Sed0012629.1 (mRNA) Chayote v1

Overview


Name	Sed0012629.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Tryptophan synthase
Location	LG03: 1801649 .. 1805790 (+)
Sequence length	1816
RNA-Seq Expression	Sed0012629.1
Synteny	Sed0012629.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGAAAATAATTGAAATGGCTGCTCATTACCTTGCTGTTGGGTCCTCAGCTTCTTCAGCCATCAATGGCAGAGGTACTTCATTTCTTTTCTCTTTTTTTCCCCTGTATTTTTGTTGCTGCTTAGGGTTTAAGGTACTTCATTTATTCTGTTTGTGTTTGGAACTTTAGCTGAAGTGAAATGAACATGTAAATGGATTGAAGCTAAAAAACTCCTTTTTCATTTTACTACTTATGATTGTTGATCATGGTTTGTTTAGTGATCTTGTTTCTTTTTGTGCTTTTTGAGTATGACCCAGGTGGTCAAATGAGTTCTTACCTTCCAAATCTTTGTTTTGGGTTAACATTTGGAGATGAAAGTGCAGATACTTTGGGAATTTCTTACTTGGACATAACCCATTAATTTTTTCTTTATAATTTTTGAGATGTGTTTCTCTAAGAGATAGAGATTGCATTATTTATTGAAGTAGTATAGACTTGCCAAACAAGAGTAGTAACTCATTGGCATCAATGTAGTCGCATGACCGACCTTGGGTTCAAATCCCCCAACCACGAAAAAAAAAGTAGTATAAACTTGAACGCGAAAGATAGTGCATGCTCTCTATTTTTGGATAAAGATGTATGTGGTTAATTAATATTACCCATATATAAGATATTATTCTTAGTTTAGATCGAGTTAGGTTGAATCGAGCAAAAAAATTGGCCAAAATAACCAACCCAAAGAAAATTATAACCCAACTCAACTCTAACTGTTTGGGTTTTGGGTATCTGGGTTGCTTTGGTTGTTCATTTTTGTACAACTTTAGGATATGCATGCTTTGGTGCTAGATCTGCTGCTATTTTTATGAGCTTTTTGTTGGTTTTAATCACACGTGTGATGATGCTGGATTCACTTTTTCCTTTTATTCTCTTTGGAAGTGCTTTTTCTGTTTTTGGATTCCCAATTTAATATAGGAGTTGGTAGTTTTATGTAGAGCTGGTCAAGTTAGCTATGGAAGACAATTCCAATCTGAGAATGTTGTGATACTCTATCAATCACAAACATTTCGAGTGTCAGTGTCGGACACGTATCAGACACGCAAATTGAAATGTCCAATTTAAATAATGAACACAGCGCGGGAAGTACATGTTGACTGATTTTTTTAATAAAAAAATAATTTTTTAAAGTAAATGTAAGACCATTTTATTTATTATATTAAGCCCACTTATTAAACTCACCTTTTACATATTTAAATAATAAAAAAAGAAGTTAAACCTAATATAATATTTGATAAAGAAGAAATTTCTCCAACGATCTATGCTGTTATTTGCGACCAACTCCAAGAACTCTTCGGTTTTCATCTTCTTCAACTCTTTGTCAATCTTTCGACTTGAACAACATCGAGTATCTCTCCAAGTCGTGCGTACATCTTCATCCACATGGGAGTGTCTTTCCAAATTAAACTTAATATAACATGTTTTGTTTTAGTGTAATTGTTCGTGGTAAGATTATGTTAGTTATTATTTTATTCTAATTATTTTTATATATATAATCAACATGTCTGTGTCCTAGTTTTTTTTATAATTGACGTGTCGTGTCCATGTTTGTGTTTCTTAGGTGATACTTTTCTCATAAATATTAAGTTTTTCAGACCTTCCCTATTTCTCTTCATCTTTTATCATATTTAAACTTTTTCACCTCAGTTGGGGAGCAATTGCTTGGATGTCTGTCACTTAAGAAAAATCCTAGACATTTGAGGTTTTCAAATGGTTTTAGAGCAAAAGCTGCATTAAATCCTAGTTTAAGGGCAGTCGAGATCCCGCGCCAATGGTACAATCTGGTTGCAGATCTTCCAGTTAAACCTCCTCCTAAATTGCATCCCAAAACTTTGGAACCAATCAGACCTGAAGACTTGTCCCCTCTCTTTTGCGACGAATTGATTAAGCAAGAGGCAAGTACTGATCGATATATAAACATCCCAGACGAAGTTGTCGACATCTACGGGCTTTGGCGCCCAACTCCTCTCATCAGGTAATTTGTAGTATGTCTTTCTAAAATGTATGCAGACTTGTTTACCACAATGTTTACTGTCATGACATCCTGAAGTGAAGCTTTTCCTTGTTGATCTTTTCTAACTTGCATCTTTCCATTATTAAGAGGCATCTAATAGCGTTTTTTTACATATTCTAGAGCCAAGAGGTTAGAGAAGCTTCTTGACACACCGGCTCGAATTTACTACAAGTATGAAGGAGTTAGCCCTGCTGGGTCGCACAAAGCCAACTCTGCTGTTCCACAAGTCTGGTATAATGCACAGGCAGGTGTCAAGAATATTGTTACAGAAACTGGGGCTGGTCAATGGGGAAGCGCTTTGGCCTTTGCTTGTAGCTTATTCGATCTCGGCTGCGAGGTAAGAAGCAGTAGTTGTGTTGATTAACTATTGAATTAAGATGCTGAAAAATTGTTCAAAACTTGACTTGTTGGTTGCTTCTGTAACACATAACGTGAAATGTGTGTTGTTTCTTTAAATAGGTGTGGCAAGTGCGTGCGTCTTATGATCAAAAACCGTATCGACGACTGATGATGCAAACTTGGGGAGCGAAAGTACATCCATCTCCATCCGATCTCACGGACGCAGGCAGGAAATTGCTTCAAGTTGACCCGTCAAGCCCGGGAAGTTTAGGAATTGCCATTTCAGAAGCTGTGGAGGTTGCAGCTCAAAATGCTGATACCAAGTACTGTTTGGGAAGTGTTCTCGACCATGTTTTGCTCCACCAAACTGTCATCGGTGAAGAGTGTATAGAACAAATGAGAGCCTTAGGTGAGACCCCAGATGTCATCATAGGATGCACTGGTGGGGGTTCCAATTTTGCAGGTCTTAGCTTCCCGTTCCTTCGAGAGAAACTTGCTGGGAAAATAAGCCCTGTTATTAGAGCAGTTGAACCTGCAGCATGTCCTTCATTAACAAAAGGTGTTTATGCTTATGATTATGGCGATACGGCCAGGATGACTCCGTTGATGAAGATGCACACACTTGGTCACAACTTCATTCCTGACCCAATTCACGCCGGTAATGTATAATACGCTATGGAAACTGATTTAATGCATACGCTTTCGAAACTGATATGCTGCATTACGATGTGCTTCTTGACATTTTAACTAACTTTTATATTGTCCTTATAATAGATTATATGAGGTCAATACACTTCTTCTTTCCTCTTTGATCCTGCTAAGTCGAACACTTCACACATGTAATAGAAACTAAGGGAAATAAAGAAGGAAACTCTGTCATGCAACATTCTTCTATACACTCATGCAGTTTCTAACACATCGAGCTCTTTGTTTCTCTCGATCGTCATCTTAGCTTACTTCTTTTTGGTAGGTGGATTACGGTATCATGGTATGTCTCCATTGATCTCACATGTCTACAATCTTGGTCTTATGGAAGCTATATCACTTCCCCAAACAGAATGCTTTCAAGGTATCGTTACATAACCGAATTTATCTGAACGTTAACTGACCGGTGCTCTGGAGAACAGACCAGTTACTGGAAAATTGGCTCTGCTAGTTGGCCATCAATGCAGACTGAATTCCTCTTTGTTTGCAGGTGCTATACAATTTGCAAGAACTGAAGGACTAATACCAGCACCCGAGCCAACTCACGCCATAGCTGCAACTATCCGAGAGGCTCTTCGCTGTCGAGAAACTGGAGAATCAAAAGTTATTCTCACAGCCATGTGCGGGCACGGTCACTTCGACCTACCAGCTTATGAGAAGTACCTGCAAGGGGAGATGACAGATCTTTCTTTTACAGATGAGAAGATAAAAGAATCACTCACCAACATTCCTCAGGTGGCTTGAAGTAATGTCATGAGTACTTCTTCAGACTTCAAATTTACATTGATATATTTGGTTGCGGTTTTATTGACAGCTCTAGATGTCGCGCTCTCGAGCTGAATAACCACCGAGAGGTTGTTACTCGCAAGAATTATGATGTTCGACATTTTTAGATAATTAGGTGTTTAAGTTTGTATTATCGTTTTTGGTACTTTGGCATAGTATGTTCATAGGAAGGCATTTCTATATTGCCATTGAGCTCAAAAGGAATAAATTGAAATGTTTCAAAACACAATGTTGGCTTAATCTTATTTGATCCCACCAAAAAA

