Sed0011537.2 (mRNA) Chayote v1

Overview


Name	Sed0011537.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Peptidylprolyl isomerase
Location	LG01: 18044504 .. 18049203 (-)
Sequence length	1407
RNA-Seq Expression	Sed0011537.2
Synteny	Sed0011537.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTTTTAAATTGTTTAGAGAAGGGGTATTGAATATCGGCGAGCGTTTCGTGGATAGGGATATAATGTGGGCATTTTCCAAACACACGCTCTGCGTAGCTCAACCGCCATGGCAGTGGCCAGCGGCCATAACCAAGAGCTCGGATTCTCGTCCCGTTGATCGCCTTCTTCCTCAAATTCGTCCTCAATCCACGGCCAATCAAACAGAGAATGCGAGGCAAGAAGTGTTTTCTCTACCGATTTCAAGAAGATCTGCAATTTTGATCTCTTCGCTACCTTTCACTCTCGTTTCTGTATCTCCGTCCGATGCCAGAGACAGAAGGAACAAGAAGAACATTCCTCTCGAGGATTACATCGCCAGCCGTTAGTAATCTCAATCATCCTCCATGAATCGCGCTATGTTCTGAATTTCTTCTTAATACTTTCAATTGATAGAAAATCCTGAAATCTTGTTCAGTAATTACGACGTATTCTTCAATTTCTTTATCTACATTCTATTGAAATGGTTGAAATGAAGTGAAAGCTTGATTCGCTTTTTTTTTTCACATTTTCGATGATATTTTGACTGCAGCTAATGGATTGAAGTACTATGATATCGAGGAGGGAAAAGGTCCTGCGGCAGAGAAGGGTTCAAGAGTTCAGGTTATCTGTTTGCGACATTTTGAGAGCTATTTTGCCTGTCGATAAAATTGAACTTTACTCTGTATTAGCTTTTTGCTATTTCAGGTGCACTTTGATTGCATGTATAGAGGGATTACAGCCGTGTCAAGTAGAGAATCTAAATTGTTGGCTGGAAATCGTGTTATCTCCCAGGTTCTTACATTTTGTTTATGTGGCTTTAGTTACACTTATAAAATGCTTAGAGGTATGAAATTCATGTTGGATACCTATGAAACATTAAGGTCCCGTTTAATAAGCATTTGGTTTTTAGTTTTTGGTTTTTGAAATTTAAGCCTAAGTTTTTTCTTATTTGAATGCCTACATCTTACTTATATTTTTAGAAATCAAACCAAAATTTGGAGAGAAAAAAAGTAGCTTACAAAAACTTGTTTTTATTTTTGAAATTTGGTTAGCATTCGCATATTTTCTTAAAGAAAGATGGACATATTGTAGGAAAGATGGAACACATTATAGGAAATTTGAGTAAAAATAAGCTTAAATTTCAAAAACCAAAAACAAAAAACCAAATGGTTATGTCCCCAAGGGATGACACAATAGTTGAAGACTCGAGGCTTTGAGGGTATGCTCCCCTCAAGGTCCTGAGTTCAAAACTCACATGGTAACATTACACCTTCGATGTCTCCAGTGTCTGGCCTAGGGACGGGCGTGGTTACTTTGTTTCAAAAAAAACCTAATGGTTATTAAATGGGGCTTAAGTTTTCCGATTATTTGACTGCAAAATGTAGTAAAGTGAGGTTGTTAGGTGAGAACAGTCCATGTGCGTATAGTTGGCACAGACATTCACGGATAAAAAAACAAATGCGTACAAATTACAAGTGTGATGTTAAATATTGAAAATACATCATAAGATTAAATTTCCATTAGTCAATGACTTCAGCTTTTAGGTCAATTGAGTAAACTAAGCATCTGGATATAATCTATAATTGTTCTTTCTTACCAAGAGAGGCGTGTTATTTTACAGCCCAATTCAATTTCTAATGTACGTTGTCCCATGGTTTAATCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGCGGAAACGTGATTTTGTGGACAATCCAAATGGTTTGTTTTCAGCACAGGCTGCACCTAAACCTCCTCCAGCAATGTACTCAATAACTGAAGGGATGAAAGTTGGGGGAAAGGTATGAGCATTCTTCTATTCTAAACTTTAGCACATGCACATGCTTGATTTGTTTGTAATCTTATTCTTTTTTATTATATTCTCTCAAGTCTCGCCCTTTCTTTTTGCGAGGGTTGCTTTGGCATCATTTTCCTTCTTTGTGCAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCAGTAAGTCCCTAAATTTGAGTTGTAGATATTATCGAAGTCTCGAGTATGATAATTTTCCATTACATAAAGTAAGTCTACCATTTGCTTTTTCCTTATGCGTGATTTTTTGACCCACCTACTATTTTTTAAATTTAGTAACATTTACATTTGAATACATGCAAGCTCGGGACTAGAAAAGTTAGGCTCTGAATTTGAGTTGTAAATGTCATTGAAGTCTCGAGTATGGTGTCTAATATTTCATTACTTAAAGTAAGTCGATCATTTACCTTTTTTATATATGGGACTTTTTGACGGATCAACGATTTTTAAAATTGTCTGATCAAGTCTGCATGTGAACGCATGAAAACAGGGGATTAAAACTTGGTCTGCTTTCTTTGTTTTGTTGTCATATCATTTTTTATCTCAAATTGTTGGTGCCTAATTATCCATTGCTTAAAGTAAGTCAATCATTTACTTTTTTTTATGCGGTACTGTTCGACAGATCAACTACTTTTAAAATTGTCTGATCATGCATGTAAACTCATGAAAACATGGGATTAGAACTTGGTCTGCCTGTCTCCTTGGTTTTGTTGCATGCCATTCAATTTGATCTCAGAATGTTGTATTGAAAATGTCATTTATTTTTATCATGAAAGATGGACATATATATTTTGTTTACCCTTTTCGCCCTTCAATGAAATTTATTTGTCAGTTACCGAAAGGGTTGGTGACCTAATGGTTTCATAGTTTGGTGGTAGTCCACTTCAATATCATGGTCATGGGGTCGATAGAAAATCGGTTTTGGTCTTCATTTATTTGAGAGCAGTAATACCCTATTTGTAGGGTTTGTGGTTCCTCTCCTCCAACTTATACTCAAAGAAATGAAATTATTTGTCAGTTATGCTTTTTAGTTTAAAATGGTTTCAAATATACCCTTTAATTTAATTTTTCAAGATAGATAACCTGTTCAAGTAACTTCTTCAGGGGAAAATGCCAAACCGGAAACGCATATATACTTCAAGGACAGAATAAGAATATCATCAATTGTTTAAGAGCAAAGTTGAAACTTCAAACATACTTTTAAAGTGAGTAGCGATTTTGAAACCATCCCATAAAAAGTTGTGAAAGGGCATATTTTAAAAGTTCAAAAAAGTAATGGCAGAATTAAAAATCCATCTATAGTTTTTGGGCAAAAGCCATAATTTAGCTCCTTTTTTTTGTATGCTAGTGTAATTAGTGGAGGAATCCAAGAAATAGTCTAGTCCAGTGCCCTTTGGTTTACTTACGTTATTTATGTCAATTATTGCGTGGAGGGCTGAGATAGAGATAAGATAACAACTTTTTAGTGTTATGGTTATCAAATCTAAATGAAATCTGCTTTGTATTGACAGCCTGGTGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTGGTGCCGCCTGAAAAAGGTGGGACCTGACCTGATTCGAGTTCCAGATTTTGCTTCCCCACCAGACAAGAAGTTGAGCATTAGCTGACTGATTCTTTTGGAAGGACGAGGAGAAGCACAGCCTAGTCTCTGGTACGGGGAGTATTTTCAACGGAACCTCGAGTTCTTTACTTACGATTATTCTCAATATAATGGAAATGTTAAGACCAGCTATTTGGTATGGTATCGTATCTTAGCTTGACTTACTCATTATACGACTGCCCTTTAAACTATAACAAAAAGCTCCACTCTTCTTGGTGCCAAACGCACCAAATTTATGCTTCTGTATTTGGCTTGGCCATGTCACCTTCATTCTGCCCCCTCTTTAGCTTTAGCTTTTGGATACTGATTTTTAGGAGGTAGAGGGCGGCTCTGATAGGGAAAACATGACAGCCTTATTTGTAGGTTGCCTATTGTTTTATGAGCAAAAGGAAAAGTTGAAGTTCCAACTTTCAAGTGTTGTGGATATCATTTTCAGATAGAGAAACACAATAAATTGGTGTTGTCTGGAAGGGGGGTTGGATTGGATTGGATGGTTTGTCCCAAGTGACACTTTGTGGAGCATAATCAAAGGATTTTCCTTTCTCGATGCGTCGAAAGTGCCTCGTCATGGCTAGGATGCTCTTAGGGGCTCCCCCACCCCCTTTCTGTGAAACTTCCTCCTCCTCCTCTAGATATTCCCTTTTGGTCATTTAAGAAAAAGGAAAGACCAACTCAAATCAAACAGACAGTTTGTCCACACAACACGTTGTTGGTTTTTCCCAACTTTGGGTTCAAGTCTAAGTACAAATCCATTAAAATGATGTCATTTTGAGCTAAATGGTGTATTGTGTTTTACTGTGTACCAAACAGGAGTGATTCATGAAAGAGAAGAATCAGTTTCATTGTGAAGTTTGAAAATTTATCAAAAGTGAAGAGACCAATGGGCGATAGATGCAGTGTTTTTACTTTTGTAGCACCTATATCCAGCTAGATTGATCGATGGTTTTGGAATTTGAATGGACCCATATGGTTGTTTTGTGTTTGATTGGTTCGGATTTTGCGGTCTTTGAACTTTTAAATGCTCAATTTTAATATTTGTTTCTAGGGTTTTTGTTCGAAAGTGTTTAGACGTCTGTTACAAAACTGAATTTGTCGCTTTTTAGAGGCTTGTCATCATGCGAATTATATGAGTATTGAATGATGTATGGCGTTGGCTGTTTTCAGGTTCCCA

mRNA sequence

CTATTTTTAAATTGTTTAGAGAAGGGGTATTGAATATCGGCGAGCGTTTCGTGGATAGGGATATAATGTGGGCATTTTCCAAACACACGCTCTGCGTAGCTCAACCGCCATGGCAGTGGCCAGCGGCCATAACCAAGAGCTCGGATTCTCGTCCCGTTGATCGCCTTCTTCCTCAAATTCGTCCTCAATCCACGGCCAATCAAACAGAGAATGCGAGGCAAGAAGTGTTTTCTCTACCGATTTCAAGAAGATCTGCAATTTTGATCTCTTCGCTACCTTTCACTCTCGTTTCTGTATCTCCGTCCGATGCCAGAGACAGAAGGAACAAGAAGAACATTCCTCTCGAGGATTACATCGCCAGCCCTAATGGATTGAAGTACTATGATATCGAGGAGGGAAAAGGTCCTGCGGCAGAGAAGGGTTCAAGAGTTCAGGTGCACTTTGATTGCATGTATAGAGGGATTACAGCCGTGTCAAGTAGAGAATCTAAATTGTTGGCTGGAAATCGTGTTATCTCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGCGGAAACGTGATTTTGTGGACAATCCAAATGGTTTGTTTTCAGCACAGGCTGCACCTAAACCTCCTCCAGCAATGTACTCAATAACTGAAGGGATGAAAGTTGGGGGAAAGGTATGAGCATTCTTCTATTCTAAACTTTAGCACATGCACATGCTTGATTTGTTTGTAATCTTATTCTTTTTTATTATATTCTCTCAAGTCTCGCCCTTTCTTTTTGCGAGGGTTGCTTTGGCATCATTTTCCTTCTTTGTGCAGCGAACGGTGATTGTTCCCCCTGAGGCTGGATATGGTCAAAAGGGAATGAATGAAATCCCACCTGGTGCTACTTTTGAATTGAACATCGAGCTTTTAGAAGTGGTGCCGCCTGAAAAAGGTGGGACCTGACCTGATTCGAGTTCCAGATTTTGCTTCCCCACCAGACAAGAAGTTGAGCATTAGCTGACTGATTCTTTTGGAAGGACGAGGAGAAGCACAGCCTAGTCTCTGGAGTGATTCATGAAAGAGAAGAATCAGTTTCATTGTGAAGTTTGAAAATTTATCAAAAGTGAAGAGACCAATGGGCGATAGATGCAGTGTTTTTACTTTTGTAGCACCTATATCCAGCTAGATTGATCGATGGTTTTGGAATTTGAATGGACCCATATGGTTGTTTTGTGTTTGATTGGTTCGGATTTTGCGGTCTTTGAACTTTTAAATGCTCAATTTTAATATTTGTTTCTAGGGTTTTTGTTCGAAAGTGTTTAGACGTCTGTTACAAAACTGAATTTGTCGCTTTTTAGAGGCTTGTCATCATGCGAATTATATGAGTATTGAATGATGTATGGCGTTGGCTGTTTTCAGGTTCCCA

Coding sequence (CDS)

ATGTGGGCATTTTCCAAACACACGCTCTGCGTAGCTCAACCGCCATGGCAGTGGCCAGCGGCCATAACCAAGAGCTCGGATTCTCGTCCCGTTGATCGCCTTCTTCCTCAAATTCGTCCTCAATCCACGGCCAATCAAACAGAGAATGCGAGGCAAGAAGTGTTTTCTCTACCGATTTCAAGAAGATCTGCAATTTTGATCTCTTCGCTACCTTTCACTCTCGTTTCTGTATCTCCGTCCGATGCCAGAGACAGAAGGAACAAGAAGAACATTCCTCTCGAGGATTACATCGCCAGCCCTAATGGATTGAAGTACTATGATATCGAGGAGGGAAAAGGTCCTGCGGCAGAGAAGGGTTCAAGAGTTCAGGTGCACTTTGATTGCATGTATAGAGGGATTACAGCCGTGTCAAGTAGAGAATCTAAATTGTTGGCTGGAAATCGTGTTATCTCCCAGCCTTATGAGTTCAAAGTAGGAGCCCCTCCCGGGAAGGAGCGGAAACGTGATTTTGTGGACAATCCAAATGGTTTGTTTTCAGCACAGGCTGCACCTAAACCTCCTCCAGCAATGTACTCAATAACTGAAGGGATGAAAGTTGGGGGAAAGGTATGA

Protein sequence

MWAFSKHTLCVAQPPWQWPAAITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPSDARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRESKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGKV

Homology

[Close]

BLAST of Sed0011537.2 vs. NCBI nr
Match: XP_038898611.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.3e-86
Identity = 162/182 (89.01%), Postives = 171/182 (93.96%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPS 80
           ++ KS DS P+DRLLPQIR QS+ NQ ENARQEVFSLPISRRSAILISSLPFTLVSVSPS
Sbjct: 4   SVPKSLDSCPIDRLLPQIRSQSSPNQRENARQEVFSLPISRRSAILISSLPFTLVSVSPS 63

Query: 81  DARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRE 140
            AR+RRNKK IPLEDY+ SPNGLKYYD+EEGKGP AEKGS VQVHFDC+YRGITAVSSRE
Sbjct: 64  KARERRNKKTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRE 123

Query: 141 SKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 200
           SKLLAGNRVI+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG
Sbjct: 124 SKLLAGNRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 183

Query: 201 GK 203
           GK
Sbjct: 184 GK 185

[Close]

BLAST of Sed0011537.2 vs. NCBI nr
Match: XP_031739664.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 9.0e-83
Identity = 155/182 (85.16%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPS 80
           ++  + DS P+ RLLPQIR  S++NQ ENA Q+ FSLPISRRSAILISSLPFTLVSVSPS
Sbjct: 4   SVPNTLDSSPIHRLLPQIRSHSSSNQRENASQQEFSLPISRRSAILISSLPFTLVSVSPS 63

Query: 81  DARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRE 140
            AR+RRNKK IPLEDY+ SPNGLKYYD+EEGKGP AEKGS VQVHFDC+YRGITAVSSRE
Sbjct: 64  KARERRNKKTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRE 123

Query: 141 SKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 200
           SKLLAGNRVI+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG
Sbjct: 124 SKLLAGNRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 183

Query: 201 GK 203
           GK
Sbjct: 184 GK 185

[Close]

BLAST of Sed0011537.2 vs. NCBI nr
Match: XP_004145556.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic isoform X1 [Cucumis sativus] >KGN55525.1 hypothetical protein Csa_012855 [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 9.0e-83
Identity = 155/182 (85.16%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPS 80
           ++  + DS P+ RLLPQIR  S++NQ ENA Q+ FSLPISRRSAILISSLPFTLVSVSPS
Sbjct: 4   SVPNTLDSSPIHRLLPQIRSHSSSNQRENASQQEFSLPISRRSAILISSLPFTLVSVSPS 63

Query: 81  DARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRE 140
            AR+RRNKK IPLEDY+ SPNGLKYYD+EEGKGP AEKGS VQVHFDC+YRGITAVSSRE
Sbjct: 64  KARERRNKKTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRE 123

Query: 141 SKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 200
           SKLLAGNRVI+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG
Sbjct: 124 SKLLAGNRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 183

Query: 201 GK 203
           GK
Sbjct: 184 GK 185

[Close]

BLAST of Sed0011537.2 vs. NCBI nr
Match: XP_022941513.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita moschata])

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82
Identity = 158/183 (86.34%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSP- 80
           AITKS DS P+ RLLPQIR QSTAN+ ENA QE+FSLPISRRS ILISSLP  LVSVSP 
Sbjct: 4   AITKSLDSCPIHRLLPQIRSQSTANRRENASQELFSLPISRRSVILISSLPLALVSVSPS 63

Query: 81  SDARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSR 140
           S+AR+RR++K IPLEDY+ SPNGLKYYDIEEGKGP AEKGS VQVHFDC+YRGITAVSSR
Sbjct: 64  SEARERRSRKTIPLEDYLTSPNGLKYYDIEEGKGPVAEKGSTVQVHFDCLYRGITAVSSR 123

Query: 141 ESKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKV 200
           ESKLLAGNR+I+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKV
Sbjct: 124 ESKLLAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKV 183

Query: 201 GGK 203
           GGK
Sbjct: 184 GGK 186

[Close]

BLAST of Sed0011537.2 vs. NCBI nr
Match: XP_022135703.1 (peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Momordica charantia])

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPS 80
           A+TKS DS  +DRLLPQ R QST +   NARQE  SLPISRRSAILISSLPF LVSVSPS
Sbjct: 4   AVTKSLDSWSIDRLLPQTRSQSTPSSRANARQEALSLPISRRSAILISSLPFALVSVSPS 63

Query: 81  DARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRE 140
           +ARDRRNKK +PLEDY+ SPNGLKYYD+ EGKGP AEKGS VQVHFDC+YRGITAVSSRE
Sbjct: 64  EARDRRNKKTVPLEDYLTSPNGLKYYDVVEGKGPVAEKGSTVQVHFDCLYRGITAVSSRE 123

Query: 141 SKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 200
           SKLLAGNR+I+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG
Sbjct: 124 SKLLAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 183

Query: 201 GK 203
           GK
Sbjct: 184 GK 185

[Close]

BLAST of Sed0011537.2 vs. ExPASy Swiss-Prot
Match: Q9LM71 (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP18 PE=1 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 5.0e-60
Identity = 120/174 (68.97%), Postives = 141/174 (81.03%), Query Frame = 0


Query: 35  LPQIRPQSTANQTENARQEV-FSLPISRRSA--ILISSLPFT---LVSVSPSDARDRRNK 94
           LP+I   S A+Q+    Q V FS+PISRR A  IL+SS+P T   +++ S S+AR+RR++
Sbjct: 18  LPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTSFFVLTPSSSEARERRSR 77

Query: 95  KNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRESKLLAGNR 154
           K IPLE+Y   P GLK+YDIEEGKGP A +GS  QVHFDC YR ITA+S+RESKLLAGNR
Sbjct: 78  KVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYRSITAISTRESKLLAGNR 137

Query: 155 VISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK 203
            I+QPYEFKVG+ PGKERKR+FVDNPNGLFSAQAAPKPPPAMY ITEGMKVGGK
Sbjct: 138 SIAQPYEFKVGSTPGKERKREFVDNPNGLFSAQAAPKPPPAMYFITEGMKVGGK 191

[Close]

BLAST of Sed0011537.2 vs. ExPASy Swiss-Prot
Match: Q9SR70 (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-4 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.2e-10
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 80  SDARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSR 139
           S +R       +P  D+   PNGLKYYDI+ G G  A KGSRV VH+   ++GIT ++SR
Sbjct: 84  STSRRALRASKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSR 143

Query: 140 ESKLLAGNRVISQPYEFKVG 160
           +   + G      PY F VG
Sbjct: 144 QGLGVGG----GTPYGFDVG 159

[Close]

BLAST of Sed0011537.2 vs. ExPASy TrEMBL
Match: A0A0A0L0S6 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G664330 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 4.4e-83
Identity = 155/182 (85.16%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPS 80
           ++  + DS P+ RLLPQIR  S++NQ ENA Q+ FSLPISRRSAILISSLPFTLVSVSPS
Sbjct: 4   SVPNTLDSSPIHRLLPQIRSHSSSNQRENASQQEFSLPISRRSAILISSLPFTLVSVSPS 63

Query: 81  DARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRE 140
            AR+RRNKK IPLEDY+ SPNGLKYYD+EEGKGP AEKGS VQVHFDC+YRGITAVSSRE
Sbjct: 64  KARERRNKKTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRE 123

Query: 141 SKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 200
           SKLLAGNRVI+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG
Sbjct: 124 SKLLAGNRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 183

Query: 201 GK 203
           GK
Sbjct: 184 GK 185

[Close]

BLAST of Sed0011537.2 vs. ExPASy TrEMBL
Match: A0A6J1C5M1 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111007594 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.4e-83
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPS 80
           A+TKS DS  +DRLLPQ R QST +   NARQE  SLPISRRSAILISSLPF LVSVSPS
Sbjct: 4   AVTKSLDSWSIDRLLPQTRSQSTPSSRANARQEALSLPISRRSAILISSLPFALVSVSPS 63

Query: 81  DARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRE 140
           +ARDRRNKK +PLEDY+ SPNGLKYYD+ EGKGP AEKGS VQVHFDC+YRGITAVSSRE
Sbjct: 64  EARDRRNKKTVPLEDYLTSPNGLKYYDVVEGKGPVAEKGSTVQVHFDCLYRGITAVSSRE 123

Query: 141 SKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 200
           SKLLAGNR+I+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG
Sbjct: 124 SKLLAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVG 183

Query: 201 GK 203
           GK
Sbjct: 184 GK 185

[Close]

BLAST of Sed0011537.2 vs. ExPASy TrEMBL
Match: A0A6J1FSB4 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111446792 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.4e-83
Identity = 158/183 (86.34%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 21  AITKSSDSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSP- 80
           AITKS DS P+ RLLPQIR QSTAN+ ENA QE+FSLPISRRS ILISSLP  LVSVSP 
Sbjct: 4   AITKSLDSCPIHRLLPQIRSQSTANRRENASQELFSLPISRRSVILISSLPLALVSVSPS 63

Query: 81  SDARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSR 140
           S+AR+RR++K IPLEDY+ SPNGLKYYDIEEGKGP AEKGS VQVHFDC+YRGITAVSSR
Sbjct: 64  SEARERRSRKTIPLEDYLTSPNGLKYYDIEEGKGPVAEKGSTVQVHFDCLYRGITAVSSR 123

Query: 141 ESKLLAGNRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKV 200
           ESKLLAGNR+I+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKV
Sbjct: 124 ESKLLAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKV 183

Query: 201 GGK 203
           GGK
Sbjct: 184 GGK 186

[Close]

BLAST of Sed0011537.2 vs. ExPASy TrEMBL
Match: A0A5D3D8R8 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00450 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 27  DSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPSDARDRR 86
           DS P+ RLLPQIR QS+ NQ ENA Q+ FSLPISRRSAILISSLPFTLVSVSPS AR+RR
Sbjct: 10  DSCPIHRLLPQIRSQSSPNQRENASQQEFSLPISRRSAILISSLPFTLVSVSPSKARERR 69

Query: 87  NKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRESKLLAG 146
           NK+ IPLEDY+ SPNGLKYYD+EEGKGP AEKGS VQVHFDC+YRGITAVSSRESKLLAG
Sbjct: 70  NKRTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAG 129

Query: 147 NRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK 203
           NRVI+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK
Sbjct: 130 NRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK 185

[Close]

BLAST of Sed0011537.2 vs. ExPASy TrEMBL
Match: A0A1S3BUM2 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103493843 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 27  DSRPVDRLLPQIRPQSTANQTENARQEVFSLPISRRSAILISSLPFTLVSVSPSDARDRR 86
           DS P+ RLLPQIR QS+ NQ ENA Q+ FSLPISRRSAILISSLPFTLVSVSPS AR+RR
Sbjct: 10  DSCPIHRLLPQIRSQSSPNQRENASQQEFSLPISRRSAILISSLPFTLVSVSPSKARERR 69

Query: 87  NKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRESKLLAG 146
           NK+ IPLEDY+ SPNGLKYYD+EEGKGP AEKGS VQVHFDC+YRGITAVSSRESKLLAG
Sbjct: 70  NKRTIPLEDYLTSPNGLKYYDVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAG 129

Query: 147 NRVISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK 203
           NRVI+QPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK
Sbjct: 130 NRVIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK 185

[Close]

BLAST of Sed0011537.2 vs. TAIR 10
Match: AT1G20810.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61
Identity = 120/174 (68.97%), Postives = 141/174 (81.03%), Query Frame = 0


Query: 35  LPQIRPQSTANQTENARQEV-FSLPISRRSA--ILISSLPFT---LVSVSPSDARDRRNK 94
           LP+I   S A+Q+    Q V FS+PISRR A  IL+SS+P T   +++ S S+AR+RR++
Sbjct: 18  LPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTSFFVLTPSSSEARERRSR 77

Query: 95  KNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSRESKLLAGNR 154
           K IPLE+Y   P GLK+YDIEEGKGP A +GS  QVHFDC YR ITA+S+RESKLLAGNR
Sbjct: 78  KVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYRSITAISTRESKLLAGNR 137

Query: 155 VISQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGK 203
            I+QPYEFKVG+ PGKERKR+FVDNPNGLFSAQAAPKPPPAMY ITEGMKVGGK
Sbjct: 138 SIAQPYEFKVGSTPGKERKREFVDNPNGLFSAQAAPKPPPAMYFITEGMKVGGK 191

[Close]

BLAST of Sed0011537.2 vs. TAIR 10
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 80  SDARDRRNKKNIPLEDYIASPNGLKYYDIEEGKGPAAEKGSRVQVHFDCMYRGITAVSSR 139
           S +R       +P  D+   PNGLKYYDI+ G G  A KGSRV VH+   ++GIT ++SR
Sbjct: 84  STSRRALRASKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSR 143

Query: 140 ESKLLAGNRVISQPYEFKVG 160
           +   + G      PY F VG
Sbjct: 144 QGLGVGG----GTPYGFDVG 159

The following BLAST results are available for this feature:

BLAST of Sed0011537.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898611.1	2.3e-86	89.01	peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Benincasa hispida]	[more]
XP_031739664.1	9.0e-83	85.16	peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic isoform X2 [Cucumis sa...	[more]
XP_004145556.1	9.0e-83	85.16	peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic isoform X1 [Cucumis sa...	[more]
XP_022941513.1	1.5e-82	86.34	peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucurbita moschata]	[more]
XP_022135703.1	1.5e-82	85.16	peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Momordica charantia]	[more]

BLAST of Sed0011537.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM71	5.0e-60	68.97	Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thalian...	[more]
Q9SR70	6.2e-10	42.50	Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of Sed0011537.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0S6	4.4e-83	85.16	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_4G664330 PE=4 SV=1	[more]
A0A6J1C5M1	7.4e-83	85.16	Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111007594 PE=4 SV=...	[more]
A0A6J1FSB4	7.4e-83	86.34	Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111446792 PE=4 SV=1	[more]
A0A5D3D8R8	1.3e-82	88.07	Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BUM2	1.3e-82	88.07	Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103493843 PE=4 SV=1	[more]

BLAST of Sed0011537.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20810.1	3.6e-61	68.97	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G10060.1	4.4e-11	42.50	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.50.40		coord: 78..203 e-value: 3.4E-10 score: 41.6
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 82..141
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 114..202 e-value: 4.5E-8 score: 33.3
IPR044180	Peptidyl-prolyl cis-trans isomerase FKBP18-like	PANTHER	PTHR47862	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC	coord: 35..202

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0011537	Sed0011537	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011537.2-exon	Sed0011537.2-exon-LG01:18044504..18044864	exon
Sed0011537.2-exon	Sed0011537.2-exon-LG01:18045624..18045794	exon
Sed0011537.2-exon	Sed0011537.2-exon-LG01:18047165..18047518	exon
Sed0011537.2-exon	Sed0011537.2-exon-LG01:18048391..18048477	exon
Sed0011537.2-exon	Sed0011537.2-exon-LG01:18048562..18048632	exon
Sed0011537.2-exon	Sed0011537.2-exon-LG01:18048841..18049203	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011537.2-three_prime_utr	Sed0011537.2-three_prime_utr-LG01:18044504..18044864	three_prime_UTR
Sed0011537.2-three_prime_utr	Sed0011537.2-three_prime_utr-LG01:18045624..18045794	three_prime_UTR
Sed0011537.2-three_prime_utr	Sed0011537.2-three_prime_utr-LG01:18047165..18047362	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011537.2-cds	Sed0011537.2-cds-LG01:18047363..18047518	CDS
Sed0011537.2-cds	Sed0011537.2-cds-LG01:18048391..18048477	CDS
Sed0011537.2-cds	Sed0011537.2-cds-LG01:18048562..18048632	CDS
Sed0011537.2-cds	Sed0011537.2-cds-LG01:18048841..18049138	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011537.2-five_prime_utr	Sed0011537.2-five_prime_utr-LG01:18049139..18049203	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0011537.2	Sed0011537.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity