Sed0011029.4 (mRNA) Chayote v1

Overview
NameSed0011029.4
TypemRNA
OrganismSechium edule (Chayote v1)
Descriptionpathogenesis-related homeodomain protein
LocationLG12: 32352782 .. 32359795 (-)
Sequence length2757
RNA-Seq ExpressionSed0011029.4
SyntenySed0011029.4
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGCTAGAAGTTCCCGCAATTCAGTCTCCATTCGCATTCAGCAACTTGTCGAAAAATCGTTTTATTCAGTTCTTCACAATCATTTTTATTCCCATAAATATGTGAATCAAATCATTCCCAAAAGTTATTGGAAACATTAAACTACGAATCTTTTCAACACCGATTCTACAGCCGAGCATTGATTGATACTCAACAGAAATCTGCTTCAGTTTGATTCTCTACAAAAATCTGGAGTATTACAATTGTTTATGGTAAGTGTTTATGGTTTCGGTTGGTATTGATTCGATTTCGGACAGATTTTCCGAGTTTCATAAATCACAAAGCGGCGACCGTTGATTTCTTTAGGAAATTAGAAATTGAGGCGGCTACTGATGAATGTACTCGAAATCTGCCGTTTCACGGTTGAAATTTCAATCCAGATCATTGATTCAGTGTGAGAAATCGCCATTACCTCTTTTGATTTCACTTTCATTGATTCAGTATCAAGATCCGCTTCGTTTTTGCGAATCTCCTCGAGGTAGCCTTATTTTCGTTAATTTCCTTTCCCATTGTTTCATTCATGTTCGATAATGTGATTTTCGATTTCTGGTTATATTTTCGGGGGGTGTATTTATAGATTTATGTCTTTGAAGATTCGTTGTTTGTATGGATTGATTGGGGGTTTTTGGCCAAATTGGCGTCTGGGTATCGGTTGAATTGGTTTATTATGGATCACAAGTGATTTGATGTATTTGAATTAGGTAGTTTTCATGAATGATGATCATTGATGGTAGGTTCTTTAAACGAGTAGTTATACTTTCTTAAGAATTAAAATTCTATTGCTGAGATCAATGGATCTCGCTGCCTTGGCTCATGTTGGTTGATGATATGGAATCTAGGATGAAAGTGCAGAGGAAGTTTGATTCATCTTTTGTGAAATTGTTACCTTATCTCATTACTTGGAGATTTATGTTGCATAGATTAAATAGTATGTCTACATTTGTAGTGGATTTCGTTCAAATAAGCTTTGATGTCTATTTAGTTAGCTTATTGAGGATAGCCGGTGGCTTGATCTTCAGATTGCTCAGGGAACTTTTTTTTTTGGTATTATAAGTGTGTGTCTGATGTATCACGAGACAAATTGTCTGACCCTACAACATTTGGATGTCAAAGAATTTTAGTGTTATAAGGATTGGTTTGGGCATTGACCGAACAAGTGGACATCTGCTGTGGGATTTGTCTTGTAACAAAAGAAGCGGTTTTATTGATTTTTTAAAGTACACATATAACTCTAGGTGTGTGTGGGGGGCTTCACATTCTCTAACTCTTTATATTTATGCTGTAAAGATTGACCTGTTCAATAGTTCCATGTGTAGGTACACTTGAAGACGGTTATCGGTTTTTATTCTGCAAATCATCTATGAGAATACATTGGAGATCAATATGAGAGGTACTGGAAGGAGATTGACCCAGAAGGAATCTGGAAAATGTTCCCACTCCAAGGTGGAAACAGGGTCAGAGTTGGTTTTACCTCTGAAGTTGAAAAGGTGCAGCAAAATATCCAATTCCAAACAGAGAAAGCCAAGAGCGAAATCACATGTACAGGCAATTGGTTCAACATTCAAGAGGAGGCCTCTTCCTAAATCATTGAGCAAGGGGAATAAGAATGTGACAATTAGACACCTGGCTGGCCAAAAAAATCTGCGTAAAAAACTCGATCCAAAATCTTCCAAGGAATTAATTTTGTCAAAGCTTCAAGGTAGAAAATCCCTGCCATCGACTAGCACGAAAGTGAATGCTGAAAAAGTTGAGCCGGGGGCCAAGATGAAACAACAAAGGAGAAGGAGAAAGAAAAAAGGAAAAAAGGAAAAAGTTGAGTTAGATGAAGCTTCTCGTCTACAGAGGAGAACAAGATACCTTATAATTAAAATGAAGCTAGAGCAGAACCTTATCGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGGTAAAAATTATTATTTCATTATCTGACAGTATTAACTAAGTTGTCTATTTATTTTGATACGGTCATTTAGTTAGCCTTAGTTGGTTAGGTGGTTAGGGTAGTTAGTAACTTAGTAACTTAGTCCCTTTGAGGGCTATATAAGTGTAACCTACCCCATTATGAAATACAACTTACAACTTCTGTATTGAGTTAACTCGTGATTGAAGGGGGCGTTGCGATAGTGTTGGACTCTATCATATTTTCTAGTCTTTAAAATGATAGATTTTTGTTTCTTCGCCTTTTTGAACGATGTGGGGGAGGAGGAATAATGGTAGTTTGATCAGAGAACCCTTTTTTTTCTTTTTTCTTTTTCTGCTCCTCGGTTAGAATGCTCTTAAATTATGATTCAGTGTTTAATCAATGAGAGAGGATCTATCTGATGGAGAAAAAAACGAGGATATTATCCCCTTTTCTTTTTCCTTAAATAATTCCATGAATAAAATCTTTTACAAATTCAGATGGTACAGTTCTTATAGAAGCTGAATCCTTTATATTGAAAGTAGAAAATGGTCTGACCTTTTGTTGCTATGTGAATTTTTTCCCCTGACATAACTATTTCCCTTAGTCGAGAAAAAATCAAGCCAGAAAAGGAACTCCAGAGAGCCGTGAAGCAGATATTAAATTGCAAACTTGGAATCCGTGATGCTATTCGCGAGCTGGACATGCTTGGTTCAGTAGGATCCATTGAAGGCAATGTTATTGGTCCTGATGGATCTGTCTACCACGAACATGTAAATAGTGCAGCTTAAAGTTTTCGTTCTAGTTAATTACATCGGACAAATAATTCTTTTGGTACTTTTTTAATCAAATTAATTAGAGAACTATATTGATTTGAATCATATTGGGTAAAGAGTTGTACATCATTGTGGTTTGTTGGGGGTGGAGGGCAGTTCCTGCTAAACTTTGATTGCTTCATTCATTAAAAAAAGGAGATAGGAAAATTCATAGTACGAGATATAGTCATTGGTGTGCATAGATGAGAGTCTGGAAGTAAAGTAACTCTGATATTTCGTATTGCTCATTTTAACTTCTTAAATGACTTTTAGATTTGGGATATTGGTGGATGTGTTTTATCTGGTATTTTCTGCCTTCTAACTGGGCAAAATGTGAATCGTGGGGGAAAGTTTGAACCATGGTCGGCTCAAAAGACCAATTACTATGGTAGCTATTGTCTTACAATGAATCGATTATGCATAGCCAGTAAATCTTAACATGCATTTAGCTTGTATCTAAAGTTCTATTAGATTGAAGTCTATTTTCTTTTCTTCAGATATTCTGTGCGAAATGCAAGTTGCGTGAAGCTTTTCCGGACAATGATATTATACTTTGCGATGGGACATGCAACAGTGCTTTTCACCAAAAATGTATGGACCCACCATTAGACACAAAAAATAGTAAGTTTAGCCTGTATTATACTCTTGAATTTTCTCACTGGACTTTGATCTGGTTGCTTAAGACATTGACTCCTTAAATTATTTTTAGTTCCTCCAGGTGATCAGGGTTGGTTTTGCAAATTTTGTGAGTGCAAGATGAAAATATTAGAAGGAATGAATGCACATCTCGGCACAAGCTTCTCAACGAACATTAGTTGGGAGGTTAGTTTCTGAAGATCTTCTTTCTCAGTTTTCCATCTTTGTTTTAATTCTAAAATTTATTGCTTCACATAATATCCAATATTCATACCACAATCGGTTGTAATCTAAAATCTAACCCTTCTTGGAATAGGATGTTTTCAAAGAAGAAGCTGCTTTCCCAGATGGTGGAAATGCATTGCTGAATCATGAGGAAGATTGGCCCTCAGATGATTCTGCAGATGATGACTATGATCCAGATAAGAAGGAGAACCTTAGAGGGGATGAAAATGATAAGGATGTTTTGGAGGAGTCGAGTAGTTCAACTAGCTTGAGTTGGTCTTTAGATGGTGAGGATTTAACTGATACAGATGGCATTAGATGTGAAGATCACTTTGGTGCTGGTAGTAGCTTAGTTTCTGATGGTTCCAATGAAGGGGAACTCACATGTGGTCGTCGGAAGCGGCAGGCTGTTGATTATAAAAACTTATATGTTGTAAGTTTCTCATCACTCTTAGACAAGTGTTAGTGCTTTATAGCTTCCAAGCCTAGAAAGTAATATTCTCTGAGCCCGTAGCAAGCAACATTGAGCATTTTGTTCGGAGTGTACCTGTCAACCTTTTATAAAAGCATAAGAAAAAATAGATTGCATTAAGTTTGAGCCTAGTTGTAATCGAATTTTTTTAATAATTATATGAACACTCATTACTTCAAATCATAGGTCATGTGCTGGTAAATTTCCACCAGTCTATAATACAATTTTTTGCCGGTTATTTTCAGGTAGGAATTAGAAAAGAGTTCATTGATTCCAATGATTTTTTTAATAACAAGAAAGTTAAAAGAAAAGGAGGTAAGGAATCTGATACGATCTTAGTCATCTACTAGTTAGCCTTTATTAGTTGGTGGTTTGGGTAGTTAGGAGCTTAGTCCCTTTGAAGGCTATATAATTGTAACTTACTCATATTATGAATACAACTTGGAATTGATATTGAATCGATTCAATAGATTGAGGAGGAACCTTATGATAGAGCTAGACTCTTATCGGAATCAAGAATCATCCCTGTCAAGGGTTCTATAAGTGGCAAGGCATTATTTTGATGTGATCAAGGAGTAGTTACAGCTGGGGTTGCCTCCATATTTTTTTAATTTCCTTTTTCTAGTTAAAAGCCTTGTTAACTTTCAAATTCTTCTGTAATATCTCTCTCTTTGTAATCCACTCAAATTTTGGGGTTCCTTTTCTGCACTACGTTCAGGGAAATTGTTAACTTGTTTTGTTTTTTAAACATGAAAACGATTAAATTCAACAGTTGCAACTTTTCTTTAATAGACAATTTGGAAGTTTAAACGTAAATTTGATCTTCTTTTCTCAACGATTTAGGAAAGTTATCAATTTGTTTATGTCAGTATTCACCTCATTGATGAGAAAAGTTCTGTTTTGGTTGGAAAGAAAGGATAATGCCATGTAGGATTCTCCAGAATCAATTCTAAAGATATCTTTAACAAATATTTATTGTTGTGGTTGTAATTCTTTTCTTTCAGGAAATGTTTGGAAAGGATGGTCCAGCACAAGAACTAGGTAGTGAAGATGAAGACTGGGGACCTGCAAAAAGAAGACGGAAAGAAAAGGAATGCGATGCTGCAAGTACTCTTATGTCGCTTTGTGAAAACGAAAAAAAGAGTGAAGACATTGACATGGAAGCAGAGAAAAAACTTCTCAATTCGCAAAGTAGGTCGGTTTTCAGAATTCCTCGTTATGCAGTTGAGGTAAAGATTTAATCATGCTGTATATCAAGCTTTTTGTAAGTCTTTAAGAGTGCTTCTCCCTCCACATTAACTTGTCATCCACTTTGTGAACATACCAGAAACTTCGCCAAGTGTTTGCTGATAATGAACTTCCCTCTAAAGACGTTAAGGAGAACCTCTCAAAAGAATTAGGCCTTGATGCCGAAAAGGTAACAACAATCCTACAAGTTATCAAGTACAGGAAAACCTCCTTTCTTTTTCCTCTCTTTTTGAATTGATGCTTACCATATTCTTTGATGCTCGTGTAAGTCTAATTGAGGCGTGGCTGGGCAAATAAAAATTAGCCAATAGATATAGGGTTACATTTTCGTTCGACGGTTGAATAATTGTATTGTATAGTTGTTTCATGCAAATTGCATCTTCTAGATGTGACTTTATTTCCTTAGAGAATCAGGTTGGTTTTGTTAGATGTTCACATATTAAAGTTTTTCATTGGGTATATGTCTTTGACTTTCAGGTCAGTAAATGGTTCAAGAATGCACGATATTCTGCACTAAGAGCTAGAAAGGTGAGATTTGTGCTGTGTGGTTCTGTCGCTTCCTTAGTTGCTTTCTACGAGTTCCGGCATCTTGTAAATTTTTGTCGTTCGGGATCTTCTCGCAAGATATTAATCTGTTTATGAAGAATGCATAGATCTCTTTAAACTGACCAAAAGTTAGAAAAAAAGAAAAAAAAAAAGAAAGAAAGAAAGATCTTTTCAATTTTTACCAGTTTTTCGCCTGCACAAGATTGAGACTCTGATCATCATATGCTTCTACATAACAGGTAGAGGGAGCAACACAGTCCCTTAGTCCTAATAAGACTTCCAACGAGTTCAGATTATCAGATACAAAGGAAATGTCTACGAATCTTCTTTCATCCGAGGATGTTCCCATAAAAGAACTGCAGCTGAAGTCGAGCAATAGTCGTTACAAGAAAAAGCAGCACAGAAAATCCTCACTGGTATCTTCCAACAACAATAAGGTATCATTTCTCCATAACCCAATATTACTTTTTTTCTAGCTTCGTGTCTAATGCTTCCTAACAAAATAGAATCAAAGGCATAGCATTGATGTGTTGAAAGTGTTTTCAGAAAGAAAATGCATTGAAAACCGTTTAAAATATAAGCTTGATTCTTGTTTGAAAATCTTTTTGGAAAGACATTCTTTCCCCATTGTTTTTTTTTTGTGAATTCCAGGGTCAATTTACATGCACCTCGACTATTCTCTCGAAAGAAATCTATAACATTTGGTCGTCAAGAAACCCGTAGGAAATTATTTCTTCCATATCGAACTTAACTTGAGCATGTTTATTTGTTTTTATCCAGGATGCTTTTGGTTTTGATGATGATATAAGCCTGAAGAGTCTCCTAAAGAATAGAAAAGCAAAGATAAAGAAGAGAGTTAAATTTGTAACTAGTGGTGGAAGTCAACAAGCAGAAATGGAGATGGAGAGGCTCTGTAAAATTAAGGGTAGATTAGAGATAATGAAGCAGAAATTACTTAGATTATCAAATAATAAAGATGATGGGATTTTAAATAAGTCAAACATGTTTGAACAGTCTATTGTATATGTTCCAGTGGCAGTGTTAAAGGAAATGGTTTGAACTTGTGCACTGACTTTGATTTTTTTACCCCCATATTCATAGTTGGGA

