Sed0011139.1 (mRNA) Chayote v1

Overview


Name	Sed0011139.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	DNA oxidative demethylase ALKBH2
Location	LG10: 3552578 .. 3554603 (-)
Sequence length	729
RNA-Seq Expression	Sed0011139.1
Synteny	Sed0011139.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGAGGTTCAAAGAAGTGGCCGATTCAGAATCGGAGACGACGATCCCACGTCCGATCGATTCAAGGAAGCAGACATTTGATCTTGGAAATGGAAGCGAAATCCTCTACTTTTCCAAGTTCGCGCCCTCCGATCGGGCTTGGACGTGGTTCGATTTTCTCAATCAGCACATTCCATGGACCAGGCCGACCATTCGCGTCTTCGGCCGCTCCGTCGTTCAGGTCTTCTCCATTCTCGATTCTGCTCTCTATTTTCACTTTGTTGTAATGCTGATTATGAACTGATGATTTAGCAATTGACCCTTGGTGTTCTTCCATGATTTTTTGCCTTTTCGGCCATTCTTAGAATTAGGGTTTTACGTTCTTTCTAATGGGTCTTATTAGATAACGTGGGCATCTATCTCAGAACCAATTGGTGATAGAGAGGATTAGTCCACCTATAATGTGGACAGAACCCATGGTCTTTGGTGTTAGGGACAACAAACAACCACAAACCTCCACATTGATGTGATATTGTCCACTTTGGGAATCACCCCTTATGACTTTGTTTTTTGGCATCTCCCAAAATGCCTCACATCAATGGAGGTGTTGTCCCCTCCTTATATACCCAAGATCTTCCCCCTAATTTAGCAATGTGAGATACTTTGTTTACCCAACATTCAATCCAATAAAAATAAAATTGAGATTCGATTTAAGATTGATGAGTCCAAAGAGACATCGTACGTTAGGATCGCACATCGAAAAGAATGGAGACCTCATGGCAATATATAAGAGAGGTGGATTCTCCTCATCACCAATTAATTTTGAGATGGATGTTCACGCTATTTAATATGGTATAGAATACAATTAAGCTCAAAAGAGGCACAATCTTAAGGAACATGTTCTCACATCGGGAAGATTGAAGACCTTATAGCAATATATAAGAAAGGATCACTAATTGGTTTTGTGATGGATGTTCACGCAATCTAATAGATCTTAGGATTTTTTCATGCAATATGTGGTTAAGTTTATGTTGTGATTTGCTAATGCAGCCTAGAGATACTTGTTACGTTGCGAGTCCTGGATTGGCGACATTAACTTATAGTGGGTATAAACCTCATGCCTATACTTGGGATGATTTTCCTCCTCTTAAGGACATTTTGAATGCTGTAAGACTTTTTTTGTTTGGATCTTTTGGCTTCTGTAACTACAAGTTTTCTTTACTAGTCGCTTCTTAGTTCTTATGTCTTCCCAATTTTCCTTTGTGAAGGTCCACGAAGCTCTTCCAGGGAGTAGTTTTAATAGCTTACTCTTGAACAGGTATAAAGGTGGTAATGATTATGTGGGTTGGCATTCTGATGATGAGAAACTTTATGGATTGAACCAGGAGATTGCTTCTGTATCATTTGGGTGTGAACGAGACTTCCTGTTGAAAAAAAAGTCCAACAAAACTTCTCAAAGTATTCGGTCTATTTCATCTGTTTTTTTTGTCTCTGTTCTGATTTTTTTTTTTTTTTGATATTCATGACTGTTCAGGTCAATTTATGCGCACCTCAACTATTTTCACTAGATTTACCGTTTGATACTACAACATTTGGAAGTCAAAATAACTAGTAGAAAATTATTTTTTTCGTAATTGATTACCATGAATTGAACTCACCACCTCTTAGTTTGTTATAACACTCTTTGACTAGTAGGCCACTCCATGGTTGACCACTAGGCCACTCCATGTTGTCTCTGTCCTAAATTTGAAAACCTCTTTTCTCAAATTTTTGGTCTTTTTTCTCAATTGCTTTCTTCGCTTCAAAAAGTTCTACCTTCTTATGATTTATGTAATGTGGCCCCAGGAAGAAATGATGAGGAACCTCCAAGCAAGAAATCAAAGAAAAGCAGCGTGGCTGATACACACTCATTTGTGCTAAAGCATGGTTCACTTTTGGTTATGAAAGGCTACACTCAACGAGATTGGATGCATTCGGTCCCTAAGCGCCTCAAGGCAGAGGCAACTCGCATCAACCTTACTTTCAGGCACGTTGTTGTTTGA

mRNA sequence

ATGAGTTTGAGGTTCAAAGAAGTGGCCGATTCAGAATCGGAGACGACGATCCCACGTCCGATCGATTCAAGGAAGCAGACATTTGATCTTGGAAATGGAAGCGAAATCCTCTACTTTTCCAAGTTCGCGCCCTCCGATCGGGCTTGGACGTGGTTCGATTTTCTCAATCAGCACATTCCATGGACCAGGCCGACCATTCGCGTCTTCGGCCGCTCCGTCGTTCAGCCTAGAGATACTTGTTACGTTGCGAGTCCTGGATTGGCGACATTAACTTATAGTGGGTATAAACCTCATGCCTATACTTGGGATGATTTTCCTCCTCTTAAGGACATTTTGAATGCTGTCCACGAAGCTCTTCCAGGGAGTAGTTTTAATAGCTTACTCTTGAACAGGTATAAAGGTGGTAATGATTATGTGGGTTGGCATTCTGATGATGAGAAACTTTATGGATTGAACCAGGAGATTGCTTCTGTATCATTTGGGTGTGAACGAGACTTCCTGTTGAAAAAAAAGTCCAACAAAACTTCTCAAAGAAGAAATGATGAGGAACCTCCAAGCAAGAAATCAAAGAAAAGCAGCGTGGCTGATACACACTCATTTGTGCTAAAGCATGGTTCACTTTTGGTTATGAAAGGCTACACTCAACGAGATTGGATGCATTCGGTCCCTAAGCGCCTCAAGGCAGAGGCAACTCGCATCAACCTTACTTTCAGGCACGTTGTTGTTTGA

Coding sequence (CDS)

ATGAGTTTGAGGTTCAAAGAAGTGGCCGATTCAGAATCGGAGACGACGATCCCACGTCCGATCGATTCAAGGAAGCAGACATTTGATCTTGGAAATGGAAGCGAAATCCTCTACTTTTCCAAGTTCGCGCCCTCCGATCGGGCTTGGACGTGGTTCGATTTTCTCAATCAGCACATTCCATGGACCAGGCCGACCATTCGCGTCTTCGGCCGCTCCGTCGTTCAGCCTAGAGATACTTGTTACGTTGCGAGTCCTGGATTGGCGACATTAACTTATAGTGGGTATAAACCTCATGCCTATACTTGGGATGATTTTCCTCCTCTTAAGGACATTTTGAATGCTGTCCACGAAGCTCTTCCAGGGAGTAGTTTTAATAGCTTACTCTTGAACAGGTATAAAGGTGGTAATGATTATGTGGGTTGGCATTCTGATGATGAGAAACTTTATGGATTGAACCAGGAGATTGCTTCTGTATCATTTGGGTGTGAACGAGACTTCCTGTTGAAAAAAAAGTCCAACAAAACTTCTCAAAGAAGAAATGATGAGGAACCTCCAAGCAAGAAATCAAAGAAAAGCAGCGTGGCTGATACACACTCATTTGTGCTAAAGCATGGTTCACTTTTGGTTATGAAAGGCTACACTCAACGAGATTGGATGCATTCGGTCCCTAAGCGCCTCAAGGCAGAGGCAACTCGCATCAACCTTACTTTCAGGCACGTTGTTGTTTGA

Protein sequence

MSLRFKEVADSESETTIPRPIDSRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHIPWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRRNDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRHVVV

Homology

[Close]

BLAST of Sed0011139.1 vs. NCBI nr
Match: KAG6603836.1 (DNA oxidative demethylase ALKBH2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 222/241 (92.12%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 1   MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 60

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL T +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 61  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 120

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 180

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH
Sbjct: 181 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240

[Close]

BLAST of Sed0011139.1 vs. NCBI nr
Match: XP_022950477.1 (DNA oxidative demethylase ALKBH2 isoform X2 [Cucurbita moschata] >KAG7034017.1 DNA oxidative demethylase ALKBH2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 222/241 (92.12%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 15  MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 74

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL T +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 75  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 134

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 135 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 194

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH
Sbjct: 195 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 254

[Close]

BLAST of Sed0011139.1 vs. NCBI nr
Match: XP_022950476.1 (DNA oxidative demethylase ALKBH2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-125
Identity = 220/239 (92.05%), Postives = 227/239 (94.98%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 15  MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 74

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL T +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 75  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 134

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 135 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 194

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 239
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR
Sbjct: 195 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 253

[Close]

BLAST of Sed0011139.1 vs. NCBI nr
Match: XP_038882915.1 (DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882916.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882917.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882918.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882919.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882920.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882921.1 DNA oxidative demethylase ALKBH2 [Benincasa hispida])

HSP 1 Score: 458.0 bits (1177), Expect = 5.1e-125
Identity = 218/243 (89.71%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPIDS-RKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLR KEV DSESET IPRP +S R+QT DLGNGSEI+Y  KF PSD+AWTWFDFLNQ I
Sbjct: 1   MSLRLKEVTDSESETKIPRPFNSGRRQTLDLGNGSEIVYVPKFVPSDQAWTWFDFLNQRI 60

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSV+QPRDTCYVA+PGL TLTYSGYKPHAYTWDDFPPLKDIL+AVHEAL
Sbjct: 61  PWTRPTIRVFGRSVLQPRDTCYVANPGLTTLTYSGYKPHAYTWDDFPPLKDILDAVHEAL 120

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEK+Y LNQEIASVSFGCERDFLLKKK NKTSQRR
Sbjct: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFLLKKKPNKTSQRR 180

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240
           NDEEPP+KKSKKSSVAD+HSFVLKHGSLLVM+GYTQRDWMHSVPKRLKAEATRINLTFRH
Sbjct: 181 NDEEPPAKKSKKSSVADSHSFVLKHGSLLVMRGYTQRDWMHSVPKRLKAEATRINLTFRH 240

Query: 241 VVV 243
           V+V
Sbjct: 241 VIV 243

[Close]

BLAST of Sed0011139.1 vs. NCBI nr
Match: XP_022977708.1 (DNA oxidative demethylase ALKBH2 [Cucurbita maxima])

HSP 1 Score: 458.0 bits (1177), Expect = 5.1e-125
Identity = 219/239 (91.63%), Postives = 226/239 (94.56%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 15  MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 74

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL   +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 75  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTIYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 134

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 135 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 194

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 239
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR
Sbjct: 195 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 253

[Close]

BLAST of Sed0011139.1 vs. ExPASy Swiss-Prot
Match: Q9SIE0 (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2)

HSP 1 Score: 318.9 bits (816), Expect = 4.8e-86
Identity = 154/243 (63.37%), Postives = 188/243 (77.37%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPIDSRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHIP 60
           MSL      +S S +  P    SRK T DLG+GS+++Y  +F P  ++WT+FD+L++HIP
Sbjct: 77  MSLTSIVAVESPSSSNAP----SRK-TIDLGHGSDLIYIQRFLPFQQSWTFFDYLDKHIP 136

Query: 61  WTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEALP 120
           WTRPTIRVFGRS +QPRDTCYVAS GL  L YSGY+P +Y+WDDFPPLK+IL+A+++ LP
Sbjct: 137 WTRPTIRVFGRSCLQPRDTCYVASSGLTALVYSGYRPTSYSWDDFPPLKEILDAIYKVLP 196

Query: 121 GSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQ--R 180
           GS FNSLLLNRYKG +DYV WH+DDEK+YG   EIASVSFGCERDF+LKKK ++ S   +
Sbjct: 197 GSRFNSLLLNRYKGASDYVAWHADDEKIYGPTPEIASVSFGCERDFVLKKKKDEESSQGK 256

Query: 181 RNDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 240
             D  P  K+ K+SS  D  S  LKHGSLLVM+GYTQRDW+HSVPKR KAE TRINLTFR
Sbjct: 257 TGDSGPAKKRLKRSSREDQQSLTLKHGSLLVMRGYTQRDWIHSVPKRAKAEGTRINLTFR 314

Query: 241 HVV 242
            V+
Sbjct: 317 LVL 314

[Close]

BLAST of Sed0011139.1 vs. ExPASy Swiss-Prot
Match: Q96Q83 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens OX=9606 GN=ALKBH3 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.9e-22
Identity = 82/244 (33.61%), Postives = 111/244 (45.49%), Query Frame = 0


Query: 5   FKEVADSESETTIPRPIDSRKQTFDLG----NGSEILYFSKFAPSDRAWTWFDFLNQHIP 64
           FKE          PR ID R+  +++       S +  +  F     A    + L Q +P
Sbjct: 56  FKEPQQVVRRAPEPRVID-REGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVP 115

Query: 65  WTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGY----KPHAYTWDDFPPLKDILNAVH 124
           W + T      +  QPR T +    G    TYS       PH   W   P L+ + N + 
Sbjct: 116 WKQRTGIREDITYQQPRLTAWY---GELPYTYSRITMEPNPH---W--HPVLRTLKNRIE 175

Query: 125 EALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTS 184
           E   G +FNSLL N Y+   D V WHSDDE   G    IAS+SFG  R F ++KK     
Sbjct: 176 EN-TGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKK----- 235

Query: 185 QRRNDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLT 241
                  PP +++   +  +     L HG+LL+M+G TQ DW H VPK   +   R+NLT
Sbjct: 236 -------PPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLT 277

[Close]

BLAST of Sed0011139.1 vs. ExPASy Swiss-Prot
Match: Q32L00 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus OX=9913 GN=ALKBH3 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-21
Identity = 82/244 (33.61%), Postives = 111/244 (45.49%), Query Frame = 0


Query: 5   FKEVADSESETTIPRPIDSRKQTFDLGNG----SEILYFSKFAPSDRAWTWFDFLNQHIP 64
           FKE  +       PR I+ ++  +++       S +     F     A + F+ L + +P
Sbjct: 56  FKEPQEGVRRAPEPRVIE-KEGVYEISMSPTGISRVCLCPGFVDLKEADSVFEQLCRDVP 115

Query: 65  WTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGY----KPHAYTWDDFPPLKDILNAVH 124
           W + T      +  QPR T +    G    TYS       PH   W   P L  + N + 
Sbjct: 116 WKQRTGIRDDVTYQQPRLTAWY---GELPYTYSRITMEPNPH---W--HPVLLMLKNQIE 175

Query: 125 EALPGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTS 184
           E   G SFNSLL N Y+   D V WHSDDE   G    IAS+SFG  R F ++KK     
Sbjct: 176 EN-TGHSFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRMFEMRKK----- 235

Query: 185 QRRNDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLT 241
                  PP + +   +  +     L HG+LL+M+G TQ DW H VPK   +   RINLT
Sbjct: 236 -------PPPEDNGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRINLT 277

[Close]

BLAST of Sed0011139.1 vs. ExPASy Swiss-Prot
Match: Q58DM4 (DNA oxidative demethylase ALKBH2 OS=Bos taurus OX=9913 GN=ALKBH2 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.3e-21
Identity = 65/176 (36.93%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 66  IRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEALPGSSFN 125
           ++VFG+    PR        GL T T+SG       W   P L+ + + V   + G +FN
Sbjct: 98  VQVFGKWHSVPRKQATYGDTGL-TYTFSGLTLSPKPW--IPVLERVRDRV-SLVTGQTFN 157

Query: 126 SLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRRNDEEPP 185
            +L+NRYK G D++G H DDE+   L   IASVSFG  RDF+ + K ++          P
Sbjct: 158 FVLINRYKDGQDHIGEHRDDERELALGSPIASVSFGACRDFVFRHKDSRGKH-------P 217

Query: 186 SKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRHVV 242
           S++       +     L HGSLL+M   T   W HS+P R K  A R+NLTFR ++
Sbjct: 218 SRR------LEVVRLQLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 256

[Close]

BLAST of Sed0011139.1 vs. ExPASy Swiss-Prot
Match: Q5XIC8 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus OX=10116 GN=Alkbh3 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.9e-20
Identity = 77/231 (33.33%), Postives = 106/231 (45.89%), Query Frame = 0


Query: 18  PRPIDSRKQTFDLG----NGSEILYFSKFAPSDRAWTWFDFLNQHIPWTRPTIRVFGRSV 77
           PR ID R+  +++       S +  +  F     A    + L Q +PW +        + 
Sbjct: 69  PRVID-REGVYEISLSPTGVSRVCLYPGFVDLKEADWILERLCQDVPWKQRMGIREDITY 128

Query: 78  VQPRDTCYVASPGLATLTYSGY----KPHAYTWDDFPPLKDILNAVHEALPGSSFNSLLL 137
            QPR T +    G    TYS       PH   W   P L  + + + E   G +FNSLL 
Sbjct: 129 PQPRLTAWY---GELPYTYSRVTMEPNPH---W--LPVLWTLKSRIEEN-TGHTFNSLLC 188

Query: 138 NRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRRNDEEPPSKKS 197
           N Y+   D V WHSDDE   G    IAS+SFG  R F ++KK            PP +++
Sbjct: 189 NFYRDEKDSVDWHSDDEPSLGSCPVIASLSFGATRTFEMRKK------------PPPEEN 248

Query: 198 KKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRHV 241
              +  +     L HG+LL+M+G TQ DW H VPK   +   R+NLTFR V
Sbjct: 249 GDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSRERRVNLTFRTV 277

[Close]

BLAST of Sed0011139.1 vs. ExPASy TrEMBL
Match: A0A6J1GEX9 (DNA oxidative demethylase ALKBH2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453571 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 222/241 (92.12%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 15  MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 74

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL T +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 75  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 134

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 135 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 194

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH
Sbjct: 195 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 254

[Close]

BLAST of Sed0011139.1 vs. ExPASy TrEMBL
Match: A0A6J1GEX8 (DNA oxidative demethylase ALKBH2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453571 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.0e-126
Identity = 220/239 (92.05%), Postives = 227/239 (94.98%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 15  MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 74

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL T +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 75  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTTYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 134

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 135 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 194

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 239
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR
Sbjct: 195 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 253

[Close]

BLAST of Sed0011139.1 vs. ExPASy TrEMBL
Match: A0A6J1IQU8 (DNA oxidative demethylase ALKBH2 OS=Cucurbita maxima OX=3661 GN=LOC111477932 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 219/239 (91.63%), Postives = 226/239 (94.56%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP+D  R+QT DLGNGSEI+Y SKF  SD+AWTWFDFLNQHI
Sbjct: 15  MSLRFKEVIDSESETKIPRPLDLGRRQTLDLGNGSEIVYISKFVSSDQAWTWFDFLNQHI 74

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRSVVQPRDTCYV +PGL   +YSGYKPHAYTWDDFPPLKDILNAVHEAL
Sbjct: 75  PWTRPTIRVFGRSVVQPRDTCYVVNPGLTIYSYSGYKPHAYTWDDFPPLKDILNAVHEAL 134

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKKSNKTSQRR
Sbjct: 135 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKSNKTSQRR 194

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 239
           NDEEPP+KKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR
Sbjct: 195 NDEEPPAKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 253

[Close]

BLAST of Sed0011139.1 vs. ExPASy TrEMBL
Match: A0A6J1BTV9 (DNA oxidative demethylase ALKBH2 OS=Momordica charantia OX=3673 GN=LOC111005717 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.6e-124
Identity = 217/243 (89.30%), Postives = 227/243 (93.42%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           M+LR KEV DSESET IPRP+D  R+ T DLGNGSEI+Y +KF PSD+AWTWFDFLNQ I
Sbjct: 9   MTLRLKEVTDSESETRIPRPLDLGRRHTLDLGNGSEIVYMTKFVPSDKAWTWFDFLNQRI 68

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTIRVFGRS++QPRDTCYVASPGL TLTYSGYKP AYTWDDFPPLK+IL+AVHEAL
Sbjct: 69  PWTRPTIRVFGRSLLQPRDTCYVASPGLTTLTYSGYKPRAYTWDDFPPLKEILDAVHEAL 128

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGSSFNSLLLNRYKGGNDYVGWHSDDEKLY LNQEIASVSFGCERDFLLKKK NKTSQRR
Sbjct: 129 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYALNQEIASVSFGCERDFLLKKKPNKTSQRR 188

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240
           NDEEPPSKKSKKS VADTHSF LKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH
Sbjct: 189 NDEEPPSKKSKKSGVADTHSFALKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 248

Query: 241 VVV 243
           VVV
Sbjct: 249 VVV 251

[Close]

BLAST of Sed0011139.1 vs. ExPASy TrEMBL
Match: A0A0A0KL20 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G510990 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.4e-123
Identity = 217/243 (89.30%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPID-SRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHI 60
           MSLRFKEV DSESET IPRP D  ++QT DLGNGSEILY SKF  SD+AWTWFDFLNQ I
Sbjct: 1   MSLRFKEVTDSESETKIPRPFDLGKRQTLDLGNGSEILYISKFVSSDQAWTWFDFLNQRI 60

Query: 61  PWTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEAL 120
           PWTRPTI VFGRSV+QPRDTCYVA+PGL TLTYSGYKPHAYTWDDF PLKDIL+AVHEAL
Sbjct: 61  PWTRPTICVFGRSVLQPRDTCYVANPGLTTLTYSGYKPHAYTWDDFTPLKDILDAVHEAL 120

Query: 121 PGSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQRR 180
           PGS FNSLLLNRYKGGNDYVGWHSDDEK+Y LNQEIASVSFGCERDFLLKKK NKTSQRR
Sbjct: 121 PGSRFNSLLLNRYKGGNDYVGWHSDDEKVYALNQEIASVSFGCERDFLLKKKPNKTSQRR 180

Query: 181 NDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240
           NDEEPP+KKSKKSSVAD HSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH
Sbjct: 181 NDEEPPAKKSKKSSVADRHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFRH 240

Query: 241 VVV 243
           V+V
Sbjct: 241 VIV 243

[Close]

BLAST of Sed0011139.1 vs. TAIR 10
Match: AT2G22260.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.4e-87
Identity = 154/243 (63.37%), Postives = 188/243 (77.37%), Query Frame = 0


Query: 1   MSLRFKEVADSESETTIPRPIDSRKQTFDLGNGSEILYFSKFAPSDRAWTWFDFLNQHIP 60
           MSL      +S S +  P    SRK T DLG+GS+++Y  +F P  ++WT+FD+L++HIP
Sbjct: 77  MSLTSIVAVESPSSSNAP----SRK-TIDLGHGSDLIYIQRFLPFQQSWTFFDYLDKHIP 136

Query: 61  WTRPTIRVFGRSVVQPRDTCYVASPGLATLTYSGYKPHAYTWDDFPPLKDILNAVHEALP 120
           WTRPTIRVFGRS +QPRDTCYVAS GL  L YSGY+P +Y+WDDFPPLK+IL+A+++ LP
Sbjct: 137 WTRPTIRVFGRSCLQPRDTCYVASSGLTALVYSGYRPTSYSWDDFPPLKEILDAIYKVLP 196

Query: 121 GSSFNSLLLNRYKGGNDYVGWHSDDEKLYGLNQEIASVSFGCERDFLLKKKSNKTSQ--R 180
           GS FNSLLLNRYKG +DYV WH+DDEK+YG   EIASVSFGCERDF+LKKK ++ S   +
Sbjct: 197 GSRFNSLLLNRYKGASDYVAWHADDEKIYGPTPEIASVSFGCERDFVLKKKKDEESSQGK 256

Query: 181 RNDEEPPSKKSKKSSVADTHSFVLKHGSLLVMKGYTQRDWMHSVPKRLKAEATRINLTFR 240
             D  P  K+ K+SS  D  S  LKHGSLLVM+GYTQRDW+HSVPKR KAE TRINLTFR
Sbjct: 257 TGDSGPAKKRLKRSSREDQQSLTLKHGSLLVMRGYTQRDWIHSVPKRAKAEGTRINLTFR 314

Query: 241 HVV 242
            V+
Sbjct: 317 LVL 314

The following BLAST results are available for this feature:

BLAST of Sed0011139.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603836.1	4.2e-127	92.12	DNA oxidative demethylase ALKBH2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022950477.1	4.2e-127	92.12	DNA oxidative demethylase ALKBH2 isoform X2 [Cucurbita moschata] >KAG7034017.1 D...	[more]
XP_022950476.1	1.0e-125	92.05	DNA oxidative demethylase ALKBH2 isoform X1 [Cucurbita moschata]	[more]
XP_038882915.1	5.1e-125	89.71	DNA oxidative demethylase ALKBH2 [Benincasa hispida] >XP_038882916.1 DNA oxidati...	[more]
XP_022977708.1	5.1e-125	91.63	DNA oxidative demethylase ALKBH2 [Cucurbita maxima]	[more]

BLAST of Sed0011139.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIE0	4.8e-86	63.37	DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 ...	[more]
Q96Q83	4.9e-22	33.61	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens OX=9606...	[more]
Q32L00	4.2e-21	33.61	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus OX=9913 G...	[more]
Q58DM4	9.3e-21	36.93	DNA oxidative demethylase ALKBH2 OS=Bos taurus OX=9913 GN=ALKBH2 PE=2 SV=1	[more]
Q5XIC8	7.9e-20	33.33	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Rattus norvegicus OX...	[more]

BLAST of Sed0011139.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEX9	2.0e-127	92.12	DNA oxidative demethylase ALKBH2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GEX8	5.0e-126	92.05	DNA oxidative demethylase ALKBH2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IQU8	2.5e-125	91.63	DNA oxidative demethylase ALKBH2 OS=Cucurbita maxima OX=3661 GN=LOC111477932 PE=...	[more]
A0A6J1BTV9	1.6e-124	89.30	DNA oxidative demethylase ALKBH2 OS=Momordica charantia OX=3673 GN=LOC111005717 ...	[more]
A0A0A0KL20	1.4e-123	89.30	Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]

BLAST of Sed0011139.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22260.1	3.4e-87	63.37	oxidoreductase, 2OG-Fe(II) oxygenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	PFAM	PF13532	2OG-FeII_Oxy_2	coord: 37..238 e-value: 6.6E-32 score: 111.3
IPR037151	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	GENE3D	2.60.120.590		coord: 22..241 e-value: 3.6E-60 score: 205.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..194
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 33..240
IPR032852	DNA oxidative demethylase ALKBH2	PANTHER	PTHR31573	ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2	coord: 14..241
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROSITE	PS51471	FE2OG_OXY	coord: 123..241 score: 13.008838

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0011139	Sed0011139	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011139.1-cds	Sed0011139.1-cds-LG10:3552578..3552774	CDS
Sed0011139.1-cds	Sed0011139.1-cds-LG10:3553162..3553351	CDS
Sed0011139.1-cds	Sed0011139.1-cds-LG10:3553453..3553569	CDS
Sed0011139.1-cds	Sed0011139.1-cds-LG10:3554379..3554603	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0011139.1-exon	Sed0011139.1-exon-LG10:3552578..3552774	exon
Sed0011139.1-exon	Sed0011139.1-exon-LG10:3553162..3553351	exon
Sed0011139.1-exon	Sed0011139.1-exon-LG10:3553453..3553569	exon
Sed0011139.1-exon	Sed0011139.1-exon-LG10:3554379..3554603	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0011139.1	Sed0011139.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0006307	DNA dealkylation involved in DNA repair
biological_process	GO:0032259	methylation
biological_process	GO:0035511	oxidative DNA demethylation
molecular_function	GO:0051747	cytosine C-5 DNA demethylase activity
molecular_function	GO:0043734	DNA-N1-methyladenine dioxygenase activity
molecular_function	GO:0008198	ferrous iron binding
molecular_function	GO:0008168	methyltransferase activity