mRNA sequence

CACAGAAAATAATTGAAATGGCTGCTCATTACCTTGCTGTTGGGTCCTCAGCTTCTTCAGCCATCAATGGCAGAGTTGGGGAGCAATTGCTTGGATGTCTGTCACTTAAGAAAAATCCTAGACATTTGAGGTTTTCAAATGGTTTTAGAGCAAAAGCTGCATTAAATCCTAGTTTAAGGGCAGTCGAGATCCCGCGCCAATGGTACAATCTGGTTGCAGATCTTCCAGTTAAACCTCCTCCTAAATTGCATCCCAAAACTTTGGAACCAATCAGACCTGAAGACTTGTCCCCTCTCTTTTGCGACGAATTGATTAAGCAAGAGGCAAGTACTGATCGATATATAAACATCCCAGACGAAGTTGTCGACATCTACGGGCTTTGGCGCCCAACTCCTCTCATCAGAGCCAAGAGGTTAGAGAAGCTTCTTGACACACCGGCTCGAATTTACTACAAGTATGAAGGAGTTAGCCCTGCTGGGTCGCACAAAGCCAACTCTGCTGTTCCACAAGTCTGGTATAATGCACAGGCAGGTGTCAAGAATATTGTTACAGAAACTGGGGCTGGTCAATGGGGAAGCGCTTTGGCCTTTGCTTGTAGCTTATTCGATCTCGGCTGCGAGGTGTGGCAAGTGCGTGCGTCTTATGATCAAAAACCGTATCGACGACTGATGATGCAAACTTGGGGAGCGAAAGTACATCCATCTCCATCCGATCTCACGGACGCAGGCAGGAAATTGCTTCAAGTTGACCCGTCAAGCCCGGGAAGTTTAGGAATTGCCATTTCAGAAGCTGTGGAGGTTGCAGCTCAAAATGCTGATACCAAGTACTGTTTGGGAAGTGTTCTCGACCATGTTTTGCTCCACCAAACTGTCATCGGTGAAGAGTGTATAGAACAAATGAGAGCCTTAGGTGAGACCCCAGATGTCATCATAGGATGCACTGGTGGGGGTTCCAATTTTGCAGGTCTTAGCTTCCCGTTCCTTCGAGAGAAACTTGCTGGGAAAATAAGCCCTGTTATTAGAGCAGTTGAACCTGCAGCATGTCCTTCATTAACAAAAGGTGTTTATGCTTATGATTATGGCGATACGGCCAGGATGACTCCGTTGATGAAGATGCACACACTTGGTCACAACTTCATTCCTGACCCAATTCACGCCGGTGGATTACGGTATCATGGTATGTCTCCATTGATCTCACATGTCTACAATCTTGGTCTTATGGAAGCTATATCACTTCCCCAAACAGAATGCTTTCAAGGTGCTATACAATTTGCAAGAACTGAAGGACTAATACCAGCACCCGAGCCAACTCACGCCATAGCTGCAACTATCCGAGAGGCTCTTCGCTGTCGAGAAACTGGAGAATCAAAAGTTATTCTCACAGCCATGTGCGGGCACGGTCACTTCGACCTACCAGCTTATGAGAAGTACCTGCAAGGGGAGATGACAGATCTTTCTTTTACAGATGAGAAGATAAAAGAATCACTCACCAACATTCCTCAGGTGGCTTGAAGTAATGTCATGAGTACTTCTTCAGACTTCAAATTTACATTGATATATTTGGTTGCGGTTTTATTGACAGCTCTAGATGTCGCGCTCTCGAGCTGAATAACCACCGAGAGGTTGTTACTCGCAAGAATTATGATGTTCGACATTTTTAGATAATTAGGTGTTTAAGTTTGTATTATCGTTTTTGGTACTTTGGCATAGTATGTTCATAGGAAGGCATTTCTATATTGCCATTGAGCTCAAAAGGAATAAATTGAAATGTTTCAAAACACAATGTTGGCTTAATCTTATTTGATCCCACCAAAAAA

Coding sequence (CDS)

ATGGCTGCTCATTACCTTGCTGTTGGGTCCTCAGCTTCTTCAGCCATCAATGGCAGAGTTGGGGAGCAATTGCTTGGATGTCTGTCACTTAAGAAAAATCCTAGACATTTGAGGTTTTCAAATGGTTTTAGAGCAAAAGCTGCATTAAATCCTAGTTTAAGGGCAGTCGAGATCCCGCGCCAATGGTACAATCTGGTTGCAGATCTTCCAGTTAAACCTCCTCCTAAATTGCATCCCAAAACTTTGGAACCAATCAGACCTGAAGACTTGTCCCCTCTCTTTTGCGACGAATTGATTAAGCAAGAGGCAAGTACTGATCGATATATAAACATCCCAGACGAAGTTGTCGACATCTACGGGCTTTGGCGCCCAACTCCTCTCATCAGAGCCAAGAGGTTAGAGAAGCTTCTTGACACACCGGCTCGAATTTACTACAAGTATGAAGGAGTTAGCCCTGCTGGGTCGCACAAAGCCAACTCTGCTGTTCCACAAGTCTGGTATAATGCACAGGCAGGTGTCAAGAATATTGTTACAGAAACTGGGGCTGGTCAATGGGGAAGCGCTTTGGCCTTTGCTTGTAGCTTATTCGATCTCGGCTGCGAGGTGTGGCAAGTGCGTGCGTCTTATGATCAAAAACCGTATCGACGACTGATGATGCAAACTTGGGGAGCGAAAGTACATCCATCTCCATCCGATCTCACGGACGCAGGCAGGAAATTGCTTCAAGTTGACCCGTCAAGCCCGGGAAGTTTAGGAATTGCCATTTCAGAAGCTGTGGAGGTTGCAGCTCAAAATGCTGATACCAAGTACTGTTTGGGAAGTGTTCTCGACCATGTTTTGCTCCACCAAACTGTCATCGGTGAAGAGTGTATAGAACAAATGAGAGCCTTAGGTGAGACCCCAGATGTCATCATAGGATGCACTGGTGGGGGTTCCAATTTTGCAGGTCTTAGCTTCCCGTTCCTTCGAGAGAAACTTGCTGGGAAAATAAGCCCTGTTATTAGAGCAGTTGAACCTGCAGCATGTCCTTCATTAACAAAAGGTGTTTATGCTTATGATTATGGCGATACGGCCAGGATGACTCCGTTGATGAAGATGCACACACTTGGTCACAACTTCATTCCTGACCCAATTCACGCCGGTGGATTACGGTATCATGGTATGTCTCCATTGATCTCACATGTCTACAATCTTGGTCTTATGGAAGCTATATCACTTCCCCAAACAGAATGCTTTCAAGGTGCTATACAATTTGCAAGAACTGAAGGACTAATACCAGCACCCGAGCCAACTCACGCCATAGCTGCAACTATCCGAGAGGCTCTTCGCTGTCGAGAAACTGGAGAATCAAAAGTTATTCTCACAGCCATGTGCGGGCACGGTCACTTCGACCTACCAGCTTATGAGAAGTACCTGCAAGGGGAGATGACAGATCTTTCTTTTACAGATGAGAAGATAAAAGAATCACTCACCAACATTCCTCAGGTGGCTTGA