mRNA sequence

TAAGCTAGAAGTTCCCGCAATTCAGTCTCCATTCGCATTCAGCAACTTGTCGAAAAATCGTTTTATTCAGTTCTTCACAATCATTTTTATTCCCATAAATATGTGAATCAAATCATTCCCAAAAGTTATTGGAAACATTAAACTACGAATCTTTTCAACACCGATTCTACAGCCGAGCATTGATTGATACTCAACAGAAATCTGCTTCAGTTTGATTCTCTACAAAAATCTGGAGTATTACAATTGTTTATGGTAAGTGTTTATGGTTTCGGTTGGTATTGATTCGATTTCGGACAGATTTTCCGAGTTTCATAAATCACAAAGCGGCGACCGTTGATTTCTTTAGGAAATTAGAAATTGAGGCGGCTACTGATGAATGTACTCGAAATCTGCCGTTTCACGGTTGAAATTTCAATCCAGATCATTGATTCAGTGTGAGAAATCGCCATTACCTCTTTTGATTTCACTTTCATTGATTCAGTATCAAGATCCGCTTCGTTTTTGCGAATCTCCTCGAGTTCCATGTGTAGGTACACTTGAAGACGGTTATCGGTTTTTATTCTGCAAATCATCTATGAGAATACATTGGAGATCAATATGAGAGGTACTGGAAGGAGATTGACCCAGAAGGAATCTGGAAAATGTTCCCACTCCAAGGTGGAAACAGGGTCAGAGTTGGTTTTACCTCTGAAGTTGAAAAGGTGCAGCAAAATATCCAATTCCAAACAGAGAAAGCCAAGAGCGAAATCACATGTACAGGCAATTGGTTCAACATTCAAGAGGAGGCCTCTTCCTAAATCATTGAGCAAGGGGAATAAGAATGTGACAATTAGACACCTGGCTGGCCAAAAAAATCTGCGTAAAAAACTCGATCCAAAATCTTCCAAGGAATTAATTTTGTCAAAGCTTCAAGGTAGAAAATCCCTGCCATCGACTAGCACGAAAGTGAATGCTGAAAAAGTTGAGCCGGGGGCCAAGATGAAACAACAAAGGAGAAGGAGAAAGAAAAAAGGAAAAAAGGAAAAAGTTGAGTTAGATGAAGCTTCTCGTCTACAGAGGAGAACAAGATACCTTATAATTAAAATGAAGCTAGAGCAGAACCTTATCGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAAATCAAGCCAGAAAAGGAACTCCAGAGAGCCGTGAAGCAGATATTAAATTGCAAACTTGGAATCCGTGATGCTATTCGCGAGCTGGACATGCTTGGTTCAGTAGGATCCATTGAAGGCAATGTTATTGGTCCTGATGGATCTGTCTACCACGAACATATATTCTGTGCGAAATGCAAGTTGCGTGAAGCTTTTCCGGACAATGATATTATACTTTGCGATGGGACATGCAACAGTGCTTTTCACCAAAAATGTATGGACCCACCATTAGACACAAAAAATATTCCTCCAGGTGATCAGGGTTGGTTTTGCAAATTTTGTGAGTGCAAGATGAAAATATTAGAAGGAATGAATGCACATCTCGGCACAAGCTTCTCAACGAACATTAGTTGGGAGGATGTTTTCAAAGAAGAAGCTGCTTTCCCAGATGGTGGAAATGCATTGCTGAATCATGAGGAAGATTGGCCCTCAGATGATTCTGCAGATGATGACTATGATCCAGATAAGAAGGAGAACCTTAGAGGGGATGAAAATGATAAGGATGTTTTGGAGGAGTCGAGTAGTTCAACTAGCTTGAGTTGGTCTTTAGATGGTGAGGATTTAACTGATACAGATGGCATTAGATGTGAAGATCACTTTGGTGCTGGTAGTAGCTTAGTTTCTGATGGTTCCAATGAAGGGGAACTCACATGTGGTCGTCGGAAGCGGCAGGCTGTTGATTATAAAAACTTATATGTTGAAATGTTTGGAAAGGATGGTCCAGCACAAGAACTAGGTAGTGAAGATGAAGACTGGGGACCTGCAAAAAGAAGACGGAAAGAAAAGGAATGCGATGCTGCAAGTACTCTTATGTCGCTTTGTGAAAACGAAAAAAAGAGTGAAGACATTGACATGGAAGCAGAGAAAAAACTTCTCAATTCGCAAAGTAGGTCGGTTTTCAGAATTCCTCGTTATGCAGTTGAGAAACTTCGCCAAGTGTTTGCTGATAATGAACTTCCCTCTAAAGACGTTAAGGAGAACCTCTCAAAAGAATTAGGCCTTGATGCCGAAAAGGTCAGTAAATGGTTCAAGAATGCACGATATTCTGCACTAAGAGCTAGAAAGGTAGAGGGAGCAACACAGTCCCTTAGTCCTAATAAGACTTCCAACGAGTTCAGATTATCAGATACAAAGGAAATGTCTACGAATCTTCTTTCATCCGAGGATGTTCCCATAAAAGAACTGCAGCTGAAGTCGAGCAATAGTCGTTACAAGAAAAAGCAGCACAGAAAATCCTCACTGGATGCTTTTGGTTTTGATGATGATATAAGCCTGAAGAGTCTCCTAAAGAATAGAAAAGCAAAGATAAAGAAGAGAGTTAAATTTGTAACTAGTGGTGGAAGTCAACAAGCAGAAATGGAGATGGAGAGGCTCTGTAAAATTAAGGGTAGATTAGAGATAATGAAGCAGAAATTACTTAGATTATCAAATAATAAAGATGATGGGATTTTAAATAAGTCAAACATGTTTGAACAGTCTATTGTATATGTTCCAGTGGCAGTGTTAAAGGAAATGGTTTGAACTTGTGCACTGACTTTGATTTTTTTACCCCCATATTCATAGTTGGGA

Coding sequence (CDS)

ATGAGAGGTACTGGAAGGAGATTGACCCAGAAGGAATCTGGAAAATGTTCCCACTCCAAGGTGGAAACAGGGTCAGAGTTGGTTTTACCTCTGAAGTTGAAAAGGTGCAGCAAAATATCCAATTCCAAACAGAGAAAGCCAAGAGCGAAATCACATGTACAGGCAATTGGTTCAACATTCAAGAGGAGGCCTCTTCCTAAATCATTGAGCAAGGGGAATAAGAATGTGACAATTAGACACCTGGCTGGCCAAAAAAATCTGCGTAAAAAACTCGATCCAAAATCTTCCAAGGAATTAATTTTGTCAAAGCTTCAAGGTAGAAAATCCCTGCCATCGACTAGCACGAAAGTGAATGCTGAAAAAGTTGAGCCGGGGGCCAAGATGAAACAACAAAGGAGAAGGAGAAAGAAAAAAGGAAAAAAGGAAAAAGTTGAGTTAGATGAAGCTTCTCGTCTACAGAGGAGAACAAGATACCTTATAATTAAAATGAAGCTAGAGCAGAACCTTATCGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAAATCAAGCCAGAAAAGGAACTCCAGAGAGCCGTGAAGCAGATATTAAATTGCAAACTTGGAATCCGTGATGCTATTCGCGAGCTGGACATGCTTGGTTCAGTAGGATCCATTGAAGGCAATGTTATTGGTCCTGATGGATCTGTCTACCACGAACATATATTCTGTGCGAAATGCAAGTTGCGTGAAGCTTTTCCGGACAATGATATTATACTTTGCGATGGGACATGCAACAGTGCTTTTCACCAAAAATGTATGGACCCACCATTAGACACAAAAAATATTCCTCCAGGTGATCAGGGTTGGTTTTGCAAATTTTGTGAGTGCAAGATGAAAATATTAGAAGGAATGAATGCACATCTCGGCACAAGCTTCTCAACGAACATTAGTTGGGAGGATGTTTTCAAAGAAGAAGCTGCTTTCCCAGATGGTGGAAATGCATTGCTGAATCATGAGGAAGATTGGCCCTCAGATGATTCTGCAGATGATGACTATGATCCAGATAAGAAGGAGAACCTTAGAGGGGATGAAAATGATAAGGATGTTTTGGAGGAGTCGAGTAGTTCAACTAGCTTGAGTTGGTCTTTAGATGGTGAGGATTTAACTGATACAGATGGCATTAGATGTGAAGATCACTTTGGTGCTGGTAGTAGCTTAGTTTCTGATGGTTCCAATGAAGGGGAACTCACATGTGGTCGTCGGAAGCGGCAGGCTGTTGATTATAAAAACTTATATGTTGAAATGTTTGGAAAGGATGGTCCAGCACAAGAACTAGGTAGTGAAGATGAAGACTGGGGACCTGCAAAAAGAAGACGGAAAGAAAAGGAATGCGATGCTGCAAGTACTCTTATGTCGCTTTGTGAAAACGAAAAAAAGAGTGAAGACATTGACATGGAAGCAGAGAAAAAACTTCTCAATTCGCAAAGTAGGTCGGTTTTCAGAATTCCTCGTTATGCAGTTGAGAAACTTCGCCAAGTGTTTGCTGATAATGAACTTCCCTCTAAAGACGTTAAGGAGAACCTCTCAAAAGAATTAGGCCTTGATGCCGAAAAGGTCAGTAAATGGTTCAAGAATGCACGATATTCTGCACTAAGAGCTAGAAAGGTAGAGGGAGCAACACAGTCCCTTAGTCCTAATAAGACTTCCAACGAGTTCAGATTATCAGATACAAAGGAAATGTCTACGAATCTTCTTTCATCCGAGGATGTTCCCATAAAAGAACTGCAGCTGAAGTCGAGCAATAGTCGTTACAAGAAAAAGCAGCACAGAAAATCCTCACTGGATGCTTTTGGTTTTGATGATGATATAAGCCTGAAGAGTCTCCTAAAGAATAGAAAAGCAAAGATAAAGAAGAGAGTTAAATTTGTAACTAGTGGTGGAAGTCAACAAGCAGAAATGGAGATGGAGAGGCTCTGTAAAATTAAGGGTAGATTAGAGATAATGAAGCAGAAATTACTTAGATTATCAAATAATAAAGATGATGGGATTTTAAATAAGTCAAACATGTTTGAACAGTCTATTGTATATGTTCCAGTGGCAGTGTTAAAGGAAATGGTTTGA

Protein sequence

MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTFKRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAEKVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEGMNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKENLRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCGRRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKKSEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKVSKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLKSSNSRYKKKQHRKSSLDAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGGSQQAEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV
Homology
[Close]
BLAST of Sed0011029.4 vs. NCBI nr
Match: XP_022974199.1 (pathogenesis-related homeodomain protein [Cucurbita maxima] >XP_022974200.1 pathogenesis-related homeodomain protein [Cucurbita maxima] >XP_022974202.1 pathogenesis-related homeodomain protein [Cucurbita maxima])

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 588/716 (82.12%), Postives = 635/716 (88.69%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           MRGTGRRLTQKESGKCSHSK+ETGSEL+LPLKLKRCSKIS+SKQ+K R KSH Q IGST 
Sbjct: 1   MRGTGRRLTQKESGKCSHSKMETGSELILPLKLKRCSKISHSKQKKSRTKSHAQEIGSTL 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRP PKSLSKGNKNVTIR LAG+K L KKL+ K +K+L+LSKLQG KSLPS ST+ NAE
Sbjct: 61  KRRPFPKSLSKGNKNVTIRQLAGKKFLLKKLNSKYTKDLLLSKLQGGKSLPSPSTEGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+RRK KGK+EKVELDEASRLQRRTRYLIIK+KLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVTKINQQRKRRKNKGKREKVELDEASRLQRRTRYLIIKIKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA++QIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMEQILQCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS N+SWED+FKEEAAFPDG NA LNHEEDWPSDDSADDDYDPDKKE    N
Sbjct: 301 MNAHLGTRFSMNVSWEDIFKEEAAFPDGRNASLNHEEDWPSDDSADDDYDPDKKEIGYDN 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
             G+ENDKDV EESSSSTSLSWSLDGEDLTD D I CEDHFGA SS+VSDGSNE  +T G
Sbjct: 361 PSGEENDKDVFEESSSSTSLSWSLDGEDLTDRDSIGCEDHFGASSSIVSDGSNEEGITGG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LYVEMFGKD  A E  SEDEDWGPAKRRR+EKECDAASTLMSLCE+EKK
Sbjct: 421 RRQRQAVDYKKLYVEMFGKDSTAHEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKK 480

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S+ ID+EAEK+ LNSQSRS FRIP YAVEKLRQVFA+NELPS+DVKENLS ELGLDAEKV
Sbjct: 481 SKKIDVEAEKRPLNSQSRSFFRIPLYAVEKLRQVFAENELPSRDVKENLSIELGLDAEKV 540

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLKS 600
           SKWFKNARYSALR RK EGATQS SPNKT NE RL+D+KEMS    SSED PIKELQLKS
Sbjct: 541 SKWFKNARYSALRTRKAEGATQSHSPNKTLNEPRLADSKEMSACPPSSEDAPIKELQLKS 600

Query: 601 SNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGG--SQQ 660
            NS YKKKQHRKSSL       DA    DDISLK+LLKNRKAK+KKRVKFV  GG   Q+
Sbjct: 601 RNSHYKKKQHRKSSLVSSNNNKDALDSGDDISLKNLLKNRKAKVKKRVKFVARGGDRGQE 660

Query: 661 AEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           AE+EMERLCKIKGRLEIMKQKLLRLSN K+DG+L++S+MFEQSIVYVPVAVLKE V
Sbjct: 661 AEVEMERLCKIKGRLEIMKQKLLRLSNKKEDGVLDRSHMFEQSIVYVPVAVLKEKV 716

[Close]
BLAST of Sed0011029.4 vs. NCBI nr
Match: XP_023531700.1 (pathogenesis-related homeodomain protein [Cucurbita pepo subsp. pepo] >XP_023531701.1 pathogenesis-related homeodomain protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1117.8 bits (2890), Expect = 0.0e+00
Identity = 586/718 (81.62%), Postives = 636/718 (88.58%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           M+GTGRRLTQKESGKCSHSK+ETGSEL+LPLKLKRCSKIS+SKQ+K R KSH Q IGST 
Sbjct: 1   MKGTGRRLTQKESGKCSHSKMETGSELILPLKLKRCSKISHSKQKKSRTKSHAQEIGSTL 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           K+RP PKSLSKGNKNVTIR +AG+K L KKL+ K +K+L+LSKLQG KSLPS+ST+ NAE
Sbjct: 61  KKRPFPKSLSKGNKNVTIRQMAGKKFLLKKLNSKYTKDLLLSKLQGGKSLPSSSTEGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+R K KGK+EK+ELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVTKINQQRKRSKNKGKREKLELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA+KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMKQILQCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS N+SWED+FKEEAAFPDG NA LNHEEDWPSDDSADDDYDPDKKE    N
Sbjct: 301 MNAHLGTRFSMNVSWEDIFKEEAAFPDGRNASLNHEEDWPSDDSADDDYDPDKKEIGYDN 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
           L G+ENDKDV EESSSSTSLSWSLDGEDLTD DGI CEDHFGA SS+VSDGSNE  +T G
Sbjct: 361 LSGEENDKDVFEESSSSTSLSWSLDGEDLTDRDGIGCEDHFGASSSIVSDGSNEEGITGG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LYVEMFGKD  A E  SEDEDWGPAKRRR+EKECDAASTLMSLCE+EKK
Sbjct: 421 RRQRQAVDYKKLYVEMFGKDSTAHEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKK 480

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S  ID+EAEK+ LNSQSRS FRIP YAVEKLRQVFA+NELPS++VKENLS ELGLDAEKV
Sbjct: 481 SPKIDVEAEKRPLNSQSRSFFRIPLYAVEKLRQVFAENELPSREVKENLSIELGLDAEKV 540

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLKS 600
           SKWFKNARYSALR RK EGATQS SPNKT NE RL+D+KEMS    SSED PIKELQLKS
Sbjct: 541 SKWFKNARYSALRTRKAEGATQSHSPNKTLNEPRLADSKEMSACPPSSEDAPIKELQLKS 600

Query: 601 SNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGG----S 660
            NSRYKKKQHRKSSL       DA    DDISLK+LLKNRK K+KKRVKFV  GG     
Sbjct: 601 RNSRYKKKQHRKSSLVSSNNNKDALDLGDDISLKNLLKNRKTKVKKRVKFVARGGGGGRG 660

Query: 661 QQAEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           Q+AE+EMERLCKIKGRL+IMKQKLLRLSN K+DGIL++S+MFEQSIVYVPVAVLKE V
Sbjct: 661 QEAEVEMERLCKIKGRLQIMKQKLLRLSNKKEDGILDRSHMFEQSIVYVPVAVLKEKV 718

[Close]
BLAST of Sed0011029.4 vs. NCBI nr
Match: XP_022933726.1 (pathogenesis-related homeodomain protein [Cucurbita moschata] >XP_022933727.1 pathogenesis-related homeodomain protein [Cucurbita moschata])

HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 585/721 (81.14%), Postives = 635/721 (88.07%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           M+GTGRRLTQKESGKCSHSK+ETGSEL+LPLKLKRCSKIS+SKQ+K R KSH Q IGST 
Sbjct: 1   MKGTGRRLTQKESGKCSHSKMETGSELILPLKLKRCSKISHSKQKKSRTKSHAQEIGSTL 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRP PKSLSKGNKNVTIR LAG+K L KKL+ K +K+L+LSKLQG KSLPS+ST+ NAE
Sbjct: 61  KRRPFPKSLSKGNKNVTIRQLAGKKFLLKKLNSKYTKDLLLSKLQGGKSLPSSSTEGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+RRK KGK+EKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVTKINQQRKRRKNKGKREKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA+KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMKQILQCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS N+SWED+FKEEAAFPDG NA LNHEEDWPSDDSADDDYDPDK E    N
Sbjct: 301 MNAHLGTRFSMNVSWEDIFKEEAAFPDGRNASLNHEEDWPSDDSADDDYDPDKNEIGYDN 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
           L G+ENDKDV EESSSSTSLSWSLDGEDLTD DGI CEDHFGA SS+VSDGSNE  +T G
Sbjct: 361 LSGEENDKDVFEESSSSTSLSWSLDGEDLTDRDGIGCEDHFGASSSIVSDGSNEEGITGG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LYVEMFGKD  A E  SEDEDWGPAKRRR+EKECDAASTLMSLCE+EKK
Sbjct: 421 RRQRQAVDYKKLYVEMFGKDSTAHEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKK 480

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S  ID+EAEK+ LNSQSRS FRIP YAVEKLRQVFA+NELPS++VKENLS ELGLDAEKV
Sbjct: 481 SPKIDVEAEKRPLNSQSRSFFRIPLYAVEKLRQVFAENELPSREVKENLSIELGLDAEKV 540

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRL-SDTKEMSTNLLSSEDVPIKELQLK 600
           SKWFKNARYSALR RK EGATQS SPNKT N+ RL +D+KEMS    SSED PIKELQLK
Sbjct: 541 SKWFKNARYSALRTRKAEGATQSHSPNKTLNDPRLAADSKEMSACPPSSEDAPIKELQLK 600

Query: 601 SSNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGG---- 660
           S N+ YKKKQHRKSSL       DA    DDISLK+LLKNRK K+KKRVKFV  GG    
Sbjct: 601 SRNTHYKKKQHRKSSLVSSNNNKDALDSGDDISLKNLLKNRKTKVKKRVKFVARGGGRGR 660

Query: 661 --SQQAEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEM 704
              Q+AE+EMERLCKIKGRLEIMKQKLLRLSN K+DG+L++S+MFEQSI+YVPVAVLKE 
Sbjct: 661 GRGQEAEVEMERLCKIKGRLEIMKQKLLRLSNEKEDGVLDRSHMFEQSIIYVPVAVLKEK 720

[Close]
BLAST of Sed0011029.4 vs. NCBI nr
Match: XP_038878480.1 (LOW QUALITY PROTEIN: pathogenesis-related homeodomain protein [Benincasa hispida])

HSP 1 Score: 1110.1 bits (2870), Expect = 0.0e+00
Identity = 587/716 (81.98%), Postives = 626/716 (87.43%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           MRG GRRL +KESGKCSHSK+ETGSE + PLKLKRCSKIS+SKQ+K R KSH Q I STF
Sbjct: 1   MRGAGRRLIEKESGKCSHSKLETGSEFIFPLKLKRCSKISHSKQKKSRTKSHSQPISSTF 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRPLPKSLSKGNKNVTIR LA +K   KKLD KSSKEL+LSKLQG KSL S +TK NAE
Sbjct: 61  KRRPLPKSLSKGNKNVTIRQLAVKKFQLKKLDTKSSKELLLSKLQGGKSLSSANTKGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+RRK KGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVVKINQQRKRRKNKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA+KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMKQILKCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDTKNIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTKNIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS NISWEDVFKEEAAFPDGGNALLNHE DWPSDDS DDDYDPDKKE    N
Sbjct: 301 MNAHLGTRFSLNISWEDVFKEEAAFPDGGNALLNHEXDWPSDDSEDDDYDPDKKENSYDN 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
             G+ENDKDVLEESSSSTSLSWSLDGEDLT  DGI CEDH GAGSSLVSDGSNE  + CG
Sbjct: 361 ASGEENDKDVLEESSSSTSLSWSLDGEDLTAKDGIGCEDHLGAGSSLVSDGSNEESIACG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGP--AQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENE 480
           RR+RQAVDYK LYVEMFGKD P   QE  SEDEDWGPAKRRR+EKECDAASTLMSL E+E
Sbjct: 421 RRQRQAVDYKKLYVEMFGKDAPPHEQEEVSEDEDWGPAKRRRREKECDAASTLMSLSESE 480

Query: 481 KKSEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAE 540
           KKS+DIDM AEKKL NS SRS FRIPRYAVEKLRQVFA+NELPS+DVKENLSKELGLDAE
Sbjct: 481 KKSQDIDMAAEKKLPNSHSRSCFRIPRYAVEKLRQVFAENELPSRDVKENLSKELGLDAE 540

Query: 541 KVSKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQL 600
           KVSKWFKNARYSALR RK EGATQ  S +KTSNE RL+D+KEMS NLLS ED P+KELQ 
Sbjct: 541 KVSKWFKNARYSALRNRKAEGATQPHSSHKTSNESRLADSKEMSENLLSFEDAPVKELQQ 600

Query: 601 KSSNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGGSQQ 660
           K   S +KK QHRKSSL       DAF F DDISLK+LLKNRK K+ KRV FV  GG Q+
Sbjct: 601 KLRGSHWKKNQHRKSSLVSSNYNKDAFDFGDDISLKNLLKNRKTKV-KRVNFVARGGGQE 660

Query: 661 AEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           AE+EMERLCKI GRLE MKQ+LLRLSN KDDGIL++S+MFEQ+IVYVPVAVLKE V
Sbjct: 661 AEVEMERLCKINGRLEAMKQQLLRLSNKKDDGILDRSHMFEQTIVYVPVAVLKEKV 715

[Close]
BLAST of Sed0011029.4 vs. NCBI nr
Match: KAG7021700.1 (Pathogenesis-related homeodomain protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1107.8 bits (2864), Expect = 0.0e+00
Identity = 586/729 (80.38%), Postives = 635/729 (87.11%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           M+GTGRRLTQKESGKCSHSK+ETGSEL+LPLKLKRCSKIS+SKQ+K R KSH Q IGST 
Sbjct: 66  MKGTGRRLTQKESGKCSHSKMETGSELILPLKLKRCSKISHSKQKKSRTKSHAQEIGSTL 125

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRP PKS SKGNKNVTIR LAG+K L KKL+ K +K+L+LSKLQG KSLPS+ST+ NAE
Sbjct: 126 KRRPFPKSSSKGNKNVTIRQLAGKKFLLKKLNSKYTKDLLLSKLQGGKSLPSSSTEGNAE 185

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+RRK KGK+EKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 186 KVEPVTKINQQRKRRKNKGKREKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 245

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA+KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 246 QSREKIRPEKELQRAMKQILQCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 305

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 306 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 365

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS N+SWED+FKEEAAFPDG NA LNHEEDWPSDDSADDDYDPDKKE    N
Sbjct: 366 MNAHLGTRFSMNVSWEDIFKEEAAFPDGRNASLNHEEDWPSDDSADDDYDPDKKEIGYDN 425

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
           L G+ENDKDV EESSSSTSLSWSLDGEDLTD DGI CEDHFGA SS+VSDGSNE  +T G
Sbjct: 426 LSGEENDKDVFEESSSSTSLSWSLDGEDLTDRDGIGCEDHFGASSSIVSDGSNEEGITGG 485

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LYVEMFGKD  A E  SEDEDWGPAKRRR+EKECDAASTLMSLCE+EKK
Sbjct: 486 RRQRQAVDYKKLYVEMFGKDSTAHEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKK 545

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S  ID+EAEK+ LNSQSRS FRIP YAVEKLRQVFA+NELPS++VKENLS ELGLDAEKV
Sbjct: 546 SPKIDVEAEKRPLNSQSRSFFRIPLYAVEKLRQVFAENELPSREVKENLSIELGLDAEKV 605

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRL-SDTKEMSTNLLSSEDVPIKELQLK 600
           SKWFKNARYSALR RK EGATQS SPNKT NE RL +D+KEMS    SSED PIKELQLK
Sbjct: 606 SKWFKNARYSALRTRKAEGATQSHSPNKTLNEPRLAADSKEMSACPPSSEDAPIKELQLK 665

Query: 601 SSNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVT------- 660
           S N+ YKKKQHRKSSL       DA    DDISLK+LLKNRK K+KKRVKFV        
Sbjct: 666 SRNTHYKKKQHRKSSLVSSNNNKDALDSGDDISLKNLLKNRKTKVKKRVKFVARGGGGGG 725

Query: 661 -------SGGSQQAEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYV 704
                   GG ++AE+EMERLCKIKGRLEIMKQKLLRLSN K+DG+L++S+MFEQSIVYV
Sbjct: 726 GGGGGGGRGGGREAEVEMERLCKIKGRLEIMKQKLLRLSNKKEDGVLDRSHMFEQSIVYV 785

[Close]
BLAST of Sed0011029.4 vs. ExPASy Swiss-Prot
Match: P48785 (Pathogenesis-related homeodomain protein OS=Arabidopsis thaliana OX=3702 GN=PRH PE=2 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 9.0e-141
Identity = 280/529 (52.93%), Postives = 363/529 (68.62%), Query Frame = 0 

Query: 44  QRKPRAKSHVQAIGSTFKRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSK 103
           Q   +A   V+ IGST     L  S  K  K V+ +          K + + ++E + SK
Sbjct: 12  QETDKACVSVERIGST-----LLSSFVKKGKEVSNKR-------NSKQNKRKAEEELCSK 71

Query: 104 LQGRKSLPSTSTKVNAEKVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKM 163
            + +K    +   V  E++E     K ++R+ K++ K  KVE+D++ RLQRRTRYL+IKM
Sbjct: 72  SRTKK---YSRGWVRCEEMEEEKVKKTRKRKSKRQQKDNKVEVDDSLRLQRRTRYLLIKM 131

Query: 164 KLEQNLIDAYSGEGWKGQSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIE 223
           K++QNLIDAY+ EGWKGQSREKI+P+KEL+RA K+ILNCKLG+RDAIR+LD+L SVGS+E
Sbjct: 132 KMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNCKLGLRDAIRQLDLLSSVGSME 191

Query: 224 GNVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGD 283
             VI  DGS++H+HIFCA+C  REAFPDNDIILCDGTCN AFHQKC+DPPL+T++IPPGD
Sbjct: 192 EKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCNRAFHQKCLDPPLETESIPPGD 251

Query: 284 QGWFCKFCECKMKILEGMNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDD 343
           QGWFCKFC+CK++I++ MNA +GT F  + +W+D+F EEA+ P G  A +N+E DWPSDD
Sbjct: 252 QGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEEASLPIGSEATVNNEADWPSDD 311

Query: 344 SADDDYDPDKKENLRGDENDKDVL-------EESSSSTSLSWSLDGEDLTDTDGIRCEDH 403
           S DDDYDP+ +EN  G  N  +V        +E S STSLS S DG  L+       E H
Sbjct: 312 SKDDDYDPEMREN--GGGNSSNVSGDGGGDNDEESISTSLSLSSDGVALSTGS---WEGH 371

Query: 404 FGAGSSLVSDGSNEGELTCGRRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRR 463
             +      + SNE E  CG R+R+ VDY  LY EMFGKD   QE GSEDEDWGP  RR+
Sbjct: 372 RLSNMVEQCETSNE-ETVCGPRQRRTVDYTQLYYEMFGKDAVLQEQGSEDEDWGPNDRRK 431

Query: 464 KEKECDAASTLMSLCENEKKSEDIDMEAEKKLLNSQS-------RSVFRIPRYAVEKLRQ 523
           +++E DA STL+++CE+ KK +D+    E+   +S S       R +FR+PR AVEKLRQ
Sbjct: 432 RKRESDAGSTLVTMCESSKKDQDVVETLEQSERDSVSVENKGGRRRMFRLPRNAVEKLRQ 491

Query: 524 VFADNELPSKDVKENLSKELGLDAEKVSKWFKNARYSALRARKVEGATQ 559
           VFA+ ELPSK V++ L+KEL LD EKV+KWFKN RY ALR RK E   Q
Sbjct: 492 VFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRYMALRNRKTESVKQ 519

[Close]
BLAST of Sed0011029.4 vs. ExPASy Swiss-Prot
Match: Q04996 (Homeobox protein HAT3.1 OS=Arabidopsis thaliana OX=3702 GN=HAT3.1 PE=1 SV=3)

HSP 1 Score: 230.7 bits (587), Expect = 5.0e-59
Identity = 170/514 (33.07%), Postives = 246/514 (47.86%), Query Frame = 0 

Query: 132 RRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEKE 191
           +++ K   K +  E DE +R++++ RY + ++  EQ+LIDAYS EGWKG S EKI+PEKE
Sbjct: 160 KKKNKTMNKGQVREDDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKE 219

Query: 192 LQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFCAKCKLREAFPD 251
           L+RA K+IL  KL IRD  + LD L + GS+  ++   DG +  E IFCAKC  ++   D
Sbjct: 220 LERATKEILRRKLKIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVD 279

Query: 252 NDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEGMNAHLGTSFST 311
           NDIILCDG C+  FHQ C++PPL  ++IPP D+GW C  C+CK   L+ +N  LGT FS 
Sbjct: 280 NDIILCDGFCDRGFHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSV 339

Query: 312 NISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKENLRGDENDKDVLEESS 371
           + SWE +F E AA   GG    N + D PSDDS D++YDPD   +   DE+  D  EES 
Sbjct: 340 SDSWEKIFPEAAAALVGGGQ--NLDCDLPSDDSDDEEYDPDCLNDNENDEDGSDDNEESE 399

Query: 372 SS---------TSLSWSL-----DGEDLT----------------DTDGIRCEDHFGAGS 431
           +          TS S  +     +G+D+                 D D   C+D   + +
Sbjct: 400 NEDGSSDETEFTSASDEMIESFKEGKDIMKDVMALPSDDSEDDDYDPDAPTCDDDKESSN 459

Query: 432 S------------------------------------------LVSD-GSNEGELTCGRR 491
           S                                          L SD G ++G     RR
Sbjct: 460 SDCTSDTEDLETSFKGDETNQQAEDTPLEDPGRQTSQLQGDAILESDVGLDDGPAGVSRR 519

Query: 492 KR-QAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKE------------------K 547
           +  + +DYK LY E +          S+D+DW    R  KE                   
Sbjct: 520 RNVERLDYKKLYDEEYDN---VPTSSSDDDDWDKTARMGKEDSESEDEGDTVPLKQSSNA 579

[Close]
BLAST of Sed0011029.4 vs. ExPASy Swiss-Prot
Match: P46605 (Homeobox protein HOX1A OS=Zea mays OX=4577 GN=HOX1A PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.6e-59
Identity = 196/650 (30.15%), Postives = 300/650 (46.15%), Query Frame = 0 

Query: 42  SKQRKPRAKSHVQAIGSTFKRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELIL 101
           S  + P +  H   + ST +  P    + K  K    R   G + L  +     S    +
Sbjct: 21  SSSQNPESLEH-SVLLSTSQTMPNNLGIRKNYKRAANRGKKGSQGLTGQAYTLMSSNSDV 80

Query: 102 SKLQGRKSLPSTSTKVNAEKVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLII 161
             L+   S  +TST+     V+P AK      RRK      K   DE S++++R RY++ 
Sbjct: 81  RVLRSTSSSKTTSTEHVQAPVQPAAK------RRKMSRASNKSSTDEFSQIRKRVRYILN 140

Query: 162 KMKLEQNLIDAYSGEGWKGQSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGS 221
           +M  EQ+LI+AY+ EGWK QS +KI+PEKEL+RA  +IL CKL IR+  R +D L S G 
Sbjct: 141 RMNYEQSLIEAYASEGWKNQSLDKIRPEKELERAKSEILRCKLRIREVFRNIDSLLSKGK 200

Query: 222 IEGNVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPP 281
           I+  +   +G +  E IFC+ C   +A   NDIILCDG C+  FHQ C++PPL T++IP 
Sbjct: 201 IDETLFDSEGEISCEDIFCSTCGSNDATLGNDIILCDGACDRGFHQNCLNPPLRTEDIPM 260

Query: 282 GDQGWFCKFCECKMKILEGMNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPS 341
           GD+GW C  C+CK+  ++ +N   G++ S   SWE VF + AA     ++  +   D PS
Sbjct: 261 GDEGWLCPACDCKIDCIDLINELHGSNISIEDSWEKVFPDAAAM--ANDSKQDDAFDLPS 320

Query: 342 DDSADDDYDPDKKE------NLRGDENDKDVLEESSSSTSLSWSLDGEDLTD--TDGIRC 401
           DDS D+D+DP+  E      +    E D+D   +S  S  L+ S D E L D   D +R 
Sbjct: 321 DDSDDNDFDPNMPEEHVVGKDEESSEEDEDGGSDSDDSDFLTCSDDSEPLIDKKVDDLRL 380

Query: 402 -------EDHFGAG-----------SSLVSDGSNEGELTC-------------------- 461
                  +D+  AG           SS  SD +++ +  C                    
Sbjct: 381 PSEDSEDDDYDPAGPDSDKDVEKKSSSDESDFTSDSDDFCKEISKSGHDEVSSPLLPDAK 440

Query: 462 ----------------------------------GRRKRQAVDYKNLYVEMFGKDGPAQE 521
                                              RR+ + +DYK LY E +G+   A  
Sbjct: 441 VGDMEKITAQAKTTSSADDPMETEIDQGVVLPDSRRRQAERLDYKKLYDEAYGE---ASS 500

Query: 522 LGSEDEDWG----PAKRRRKEKECDAASTLMSLCENEKKSEDIDMEAEKKLLNSQSRSVF 581
             S+DE+W     P  +  +E E ++ +   S   +   ++++  ++ KK L+S   SV 
Sbjct: 501 DSSDDEEWSGKNTPIIKSNEEGEANSPAGKGSRVVHH--NDELTTQSTKKSLHSIHGSVD 560

Query: 582 RIPRYAV------------------EKLRQVFADNELPSKDVKENLSKELGLDAEKVSKW 588
             P                      +KL + F     PS+ VKE+L++ELGL   +V+KW
Sbjct: 561 EKPGDLTSNGSNSTARKGHFGPVINQKLHEHFKTQPYPSRSVKESLAEELGLTFRQVNKW 620

[Close]
BLAST of Sed0011029.4 vs. ExPASy Swiss-Prot
Match: P48786 (Pathogenesis-related homeodomain protein OS=Petroselinum crispum OX=4043 GN=PRH PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.2e-56
Identity = 202/665 (30.38%), Postives = 295/665 (44.36%), Query Frame = 0 

Query: 14   GKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTFKR---RPLPKSLS 73
            G+    KV+TG E ++P+             ++  AKS  Q +G T KR   RP     S
Sbjct: 373  GRGRPRKVQTGLEQLVPV-------------QETAAKSSSQ-LGDTGKRSRGRPRKVQDS 432

Query: 74   KGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAEKVEPGAKMKQ 133
              +    ++ +  +    ++L   SS+      L+ R    S    VN    + GA  ++
Sbjct: 433  PTSLGGNVKVVPEKGKDSQELSVNSSR-----SLRSRSQEKSIEPDVNNIVADEGADREK 492

Query: 134  QRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEK 193
             R++RKK+ ++ +V  DE  R++   RYL+ ++K E+N +DAYSGEGWKGQS +KIKPEK
Sbjct: 493  PRKKRKKRMEENRV--DEFCRIRTHLRYLLHRIKYEKNFLDAYSGEGWKGQSLDKIKPEK 552

Query: 194  ELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFCAKCKLREAFP 253
            EL+RA  +I   KL IRD  + LD+  S G +   +    G +  E IFCAKC  ++   
Sbjct: 553  ELKRAKAEIFGRKLKIRDLFQRLDLARSEGRLPEILFDSRGEIDSEDIFCAKCGSKDVTL 612

Query: 254  DNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEGMNAHLGTSFS 313
             NDIILCDG C+  FHQ C+DPPL  + IPP D+GW C  CECK+  ++ +N    T+  
Sbjct: 613  SNDIILCDGACDRGFHQFCLDPPLLKEYIPPDDEGWLCPGCECKIDCIKLLNDSQETNIL 672

Query: 314  TNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYD---PDKKENLRGDENDKDVL 373
               SWE VF EEAA    G   L+     PSDDS DDDYD   PD  E ++GD++  D  
Sbjct: 673  LGDSWEKVFAEEAAAAASGKN-LDDNSGLPSDDSEDDDYDPGGPDLDEKVQGDDSSTDES 732

Query: 374  EESSSSTSL-------SWSLDGEDLTD---------TDGI-----------RCEDHFGAG 433
            +  S S  +       S  L  +D  D         TD +             ED  G  
Sbjct: 733  DYQSESDDMQVIRQKNSRGLPSDDSEDDEYDPSGLVTDQMYKDSSCSDFTSDSEDFTGVF 792

Query: 434  SSLVSDGSNEGELT------------CG------------RRKRQAVDYKNLYVEMFGK- 493
                  G  +G L             CG            RR+ +++DYK L    F K 
Sbjct: 793  DDYKDTGKAQGPLASTPDHVRNNEEGCGHPEQGDTAPLYPRRQVESLDYKKLNDIEFSKM 852

Query: 494  ----------------DGPAQELG-----SEDEDWGPAKRRRKEKECDAASTLMSLCENE 553
                             G  +E G     S DED+       K    D  +T M   E  
Sbjct: 853  CDILDILSSQLDVIICTGNQEEYGNTSSDSSDEDYMVTSSPDKNNS-DKEATAM---ERG 912

Query: 554  KKSEDIDMEAEKK-------------------------------LLNSQSRSVFRIPRYA 569
            ++S D++++ + +                               +  S+S S      +A
Sbjct: 913  RESGDLELDQKARESTHNRRYIKKFAVEGTDSFLSRSCEDSAAPVAGSKSTSKTLHGEHA 972

[Close]
BLAST of Sed0011029.4 vs. ExPASy Swiss-Prot
Match: Q8H991 (Homeobox protein HAZ1 OS=Oryza sativa subsp. japonica OX=39947 GN=HAZ1 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.9e-54
Identity = 196/672 (29.17%), Postives = 303/672 (45.09%), Query Frame = 0 

Query: 34  KRCSKISNSKQRKPRAK-SHVQAIGSTFKRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLD 93
           ++ S+IS SK    R+  S+V+ + S  K++     +   N N  ++ +A ++   K L 
Sbjct: 48  RKGSQISPSKTYPLRSSHSNVRVLRSASKKKN-ETPIVPTNDNTAVQRVAKKRKRSKPLR 107

Query: 94  PKSSKELILSKLQGRKSLPSTSTKVNAEKVEPGAKMKQQRRRRK-KKGKKEKVELDEASR 153
           P  S+ L        +S      K + E +  GA ++   ++RK  +  K     D+   
Sbjct: 108 PAPSRVL--------RSTSEKKNKAHNELLNDGAGVQPAEKKRKVGRPPKGGTPKDDYLM 167

Query: 154 LQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEKELQRAVKQILNCKLGIRDAIR 213
           +++R RY++ +M  EQ+LI AY+ EGWKGQS EKI+PEKEL+RA  +IL CK  IR+A R
Sbjct: 168 IRKRVRYVLNRMNYEQSLIQAYASEGWKGQSLEKIRPEKELERAKVEILRCKSRIREAFR 227

Query: 214 ELDMLGSVGSIEGNVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNSAFHQKCMD 273
            LD L S G ++ ++    G +  E IFCA C  ++    NDIILCDG C+  FHQ C++
Sbjct: 228 NLDSLLSEGKLDESMFDSAGEISSEDIFCAACGSKDVTLKNDIILCDGICDRGFHQYCLN 287

Query: 274 PPLDTKNIPPGDQGWFCKFCECKMKILEGMNAHLGTSFSTNISWEDVFKEEAAFPDGGNA 333
           PPL  ++IP GD+GW C  C+CK+  ++ +N   G   S + SWE VF E A+F +G   
Sbjct: 288 PPLLAEDIPQGDEGWLCPACDCKIDCIDVLNELQGVKLSIHDSWEKVFPEAASFLNGSKQ 347

Query: 334 LLNHEEDWPSDDSADDDYDPDKKENLRGDENDK------DVLEESSSSTSLSWSLDGEDL 393
           +     D PSDDSAD+DYDP   +  + DE         + L+   SS+  S S + E  
Sbjct: 348 I--DASDLPSDDSADNDYDPTLAQGHKVDEEKSSGEDGGEGLDSDDSSSEDSESSEKEKS 407

Query: 394 TDTDGIRCEDHFGAGSSLVSDG---------------------SNEGELT---------- 453
             +   R  D  G  S    DG                     S+E + T          
Sbjct: 408 KTSQNGRTVDDLGLPSEDSEDGDFDPAGPDSDKEQNDESNSDQSDESDFTSDSDDFCAEI 467

Query: 454 ---CG---------------------------------------------------RRKR 513
              CG                                                   +R+ 
Sbjct: 468 AKSCGQDEISGPSSSQIRTVDRTDGSGFDGEPNAENSNLAFMETELEQDMVLPISSKRQV 527

Query: 514 QAVDYKNLYVEMFGKDGPAQELGSEDEDW----GPAKRRRKEKECDAAS----------- 573
           + +DYK LY E +GK   A    S+DE+W     P K   ++ E D+ +           
Sbjct: 528 ERLDYKKLYNEAYGK---ASSDSSDDEEWYGNSTPEKGNLEDSETDSLAESPQGGKGFSR 587

Query: 574 -TLMSLCENEKKSEDI-------DMEAEKKLLNSQ-SRSVFRIPRYAV-EKLRQVFADNE 587
              +    NE   +++       D + E    NS  S +  R    A+ +KL+  F ++ 
Sbjct: 588 RAPVRYHNNEHTPQNVRPGGSVSDQQTEVLCSNSNGSTAKNRHFGPAINQKLKAHFKEDP 647

[Close]
BLAST of Sed0011029.4 vs. ExPASy TrEMBL
Match: A0A6J1IDC7 (pathogenesis-related homeodomain protein OS=Cucurbita maxima OX=3661 GN=LOC111472777 PE=3 SV=1)

HSP 1 Score: 1118.2 bits (2891), Expect = 0.0e+00
Identity = 588/716 (82.12%), Postives = 635/716 (88.69%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           MRGTGRRLTQKESGKCSHSK+ETGSEL+LPLKLKRCSKIS+SKQ+K R KSH Q IGST 
Sbjct: 1   MRGTGRRLTQKESGKCSHSKMETGSELILPLKLKRCSKISHSKQKKSRTKSHAQEIGSTL 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRP PKSLSKGNKNVTIR LAG+K L KKL+ K +K+L+LSKLQG KSLPS ST+ NAE
Sbjct: 61  KRRPFPKSLSKGNKNVTIRQLAGKKFLLKKLNSKYTKDLLLSKLQGGKSLPSPSTEGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+RRK KGK+EKVELDEASRLQRRTRYLIIK+KLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVTKINQQRKRRKNKGKREKVELDEASRLQRRTRYLIIKIKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA++QIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMEQILQCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS N+SWED+FKEEAAFPDG NA LNHEEDWPSDDSADDDYDPDKKE    N
Sbjct: 301 MNAHLGTRFSMNVSWEDIFKEEAAFPDGRNASLNHEEDWPSDDSADDDYDPDKKEIGYDN 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
             G+ENDKDV EESSSSTSLSWSLDGEDLTD D I CEDHFGA SS+VSDGSNE  +T G
Sbjct: 361 PSGEENDKDVFEESSSSTSLSWSLDGEDLTDRDSIGCEDHFGASSSIVSDGSNEEGITGG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LYVEMFGKD  A E  SEDEDWGPAKRRR+EKECDAASTLMSLCE+EKK
Sbjct: 421 RRQRQAVDYKKLYVEMFGKDSTAHEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKK 480

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S+ ID+EAEK+ LNSQSRS FRIP YAVEKLRQVFA+NELPS+DVKENLS ELGLDAEKV
Sbjct: 481 SKKIDVEAEKRPLNSQSRSFFRIPLYAVEKLRQVFAENELPSRDVKENLSIELGLDAEKV 540

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLKS 600
           SKWFKNARYSALR RK EGATQS SPNKT NE RL+D+KEMS    SSED PIKELQLKS
Sbjct: 541 SKWFKNARYSALRTRKAEGATQSHSPNKTLNEPRLADSKEMSACPPSSEDAPIKELQLKS 600

Query: 601 SNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGG--SQQ 660
            NS YKKKQHRKSSL       DA    DDISLK+LLKNRKAK+KKRVKFV  GG   Q+
Sbjct: 601 RNSHYKKKQHRKSSLVSSNNNKDALDSGDDISLKNLLKNRKAKVKKRVKFVARGGDRGQE 660

Query: 661 AEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           AE+EMERLCKIKGRLEIMKQKLLRLSN K+DG+L++S+MFEQSIVYVPVAVLKE V
Sbjct: 661 AEVEMERLCKIKGRLEIMKQKLLRLSNKKEDGVLDRSHMFEQSIVYVPVAVLKEKV 716

[Close]
BLAST of Sed0011029.4 vs. ExPASy TrEMBL
Match: A0A6J1F0M4 (pathogenesis-related homeodomain protein OS=Cucurbita moschata OX=3662 GN=LOC111441056 PE=3 SV=1)

HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 585/721 (81.14%), Postives = 635/721 (88.07%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           M+GTGRRLTQKESGKCSHSK+ETGSEL+LPLKLKRCSKIS+SKQ+K R KSH Q IGST 
Sbjct: 1   MKGTGRRLTQKESGKCSHSKMETGSELILPLKLKRCSKISHSKQKKSRTKSHAQEIGSTL 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRP PKSLSKGNKNVTIR LAG+K L KKL+ K +K+L+LSKLQG KSLPS+ST+ NAE
Sbjct: 61  KRRPFPKSLSKGNKNVTIRQLAGKKFLLKKLNSKYTKDLLLSKLQGGKSLPSSSTEGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+RRK KGK+EKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVTKINQQRKRRKNKGKREKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA+KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMKQILQCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKE----N 360
           MNAHLGT FS N+SWED+FKEEAAFPDG NA LNHEEDWPSDDSADDDYDPDK E    N
Sbjct: 301 MNAHLGTRFSMNVSWEDIFKEEAAFPDGRNASLNHEEDWPSDDSADDDYDPDKNEIGYDN 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
           L G+ENDKDV EESSSSTSLSWSLDGEDLTD DGI CEDHFGA SS+VSDGSNE  +T G
Sbjct: 361 LSGEENDKDVFEESSSSTSLSWSLDGEDLTDRDGIGCEDHFGASSSIVSDGSNEEGITGG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LYVEMFGKD  A E  SEDEDWGPAKRRR+EKECDAASTLMSLCE+EKK
Sbjct: 421 RRQRQAVDYKKLYVEMFGKDSTAHEQVSEDEDWGPAKRRRREKECDAASTLMSLCESEKK 480

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S  ID+EAEK+ LNSQSRS FRIP YAVEKLRQVFA+NELPS++VKENLS ELGLDAEKV
Sbjct: 481 SPKIDVEAEKRPLNSQSRSFFRIPLYAVEKLRQVFAENELPSREVKENLSIELGLDAEKV 540

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRL-SDTKEMSTNLLSSEDVPIKELQLK 600
           SKWFKNARYSALR RK EGATQS SPNKT N+ RL +D+KEMS    SSED PIKELQLK
Sbjct: 541 SKWFKNARYSALRTRKAEGATQSHSPNKTLNDPRLAADSKEMSACPPSSEDAPIKELQLK 600

Query: 601 SSNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGG---- 660
           S N+ YKKKQHRKSSL       DA    DDISLK+LLKNRK K+KKRVKFV  GG    
Sbjct: 601 SRNTHYKKKQHRKSSLVSSNNNKDALDSGDDISLKNLLKNRKTKVKKRVKFVARGGGRGR 660

Query: 661 --SQQAEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEM 704
              Q+AE+EMERLCKIKGRLEIMKQKLLRLSN K+DG+L++S+MFEQSI+YVPVAVLKE 
Sbjct: 661 GRGQEAEVEMERLCKIKGRLEIMKQKLLRLSNEKEDGVLDRSHMFEQSIIYVPVAVLKEK 720

[Close]
BLAST of Sed0011029.4 vs. ExPASy TrEMBL
Match: A0A0A0LUQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G424880 PE=3 SV=1)

HSP 1 Score: 1094.0 bits (2828), Expect = 0.0e+00
Identity = 578/715 (80.84%), Postives = 623/715 (87.13%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           MRG G+RL  +ES KCSHSK+E+GSEL+  LKL RCSKIS+SKQ+K R KSH QAI STF
Sbjct: 1   MRGAGKRL-MEESEKCSHSKLESGSELIFSLKLTRCSKISHSKQKKSRMKSHSQAICSTF 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRPLPKSLSKGNKNVTIR LAG+K L KKLD K SKEL+LSKLQG KSL ST+TK NAE
Sbjct: 61  KRRPLPKSLSKGNKNVTIRQLAGKKFLLKKLDTKPSKELLLSKLQGEKSLSSTNTKGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+R+K KGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 121 KVEPVVKINQQRKRKKNKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA+KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 QSREKIRPEKELQRAMKQILKCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDTK+IPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTKSIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKENLRG- 360
           MNAHLGT FS NI WED+FKEEAAFPDGGNALLNHEEDWPSDDS DDDYDPDKKEN    
Sbjct: 301 MNAHLGTRFSLNIGWEDIFKEEAAFPDGGNALLNHEEDWPSDDSEDDDYDPDKKENCHDN 360

Query: 361 ---DENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
              +ENDK+VLEESSSSTSLSWSLDGEDL   +GI CEDHFGAG+S+VSDGSNE  +TCG
Sbjct: 361 ASEEENDKEVLEESSSSTSLSWSLDGEDLVSGNGIGCEDHFGAGTSIVSDGSNEEGITCG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELG-SEDEDWGPAKRRRKEKECDAASTLMSLCENEK 480
           RR+R AVDYK LY EMFGKD PA E   SEDEDWGPAKRRR+EKECDAASTLMSLCE+EK
Sbjct: 421 RRQRHAVDYKKLYDEMFGKDTPAHEQEVSEDEDWGPAKRRRREKECDAASTLMSLCESEK 480

Query: 481 KSEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEK 540
           KS+DIDMEAEKKLLNS  RS FRIPR+AVEKLR+VFADNELPS+DVKENLSKELGLDAEK
Sbjct: 481 KSQDIDMEAEKKLLNSHGRSFFRIPRHAVEKLRKVFADNELPSRDVKENLSKELGLDAEK 540

Query: 541 VSKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLK 600
           VSKWFKNARYSALR RK EGATQ  S +KTSNE RL+D+KEMS NLLS E+ PIKELQLK
Sbjct: 541 VSKWFKNARYSALRTRKAEGATQPHSSHKTSNELRLADSKEMSKNLLSLENAPIKELQLK 600

Query: 601 SSNSRYKKKQHRKSS-------LDAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGGSQQA 660
              S  KKKQHRKSS        DAF F DDISLK+LLK RK K+KKRV FV  G  Q A
Sbjct: 601 LHGSHSKKKQHRKSSHVSSNYNKDAFDFGDDISLKNLLKKRKTKVKKRVNFVARGEGQAA 660

Query: 661 EMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           E+EMERLCKIKGRLE MKQKLLRLS  KDDGIL++S+M EQSIVYVPVAVLKE V
Sbjct: 661 ELEMERLCKIKGRLETMKQKLLRLSKRKDDGILDRSHMIEQSIVYVPVAVLKEKV 714

[Close]
BLAST of Sed0011029.4 vs. ExPASy TrEMBL
Match: A0A5D3DZB2 (Pathogenesis-related homeodomain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002280 PE=3 SV=1)

HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 577/715 (80.70%), Postives = 618/715 (86.43%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           MRG G+RL + ES KCSHSK+ETGSEL+ PLKL RCSKIS+SKQ+K R KSH QAI STF
Sbjct: 31  MRGAGKRLIE-ESEKCSHSKLETGSELIFPLKLTRCSKISHSKQKKSRTKSHSQAICSTF 90

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRR LPKSLSKGNKNVTIR LAG+  L KKLD K SKEL+LSKLQG KSLPST+TK NAE
Sbjct: 91  KRRSLPKSLSKGNKNVTIRQLAGKTFLLKKLDTKPSKELLLSKLQGGKSLPSTNTKGNAE 150

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVEP  K+ QQR+R+K KGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG
Sbjct: 151 KVEPVVKINQQRKRKKNKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 210

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
           QSREKI+PEKELQRA KQIL CKLGIRDAIR+LD+LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 211 QSREKIRPEKELQRAKKQILKCKLGIRDAIRQLDLLGSVGCIEDSVIGPDGSVYHEHIFC 270

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDTK+IPPGDQGWFCKFCECKM+ILEG
Sbjct: 271 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTKSIPPGDQGWFCKFCECKMEILEG 330

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKENLRG- 360
           MNAHLGT F  NI WEDVFKEEAAFPDGGNALLNHEEDWPSDDS DDDYDPDKKEN    
Sbjct: 331 MNAHLGTRFPLNIGWEDVFKEEAAFPDGGNALLNHEEDWPSDDSEDDDYDPDKKENGHDN 390

Query: 361 ---DENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
              +ENDKDVLEESSSSTSLSWSLDGEDL   DGI CEDHFGAG+S+VSDGSNE  +TCG
Sbjct: 391 GSEEENDKDVLEESSSSTSLSWSLDGEDLIPGDGIGCEDHFGAGTSIVSDGSNEEGITCG 450

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELG-SEDEDWGPAKRRRKEKECDAASTLMSLCENEK 480
           RR+RQAVDYK LY EMFGKD PA E   SEDEDWGPAKRRR+EKECDAASTLMSLCE+EK
Sbjct: 451 RRQRQAVDYKKLYDEMFGKDAPAHEQEVSEDEDWGPAKRRRREKECDAASTLMSLCESEK 510

Query: 481 KSEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEK 540
           KS+DIDMEAEKKLLNS  RS FRIPR+AVEKLR+VFA NELPS+D+KENLSKELGLDAEK
Sbjct: 511 KSQDIDMEAEKKLLNSHGRSFFRIPRHAVEKLREVFAANELPSRDIKENLSKELGLDAEK 570

Query: 541 VSKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLK 600
           VSKWFKNARYSALR RK EGATQ  S   TSNE RL+D+KEMS NL S ED PIKELQLK
Sbjct: 571 VSKWFKNARYSALRTRKAEGATQPHSSYTTSNEPRLADSKEMSENLHSLEDAPIKELQLK 630

Query: 601 SSNSRYKKKQHRKSS-------LDAFGFDDDISLKSLLKNRKAKIKKRVKFVTSGGSQQA 660
              S  KKKQHRKSS        DAF F DDISLK+LLK RK K+KKRV FV  G  Q+ 
Sbjct: 631 LRGSHSKKKQHRKSSHVSSNHNKDAFDFGDDISLKNLLKKRKTKVKKRVNFVARGEGQET 690

Query: 661 EMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           E+EMERLCKIKGRLE MKQKLLRL+  KDDGIL++S+M EQSIVYVPVAVLKE V
Sbjct: 691 ELEMERLCKIKGRLETMKQKLLRLTKRKDDGILDRSHMIEQSIVYVPVAVLKEKV 744

[Close]
BLAST of Sed0011029.4 vs. ExPASy TrEMBL
Match: A0A6J1C1X8 (pathogenesis-related homeodomain protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007205 PE=3 SV=1)

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 566/716 (79.05%), Postives = 625/716 (87.29%), Query Frame = 0 

Query: 1   MRGTGRRLTQKESGKCSHSKVETGSELVLPLKLKRCSKISNSKQRKPRAKSHVQAIGSTF 60
           MRG GR+L  KESGKCSHSK+E GSEL+L  KLKRCSKI +SKQ+KPR KSH Q  GST+
Sbjct: 1   MRGAGRKLIHKESGKCSHSKLEAGSELILSPKLKRCSKIYHSKQKKPRTKSHAQPTGSTY 60

Query: 61  KRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSKLQGRKSLPSTSTKVNAE 120
           KRRPLPK+LSKGNKNVTIR LAG+K L KKLD KSSK+L LS+LQG KSL ST+ K NAE
Sbjct: 61  KRRPLPKALSKGNKNVTIRQLAGKKFLLKKLDTKSSKDLFLSRLQGGKSLSSTNLKGNAE 120

Query: 121 KVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKG 180
           KVE  AK  QQR+RRK K K+EK+ELDEASRLQRR+RYL+IKMKLEQNLIDAYSGEGWKG
Sbjct: 121 KVEQVAKKNQQRKRRKNKRKREKLELDEASRLQRRSRYLMIKMKLEQNLIDAYSGEGWKG 180

Query: 181 QSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFC 240
            SREKIKPEKELQRA+KQIL CKLGIRDA+R+L +LGSVG IE +VIGPDGSVYHEHIFC
Sbjct: 181 HSREKIKPEKELQRAMKQILKCKLGIRDALRQLHLLGSVGCIEDSVIGPDGSVYHEHIFC 240

Query: 241 AKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEG 300
           AKCKLREAFPDNDIILCDGTCN AFHQKC+DPPLDT+NIPPGDQGWFCKFCECKM+ILEG
Sbjct: 241 AKCKLREAFPDNDIILCDGTCNCAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMEILEG 300

Query: 301 MNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKEN---- 360
           MNAHLGT FS NI WEDVFKEEAAFPDGGNALLNHEEDWPSDDS DDDY+PDKKEN    
Sbjct: 301 MNAHLGTRFSLNIRWEDVFKEEAAFPDGGNALLNHEEDWPSDDSEDDDYNPDKKENGNEK 360

Query: 361 LRGDENDKDVLEESSSSTSLSWSLDGEDLTDTDGIRCEDHFGAGSSLVSDGSNEGELTCG 420
           L G+END  +LEESSSSTSLSWSLDGEDLTD DGI CEDHFG G+S+VSDGS E  + CG
Sbjct: 361 LSGEENDTHLLEESSSSTSLSWSLDGEDLTDRDGIACEDHFGVGTSIVSDGSIEEGIVCG 420

Query: 421 RRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKEKECDAASTLMSLCENEKK 480
           RR+RQAVDYK LY EMFGKD PAQE  SEDEDWGPAKR+R+EKECDAASTLMSLCE+EKK
Sbjct: 421 RRQRQAVDYKKLYSEMFGKDAPAQEQVSEDEDWGPAKRKRREKECDAASTLMSLCESEKK 480

Query: 481 SEDIDMEAEKKLLNSQSRSVFRIPRYAVEKLRQVFADNELPSKDVKENLSKELGLDAEKV 540
           S+DIDMEA+KKL NS+SRS FRIPRYAVEKLRQVFADNELPS+DVKENLSKELGLDAEKV
Sbjct: 481 SQDIDMEADKKLPNSKSRSFFRIPRYAVEKLRQVFADNELPSRDVKENLSKELGLDAEKV 540

Query: 541 SKWFKNARYSALRARKVEGATQSLSPNKTSNEFRLSDTKEMSTNLLSSEDVPIKELQLKS 600
           +KWFKNARYSALR RK EGATQS S +KTS EFRL+D+KE + N L++ED  IKELQLKS
Sbjct: 541 NKWFKNARYSALRTRKAEGATQSHSFSKTSTEFRLADSKENAGNHLTTEDTSIKELQLKS 600

Query: 601 SNSRYKKKQHRKSSL-------DAFGFDDDISLKSLLKNRKAKIKKRVKFV--TSGGSQQ 660
            N  YKKKQHR+SSL       DA  F DDISLK+LLKNRK K++K+V FV  + GG Q+
Sbjct: 601 RNGLYKKKQHRRSSLVSFNSNKDALDFGDDISLKNLLKNRKTKVRKKVNFVGRSKGGGQE 660

Query: 661 AEMEMERLCKIKGRLEIMKQKLLRLSNNKDDGILNKSNMFEQSIVYVPVAVLKEMV 704
           AE+E+ERLCKIK RLEIMKQK+LRLSN KDDG L++ +MFEQSI+YVPVAVLKE V
Sbjct: 661 AEVELERLCKIKDRLEIMKQKILRLSNKKDDGTLDRLHMFEQSIIYVPVAVLKEKV 716

[Close]
BLAST of Sed0011029.4 vs. TAIR 10
Match: AT4G29940.1 (pathogenesis related homeodomain protein A )

HSP 1 Score: 502.3 bits (1292), Expect = 6.4e-142
Identity = 280/529 (52.93%), Postives = 363/529 (68.62%), Query Frame = 0 

Query: 44  QRKPRAKSHVQAIGSTFKRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSK 103
           Q   +A   V+ IGST     L  S  K  K V+ +          K + + ++E + SK
Sbjct: 12  QETDKACVSVERIGST-----LLSSFVKKGKEVSNKR-------NSKQNKRKAEEELCSK 71

Query: 104 LQGRKSLPSTSTKVNAEKVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKM 163
            + +K    +   V  E++E     K ++R+ K++ K  KVE+D++ RLQRRTRYL+IKM
Sbjct: 72  SRTKK---YSRGWVRCEEMEEEKVKKTRKRKSKRQQKDNKVEVDDSLRLQRRTRYLLIKM 131

Query: 164 KLEQNLIDAYSGEGWKGQSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIE 223
           K++QNLIDAY+ EGWKGQSREKI+P+KEL+RA K+ILNCKLG+RDAIR+LD+L SVGS+E
Sbjct: 132 KMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNCKLGLRDAIRQLDLLSSVGSME 191

Query: 224 GNVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGD 283
             VI  DGS++H+HIFCA+C  REAFPDNDIILCDGTCN AFHQKC+DPPL+T++IPPGD
Sbjct: 192 EKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCNRAFHQKCLDPPLETESIPPGD 251

Query: 284 QGWFCKFCECKMKILEGMNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDD 343
           QGWFCKFC+CK++I++ MNA +GT F  + +W+D+F EEA+ P G  A +N+E DWPSDD
Sbjct: 252 QGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEEASLPIGSEATVNNEADWPSDD 311

Query: 344 SADDDYDPDKKENLRGDENDKDVL-------EESSSSTSLSWSLDGEDLTDTDGIRCEDH 403
           S DDDYDP+ +EN  G  N  +V        +E S STSLS S DG  L+       E H
Sbjct: 312 SKDDDYDPEMREN--GGGNSSNVSGDGGGDNDEESISTSLSLSSDGVALSTGS---WEGH 371

Query: 404 FGAGSSLVSDGSNEGELTCGRRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRR 463
             +      + SNE E  CG R+R+ VDY  LY EMFGKD   QE GSEDEDWGP  RR+
Sbjct: 372 RLSNMVEQCETSNE-ETVCGPRQRRTVDYTQLYYEMFGKDAVLQEQGSEDEDWGPNDRRK 431

Query: 464 KEKECDAASTLMSLCENEKKSEDIDMEAEKKLLNSQS-------RSVFRIPRYAVEKLRQ 523
           +++E DA STL+++CE+ KK +D+    E+   +S S       R +FR+PR AVEKLRQ
Sbjct: 432 RKRESDAGSTLVTMCESSKKDQDVVETLEQSERDSVSVENKGGRRRMFRLPRNAVEKLRQ 491

Query: 524 VFADNELPSKDVKENLSKELGLDAEKVSKWFKNARYSALRARKVEGATQ 559
           VFA+ ELPSK V++ L+KEL LD EKV+KWFKN RY ALR RK E   Q
Sbjct: 492 VFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRYMALRNRKTESVKQ 519

[Close]
BLAST of Sed0011029.4 vs. TAIR 10
Match: AT4G29940.2 (pathogenesis related homeodomain protein A )

HSP 1 Score: 502.3 bits (1292), Expect = 6.4e-142
Identity = 280/529 (52.93%), Postives = 363/529 (68.62%), Query Frame = 0 

Query: 44  QRKPRAKSHVQAIGSTFKRRPLPKSLSKGNKNVTIRHLAGQKNLRKKLDPKSSKELILSK 103
           Q   +A   V+ IGST     L  S  K  K V+ +          K + + ++E + SK
Sbjct: 12  QETDKACVSVERIGST-----LLSSFVKKGKEVSNKR-------NSKQNKRKAEEELCSK 71

Query: 104 LQGRKSLPSTSTKVNAEKVEPGAKMKQQRRRRKKKGKKEKVELDEASRLQRRTRYLIIKM 163
            + +K    +   V  E++E     K ++R+ K++ K  KVE+D++ RLQRRTRYL+IKM
Sbjct: 72  SRTKK---YSRGWVRCEEMEEEKVKKTRKRKSKRQQKDNKVEVDDSLRLQRRTRYLLIKM 131

Query: 164 KLEQNLIDAYSGEGWKGQSREKIKPEKELQRAVKQILNCKLGIRDAIRELDMLGSVGSIE 223
           K++QNLIDAY+ EGWKGQSREKI+P+KEL+RA K+ILNCKLG+RDAIR+LD+L SVGS+E
Sbjct: 132 KMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILNCKLGLRDAIRQLDLLSSVGSME 191

Query: 224 GNVIGPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNSAFHQKCMDPPLDTKNIPPGD 283
             VI  DGS++H+HIFCA+C  REAFPDNDIILCDGTCN AFHQKC+DPPL+T++IPPGD
Sbjct: 192 EKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTCNRAFHQKCLDPPLETESIPPGD 251

Query: 284 QGWFCKFCECKMKILEGMNAHLGTSFSTNISWEDVFKEEAAFPDGGNALLNHEEDWPSDD 343
           QGWFCKFC+CK++I++ MNA +GT F  + +W+D+F EEA+ P G  A +N+E DWPSDD
Sbjct: 252 QGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNEEASLPIGSEATVNNEADWPSDD 311

Query: 344 SADDDYDPDKKENLRGDENDKDVL-------EESSSSTSLSWSLDGEDLTDTDGIRCEDH 403
           S DDDYDP+ +EN  G  N  +V        +E S STSLS S DG  L+       E H
Sbjct: 312 SKDDDYDPEMREN--GGGNSSNVSGDGGGDNDEESISTSLSLSSDGVALSTGS---WEGH 371

Query: 404 FGAGSSLVSDGSNEGELTCGRRKRQAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRR 463
             +      + SNE E  CG R+R+ VDY  LY EMFGKD   QE GSEDEDWGP  RR+
Sbjct: 372 RLSNMVEQCETSNE-ETVCGPRQRRTVDYTQLYYEMFGKDAVLQEQGSEDEDWGPNDRRK 431

Query: 464 KEKECDAASTLMSLCENEKKSEDIDMEAEKKLLNSQS-------RSVFRIPRYAVEKLRQ 523
           +++E DA STL+++CE+ KK +D+    E+   +S S       R +FR+PR AVEKLRQ
Sbjct: 432 RKRESDAGSTLVTMCESSKKDQDVVETLEQSERDSVSVENKGGRRRMFRLPRNAVEKLRQ 491

Query: 524 VFADNELPSKDVKENLSKELGLDAEKVSKWFKNARYSALRARKVEGATQ 559
           VFA+ ELPSK V++ L+KEL LD EKV+KWFKN RY ALR RK E   Q
Sbjct: 492 VFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRYMALRNRKTESVKQ 519

[Close]
BLAST of Sed0011029.4 vs. TAIR 10
Match: AT3G19510.1 (Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain )

HSP 1 Score: 230.7 bits (587), Expect = 3.6e-60
Identity = 170/514 (33.07%), Postives = 246/514 (47.86%), Query Frame = 0 

Query: 132 RRRRKKKGKKEKVELDEASRLQRRTRYLIIKMKLEQNLIDAYSGEGWKGQSREKIKPEKE 191
           +++ K   K +  E DE +R++++ RY + ++  EQ+LIDAYS EGWKG S EKI+PEKE
Sbjct: 160 KKKNKTMNKGQVREDDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKE 219

Query: 192 LQRAVKQILNCKLGIRDAIRELDMLGSVGSIEGNVIGPDGSVYHEHIFCAKCKLREAFPD 251
           L+RA K+IL  KL IRD  + LD L + GS+  ++   DG +  E IFCAKC  ++   D
Sbjct: 220 LERATKEILRRKLKIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVD 279

Query: 252 NDIILCDGTCNSAFHQKCMDPPLDTKNIPPGDQGWFCKFCECKMKILEGMNAHLGTSFST 311
           NDIILCDG C+  FHQ C++PPL  ++IPP D+GW C  C+CK   L+ +N  LGT FS 
Sbjct: 280 NDIILCDGFCDRGFHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSV 339

Query: 312 NISWEDVFKEEAAFPDGGNALLNHEEDWPSDDSADDDYDPDKKENLRGDENDKDVLEESS 371
           + SWE +F E AA   GG    N + D PSDDS D++YDPD   +   DE+  D  EES 
Sbjct: 340 SDSWEKIFPEAAAALVGGGQ--NLDCDLPSDDSDDEEYDPDCLNDNENDEDGSDDNEESE 399

Query: 372 SS---------TSLSWSL-----DGEDLT----------------DTDGIRCEDHFGAGS 431
           +          TS S  +     +G+D+                 D D   C+D   + +
Sbjct: 400 NEDGSSDETEFTSASDEMIESFKEGKDIMKDVMALPSDDSEDDDYDPDAPTCDDDKESSN 459

Query: 432 S------------------------------------------LVSD-GSNEGELTCGRR 491
           S                                          L SD G ++G     RR
Sbjct: 460 SDCTSDTEDLETSFKGDETNQQAEDTPLEDPGRQTSQLQGDAILESDVGLDDGPAGVSRR 519

Query: 492 KR-QAVDYKNLYVEMFGKDGPAQELGSEDEDWGPAKRRRKE------------------K 547
           +  + +DYK LY E +          S+D+DW    R  KE                   
Sbjct: 520 RNVERLDYKKLYDEEYDN---VPTSSSDDDDWDKTARMGKEDSESEDEGDTVPLKQSSNA 579

The following BLAST results are available for this feature:
BLAST of Sed0011029.4 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022974199.10.0e+0082.12pathogenesis-related homeodomain protein [Cucurbita maxima] >XP_022974200.1 path... [more]
XP_023531700.10.0e+0081.62pathogenesis-related homeodomain protein [Cucurbita pepo subsp. pepo] >XP_023531... [more]
XP_022933726.10.0e+0081.14pathogenesis-related homeodomain protein [Cucurbita moschata] >XP_022933727.1 pa... [more]
XP_038878480.10.0e+0081.98LOW QUALITY PROTEIN: pathogenesis-related homeodomain protein [Benincasa hispida... [more]
KAG7021700.10.0e+0080.38Pathogenesis-related homeodomain protein, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of Sed0011029.4 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P487859.0e-14152.93Pathogenesis-related homeodomain protein OS=Arabidopsis thaliana OX=3702 GN=PRH ... [more]
Q049965.0e-5933.07Homeobox protein HAT3.1 OS=Arabidopsis thaliana OX=3702 GN=HAT3.1 PE=1 SV=3[more]
P466058.6e-5930.15Homeobox protein HOX1A OS=Zea mays OX=4577 GN=HOX1A PE=2 SV=1[more]
P487865.2e-5630.38Pathogenesis-related homeodomain protein OS=Petroselinum crispum OX=4043 GN=PRH ... [more]
Q8H9912.9e-5429.17Homeobox protein HAZ1 OS=Oryza sativa subsp. japonica OX=39947 GN=HAZ1 PE=2 SV=1[more]
BLAST of Sed0011029.4 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IDC70.0e+0082.12pathogenesis-related homeodomain protein OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1F0M40.0e+0081.14pathogenesis-related homeodomain protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A0A0LUQ10.0e+0080.84Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G424880 PE=3 SV=1[more]
A0A5D3DZB20.0e+0080.70Pathogenesis-related homeodomain protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1C1X80.0e+0079.05pathogenesis-related homeodomain protein isoform X1 OS=Momordica charantia OX=36... [more]
BLAST of Sed0011029.4 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29940.16.4e-14252.93pathogenesis related homeodomain protein A [more]
AT4G29940.26.4e-14252.93pathogenesis related homeodomain protein A [more]
AT3G19510.13.6e-6033.07Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 239..292
e-value: 7.7E-9
score: 45.4
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 492..554
e-value: 3.2E-10
score: 49.9
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 501..545
e-value: 1.1E-7
score: 31.5
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 490..550
score: 12.308851
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 494..549
e-value: 1.58194E-8
score: 49.5493
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 231..288
e-value: 1.9E-12
score: 48.6
NoneNo IPR availableGENE3D1.10.10.60coord: 491..561
e-value: 3.4E-11
score: 44.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..457
NoneNo IPR availablePANTHERPTHR12628:SF10POLYCOMB PROTEIN PCLcoord: 1..677
NoneNo IPR availablePANTHERPTHR12628POLYCOMB-LIKE TRANSCRIPTION FACTORcoord: 1..677
NoneNo IPR availableCDDcd15504PHD_PRHA_likecoord: 239..291
e-value: 3.06952E-31
score: 113.684
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 239..294
e-value: 5.1E-11
score: 42.3
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 237..294
score: 10.3533
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 240..291
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 230..297
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 492..554

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0011029Sed0011029gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0011029.4-exonSed0011029.4-exon-LG12:32352782..32353108exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32353473..32353649exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32353907..32353957exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32354266..32354355exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32354454..32354678exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32355722..32356063exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32356194..32356306exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32356395..32356518exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32357058..32357223exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32357828..32358451exon
Sed0011029.4-exonSed0011029.4-exon-LG12:32359278..32359795exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0011029.4-three_prime_utrSed0011029.4-three_prime_utr-LG12:32352782..32352829three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0011029.4-cdsSed0011029.4-cds-LG12:32352830..32353108CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32353473..32353649CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32353907..32353957CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32354266..32354355CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32354454..32354678CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32355722..32356063CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32356194..32356306CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32356395..32356518CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32357058..32357223CDS
Sed0011029.4-cdsSed0011029.4-cds-LG12:32357828..32358372CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0011029.4-five_prime_utrSed0011029.4-five_prime_utr-LG12:32358373..32358451five_prime_UTR
Sed0011029.4-five_prime_utrSed0011029.4-five_prime_utr-LG12:32359278..32359795five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0011029.4Sed0011029.4-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0046872 metal ion binding