.68	hypothetical protein Csa_008048, partial [Cucumis sativus]	[more]
XP_004135480.2	1.2e-84	81.68	axial regulator YABBY 4 [Cucumis sativus]	[more]
XP_008446193.1	4.7e-84	81.15	PREDICTED: axial regulator YABBY 4 [Cucumis melo]	[more]

BLAST of Sed0013376.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	7.4e-48	55.87	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
A2PZN8	1.0e-28	41.76	Protein YABBY 7 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB7 PE=2 SV=1	[more]
Q9XFB1	2.9e-28	43.09	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
Q9XFB0	6.5e-28	40.32	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q10FZ7	8.5e-28	43.72	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]

BLAST of Sed0013376.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDE4	2.4e-89	82.18	axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111019075 PE=3...	[more]
A0A1S3BDZ8	2.3e-84	81.15	axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1	[more]
A0A0A0KTN4	1.6e-82	81.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600930 PE=3 SV=1	[more]
A0A6J1JEX5	2.5e-78	75.25	axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1H0F2	5.5e-78	74.75	axial regulator YABBY 4-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Sed0013376.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	5.3e-49	55.87	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	2.1e-29	43.09	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	4.6e-29	40.32	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	5.7e-27	42.60	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.7e-26	45.51	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 111..173 e-value: 1.5E-7 score: 33.6
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 105..161
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 8..163 e-value: 4.2E-55 score: 186.8
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..181
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 1..181
None	No IPR available	CDD	cd00084	HMG-box	coord: 120..166 e-value: 8.17728E-4 score: 34.5168

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0013376	Sed0013376	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4824311..4824382	exon
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4824460..4824594	exon
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4824728..4824860	exon
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4824957..4825005	exon
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4825689..4825764	exon
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4825880..4825972	exon
Sed0013376.1-exon	Sed0013376.1-exon-LG04:4826360..4826407	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4824311..4824382	CDS
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4824460..4824594	CDS
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4824728..4824860	CDS
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4824957..4825005	CDS
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4825689..4825764	CDS
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4825880..4825972	CDS
Sed0013376.1-cds	Sed0013376.1-cds-LG04:4826360..4826407	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0013376.1	Sed0013376.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development