Protein sequence

MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPRQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGETPDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLSFTDEKIKESLTNIPQVA

Homology

[Close]

BLAST of Sed0012629.1 vs. NCBI nr
Match: XP_022134316.1 (uncharacterized protein LOC111006607 [Momordica charantia])

HSP 1 Score: 918.7 bits (2373), Expect = 2.2e-263
Identity = 441/497 (88.73%), Postives = 471/497 (94.77%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPR 60
           MA+H+L   SS S AINGRVGE+L G LSLK+NPR+LRFSNG+R +AA N +L+ VE+PR
Sbjct: 1   MASHFLVAASSTSPAINGRVGEELPGRLSLKRNPRNLRFSNGYRTRAASNRNLKPVEVPR 60

Query: 61  QWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYG 120
           +WYNLVADLPVKPPP LHPKT +PI+P+DLSPLF D LI+QEASTDRYINIPDEVVDIYG
Sbjct: 61  RWYNLVADLPVKPPPPLHPKTFQPIKPQDLSPLFPDALIEQEASTDRYINIPDEVVDIYG 120

Query: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTET 180
           LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYN Q GVKN+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNVQEGVKNVVTET 180

Query: 181 GAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKL 240
           GAGQWGSALAFACS+F LGCEVWQVRASYDQKPYRRLMMQTWG KVHPSPSDLTDAGRKL
Sbjct: 181 GAGQWGSALAFACSIFGLGCEVWQVRASYDQKPYRRLMMQTWGVKVHPSPSDLTDAGRKL 240

Query: 241 LQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGET 300
           LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++QM ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARM 360
           PDVIIGCTGGGSNFAGLSFPFLREKLAGKI+P++RAVEPAACPSLTKGVYAYD+GDTA M
Sbjct: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKINPILRAVEPAACPSLTKGVYAYDFGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFAR 420
           TPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EAISLPQTECFQGAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLS 480
           +EGLI APEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG MTDLS
Sbjct: 421 SEGLIAAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGMTDLS 480

Query: 481 FTDEKIKESLTNIPQVA 498
           F +EKI+ESLT IPQVA
Sbjct: 481 FAEEKIQESLTTIPQVA 497

[Close]

BLAST of Sed0012629.1 vs. NCBI nr
Match: XP_031741291.1 (uncharacterized protein LOC101219640 [Cucumis sativus])

HSP 1 Score: 913.7 bits (2360), Expect = 7.0e-262
Identity = 441/497 (88.73%), Postives = 470/497 (94.57%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPR 60
           MAA +L VGS  SS+IN  VGEQL GCLSLK+ P HLRFSNG+R KAA NP+L+AVE+PR
Sbjct: 1   MAATFLTVGSLTSSSIN-NVGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKAVEVPR 60

Query: 61  QWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYG 120
           QWYNLVADLPVKPPP LHPKT EPI+PEDLS LF DELIKQEAST+RYINIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTET 180
           LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQVWYNAQ GVKN+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKL 240
           GAGQWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPSD+TDAGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDITDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGET 300
           LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++Q+ ALGET
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGET 300

Query: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARM 360
           PD+IIGCTGGGSNFAGLSFPFLREKLAG I+PVIRAVEPAACPSLTKGVYAYDYGDTA M
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFAR 420
           TPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EAISLPQTECFQGAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLS 480
           +EGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG ++DLS
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGISDLS 480

Query: 481 FTDEKIKESLTNIPQVA 498
           F +EKI+ESLT IPQVA
Sbjct: 481 FANEKIQESLTTIPQVA 496

[Close]

BLAST of Sed0012629.1 vs. NCBI nr
Match: XP_038890851.1 (tryptophan synthase beta chain 2 [Benincasa hispida])

HSP 1 Score: 912.5 bits (2357), Expect = 1.6e-261
Identity = 443/497 (89.13%), Postives = 470/497 (94.57%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAI-NGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIP 60
           MAA +LAVGS  SS I NGRVGEQL G LSLK+ PRHLRFSNG+R KAA NP+L+AVE+P
Sbjct: 1   MAATFLAVGSLTSSGINNGRVGEQLSGYLSLKRVPRHLRFSNGYRTKAASNPNLKAVEVP 60

Query: 61  RQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIY 120
           RQWYNLVADLPVKPPP LHPKTLEPI+PEDLS LF DELIKQEASTD+YINIPDEVVDIY
Sbjct: 61  RQWYNLVADLPVKPPPPLHPKTLEPIKPEDLSHLFPDELIKQEASTDQYINIPDEVVDIY 120

Query: 121 GLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTE 180
           GLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQV+YN Q GVKN+VTE
Sbjct: 121 GLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVYYNVQEGVKNVVTE 180

Query: 181 TGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRK 240
           TGAGQWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPSD+TDAGRK
Sbjct: 181 TGAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDMTDAGRK 240

Query: 241 LLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGE 300
            LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++QM ALGE
Sbjct: 241 FLQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGE 300

Query: 301 TPDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTAR 360
           +PDVIIGCTGGGSNFAGLSFPFLREKLAGKI+PVIRAVEPAACPSLTKGVYAYDYGDTA 
Sbjct: 301 SPDVIIGCTGGGSNFAGLSFPFLREKLAGKINPVIRAVEPAACPSLTKGVYAYDYGDTAG 360

Query: 361 MTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFA 420
           MTPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EAISLPQTECFQGAIQFA
Sbjct: 361 MTPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFA 420

Query: 421 RTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDL 480
           R+EGLIPAPEPTHAIAATI+EALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG +TDL
Sbjct: 421 RSEGLIPAPEPTHAIAATIQEALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGITDL 480

Query: 481 SFTDEKIKESLTNIPQV 497
           SF  EKI+ESL  IPQV
Sbjct: 481 SFAKEKIQESLITIPQV 497

[Close]

BLAST of Sed0012629.1 vs. NCBI nr
Match: XP_008459440.1 (PREDICTED: tryptophan synthase beta chain 2-like [Cucumis melo])

HSP 1 Score: 911.0 bits (2353), Expect = 4.5e-261
Identity = 439/497 (88.33%), Postives = 470/497 (94.57%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPR 60
           MAA +L VGS  SS+IN  VGEQL GCLSLK+ P HLRFSNG+R K+A NP+L+AVEIPR
Sbjct: 1   MAATFLTVGSLTSSSIN-NVGEQLPGCLSLKRVPTHLRFSNGYRTKSASNPNLKAVEIPR 60

Query: 61  QWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYG 120
           QWYNLVADLPVKPPP LHPKT EPI+PEDLS LF DELIKQEAST+RYINIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTET 180
           LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQVWYNAQ GVKN+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKL 240
           GAGQWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPSD+TDAGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDVTDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGET 300
           LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++Q+ ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARM 360
           PD+IIGCTGGGSNFAGLSFPFLREKLAG I+PVIRAVEPAACPSLTKGVYAYDYGDTA M
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFAR 420
           TPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EA+SLPQTECFQGAI+FAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAVSLPQTECFQGAIKFAR 420

Query: 421 TEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLS 480
           +EGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG +TDLS
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGITDLS 480

Query: 481 FTDEKIKESLTNIPQVA 498
           F +EK+KESLT IPQVA
Sbjct: 481 FANEKMKESLTTIPQVA 496

[Close]

BLAST of Sed0012629.1 vs. NCBI nr
Match: XP_022993275.1 (uncharacterized protein LOC111489338 [Cucurbita maxima])

HSP 1 Score: 893.6 bits (2308), Expect = 7.5e-256
Identity = 430/489 (87.93%), Postives = 458/489 (93.66%), Query Frame = 0


