Sed0010948.1 (mRNA) Chayote v1

Overview


Name	Sed0010948.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG11: 24704972 .. 24708225 (+)
Sequence length	309
RNA-Seq Expression	Sed0010948.1
Synteny	Sed0010948.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACCTATGGGAAACAAGAAGAACCCGCTCTAGCGACACACATTGGAGGAGAAACAACTGCGGCTGGGCTATGCGGAGGTGACGACAACGTTGGAGAAGCACCGCGAACTCGAGCTGCAAAGATTGACTGCATAGGATAGGTGGACTATGAGCCTTGAACCTTCCCTTGTGAAAGTATATTTACTCTACTTACTAACTAGTAGACGCGATGTCCTTGAACTATTCTGCCATTTATGTAAACGATGATATACCCCACACAAATATCGCACTAACACGGTTTGTTTGGTTCTCATGGTTATGTCCATTCTGGTCATGAACATCTCCTAGTTCTGCGAGATCTTTAGACAACTATGCCTCAATAGTTTCCTTTGAAGCGACCCCATTTCTCTTTCACATAGGTGATTTATGTTGTTCAGTTCACTGTTACACACATACAATCATTAAAAGCATATCTAGATTAATGTGGTTTATCCTTACACACATGTGATCTTTGTAGCTTAACCTTTTTCTCGTTTTTATTATTTTTTACATCATAGGAATGGACTGGGAGTAAACCCCCACAATGACAACGACAAGGTCCATGTAAGTAGGTTGTCCCTTTGAACCTAGATCTTGGGATCTCCAGTCAACTAGGTTAGGTTGTCCTTTACATAATGTCTTTTAATCTCATGGGCTTTAGTCTCATTCCTTTTGATGTTTTATCAACTTAATCTTGATTCAAAGCTTTAGTAAGCGGATCCGCAATGTTATCTTTTGATCTCACAAAATCAGCAGAGATAACTCTATATGAGATCAGTTGTCTAATAGTATTATGTCGACGGCGCATGTGTCTCGACTTGCCGTTATACATCATGTTTCGTGCTCTTCCAATCGTTGCTTGATTATCACAATATGTATTATTGTGGGCACACGTTTAGGCCATTCTAGAATATCCTCTAAAAAATTTTGAAGCCATTCAGCTTCTTCTATAGCTTTATCCAAAGCTACAAACTCAGATTCCATGGTCGATCTGGTTATGATTGTTTGTCTCGGGGATTTCTAGAACACAGCTCCACCTCCGAAGGTGAACACATATCCACTTGTGCCTTTGGAATCTTGGATGTCAGAAATCCAACTAGCATTTGAGAATCCTTCTAAAGTAGTAGGATCTCTAGAATAGTGCAGTCCATAATCCTGAGTATATAGCAGATATCATAGTCCATAATCTCTTCTTAGATCTTCTCTTCATTCTCTTAGTCCCAAGTTCACTCTAGTTTGGAGACTTCTTTTGTAGAGTAAGTCATTCTCCTCTATCAGCTAAGTTTGTTCAAAACATTTTGTCCATGGCTTATTTATTCTGGGTACCTCTGAGTAAATGTTTTGCTTGCCGCTAAAACGGTTTTGTAGTAGTGCTAGCAGAATACTTGGATCACCACTACTCATTTACTCGTTTTTCCGTTTCTTTTACCAAGAATATCTTGAGGGTTTTTTATTTTGTATTTTTTGAAAACATCATAAGCATTCACATATTTCGTTTGTAACACAATACTAATTAGCATTATGACCCACCAACTACGGCTCATCATTGTCCTAAATGATTATGAATTTTAATTCCCCCCAAACTTAAATGTTTATAAGATTATTGAAATCCTTACTTTAAGCTCAAACCATCTCCTCTCATGGAATTGATCTAGGTCCTAAGTTGATGATGTATGCGGAGTTGTGGATCCAACCGAGTTAGGATGTCAAAGATGATGATATCTCGATTTGCTATGTAGTCCACAAGTTTTTTCAAATTGTTCTCTAACAGCCAAAGGTTGCGCCTGAATTTTTCTCTCATTGTCTTCTTCATCTTCCTTGGTGGGAGAGTCGACACATGGACATGTGTAGAAGGTCACGCTTTATTTGGAACCGCTGCATTTACACGACCGAACTCTGCCATGAGGCGCTGGATAACACGGTTACAGTCTTCTCCCAATGGTGTCAATTAAACTTTCTGCCGCCGGGAGTTGCTCGCCTCAGCTTCCACTTTGTTTCTACGTCGGAGCAGGTCCTCCGATGCAAGATTTCCTCTTCTTCCAATACCTCGCTCCTCAACCAACATCGGAGCCTTTTATTCCCGATGCTCTCTGACTTTGTCTTCTTCTTCTACACGAACTGCTGCAACTTCCTCCAAGTCCTCTTGTCGTGGTGCAGAGGTAACAACCCTTTCTTCCCTAGGAACCGTTGAAGATTCCTCTACTGCTGCAATACGTTCTTCCATTCTTCCGGATGGATCATTCACTTGCCTTCGCACGGTTGGTCTGGCTTGTGACTGTCTGTCGTCATTGTGAATGGATGCACTAGCCAACGACTCAGGCTCTTGGTTGGGGTCTTCCCCTTGTTGTTCCGTTCTTATATGCCACATTCTTCGGTAAGTGGTTGCAAGTCTTCGCACCATGGTGAAGGTATGGAAGAACCGTAAGGTAGAAATTGTTGGTTGAAAGAAATGGTTAAATAGCAAATTTCTTGTAGGGTATTTCTGAGTCGAAACTAAGGGTATGACGATCGAGTTGCAAACGTCGTTTATGTCAGGGCAACGATTGGACTTTTGGCGGTCATGCACTCTCTGCATTTTGTTGCCATGCGTCCTTTGAGAATATATTTTCATTGATCTCGGATGTTTGTTTCACGTGGCTTTGCTGAGGCGAACTTGGATTCCTTTGGACATTCTAGAGAGCTTCAACTTTGTTGTGGCGAAGCGTGCATGAGTCATTCCTTTCCTCGCCGCTTTCGCTTAGTCGGAGCTTCCTGCAATAAAATACGAGTATCAATACCTTTTTAAAAAAATATATATTTAACTGAGTTTGACTTGGTTTAACTTAATTTTGCTACATTTAACGTCTAATTCTCTTTTCGACGTCGCCAATATTCTGCTTTTGCTTAATTTAAATCTACAAGAGCGAGCTTTTCTACTTATTTAATTTGTCATTTTCCTTCTTGTAAATATCTTAATTTTGGCTATTTTAACTCTCAATTCTTGAGAGTTATCAAATAGGATGAAGGACCTATGGGAAACAAGAAGAATCTGCTCTAGCGACACACATTGGAGGAGAAACAACTGCGGCTGGGCTATGCGGAGGTGACGGCAACGTTGGAGGAGCACCGCGAACTCGAGCTGAAAAGATTGACTGCGGCGGCGTGACTCGTTGCTGGAGCTTGCTCAGGCTTTCAAGAGCTGCATTGAAGGCGACAACATCGACTCGCGGGACGATGTGGCGGCGTTGCTAG

mRNA sequence

ATGAAGGACCTATGGGAAACAAGAAGAACCCGCTCTAGCGACACACATTGGAGGAGAAACAACTGCGGCTGGGCTATGCGGAGGACCTATGGGAAACAAGAAGAATCTGCTCTAGCGACACACATTGGAGGAGAAACAACTGCGGCTGGGCTATGCGGAGGTGACGGCAACGTTGGAGGAGCACCGCGAACTCGAGCTGAAAAGATTGACTGCGGCGGCGTGACTCGTTGCTGGAGCTTGCTCAGGCTTTCAAGAGCTGCATTGAAGGCGACAACATCGACTCGCGGGACGATGTGGCGGCGTTGCTAG

Coding sequence (CDS)

ATGAAGGACCTATGGGAAACAAGAAGAACCCGCTCTAGCGACACACATTGGAGGAGAAACAACTGCGGCTGGGCTATGCGGAGGACCTATGGGAAACAAGAAGAATCTGCTCTAGCGACACACATTGGAGGAGAAACAACTGCGGCTGGGCTATGCGGAGGTGACGGCAACGTTGGAGGAGCACCGCGAACTCGAGCTGAAAAGATTGACTGCGGCGGCGTGACTCGTTGCTGGAGCTTGCTCAGGCTTTCAAGAGCTGCATTGAAGGCGACAACATCGACTCGCGGGACGATGTGGCGGCGTTGCTAG

Protein sequence

MKDLWETRRTRSSDTHWRRNNCGWAMRRTYGKQEESALATHIGGETTAAGLCGGDGNVGGAPRTRAEKIDCGGVTRCWSLLRLSRAALKATTSTRGTMWRRC

Homology

The following BLAST results are available for this feature:

BLAST of Sed0010948.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0010948.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0010948.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0010948.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0010948	Sed0010948	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010948.1-exon	Sed0010948.1-exon-LG11:24704972..24705054	exon
Sed0010948.1-exon	Sed0010948.1-exon-LG11:24708000..24708225	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010948.1-cds	Sed0010948.1-cds-LG11:24704972..24705054	CDS
Sed0010948.1-cds	Sed0010948.1-cds-LG11:24708000..24708225	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0010948.1	Sed0010948.1-protein	polypeptide