Sed0011284.1 (mRNA) Chayote v1

Overview


Name	Sed0011284.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	rRNA processing protein-related
Location	LG05: 4233059 .. 4235697 (+)
Sequence length	1317
RNA-Seq Expression	Sed0011284.1
Synteny	Sed0011284.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTATCGAAGGGCTTTGAGCAGCTGGAAACGACGCGAGAATTGTTCGTCTTTTGATTCTGAAAATATTTTCATTCTTTGAACCAGAAAGGTAGCTTCTTGTCTCTTATCATCTAATTGTTCTTCATAATCTGTTGTTGTTTTGATTGATTGATTGATTGATTGATTTGCTTTTTCTCTCTCGGAATATTGATTTCGGCTTCATCTGTTTTTAACCCTAAATCCTAGTTGTAGTAGCTCGGTTTTCTTGATTCTGGTTCATAGTCTTTGATTTTTAGTAGTTGTGTAGTATTATGGGGTTAAATTTGCGGGAAACCTGCTGTTTCTCTGCATTTGCGGGCTCTTTCTATTTGTTATGATCCCACTATTATTCCACATTGGATTGCGAAGGAGTGGCGAGTCATCGAAGGCTTAGGCTTTGAAGGTGTGCTGCTCTCAAAATTTTAGTTTCGAGACTTATTTGTGATATTAAGGTGTGTTTGGAGCACCGGTTTGGTTAGCATAGACGGAAGGTTATGATAAACGGTGAGATATTATAAATGTTATTTGAGGCGCAAGTTATTATATGAGAGATTATGATAAATAGTGTTTGAGAGACTGGTTATGTAACAAAGTGTGATATATGTAAGGTTTAGATAAACATGCACATAGGTTTAGATAAATGAGCACACAGGTTTAGGTAAACACCATTTATAATAAACGGTGGAGCAAACATTAGTTGAATTATTATAACCAAACCGGCTATTTACATAAACGAAGGCCCAAACACCCTTAATTTGTAGACATCTTCAGTGGCTCCTTTCTTTTGATGCCTCTCGGTGTCTAGCTTAGAGATGTGTGTGGTTACCTCGGAAATAGTGAAGTCAAACTCTGATTTCTCGGTTTAAAAAAAAAAACTATTATTCCCCATTGGAAAAGTGGACGGTCCACAAAACATTAATATTGTGGACTACTCTTATCACCTATTGGTTTGGAGATGGTATTCACACTGTAATACTGTTCTCATATATTTAAAAAAAAAATAATTATACGTTATTTTCTGGTTCTTATTGCTAGTAGTAGCCTTGTATATTATCATACTATGAAGTTTTTGTTCTTTGTCCCTTAGTATTAAGTAACTTGTATGGCTTACTTTGTACTCTCCAAATGATGAACAATGCTGTCATAATGAACGTTTGGTACGATCTCTAGTTAGGTCATTTCTCGTGATTGATGAGCATTGAAATTTGAATAGTTAGTCTTATTTATGCAAAGTCCATTTTTTTTCTGGAAGATGGATTATTATTTAATGGGAATCTAGAATTATAGTTGTCTTTTTTCATTTCGTACATTTGATGTTCTCGCCTGTTTATCTTTGGATATAGTTAGCAAATTTAGAGGTCTAACCTTAATAATCGTGATTGTTTTGGGTAGGTTTTAATGGGTGTGTCGGATAAAGATACTAGCTTCTTAAATGAGGACGCAATGGAAGACGAAGATCTTGGTAGCGAGGATTCTGATTTCGAGTCTGAATCTGAATCTGATATGGAGGAGGAAGATGTGAAATTGTCTGAACCATCAAAGAATGCCGTATATAATGCTGATGGTCTCCTTGATAAGCTTGGAGATATTAGCTGGCCCGAAAATGTCGAGTGGATACACAAGTTGTCTCTTGATATTGATCAAGAGAAAGAGGTGGATGTGAATGATGATCTTGCTAGAGAGCTTTCATTCTATACACAGGCTTTGCAGGGGACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTGCCGTTTCTCAGGCCGAGTGACTATTACGCGGAGATGGTGAAGACAGATACTCACATGGAAAAAGTGAAAGGTCGGCTGCTTTCGGAACAGAAAAGAATGGAGGAGGCTGAAGAAAGAAGGAAAGCTAGAGAAGCCAAGAAGTTGTCTAAAGAGATTCAAGCTCAGAAGCTTAAGGAGAGAGCTAAGCAAAAGAAAGAGGATATTGAATCTGTTAAGAAATGGAGGAAGCAAAGGCAAAAGAGTGGCTTTGCTGGAGGTGATAAAGGTGGAGATTTGGACTTGTCCTTTAAAGATGTAAAGGCATTTGAGAGGTCTGGTGGTAAGAAGAGACCAGGGGTGTCTCCTGGCGATCGCTCAGGAGGGAAGACGAGACATGGAGGGGGAGGAGGAAAGGGGAATTATCCAAAGAAGAAGAGAGATTCCAAGAATTCCAAGTTCGGGTTCGGCGGGAGGAAAAGTTTGAAAAAACAGAACACATCTGAGACAACAAATGATATTAGAGGCTTCAACAATGGCAGTTTGTCAAGCAACAAAAAAAGGAAGAGGTCATAGATTTATGAAGTTTCAATTCCATTCTGTAATCCTAGAAAGATGTAGACTTGAGGCTTATGGTATGTATGTCTCTTTTTTTTTGAAGAAATAGAAATTTTGGTAGTAATTGTTTTTGTGCAATTATGGTTTTTAATTATATAAACTCAAATTGATACCATAATACTTTTTAGATCATTCCTGTGTAAGGCATTGAAATGTGTGTTTGGTTAGTTTTGCGTGGGTTAGAAGAGATGTATTCATTTGAGATTCATCTTTTGACAAAACGCAGTTTAACTTTGAGGTGATGTATATGTGATATATATTTTACCATCTAA

mRNA sequence

GGTTTATCGAAGGGCTTTGAGCAGCTGGAAACGACGCGAGAATTGTTCGTCTTTTGATTCTGAAAATATTTTCATTCTTTGAACCAGAAAGGTTTTAATGGGTGTGTCGGATAAAGATACTAGCTTCTTAAATGAGGACGCAATGGAAGACGAAGATCTTGGTAGCGAGGATTCTGATTTCGAGTCTGAATCTGAATCTGATATGGAGGAGGAAGATGTGAAATTGTCTGAACCATCAAAGAATGCCGTATATAATGCTGATGGTCTCCTTGATAAGCTTGGAGATATTAGCTGGCCCGAAAATGTCGAGTGGATACACAAGTTGTCTCTTGATATTGATCAAGAGAAAGAGGTGGATGTGAATGATGATCTTGCTAGAGAGCTTTCATTCTATACACAGGCTTTGCAGGGGACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTGCCGTTTCTCAGGCCGAGTGACTATTACGCGGAGATGGTGAAGACAGATACTCACATGGAAAAAGTGAAAGGTCGGCTGCTTTCGGAACAGAAAAGAATGGAGGAGGCTGAAGAAAGAAGGAAAGCTAGAGAAGCCAAGAAGTTGTCTAAAGAGATTCAAGCTCAGAAGCTTAAGGAGAGAGCTAAGCAAAAGAAAGAGGATATTGAATCTGTTAAGAAATGGAGGAAGCAAAGGCAAAAGAGTGGCTTTGCTGGAGGTGATAAAGGTGGAGATTTGGACTTGTCCTTTAAAGATGTAAAGGCATTTGAGAGGTCTGGTGGTAAGAAGAGACCAGGGGTGTCTCCTGGCGATCGCTCAGGAGGGAAGACGAGACATGGAGGGGGAGGAGGAAAGGGGAATTATCCAAAGAAGAAGAGAGATTCCAAGAATTCCAAGTTCGGGTTCGGCGGGAGGAAAAGTTTGAAAAAACAGAACACATCTGAGACAACAAATGATATTAGAGGCTTCAACAATGGCAGTTTGTCAAGCAACAAAAAAAGGAAGAGGTCATAGATTTATGAAGTTTCAATTCCATTCTGTAATCCTAGAAAGATGTAGACTTGAGGCTTATGGTATGTATGTCTCTTTTTTTTTGAAGAAATAGAAATTTTGGTAGTAATTGTTTTTGTGCAATTATGGTTTTTAATTATATAAACTCAAATTGATACCATAATACTTTTTAGATCATTCCTGTGTAAGGCATTGAAATGTGTGTTTGGTTAGTTTTGCGTGGGTTAGAAGAGATGTATTCATTTGAGATTCATCTTTTGACAAAACGCAGTTTAACTTTGAGGTGATGTATATGTGATATATATTTTACCATCTAA

Coding sequence (CDS)

ATGGGTGTGTCGGATAAAGATACTAGCTTCTTAAATGAGGACGCAATGGAAGACGAAGATCTTGGTAGCGAGGATTCTGATTTCGAGTCTGAATCTGAATCTGATATGGAGGAGGAAGATGTGAAATTGTCTGAACCATCAAAGAATGCCGTATATAATGCTGATGGTCTCCTTGATAAGCTTGGAGATATTAGCTGGCCCGAAAATGTCGAGTGGATACACAAGTTGTCTCTTGATATTGATCAAGAGAAAGAGGTGGATGTGAATGATGATCTTGCTAGAGAGCTTTCATTCTATACACAGGCTTTGCAGGGGACAAGAATGGCCCTTGAGAAGTTCCAATCTTTAGGACTGCCGTTTCTCAGGCCGAGTGACTATTACGCGGAGATGGTGAAGACAGATACTCACATGGAAAAAGTGAAAGGTCGGCTGCTTTCGGAACAGAAAAGAATGGAGGAGGCTGAAGAAAGAAGGAAAGCTAGAGAAGCCAAGAAGTTGTCTAAAGAGATTCAAGCTCAGAAGCTTAAGGAGAGAGCTAAGCAAAAGAAAGAGGATATTGAATCTGTTAAGAAATGGAGGAAGCAAAGGCAAAAGAGTGGCTTTGCTGGAGGTGATAAAGGTGGAGATTTGGACTTGTCCTTTAAAGATGTAAAGGCATTTGAGAGGTCTGGTGGTAAGAAGAGACCAGGGGTGTCTCCTGGCGATCGCTCAGGAGGGAAGACGAGACATGGAGGGGGAGGAGGAAAGGGGAATTATCCAAAGAAGAAGAGAGATTCCAAGAATTCCAAGTTCGGGTTCGGCGGGAGGAAAAGTTTGAAAAAACAGAACACATCTGAGACAACAAATGATATTAGAGGCTTCAACAATGGCAGTTTGTCAAGCAACAAAAAAAGGAAGAGGTCATAG

Protein sequence

MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESESDMEEEDVKLSEPSKNAVYNADGLLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGGKTRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSNKKRKRS

Homology

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BLAST of Sed0011284.1 vs. NCBI nr
Match: XP_038876320.1 (probable rRNA-processing protein EBP2 homolog [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 4.5e-131
Identity = 263/302 (87.09%), Postives = 284/302 (94.04%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESESDMEE-EDVKLSEPSKNAVYNADGLLD 60
           MGVS KD SFLNED ++D+DL SEDS+FESESES+ EE EDV+LSEPSKNA+YNADGLLD
Sbjct: 1   MGVSVKDASFLNEDKIDDDDLHSEDSEFESESESESEEDEDVELSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLAREL+FYTQALQG RMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGARMALEKFQSLGLP 120

Query: 121 FLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERA 180
           FLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK KERA
Sbjct: 121 FLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQKERA 180

Query: 181 KQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGG 240
           KQKKE+IESVKKWRKQRQK+GFAGGDKGGD+D SF+D K FERSGGKKRPGVSPGDR+GG
Sbjct: 181 KQKKEEIESVKKWRKQRQKNGFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDRTGG 240

Query: 241 KTRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSNKKRK 300
           K RH GGGGKG  PKKKRD ++SKFGFGGRKSL KQNT+ETTNDI GFNNGSLSSNK+RK
Sbjct: 241 KARH-GGGGKGKNPKKKRDFRDSKFGFGGRKSLNKQNTAETTNDISGFNNGSLSSNKRRK 300

Query: 301 RS 302
           RS
Sbjct: 301 RS 301

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BLAST of Sed0011284.1 vs. NCBI nr
Match: XP_008467285.1 (PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis melo])

HSP 1 Score: 475.3 bits (1222), Expect = 3.8e-130
Identity = 262/306 (85.62%), Postives = 284/306 (92.81%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESE----SESDMEEEDVKLSEPSKNAVYNADG 60
           MGVS KD  FLNED +ED+DL SEDS+FESE    SES+ EEEDV+LSEPSKNA+YNADG
Sbjct: 1   MGVSIKDADFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 60

Query: 61  LLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSL 120
           LLDKLGDISWPENVEWIHKL+ DIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSL
Sbjct: 61  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 120

Query: 121 GLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLK 180
           GLPFLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK K
Sbjct: 121 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 180

Query: 181 ERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDR 240
           ERAKQKKE+IESVKKWRKQRQK+ FAGGDKGGD+D SF+D K FERSGGKKRPGVSPGDR
Sbjct: 181 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 240

Query: 241 SGGKTRH-GGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSN 300
           SGGK RH GGGGGKG   KKKRD ++SKFGFGGRKSLKKQNT+ETTNDIRGFNNGSLS+N
Sbjct: 241 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 300

Query: 301 KKRKRS 302
           K+RK+S
Sbjct: 301 KRRKKS 306

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BLAST of Sed0011284.1 vs. NCBI nr
Match: KAA0055124.1 (putative rRNA-processing protein EBP2-like protein [Cucumis melo var. makuwa] >TYK20735.1 putative rRNA-processing protein EBP2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 475.3 bits (1222), Expect = 3.8e-130
Identity = 262/306 (85.62%), Postives = 284/306 (92.81%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESE----SESDMEEEDVKLSEPSKNAVYNADG 60
           MGVS KD  FLNED +ED+DL SEDS+FESE    SES+ EEEDV+LSEPSKNA+YNADG
Sbjct: 10  MGVSIKDAEFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 69

Query: 61  LLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSL 120
           LLDKLGDISWPENVEWIHKL+ DIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSL
Sbjct: 70  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 129

Query: 121 GLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLK 180
           GLPFLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK K
Sbjct: 130 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 189

Query: 181 ERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDR 240
           ERAKQKKE+IESVKKWRKQRQK+ FAGGDKGGD+D SF+D K FERSGGKKRPGVSPGDR
Sbjct: 190 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 249

Query: 241 SGGKTRH-GGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSN 300
           SGGK RH GGGGGKG   KKKRD ++SKFGFGGRKSLKKQNT+ETTNDIRGFNNGSLS+N
Sbjct: 250 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 309

Query: 301 KKRKRS 302
           K+RK+S
Sbjct: 310 KRRKKS 315

[Close]

BLAST of Sed0011284.1 vs. NCBI nr
Match: XP_004143659.2 (probable rRNA-processing protein EBP2 homolog [Cucumis sativus] >KGN50375.1 hypothetical protein Csa_000648 [Cucumis sativus])

HSP 1 Score: 472.6 bits (1215), Expect = 2.5e-129
Identity = 261/312 (83.65%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESES-----DMEEEDVKLSEPSKNAVYNAD 60
           MGVS KD SFLNED +ED D  SEDS+FESESES     + EEEDV+LSEPSKNA+YNAD
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 61  GLLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQS 120
           GLLDKLGDISWPENVEWIHKL+ DI+QEKEVDVNDDL REL+FYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 121 LGLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKL 180
           LGLPFLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK 
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQ 180

Query: 181 KERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGD 240
           KERAKQKKE+IESVKKWRKQRQK+ FAGGDKGGD+D SF+D K FERSGGKKRPGVSPGD
Sbjct: 181 KERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 241 RSGGKTRH------GGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNN 300
           RSGGK RH      GGGGGKG  PKKKRD ++SKFGFGGRKSLKKQNT++TTNDIRGFNN
Sbjct: 241 RSGGKARHGGGGGGGGGGGKGKIPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 300

Query: 301 GSLSSNKKRKRS 302
           GSLSSNK+RK+S
Sbjct: 301 GSLSSNKRRKKS 312

[Close]

BLAST of Sed0011284.1 vs. NCBI nr
Match: XP_022981565.1 (probable rRNA-processing protein EBP2 homolog [Cucurbita maxima])

HSP 1 Score: 468.0 bits (1203), Expect = 6.1e-128
Identity = 258/301 (85.71%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESESDMEEEDVKLSEPSKNAVYNADGLLDK 60
           MGVSDKD  FLNED ME++DL +EDSDFESESES  EEE+VKLSEPSK A+YNADGLLDK
Sbjct: 1   MGVSDKDARFLNEDTMENDDLSNEDSDFESESESGEEEEEVKLSEPSKTAIYNADGLLDK 60

Query: 61  LGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLPF 120
           L DISWP+NVEWIH+L LDIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSLGLPF
Sbjct: 61  LEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPF 120

Query: 121 LRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERAK 180
           LRPSDYYAEMVKTDTHM KVKGRLL+EQ++MEEAEERRKAREAKKL+KEIQAQKLKERAK
Sbjct: 121 LRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKERAK 180

Query: 181 QKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGGK 240
           QKKE+IESVKKWRKQRQKSGFAGGDKGG+++LSF+D KAFERSGGKKRPGVSPGDRSGGK
Sbjct: 181 QKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDRSGGK 240

Query: 241 TRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSNKKRKR 300
            RH   GGKG   KKK+D ++SKFGFGGRKSLKKQNT+ETTNDIRGFNN SL SNK+RKR
Sbjct: 241 ARH-RNGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNDSLLSNKRRKR 300

Query: 301 S 302
           S
Sbjct: 301 S 300

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BLAST of Sed0011284.1 vs. ExPASy Swiss-Prot
Match: Q9LUJ5 (Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.9e-82
Identity = 181/300 (60.33%), Postives = 231/300 (77.00%), Query Frame = 0


Query: 3   VSDKDTSFLNEDAMEDEDLGSEDSDFESESESDMEEE-DVKLSEPSKNAVYNADGLLDKL 62
           VSD + + ++ED        + DS+ ES S+SD E E   KL+EP+K A+YN DGLLDKL
Sbjct: 8   VSDDEMNMIDED-------DATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKL 67

Query: 63  GDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLPFL 122
            DISWPE+V+W HKL+++IDQ   VDVNDDLARE +FYTQAL+GTR A  K   +G+ FL
Sbjct: 68  QDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFL 127

Query: 123 RPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERAKQ 182
           RP++YYAEMVK+D HMEKVK RLL E+K++EE+EERRKAR+ K+++KE+Q+QK+KERAK+
Sbjct: 128 RPANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKE 187

Query: 183 KKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGGKT 242
           KK++IESVKKWRKQRQ+SGF+  DK G+ +L F+  K+F+R GGKKRPGVSPGDRSGGK 
Sbjct: 188 KKDNIESVKKWRKQRQQSGFS--DKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKG 247

Query: 243 RHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIR-GFNNGSLSSNKKRKR 301
           R     G      KKR+ ++SKFG GGRK L KQNT+ETTND + GF  G  S NK++KR
Sbjct: 248 RPTSRMG-----NKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

[Close]

BLAST of Sed0011284.1 vs. ExPASy Swiss-Prot
Match: Q09958 (Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 GN=C18A3.3 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19
Identity = 96/290 (33.10%), Postives = 157/290 (54.14%), Query Frame = 0


Query: 14  DAMEDEDLGSEDSDFESESE----SDMEEEDVKLSEPSKNAVYNADG-LLDKLGDISWPE 73
           +AM+ E++ S+  D E E +    + + ++ + +    K  + N    + +KL +I+  +
Sbjct: 44  EAMDIEEVESDGDDDERELQAAFAAGLLKDGLNIQVAKKRPIINKSAEMKEKLAEIT--K 103

Query: 74  NVEWIHKLSL---DIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLPFLRPSD 133
           ++ W+  L +     + +K+V+ NDD  REL+FY QA +  ++A  +  +LG+  LRP+D
Sbjct: 104 DLPWVETLEVVTPHSEMDKKVE-NDDFQRELNFYKQAEKAVQIAYPRLLNLGIKVLRPTD 163

Query: 134 YYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERAKQKKED 193
           YYAEM K+DTHM+KV+ RLL  Q+  E  E  R+ RE KK + ++Q + L  +  +KK  
Sbjct: 164 YYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREEKKFAVKVQKEVLAAKNTEKKNL 223

Query: 194 IESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGGKTRHG- 253
            E+VKK +K  ++           L+    +VK          P  + GDR GG+   G 
Sbjct: 224 AEAVKKHKKGMKQ----------QLEDMLNNVKRHGLDQDDDAPTGAFGDRLGGRGGAGR 283

Query: 254 GGGGKG----NYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNG 291
           GG G+G    N  + KR  K+ KFG+GG+K   K+N  E+ ND+ G   G
Sbjct: 284 GGAGRGGSMRNAGELKRKLKSDKFGYGGKKKGMKRNNKESFNDLFGAPRG 320

[Close]

BLAST of Sed0011284.1 vs. ExPASy Swiss-Prot
Match: Q9D903 (Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-19
Identity = 95/300 (31.67%), Postives = 150/300 (50.00%), Query Frame = 0


Query: 16  MEDEDLGSEDSDFESESESDMEEED------------VKLSEPSKNAVYNADGLLDKLGD 75
           M+   L   DS+ ++   SD E +D            V L +P K AV +  GL   L +
Sbjct: 1   MDTPPLSESDSESDACLASDQELQDAFSRGLLKPGLNVVLEKP-KKAVNDVSGLKQCLAE 60

Query: 76  ISWPENVEWIHKLSLDI----------------DQEKEVDVNDDLARELSFYTQALQGTR 135
             +  ++EW+ +L + +                DQ+K V+  DD  RE+SFY QA     
Sbjct: 61  --FRRDLEWVERLDVTLGPVPEVSETQPTPQNQDQKKGVNPEDDFQREMSFYRQAQAAVL 120

Query: 136 MALEKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLS 195
             L +   L +P  RP+DY+AEM K+D  M+K++ +L ++Q  ME++E+ ++ R  +K  
Sbjct: 121 AVLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYG 180

Query: 196 KEIQAQKLKERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKK 255
           K++Q + L++R ++K   + ++KK++K     GF+  DK   LD    D K  ERS    
Sbjct: 181 KKVQTEVLQKRQREKAHMMNAIKKYQK-----GFS--DK---LDFLEGDQKPVERSA--- 240

Query: 256 RPGVSPGDRSGGKTRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGF 288
                   ++GGK +    G     P  KR  KN KFGFGG+K   K NT E+ +D+  F
Sbjct: 241 --------KAGGKGQQMSKG-----PNAKRRYKNQKFGFGGKKKGSKWNTKESYDDVSSF 271

[Close]

BLAST of Sed0011284.1 vs. ExPASy Swiss-Prot
Match: P36049 (rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=EBP2 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 91/308 (29.55%), Postives = 154/308 (50.00%), Query Frame = 0


Query: 6   KDTSFLNEDAMEDEDLGSEDSDFESESESDMEEEDVKLSEPS-----------KNAVYNA 65
           +D S    D+ EDED+ +++   E E +   EE+DV LS+             K  V N 
Sbjct: 141 EDDSESENDSEEDEDVVAKEESEEKEEQE--EEQDVPLSDVEFDSDADVVPHHKLTVNNT 200

Query: 66  DGLLDKLGDISWP---ENVEWIHKLSLDIDQEKEV-DVNDDLARELSFYTQALQGTRMAL 125
             +   L  +  P    + +    ++ + + ++ + D+ DD  REL+FY Q+L    +A 
Sbjct: 201 KAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSLDAVLVAR 260

Query: 126 EKFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEI 185
           ++ + L +PF RP DY+AEMVK+D HM+K+KG+L+ E    +  EE R+ R+ KK  K++
Sbjct: 261 DELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQV 320

Query: 186 QAQKLKERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPG 245
           Q   L++R  +K+E +E +K  + +R         K  ++D S  +V   E   GK+   
Sbjct: 321 QNATLQKRQLEKRETLEKIKSLKNKR---------KHNEIDHSEFNVGVEEEVEGKR--- 380

Query: 246 VSPGDRSGGKTRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNG 299
               DR                P  KR +KN+K+G GG K  K++N + ++ D+ GF++ 
Sbjct: 381 ---FDR--------------GRPNGKRAAKNAKYGQGGMKRFKRKNDATSSADVSGFSSR 417

[Close]

BLAST of Sed0011284.1 vs. ExPASy Swiss-Prot
Match: Q9I8J6 (Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17
Identity = 91/306 (29.74%), Postives = 143/306 (46.73%), Query Frame = 0


Query: 17  EDEDLGSEDSDFESESESDMEEEDV----KLS-------EPSKNAVYNADGLLDKLGDIS 76
           EDE     DSDF++   +D E ++     KL        E  K    +A GL   L D+ 
Sbjct: 5   EDESSPESDSDFDASELTDKELQEAFSQGKLKPGLNVVLEGKKKPFNDASGLKQSLKDLK 64

Query: 77  WPENVEWIHKLSLDID--------------QEKEVDVNDDLARELSFYTQALQGTRMALE 136
               + W+ +L + +D                 +++  DD  RE+ FY QA      +L 
Sbjct: 65  --NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAEDDFQREMCFYRQAQAAVLYSLP 124

Query: 137 KFQSLGLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQ 196
           + + L +   RP DY+AEM KTD HM+K++ +L  +Q  ME++E+ ++ R  +K  K++Q
Sbjct: 125 RLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKYGKKVQ 184

Query: 197 AQKLKERAKQKKEDIESVKKWRK-QRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPG 256
            + L++R K+K   +  +KK++K    K  F  GD+                   KK P 
Sbjct: 185 VEVLQKRQKEKSAMVTQIKKYQKGLSDKLDFLEGDQ-----------------TPKKTPN 244

Query: 257 VSPGDRSGGKTRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNG 297
            + G  +  K +        N P  KR  K+ KFGFGG+K   K NT  + ND+ GF  G
Sbjct: 245 KTGGSAAAQKAK--------NTPSAKRRYKDQKFGFGGKKKGSKGNTKGSYNDVSGF-RG 282

[Close]

BLAST of Sed0011284.1 vs. ExPASy TrEMBL
Match: A0A5D3DB33 (Putative rRNA-processing protein EBP2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001370 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.9e-130
Identity = 262/306 (85.62%), Postives = 284/306 (92.81%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESE----SESDMEEEDVKLSEPSKNAVYNADG 60
           MGVS KD  FLNED +ED+DL SEDS+FESE    SES+ EEEDV+LSEPSKNA+YNADG
Sbjct: 10  MGVSIKDAEFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 69

Query: 61  LLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSL 120
           LLDKLGDISWPENVEWIHKL+ DIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSL
Sbjct: 70  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 129

Query: 121 GLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLK 180
           GLPFLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK K
Sbjct: 130 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 189

Query: 181 ERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDR 240
           ERAKQKKE+IESVKKWRKQRQK+ FAGGDKGGD+D SF+D K FERSGGKKRPGVSPGDR
Sbjct: 190 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 249

Query: 241 SGGKTRH-GGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSN 300
           SGGK RH GGGGGKG   KKKRD ++SKFGFGGRKSLKKQNT+ETTNDIRGFNNGSLS+N
Sbjct: 250 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 309

Query: 301 KKRKRS 302
           K+RK+S
Sbjct: 310 KRRKKS 315

[Close]

BLAST of Sed0011284.1 vs. ExPASy TrEMBL
Match: A0A1S3CT69 (probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC103504670 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.9e-130
Identity = 262/306 (85.62%), Postives = 284/306 (92.81%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESE----SESDMEEEDVKLSEPSKNAVYNADG 60
           MGVS KD  FLNED +ED+DL SEDS+FESE    SES+ EEEDV+LSEPSKNA+YNADG
Sbjct: 1   MGVSIKDADFLNEDTVEDDDLSSEDSEFESESESGSESEEEEEDVELSEPSKNAIYNADG 60

Query: 61  LLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSL 120
           LLDKLGDISWPENVEWIHKL+ DIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSL
Sbjct: 61  LLDKLGDISWPENVEWIHKLTFDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSL 120

Query: 121 GLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLK 180
           GLPFLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK K
Sbjct: 121 GLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQK 180

Query: 181 ERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDR 240
           ERAKQKKE+IESVKKWRKQRQK+ FAGGDKGGD+D SF+D K FERSGGKKRPGVSPGDR
Sbjct: 181 ERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGDR 240

Query: 241 SGGKTRH-GGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSN 300
           SGGK RH GGGGGKG   KKKRD ++SKFGFGGRKSLKKQNT+ETTNDIRGFNNGSLS+N
Sbjct: 241 SGGKARHGGGGGGKGKNLKKKRDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNGSLSNN 300

Query: 301 KKRKRS 302
           K+RK+S
Sbjct: 301 KRRKKS 306

[Close]

BLAST of Sed0011284.1 vs. ExPASy TrEMBL
Match: A0A0A0KL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169110 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129
Identity = 261/312 (83.65%), Postives = 283/312 (90.71%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESES-----DMEEEDVKLSEPSKNAVYNAD 60
           MGVS KD SFLNED +ED D  SEDS+FESESES     + EEEDV+LSEPSKNA+YNAD
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 61  GLLDKLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQS 120
           GLLDKLGDISWPENVEWIHKL+ DI+QEKEVDVNDDL REL+FYTQALQGTRMALEKFQS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 121 LGLPFLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKL 180
           LGLPFLRPSDYYAEMVKTDTHM+KVKGRLLSEQ++MEEAEERRKAREAKKL+KEIQAQK 
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQ 180

Query: 181 KERAKQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGD 240
           KERAKQKKE+IESVKKWRKQRQK+ FAGGDKGGD+D SF+D K FERSGGKKRPGVSPGD
Sbjct: 181 KERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 241 RSGGKTRH------GGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNN 300
           RSGGK RH      GGGGGKG  PKKKRD ++SKFGFGGRKSLKKQNT++TTNDIRGFNN
Sbjct: 241 RSGGKARHGGGGGGGGGGGKGKIPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNN 300

Query: 301 GSLSSNKKRKRS 302
           GSLSSNK+RK+S
Sbjct: 301 GSLSSNKRRKKS 312

[Close]

BLAST of Sed0011284.1 vs. ExPASy TrEMBL
Match: A0A6J1IZU9 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111480644 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128
Identity = 258/301 (85.71%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESESDMEEEDVKLSEPSKNAVYNADGLLDK 60
           MGVSDKD  FLNED ME++DL +EDSDFESESES  EEE+VKLSEPSK A+YNADGLLDK
Sbjct: 1   MGVSDKDARFLNEDTMENDDLSNEDSDFESESESGEEEEEVKLSEPSKTAIYNADGLLDK 60

Query: 61  LGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLPF 120
           L DISWP+NVEWIH+L LDIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSLGLPF
Sbjct: 61  LEDISWPKNVEWIHRLCLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLPF 120

Query: 121 LRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERAK 180
           LRPSDYYAEMVKTDTHM KVKGRLL+EQ++MEEAEERRKAREAKKL+KEIQAQKLKERAK
Sbjct: 121 LRPSDYYAEMVKTDTHMGKVKGRLLAEQRKMEEAEERRKAREAKKLAKEIQAQKLKERAK 180

Query: 181 QKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGGK 240
           QKKE+IESVKKWRKQRQKSGFAGGDKGG+++LSF+D KAFERSGGKKRPGVSPGDRSGGK
Sbjct: 181 QKKEEIESVKKWRKQRQKSGFAGGDKGGEMELSFEDGKAFERSGGKKRPGVSPGDRSGGK 240

Query: 241 TRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSNKKRKR 300
            RH   GGKG   KKK+D ++SKFGFGGRKSLKKQNT+ETTNDIRGFNN SL SNK+RKR
Sbjct: 241 ARH-RNGGKGKNLKKKKDFRDSKFGFGGRKSLKKQNTAETTNDIRGFNNDSLLSNKRRKR 300

Query: 301 S 302
           S
Sbjct: 301 S 300

[Close]

BLAST of Sed0011284.1 vs. ExPASy TrEMBL
Match: A0A6J1H264 (probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459763 PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 6.6e-128
Identity = 263/302 (87.09%), Postives = 282/302 (93.38%), Query Frame = 0


Query: 1   MGVSDKDTSFLNEDAMEDEDLGSEDSDFESESESDM-EEEDVKLSEPSKNAVYNADGLLD 60
           MGVSD+  SFLNED MED+DL SEDSDF SESES+  EEEDVKLSEPSKNA+YNADGLLD
Sbjct: 1   MGVSDEKDSFLNEDTMEDDDLDSEDSDFGSESESESEEEEDVKLSEPSKNAIYNADGLLD 60

Query: 61  KLGDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLP 120
           KLGDISWPENV WIHKLSLDIDQEKEVDVNDDLAREL+FYTQALQGTRMALEKFQSLGLP
Sbjct: 61  KLGDISWPENVGWIHKLSLDIDQEKEVDVNDDLARELAFYTQALQGTRMALEKFQSLGLP 120

Query: 121 FLRPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERA 180
           FLRP DYYAEMVKTDTHM KVKGRLL EQK+MEEAEERRKAREAKKL+KEIQAQKLKERA
Sbjct: 121 FLRPPDYYAEMVKTDTHMVKVKGRLLMEQKKMEEAEERRKAREAKKLAKEIQAQKLKERA 180

Query: 181 KQKKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGG 240
           KQKKE+IESVKKWRKQRQKSGF+  DKGG++DLSF+D KAF+RSGGKKRPGVSPGDRSGG
Sbjct: 181 KQKKEEIESVKKWRKQRQKSGFS--DKGGEMDLSFEDGKAFDRSGGKKRPGVSPGDRSGG 240

Query: 241 KTRHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIRGFNNGSLSSNKKRK 300
           K RH GGGGKG  P KKRD ++SKFGFGGRKS+KKQNT+ETTNDIRGFNNGSLSSNK+RK
Sbjct: 241 KARH-GGGGKGKNP-KKRDFRDSKFGFGGRKSMKKQNTAETTNDIRGFNNGSLSSNKRRK 298

Query: 301 RS 302
           +S
Sbjct: 301 KS 298

[Close]

BLAST of Sed0011284.1 vs. TAIR 10
Match: AT3G22660.1 (rRNA processing protein-related )

HSP 1 Score: 305.4 bits (781), Expect = 4.9e-83
Identity = 181/300 (60.33%), Postives = 231/300 (77.00%), Query Frame = 0


Query: 3   VSDKDTSFLNEDAMEDEDLGSEDSDFESESESDMEEE-DVKLSEPSKNAVYNADGLLDKL 62
           VSD + + ++ED        + DS+ ES S+SD E E   KL+EP+K A+YN DGLLDKL
Sbjct: 8   VSDDEMNMIDED-------DATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKL 67

Query: 63  GDISWPENVEWIHKLSLDIDQEKEVDVNDDLARELSFYTQALQGTRMALEKFQSLGLPFL 122
            DISWPE+V+W HKL+++IDQ   VDVNDDLARE +FYTQAL+GTR A  K   +G+ FL
Sbjct: 68  QDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFL 127

Query: 123 RPSDYYAEMVKTDTHMEKVKGRLLSEQKRMEEAEERRKAREAKKLSKEIQAQKLKERAKQ 182
           RP++YYAEMVK+D HMEKVK RLL E+K++EE+EERRKAR+ K+++KE+Q+QK+KERAK+
Sbjct: 128 RPANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKE 187

Query: 183 KKEDIESVKKWRKQRQKSGFAGGDKGGDLDLSFKDVKAFERSGGKKRPGVSPGDRSGGKT 242
           KK++IESVKKWRKQRQ+SGF+  DK G+ +L F+  K+F+R GGKKRPGVSPGDRSGGK 
Sbjct: 188 KKDNIESVKKWRKQRQQSGFS--DKAGEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKG 247

Query: 243 RHGGGGGKGNYPKKKRDSKNSKFGFGGRKSLKKQNTSETTNDIR-GFNNGSLSSNKKRKR 301
           R     G      KKR+ ++SKFG GGRK L KQNT+ETTND + GF  G  S NK++KR
Sbjct: 248 RPTSRMG-----NKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

The following BLAST results are available for this feature:

BLAST of Sed0011284.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876320.1	4.5e-131	87.09	probable rRNA-processing protein EBP2 homolog [Benincasa hispida]	[more]
XP_008467285.1	3.8e-130	85.62	PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis melo]	[more]
KAA0055124.1	3.8e-130	85.62	putative rRNA-processing protein EBP2-like protein [Cucumis melo var. makuwa] >T...	[more]
XP_004143659.2	2.5e-129	83.65	probable rRNA-processing protein EBP2 homolog [Cucumis sativus] >KGN50375.1 hypo...	[more]
XP_022981565.1	6.1e-128	85.71	probable rRNA-processing protein EBP2 homolog [Cucurbita maxima]	[more]

BLAST of Sed0011284.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUJ5	6.9e-82	60.33	Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q09958	1.3e-19	33.10	Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans OX=6239 ...	[more]
Q9D903	8.3e-19	31.67	Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 ...	[more]
P36049	1.1e-18	29.55	rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]
Q9I8J6	2.0e-17	29.74	Probable rRNA-processing protein EBP2 OS=Xenopus laevis OX=8355 GN=ebna1bp2 PE=2...	[more]

BLAST of Sed0011284.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB33	1.9e-130	85.62	Putative rRNA-processing protein EBP2-like protein OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CT69	1.9e-130	85.62	probable rRNA-processing protein EBP2 homolog OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A0A0KL02	1.2e-129	83.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169110 PE=3 SV=1	[more]
A0A6J1IZU9	3.0e-128	85.71	probable rRNA-processing protein EBP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1H264	6.6e-128	87.09	probable rRNA-processing protein EBP2 homolog OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Sed0011284.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22660.1	4.9e-83	60.33	rRNA processing protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..40
None	No IPR available	PANTHER	PTHR13028:SF2	BNAA01G24550D PROTEIN	coord: 16..300
IPR008610	Eukaryotic rRNA processing	PFAM	PF05890	Ebp2	coord: 29..298 e-value: 4.5E-74 score: 249.4
IPR008610	Eukaryotic rRNA processing	PANTHER	PTHR13028	RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED	coord: 16..300

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0011284	Sed0011284	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011284.1-five_prime_utr	Sed0011284.1-five_prime_utr-LG05:4233059..4233149	five_prime_UTR
Sed0011284.1-five_prime_utr	Sed0011284.1-five_prime_utr-LG05:4234472..4234477	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011284.1-exon	Sed0011284.1-exon-LG05:4233059..4233149	exon
Sed0011284.1-exon	Sed0011284.1-exon-LG05:4234472..4235697	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011284.1-cds	Sed0011284.1-cds-LG05:4234478..4235383	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011284.1-three_prime_utr	Sed0011284.1-three_prime_utr-LG05:4235384..4235697	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0011284.1	Sed0011284.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006096	glycolytic process
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034399	nuclear periphery
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000015	phosphopyruvate hydratase complex
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004634	phosphopyruvate hydratase activity