Query: 8   VGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPRQWYNLVA 67
           V SS SS ING       GCLS+++ PRHLRFSNG+R KAA NP+L+AVE+PRQWYNLVA
Sbjct: 2   VASSISSGINGG------GCLSIERIPRHLRFSNGYRTKAASNPNLKAVEVPRQWYNLVA 61

Query: 68  DLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYGLWRPTPL 127
           DLPVKPPP LHPKT EPI+PEDLSPLF DELIKQEAS +RYI+IPDEVVDIYGLWRPTPL
Sbjct: 62  DLPVKPPPPLHPKTFEPIKPEDLSPLFPDELIKQEASAERYIDIPDEVVDIYGLWRPTPL 121

Query: 128 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGS 187
           IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQVWYN Q GVKN+VTETGAGQWG 
Sbjct: 122 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNVQEGVKNVVTETGAGQWGC 181

Query: 188 ALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKLLQVDPSS 247
           +LAFACSLF +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPS++TD+GRK LQVDPSS
Sbjct: 182 SLAFACSLFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSNVTDSGRKFLQVDPSS 241

Query: 248 PGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGETPDVIIGC 307
           PGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++QM ALGETPDVIIGC
Sbjct: 242 PGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGETPDVIIGC 301

Query: 308 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMH 367
           TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTA MTPLMKMH
Sbjct: 302 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMH 361

Query: 368 TLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPA 427
           TLGHNFIPDPIHAGGLRYHGM+PLISHVY+LGL+EA+SLPQTECFQGAIQFAR+EGLIPA
Sbjct: 362 TLGHNFIPDPIHAGGLRYHGMAPLISHVYDLGLLEAVSLPQTECFQGAIQFARSEGLIPA 421

Query: 428 PEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLSFTDEKIK 487
           PEPTHAIA TIREALRCRETGESKVILTAMCGHGHFDL AYEKYLQG MTDLSF +EKIK
Sbjct: 422 PEPTHAIAETIREALRCRETGESKVILTAMCGHGHFDLAAYEKYLQGGMTDLSFAEEKIK 481

Query: 488 ESLTNIPQV 497
           ESLT IPQ+
Sbjct: 482 ESLTTIPQL 484

[Close]

BLAST of Sed0012629.1 vs. ExPASy Swiss-Prot
Match: O67409 (Tryptophan synthase beta chain 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 1.5e-153
Identity = 260/425 (61.18%), Postives = 323/425 (76.00%), Query Frame = 0


Query: 57  EIPRQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVV 116
           EIP++W N++  LP    P L P+T+EP++PE L  +F + L++QE S   +I+IP+EV+
Sbjct: 10  EIPKKWLNILPLLPEPLEPPLDPETMEPVKPEKLLAIFPEPLVEQEVSDKEWIDIPEEVL 69

Query: 117 DIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNI 176
           DIY LWRPTPL RAK LE+ L TPA+I+YK E VSP GSHK N+AV Q +YN  +GVK +
Sbjct: 70  DIYSLWRPTPLHRAKNLEEFLGTPAKIFYKNESVSPPGSHKPNTAVAQAYYNKISGVKRL 129

Query: 177 VTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDA 236
            TETGAGQWGSAL+FA   FDL C V+ VR SY+QKPYRR++M+TW  +V PSPS  T+A
Sbjct: 130 TTETGAGQWGSALSFATQFFDLQCRVYMVRVSYNQKPYRRILMETWKGEVIPSPSPYTNA 189

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRA 296
           GRK  + +P  PGSLGIAISEA+E AA   DTKY LGSVL+HVLLHQTVIG E  +QM  
Sbjct: 190 GRKYYEENPEHPGSLGIAISEAIEEAASREDTKYSLGSVLNHVLLHQTVIGLEAKKQMEE 249

Query: 297 LGETPDVIIGCTGGGSNFAGLSFPFLREKLAG---KISPVIRAVEPAACPSLTKGVYAYD 356
            G  PDVIIG  GGGSNFAGLSFPFL + L G   K    + AVEP ACP+LTKG Y YD
Sbjct: 250 AGYYPDVIIGAVGGGSNFAGLSFPFLADVLRGDKRKEDLKVLAVEPEACPTLTKGEYKYD 309

Query: 357 YGDTARMTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQ 416
           +GD+  +TPL+KM+TLGH+F+P PIHAGGLRYHG +PL+  +YNLG ++A++  QTE F+
Sbjct: 310 FGDSVGLTPLIKMYTLGHDFVPSPIHAGGLRYHGDAPLVCKLYNLGYIDAVAYKQTEVFE 369

Query: 417 GAIQFARTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQ 476
            A+ FARTEG++PAPE  HAI A I EAL+C+ETGE KVIL  + GHG+FDL AY+KYL 
Sbjct: 370 AAVTFARTEGIVPAPESAHAIKAAIDEALKCKETGEEKVILFNLSGHGYFDLSAYDKYLH 429

Query: 477 GEMTD 479
           GE+TD
Sbjct: 430 GELTD 434

[Close]

BLAST of Sed0012629.1 vs. ExPASy Swiss-Prot
Match: Q8Q001 (Tryptophan synthase beta chain 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.6e-152
Identity = 252/420 (60.00%), Postives = 321/420 (76.43%), Query Frame = 0


Query: 57  EIPRQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVV 116
           E+P++WYN+++DLP    P L P+T +PI PE L P+F  ELI+QE S+DRYI+IP E++
Sbjct: 22  EMPKRWYNVLSDLPSPIDPPLDPRTWQPINPEALEPIFAKELIRQEMSSDRYIDIPAEIL 81

Query: 117 DIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNI 176
           D+Y LWRP+PL RA +LEK L TPA+IYYKYEGVSPAGSHK N+++ Q +YN + G + +
Sbjct: 82  DVYRLWRPSPLFRAHQLEKDLKTPAKIYYKYEGVSPAGSHKTNTSIAQAYYNMKEGTERL 141

Query: 177 VTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDA 236
            TETGAGQWGSAL+ AC+ FDL C+V+ VR+SY QKPYR+ +M  WG  V PSPS  T+ 
Sbjct: 142 TTETGAGQWGSALSLACNYFDLECKVYMVRSSYYQKPYRKSLMTLWGGNVVPSPSPDTEF 201

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRA 296
           GRK+L+  P +PGSLGIAISEAVE A  + +TKY LGSVL+HV+LHQTVIG EC +Q+  
Sbjct: 202 GRKILKEQPDTPGSLGIAISEAVEDAIAHDNTKYTLGSVLNHVVLHQTVIGAECKKQLEQ 261

Query: 297 LGETPDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGD 356
           + E PDV+IGC GGGSN  G+   F++++L GK +  + AVEP+ACPSLTKG Y YD+GD
Sbjct: 262 VEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHNARVVAVEPSACPSLTKGEYRYDFGD 321

Query: 357 TARMTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAI 416
           TA MTPL+KM+TLGH  IP  IHAGGLRYHG SP+IS +   GLMEA+S  Q E F  A+
Sbjct: 322 TAEMTPLLKMYTLGHKHIPPAIHAGGLRYHGDSPIISKLCAEGLMEAVSYGQKEVFDAAV 381

Query: 417 QFARTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEM 476
           QFARTEG++PAPE +HAI   I EAL  ++ GE KVIL  + GHGHFD+ +Y+KY  GE+
Sbjct: 382 QFARTEGIVPAPESSHAIRCAIDEALEAKQKGEEKVILFNLSGHGHFDMASYDKYFSGEL 441

[Close]

BLAST of Sed0012629.1 vs. ExPASy Swiss-Prot
Match: Q8TL44 (Tryptophan synthase beta chain 2 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 3.6e-152
Identity = 250/420 (59.52%), Postives = 322/420 (76.67%), Query Frame = 0


Query: 57  EIPRQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVV 116
           E+P++WYN++ADLP    P L P+T +PI P+ L P+F   LI QE S+DRYI+IP+EV+
Sbjct: 22  EMPKKWYNVLADLPSPIDPPLDPRTWQPISPDALEPIFPKALIMQEMSSDRYIDIPEEVL 81

Query: 117 DIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNI 176
           D+Y LWRP+PL RA +LEK+L +PA+IYYKYEGVSPAGSHK N+++ Q +YN + G + +
Sbjct: 82  DVYRLWRPSPLFRAHQLEKVLKSPAKIYYKYEGVSPAGSHKTNTSIAQAYYNMKEGTERL 141

Query: 177 VTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDA 236
            TETGAGQWGSAL+ AC+ FDL C+V+ VR+S+ QKPYR+ ++  WG  V PSPS  T+ 
Sbjct: 142 TTETGAGQWGSALSLACNYFDLECKVYMVRSSFYQKPYRKSLITLWGGNVVPSPSPDTEF 201

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRA 296
           GRK+LQ  P +PGSLGIAISEAVE A  + +TKY LGSVL+HV+LHQTVIG EC +Q+  
Sbjct: 202 GRKILQEQPDTPGSLGIAISEAVEDAIAHENTKYSLGSVLNHVVLHQTVIGAECKQQLAQ 261

Query: 297 LGETPDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGD 356
           + E PDV+IGC GGGSN  G+   F++++L GK S  + AVEP+ACPSLTKG Y YD+GD
Sbjct: 262 VEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHSARVVAVEPSACPSLTKGEYRYDFGD 321

Query: 357 TARMTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAI 416
           TA MTPL+KM+TLGH  +P  IHAGGLRYHG SP+IS + + GLMEA+S  Q E F  A+
Sbjct: 322 TAEMTPLLKMYTLGHKHVPPAIHAGGLRYHGDSPIISKLCSEGLMEAVSYDQQEVFDAAV 381

Query: 417 QFARTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEM 476
           QFARTEG++PAPE +HAI   I EAL  ++TGE K IL  + GHGHFD+ +Y+KY  GE+
Sbjct: 382 QFARTEGIVPAPESSHAIRCAIDEALAAKQTGEEKTILFNLSGHGHFDMSSYDKYFSGEL 441

[Close]

BLAST of Sed0012629.1 vs. ExPASy Swiss-Prot
Match: O29028 (Tryptophan synthase beta chain 2 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.2e-149
Identity = 249/422 (59.00%), Postives = 319/422 (75.59%), Query Frame = 0


Query: 57  EIPRQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVV 116
           E+P++WYN++ DLP   PP LHP T EP++PEDL P+F   LI+QE S +R+I IP++V 
Sbjct: 15  EMPKEWYNVLPDLPEPLPPPLHPATQEPVKPEDLEPIFPKGLIQQEMSGERWIRIPEDVR 74

Query: 117 DIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNI 176
           +IY +WRPTPL+RA+RLEK L TPARIY+KYEG SP GSHK N+AV Q +YNA+ GV+ +
Sbjct: 75  EIYRIWRPTPLVRAERLEKALKTPARIYFKYEGASPPGSHKPNTAVAQAYYNAKEGVERL 134

Query: 177 VTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDA 236
            TETGAGQWGSAL FA  LF++ C V+ V+ S+ QKPYRR+MM+TWG +V PSPSD T+ 
Sbjct: 135 TTETGAGQWGSALCFATKLFEMACTVYMVKVSFMQKPYRRVMMETWGGEVIPSPSDRTEV 194

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRA 296
           GRK+L  +P +PGSLGIAISEA+E AA+N +TKY LGSVL+HVLLHQTVIG E   Q+  
Sbjct: 195 GRKILAENPDTPGSLGIAISEAIEDAAKNENTKYSLGSVLNHVLLHQTVIGLETKAQLEK 254

Query: 297 LGETPDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGD 356
           + E PDV+IGC GGGSNFAGL++PF+ +   G +   I AVEPAACP+LT G Y YD+GD
Sbjct: 255 VDEKPDVLIGCVGGGSNFAGLTYPFVNDAKNGDLE--IIAVEPAACPTLTAGEYKYDFGD 314

Query: 357 TARMTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAI 416
            A +TPL+KM+TLGH+FIP PIHAGGLRYHG +P +  +   G+++A ++ Q   F+  +
Sbjct: 315 VAGLTPLLKMYTLGHDFIPPPIHAGGLRYHGDAPTLCMLVKHGVIKARAVKQLPTFEAGL 374

Query: 417 QFARTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEM 476
            FARTEG+IPAPE  HA+ A I EA++ RE  E KVI+    GHG  DL AY+ YL G +
Sbjct: 375 LFARTEGIIPAPETNHAVRAAIDEAIKARENNEEKVIVFGFSGHGLLDLQAYDDYLAGRL 434

Query: 477 TD 479
            D
Sbjct: 435 AD 434

[Close]

BLAST of Sed0012629.1 vs. ExPASy Swiss-Prot
Match: Q9WZ09 (Tryptophan synthase beta chain 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.9e-137
Identity = 241/417 (57.79%), Postives = 308/417 (73.86%), Query Frame = 0


Query: 52  SLRAVEIPRQWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINI 111
           +L+  EIP+ WYN++ADLP K  P L P+T +PI PE LS +F   LI+QE S +R+I I
Sbjct: 6   NLKPEEIPKHWYNVLADLPFKLDPPLDPETKQPISPEKLSVIFPMSLIEQEVSEERFIEI 65

Query: 112 PDEVVDIYGLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQA 171
           P+ V+  Y ++RPTPLIRA  LE+ L TPARIYYKYEGVSP GSHK N+A+ Q +YN   
Sbjct: 66  PEPVLKEYAVYRPTPLIRATFLEEYLQTPARIYYKYEGVSPTGSHKPNTAIAQAYYNKIE 125

Query: 172 GVKNIVTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPS 231
           GVK +VTETGAGQWGSAL++A + F L  +V+ V+ SY QKP R+ MM  +G KV PSPS
Sbjct: 126 GVKRLVTETGAGQWGSALSYAGAKFGLEVKVFMVKVSYQQKPMRKYMMNLFGGKVTPSPS 185

Query: 232 DLTDAGRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECI 291
           + T+ GRK+L  DP +PGSLGIAISEA+EVA  + +TKY LGSVL+HVLLHQTVIG E  
Sbjct: 186 EETNFGRKILSEDPDNPGSLGIAISEALEVAVSDPNTKYSLGSVLNHVLLHQTVIGLEIK 245

Query: 292 EQMRALGETPDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYA 351
           +Q+  +GE PD+++GC GGGSNF G   PF+ +KL+G+    + A EPAACPSLTKG Y 
Sbjct: 246 KQLELIGEKPDILLGCHGGGSNFGGTILPFVPDKLSGRDIRFV-ACEPAACPSLTKGNYD 305

Query: 352 YDYGDTARMTPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTEC 411
           YD+GDTA +TPL+KM+TLG +FIP  IHAGGLRYHG +P+I+ +   GL+EA +  Q E 
Sbjct: 306 YDFGDTAGLTPLLKMYTLGKDFIPPKIHAGGLRYHGSAPIIARLVKEGLVEAQAFDQDET 365

Query: 412 FQGAIQFARTEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAY 469
           F+ A  FA+ EG+IPAPE  HAIA  IREA + +E G+ +VI+  + GHG  DL AY
Sbjct: 366 FEAAKIFAKLEGIIPAPESAHAIAGAIREAKKAKEEGKERVIVFTLSGHGLLDLTAY 421

[Close]

BLAST of Sed0012629.1 vs. ExPASy TrEMBL
Match: A0A6J1BXI7 (Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111006607 PE=3 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.0e-263
Identity = 441/497 (88.73%), Postives = 471/497 (94.77%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPR 60
           MA+H+L   SS S AINGRVGE+L G LSLK+NPR+LRFSNG+R +AA N +L+ VE+PR
Sbjct: 1   MASHFLVAASSTSPAINGRVGEELPGRLSLKRNPRNLRFSNGYRTRAASNRNLKPVEVPR 60

Query: 61  QWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYG 120
           +WYNLVADLPVKPPP LHPKT +PI+P+DLSPLF D LI+QEASTDRYINIPDEVVDIYG
Sbjct: 61  RWYNLVADLPVKPPPPLHPKTFQPIKPQDLSPLFPDALIEQEASTDRYINIPDEVVDIYG 120

Query: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTET 180
           LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYN Q GVKN+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNVQEGVKNVVTET 180

Query: 181 GAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKL 240
           GAGQWGSALAFACS+F LGCEVWQVRASYDQKPYRRLMMQTWG KVHPSPSDLTDAGRKL
Sbjct: 181 GAGQWGSALAFACSIFGLGCEVWQVRASYDQKPYRRLMMQTWGVKVHPSPSDLTDAGRKL 240

Query: 241 LQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGET 300
           LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++QM ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARM 360
           PDVIIGCTGGGSNFAGLSFPFLREKLAGKI+P++RAVEPAACPSLTKGVYAYD+GDTA M
Sbjct: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKINPILRAVEPAACPSLTKGVYAYDFGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFAR 420
           TPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EAISLPQTECFQGAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLS 480
           +EGLI APEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG MTDLS
Sbjct: 421 SEGLIAAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGMTDLS 480

Query: 481 FTDEKIKESLTNIPQVA 498
           F +EKI+ESLT IPQVA
Sbjct: 481 FAEEKIQESLTTIPQVA 497

[Close]

BLAST of Sed0012629.1 vs. ExPASy TrEMBL
Match: A0A0A0KUJ4 (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_5G643330 PE=3 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.5e-262
Identity = 440/497 (88.53%), Postives = 470/497 (94.57%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPR 60
           MAA +L VGS  SS+IN  VGEQL GCLSLK+ P HLRFSNG+R KAA NP+L++VE+PR
Sbjct: 1   MAATFLTVGSLTSSSIN-NVGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKSVEVPR 60

Query: 61  QWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYG 120
           QWYNLVADLPVKPPP LHPKT EPI+PEDLS LF DELIKQEAST+RYINIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTET 180
           LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQVWYNAQ GVKN+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKL 240
           GAGQWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPSD+TDAGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDITDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGET 300
           LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++Q+ ALGET
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGET 300

Query: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARM 360
           PD+IIGCTGGGSNFAGLSFPFLREKLAG I+PVIRAVEPAACPSLTKGVYAYDYGDTA M
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFAR 420
           TPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EAISLPQTECFQGAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLS 480
           +EGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG ++DLS
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGISDLS 480

Query: 481 FTDEKIKESLTNIPQVA 498
           F +EKI+ESLT IPQVA
Sbjct: 481 FANEKIQESLTTIPQVA 496

[Close]

BLAST of Sed0012629.1 vs. ExPASy TrEMBL
Match: A0A1S3CA62 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103498574 PE=3 SV=1)

HSP 1 Score: 911.0 bits (2353), Expect = 2.2e-261
Identity = 439/497 (88.33%), Postives = 470/497 (94.57%), Query Frame = 0


Query: 1   MAAHYLAVGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPR 60
           MAA +L VGS  SS+IN  VGEQL GCLSLK+ P HLRFSNG+R K+A NP+L+AVEIPR
Sbjct: 1   MAATFLTVGSLTSSSIN-NVGEQLPGCLSLKRVPTHLRFSNGYRTKSASNPNLKAVEIPR 60

Query: 61  QWYNLVADLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYG 120
           QWYNLVADLPVKPPP LHPKT EPI+PEDLS LF DELIKQEAST+RYINIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTET 180
           LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQVWYNAQ GVKN+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKL 240
           GAGQWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPSD+TDAGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDVTDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGET 300
           LQVDPSSPGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++Q+ ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARM 360
           PD+IIGCTGGGSNFAGLSFPFLREKLAG I+PVIRAVEPAACPSLTKGVYAYDYGDTA M
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFAR 420
           TPLMKMHTLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EA+SLPQTECFQGAI+FAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAVSLPQTECFQGAIKFAR 420

Query: 421 TEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLS 480
           +EGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQG +TDLS
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGITDLS 480

Query: 481 FTDEKIKESLTNIPQVA 498
           F +EK+KESLT IPQVA
Sbjct: 481 FANEKMKESLTTIPQVA 496

[Close]

BLAST of Sed0012629.1 vs. ExPASy TrEMBL
Match: A0A6J1JY44 (Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111489338 PE=3 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 3.6e-256
Identity = 430/489 (87.93%), Postives = 458/489 (93.66%), Query Frame = 0


Query: 8   VGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPRQWYNLVA 67
           V SS SS ING       GCLS+++ PRHLRFSNG+R KAA NP+L+AVE+PRQWYNLVA
Sbjct: 2   VASSISSGINGG------GCLSIERIPRHLRFSNGYRTKAASNPNLKAVEVPRQWYNLVA 61

Query: 68  DLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYGLWRPTPL 127
           DLPVKPPP LHPKT EPI+PEDLSPLF DELIKQEAS +RYI+IPDEVVDIYGLWRPTPL
Sbjct: 62  DLPVKPPPPLHPKTFEPIKPEDLSPLFPDELIKQEASAERYIDIPDEVVDIYGLWRPTPL 121

Query: 128 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGS 187
           IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQVWYN Q GVKN+VTETGAGQWG 
Sbjct: 122 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNVQEGVKNVVTETGAGQWGC 181

Query: 188 ALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKLLQVDPSS 247
           +LAFACSLF +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPS++TD+GRK LQVDPSS
Sbjct: 182 SLAFACSLFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSNVTDSGRKFLQVDPSS 241

Query: 248 PGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGETPDVIIGC 307
           PGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++QM ALGETPDVIIGC
Sbjct: 242 PGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGETPDVIIGC 301

Query: 308 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMH 367
           TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTA MTPLMKMH
Sbjct: 302 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMH 361

Query: 368 TLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPA 427
           TLGHNFIPDPIHAGGLRYHGM+PLISHVY+LGL+EA+SLPQTECFQGAIQFAR+EGLIPA
Sbjct: 362 TLGHNFIPDPIHAGGLRYHGMAPLISHVYDLGLLEAVSLPQTECFQGAIQFARSEGLIPA 421

Query: 428 PEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLSFTDEKIK 487
           PEPTHAIA TIREALRCRETGESKVILTAMCGHGHFDL AYEKYLQG MTDLSF +EKIK
Sbjct: 422 PEPTHAIAETIREALRCRETGESKVILTAMCGHGHFDLAAYEKYLQGGMTDLSFAEEKIK 481

Query: 488 ESLTNIPQV 497
           ESLT IPQ+
Sbjct: 482 ESLTTIPQL 484

[Close]

BLAST of Sed0012629.1 vs. ExPASy TrEMBL
Match: A0A6J1FH74 (Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111445435 PE=3 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.8e-255
Identity = 430/489 (87.93%), Postives = 456/489 (93.25%), Query Frame = 0


Query: 8   VGSSASSAINGRVGEQLLGCLSLKKNPRHLRFSNGFRAKAALNPSLRAVEIPRQWYNLVA 67
           V S  SS ING       GCLSL++ PRHLRFSNG+R KAA NP+L+AVE+PRQWYNLVA
Sbjct: 2   VASLISSGINGG------GCLSLERIPRHLRFSNGYRTKAASNPNLKAVEVPRQWYNLVA 61

Query: 68  DLPVKPPPKLHPKTLEPIRPEDLSPLFCDELIKQEASTDRYINIPDEVVDIYGLWRPTPL 127
           DLPVKPPP LHPKT EPI+PEDLSPLF DELIKQEAS +RYI+IPDEVVDIYGLWRPTPL
Sbjct: 62  DLPVKPPPPLHPKTFEPIKPEDLSPLFPDELIKQEASAERYIDIPDEVVDIYGLWRPTPL 121

Query: 128 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGS 187
           IRAKRLEKLL TPARIYYKYEGVSPAGSHK NSAVPQVWYN Q GVKN+VTETGAGQWG 
Sbjct: 122 IRAKRLEKLLGTPARIYYKYEGVSPAGSHKPNSAVPQVWYNVQEGVKNVVTETGAGQWGC 181

Query: 188 ALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKLLQVDPSS 247
           +LAFACSLF +GCEVWQVRASYDQKPYRR+MM+TWGAKVHPSPS++TD+GRK LQVDPSS
Sbjct: 182 SLAFACSLFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSNVTDSGRKFLQVDPSS 241

Query: 248 PGSLGIAISEAVEVAAQNADTKYCLGSVLDHVLLHQTVIGEECIEQMRALGETPDVIIGC 307
           PGSLGIAISEAVEVAA NADTKYCLGSVL+HVLLHQTVIGEEC++QM ALGETPDVIIGC
Sbjct: 242 PGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGETPDVIIGC 301

Query: 308 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMH 367
           TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTA MTPLMKMH
Sbjct: 302 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMH 361

Query: 368 TLGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPA 427
           TLGHNFIPDPIHAGGLRYHGM+PLISHVYNLGL+EA+SLPQTECFQGAIQFAR+EGLIPA
Sbjct: 362 TLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAVSLPQTECFQGAIQFARSEGLIPA 421

Query: 428 PEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLSFTDEKIK 487
           PEPTHAIA TIREALRCRETGESKVILTAMCGHGHFDL AYEKYLQG MTDLSF +EKIK
Sbjct: 422 PEPTHAIAETIREALRCRETGESKVILTAMCGHGHFDLAAYEKYLQGGMTDLSFAEEKIK 481

Query: 488 ESLTNIPQV 497
           ESLT IPQ+
Sbjct: 482 ESLTTIPQL 484

[Close]

BLAST of Sed0012629.1 vs. TAIR 10
Match: AT5G38530.1 (tryptophan synthase beta type 2 )

HSP 1 Score: 773.1 bits (1995), Expect = 1.4e-223
Identity = 370/470 (78.72%), Postives = 420/470 (89.36%), Query Frame = 0


Query: 31  KKNPRHLRFSNG--FRAKAALNP--SLRAVEIPRQWYNLVADLPVKPPPKLHPKTLEPIR 90
           +K+ +  R SNG   R KAAL    +   VEIP+QWYNLVADL VKPPP LHPKT EPI+
Sbjct: 36  RKSNQATRVSNGSSLRVKAALRSTHNKSVVEIPKQWYNLVADLSVKPPPPLHPKTFEPIK 95

Query: 91  PEDLSPLFCDELIKQEASTDRYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPARIYYK 150
           PEDL+ LF +ELIKQEA+ +R+I+IP+EV++IY LWRPTPLIRAKRLEKLL TPARIY+K
Sbjct: 96  PEDLAHLFPNELIKQEATQERFIDIPEEVLEIYKLWRPTPLIRAKRLEKLLQTPARIYFK 155

Query: 151 YEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGSALAFACSLFDLGCEVWQVR 210
           YEG SPAGSHK N+AVPQ +YNA+ GVKN+VTETGAGQWGS+LAFA SLF L CEVWQV 
Sbjct: 156 YEGGSPAGSHKPNTAVPQAYYNAKEGVKNVVTETGAGQWGSSLAFASSLFGLDCEVWQVA 215

Query: 211 ASYDQKPYRRLMMQTWGAKVHPSPSDLTDAGRKLLQVDPSSPGSLGIAISEAVEVAAQNA 270
            SY  KPYRRLMMQTWGAKVHPSPSDLT+AGR++L+ DPSSPGSLGIAISEAVEVAA+N 
Sbjct: 216 NSYHTKPYRRLMMQTWGAKVHPSPSDLTEAGRRILESDPSSPGSLGIAISEAVEVAARNE 275

Query: 271 DTKYCLGSVLDHVLLHQTVIGEECIEQMRALGETPDVIIGCTGGGSNFAGLSFPFLREKL 330
           DTKYCLGSVL+HVLLHQT+IGEECI+QM   GETPD+IIGCTGGGSNFAGLSFPF+REKL
Sbjct: 276 DTKYCLGSVLNHVLLHQTIIGEECIQQMENFGETPDLIIGCTGGGSNFAGLSFPFIREKL 335

Query: 331 AGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMHTLGHNFIPDPIHAGGLRYH 390
            GKI+PVIRAVEP+ACPSLTKGVYAYD+GDTA +TPLMKMHTLGH+FIPDPIHAGGLRYH
Sbjct: 336 KGKINPVIRAVEPSACPSLTKGVYAYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYH 395

Query: 391 GMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPAPEPTHAIAATIREALRCRE 450
           GM+PLISHVY  G MEAIS+PQ ECFQGAIQFARTEG+IPAPEPTHAIAATIREALRC+E
Sbjct: 396 GMAPLISHVYEQGFMEAISIPQIECFQGAIQFARTEGIIPAPEPTHAIAATIREALRCKE 455

Query: 451 TGESKVILTAMCGHGHFDLPAYEKYLQGEMTDLSFTDEKIKESLTNIPQV 497
           TGE+KVIL AMCGHGHFDL +Y+KYL+GE+ DLSF++EKI+ESL+ +P V
Sbjct: 456 TGEAKVILMAMCGHGHFDLTSYDKYLKGELVDLSFSEEKIRESLSKVPHV 505

[Close]

BLAST of Sed0012629.1 vs. TAIR 10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 120.2 bits (300), Expect = 4.8e-27
Identity = 101/336 (30.06%), Postives = 151/336 (44.94%), Query Frame = 0


Query: 123 RPTPLIRAKRLEK-------LLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKN 182
           R TPL  A+RL +        ++    IY K E +S  GSHK N+A+ Q   + + G   
Sbjct: 118 RETPLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAMISRRLGCSR 177

Query: 183 IVTETGAGQWGSALAFACSLFDLGCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDLTD 242
           +V  TGAGQ G A A AC+   L C V+   A  +++ +  L M+  GA+V         
Sbjct: 178 VVAATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQV--------- 237

Query: 243 AGRKLLQVDPSSPGSLGIAISEAVEVAAQNADTKYCL-GSVLDH------VLLHQTVIGE 302
                     S  G+   A SEA+    +N  T Y L G+V+        V   Q+VIG+
Sbjct: 238 ---------ISVEGTFKDASSEAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGK 297

Query: 303 ECIEQMRAL-GETPDVIIGCTGGGSNFAGLSFPFLRE---KLAGKISPVIRAVEPAACPS 362
           E   Q + L G  PDV++ C G GSN  GL   F+ +   +L G  +  +         +
Sbjct: 298 ETRRQAKQLWGGKPDVLVACVGSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSAT 357

Query: 363 LTKGVYAYDYGDTARMT-----PLMKMHTLGHNFIPDPIHAGGLRYHGMSPLISHVYNLG 422
           L  G     +G  + +       ++K H++G           GL Y G+ P IS +   G
Sbjct: 358 LAFGDVGVYHGSMSYLLQDDQGQILKPHSVG----------VGLEYPGVGPEISFMKETG 417

Query: 423 LMEAISLPQTECFQGAIQFARTEGLIPAPEPTHAIA 436
             E  +    E  Q  ++ +R EG+IPA E +HA+A
Sbjct: 418 RAEFYTATDEEAIQACMRLSRLEGIIPALEASHALA 425

[Close]

BLAST of Sed0012629.1 vs. TAIR 10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1 )

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-26
Identity = 102/344 (29.65%), Postives = 146/344 (42.44%), Query Frame = 0


Query: 143 IYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGSALAFACSLFDLGCEV 202
           IY K E ++  G+HK N+AV Q     + G K I+ ETGAGQ G A A  C+ F L C +
Sbjct: 151 IYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECII 210

Query: 203 WQVRASYDQKPYRRLMMQTWGAK---VHPSPSDLTDAGRKLLQVDPSSPGSLGIAISEAV 262
           +      +++      M+  GA+   VH   + L D                  A SEA+
Sbjct: 211 YMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKD------------------ATSEAI 270

Query: 263 EVAAQNAD-TKYCLGSVLD------HVLLHQTVIGEECIEQ-MRALGETPDVIIGCTGGG 322
                N + T Y LGSV         V     VIG+E  +Q +   G  PDV++ C GGG
Sbjct: 271 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGG 330

Query: 323 SNFAGLSFPFLRE---KLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMHT 382
           SN  GL   F+ +   ++ G  +            +LTKG    D G        +    
Sbjct: 331 SNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKG----DVGVLHGAMSYLLQDD 390

Query: 383 LGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPAP 442
            G    P  I A GL Y G+ P  S   ++G  E  S+   E  +   + +R EG+IPA 
Sbjct: 391 DGQIIEPHSISA-GLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPAL 450

Query: 443 EPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYL 473
           E +HA+A   +    C    +   ++    G G  D+    KYL
Sbjct: 451 ETSHALAYLEK---LCPTLSDGTRVVLNFSGRGDKDVQTVAKYL 468

[Close]

BLAST of Sed0012629.1 vs. TAIR 10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2 )

HSP 1 Score: 116.3 bits (290), Expect = 7.0e-26
Identity = 103/345 (29.86%), Postives = 148/345 (42.90%), Query Frame = 0


Query: 143 IYYKYEGVSPAGSHKANSAVPQVWYNAQAGVKNIVTETGAGQWGSALAFACSLFDLGCEV 202
           IY K E ++  G+HK N+AV Q     + G K I+ ETGAGQ G A A  C+ F L C +
Sbjct: 156 IYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCII 215

Query: 203 WQVRASYDQKPYRRLMMQTWGAK---VHPSPSDLTDAGRKLLQVDPSSPGSLGIAISEAV 262
           +      +++      M+  GA+   VH   + L D                  A SEA+
Sbjct: 216 YMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKD------------------ATSEAI 275

Query: 263 EVAAQNAD-TKYCLGSVLD------HVLLHQTVIGEECIEQ-MRALGETPDVIIGCTGGG 322
                N + T Y LGSV         V     VIG+E  +Q M   G  PDV++ C GGG
Sbjct: 276 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGG 335

Query: 323 SNFAGLSFPFLRE---KLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTARMTPLMKMHT 382
           SN  GL   F+ +   ++ G  +            +LTKG    D G        +    
Sbjct: 336 SNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKG----DVGVLHGAMSYLLQDD 395

Query: 383 LGHNFIPDPIHAGGLRYHGMSPLISHVYNLGLMEAISLPQTECFQGAIQFARTEGLIPAP 442
            G    P  I A GL Y G+ P  S + ++G  E  S+   E  +   + +R EG+IPA 
Sbjct: 396 DGQIIEPHSISA-GLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPAL 455

Query: 443 EPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQ 474
           E +HA+A   +    C    +   ++    G G  D+    KYL+
Sbjct: 456 ETSHALAHLEK---LCPTLPDGARVVLNFSGRGDKDVQTAIKYLE 474

The following BLAST results are available for this feature:

BLAST of Sed0012629.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134316.1	2.2e-263	88.73	uncharacterized protein LOC111006607 [Momordica charantia]	[more]
XP_031741291.1	7.0e-262	88.73	uncharacterized protein LOC101219640 [Cucumis sativus]	[more]
XP_038890851.1	1.6e-261	89.13	tryptophan synthase beta chain 2 [Benincasa hispida]	[more]
XP_008459440.1	4.5e-261	88.33	PREDICTED: tryptophan synthase beta chain 2-like [Cucumis melo]	[more]
XP_022993275.1	7.5e-256	87.93	uncharacterized protein LOC111489338 [Cucurbita maxima]	[more]

BLAST of Sed0012629.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O67409	1.5e-153	61.18	Tryptophan synthase beta chain 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=t...	[more]
Q8Q001	1.6e-152	60.00	Tryptophan synthase beta chain 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / ...	[more]
Q8TL44	3.6e-152	59.52	Tryptophan synthase beta chain 2 OS=Methanosarcina acetivorans (strain ATCC 3539...	[more]
O29028	2.2e-149	59.00	Tryptophan synthase beta chain 2 OS=Archaeoglobus fulgidus (strain ATCC 49558 / ...	[more]
Q9WZ09	1.9e-137	57.79	Tryptophan synthase beta chain 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM...	[more]

BLAST of Sed0012629.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXI7	1.0e-263	88.73	Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111006607 PE=3 SV=1	[more]
A0A0A0KUJ4	7.5e-262	88.53	Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_5G643330 PE=3 SV=1	[more]
A0A1S3CA62	2.2e-261	88.33	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103498574 PE=3 SV=1	[more]
A0A6J1JY44	3.6e-256	87.93	Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111489338 PE=3 SV=1	[more]
A0A6J1FH74	1.8e-255	87.93	Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111445435 PE=3 SV=1	[more]

BLAST of Sed0012629.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38530.1	1.4e-223	78.72	tryptophan synthase beta type 2	[more]
AT5G28237.1	4.8e-27	30.06	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT5G54810.1	5.3e-26	29.65	tryptophan synthase beta-subunit 1	[more]
AT4G27070.1	7.0e-26	29.86	tryptophan synthase beta-subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 123..465 e-value: 4.2E-148 score: 495.4
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 74..284 e-value: 4.2E-148 score: 495.4
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 75..471
IPR023026	Tryptophan synthase beta chain/beta chain-like	PIRSF	PIRSF001413	Trp_syn_beta	coord: 54..478 e-value: 2.1E-115 score: 384.1
IPR023026	Tryptophan synthase beta chain/beta chain-like	HAMAP	MF_00133	Trp_synth_beta	coord: 66..472 score: 38.41293
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 121..459 e-value: 9.4E-42 score: 143.4
IPR006316	Tryptophan synthase, beta chain-like	TIGRFAM	TIGR01415	TIGR01415	coord: 58..474 e-value: 4.0E-190 score: 629.9
IPR006316	Tryptophan synthase, beta chain-like	PIRSF	PIRSF500824	TrpB_prok	coord: 47..481 e-value: 2.0E-195 score: 647.3
IPR006316	Tryptophan synthase, beta chain-like	PANTHER	PTHR48077:SF6	TRYPTOPHAN SYNTHASE BETA CHAIN	coord: 51..496
None	No IPR available	PANTHER	PTHR48077	TRYPTOPHAN SYNTHASE-RELATED	coord: 51..496
IPR006653	Tryptophan synthase, beta chain, conserved site	PROSITE	PS00168	TRP_SYNTHASE_BETA	coord: 150..164
IPR006654	Tryptophan synthase, beta chain	CDD	cd06446	Trp-synth_B	coord: 94..468 e-value: 4.30242E-175 score: 494.747

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0012629	Sed0012629	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0012629.1-five_prime_utr	Sed0012629.1-five_prime_utr-LG03:1801649..1801665	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0012629.1-exon	Sed0012629.1-exon-LG03:1801649..1801723	exon
Sed0012629.1-exon	Sed0012629.1-exon-LG03:1803331..1803658	exon
Sed0012629.1-exon	Sed0012629.1-exon-LG03:1803818..1804034	exon
Sed0012629.1-exon	Sed0012629.1-exon-LG03:1804157..1804694	exon
Sed0012629.1-exon	Sed0012629.1-exon-LG03:1805007..1805105	exon
Sed0012629.1-exon	Sed0012629.1-exon-LG03:1805232..1805790	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0012629.1-cds	Sed0012629.1-cds-LG03:1801666..1801723	CDS
Sed0012629.1-cds	Sed0012629.1-cds-LG03:1803331..1803658	CDS
Sed0012629.1-cds	Sed0012629.1-cds-LG03:1803818..1804034	CDS
Sed0012629.1-cds	Sed0012629.1-cds-LG03:1804157..1804694	CDS
Sed0012629.1-cds	Sed0012629.1-cds-LG03:1805007..1805105	CDS
Sed0012629.1-cds	Sed0012629.1-cds-LG03:1805232..1805485	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0012629.1-three_prime_utr	Sed0012629.1-three_prime_utr-LG03:1805486..1805790	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0012629.1	Sed0012629.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0004834	tryptophan synthase activity
molecular_function	GO:0052684	L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity