Sed0010620.1 (mRNA) Chayote v1

Overview


Name	Sed0010620.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	dehydration-responsive element-binding protein 2A-like
Location	LG01: 5141012 .. 5144429 (-)
Sequence length	1077
RNA-Seq Expression	Sed0010620.1
Synteny	Sed0010620.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGCAAGAATATTGGAGAGGTGAAATTGGAAGTTGGAGGCGTAGGGTTCCCCGTTCGTCCAGTTTGTTGTCGTCAACGCGACCGTGTGTTGGTGCATGCCTCTCTAGAATCGGAATGTCCGTCCTTTCTTCCACCTCGCAATTTTACTGCCCAACAGGTATTTTCTTTTCTCTTTTTTAAAATTTTTTATTTTTGGCTTCCCTAGAAATTTTTTTTTACAGGATTTCAGATTCTATTTAGCATCTAAATAGGGGATATTTGTTTCTGATTGTGAAATGAAAAAAGTGGGCTTTTTGTTTCTGTTTCGTAAAGTGAAGGACTTTGAACTGTATGCATTGTTTGTGTTGCTGAATCTTGGGGTTCACCTAAAGGGTTATGTAAATTCGGTTTTGAGTTGGAAAAAGATGGAAAAAAATCAAATGGGGTTTTCACTTTGCAACTGTGGATAGAGATGTCCACGGGACAAGATGACTTTATCGTCTCCATTCATGTTACTCTTTTTAATCCCATCCCCCGAAATTCACAGTTAAAATTCTGCAGAGAAATTTGTGGGGATTGAGATCAGTCAATAATTCCCCATCCATTTTTAAGTAGATACTATATTTATTAATTAGCAATACTTAGGTAAGGACGAGGATGAGTGAGTATTCCTTAGAGTCACATATGTTTACTTTTTTTAAAAAATTGACTTTGATTGATGGATAGAAAAATTAAAGTAGGAAGAGAAATGCAAAAAAATAAAAATATGTGATTTTAAGGTAAAATACTTACCCACCCTTACTAAGTATTGCTCTTTACCCTTTCCAAGGGGTGACACAGTGATTGAAGACTTGGGCTTTAAGGGTATGCTTTTCTCAAGGCCCCAGGTTCGAGACTCAGCTGTGACATTACTCCTTCGATGTCTCCAGGTGCTTGGCCTAGAGACGGGCATGATTACTCTTGTTTCAAAAAAAAGTATTGCTCTTTACTAATTGCTTTTAAAGAAATGTTAAAAAAAAAATTGCTTTTAAAGAAAACCAGATCCAAACTAATTGTTTAAATTTCAAAAATTATAAAAACTAAAAATAAAAGGGTTATCCAACCGGTCTTAACTACTCAAAAACAACTTTTTATTTTTATTACTAAAAATAATTCCTCATTTTTTAATAAGTCATTTCTAATTATTTATTTCAAACTACTAAAAAAATCTTATCATTTTTACCTATTCATTTTTAATAATTCATTTTTAATAATTATTTTTTAATTATTAATTTCAAATTCATATCTAAACGATCTATCTTTTCTAATTCCTCTAAAAAAAAAGAGCTATATTCAATCGAGCTTTTTGTTGCAACTTTTAATTATAGATGTGTGTTTTTCTTAAACTAGTTTTTGAGAACTTGGGGGACTTTATAGTTGTGTGTGCTTGGCTTAGAGATATTATAACTGGGACTGAGCTTAGAGAAAGTATACACGAAGCTCCAGTTCTCTTTGTAGCAAACATGAATATTGTATAGTAGGGAAAAGGGTAACAGTTTAATTTTGTTTTGTTCTTTTTTGGAATTAGCAATAGCTTAGGCAGAGTGTATGCCTTAAGTGCTAAAGTTGCAGTCTACAGAAATTATTTTAGGAATGACTGTAGAGTACACTAACGTGTGAAGAATTTGAACGAAGATATGTTTCTCATCAAAAAAAAAATTCATTGGTTGATTATAAATTGGTGAAGCAAGTTAGAGTATAATCCCCATGGTTTTAAAAGCTAGCTGCTATAATTGGCGAATTAAGTTCGTGGATGTAACTATTTAAATGTAAAAGGTGTGATATTTTTGTGAAATCAATTACTTAACCCACACCGTTAATATTGACACATGAGTAGTTAACATTCGCATGTTTAATTTGCCAACAACTACAAATGACACGAGCTATTTTTTTAGGTTTGATAAAAGGAATGAATTCTAGTTTTTAAAACCACCGGGACTGAATAATAACTTTCTGTTCACTACAGGGACTACATTCTAACATTTATAATTTAGCCTTTATTTATTTATGAATATTGTTAATATTTTACAACATAAGGGTGTCACCACATGATGAGATTGATAGTGTTATATTTTCTATGAGCATTGGGTGGCAGACATGCCCTTTCTTCTTATTAGGCACGAAAGATGGAGATTCTTTGGGTACACAGATATAGCACGAGTAGTTACAAGCTAGTGAATACTTGAAATTGAGTAGTTACAAGCTAGTGAATACTTGAAATTTGAGTTATTCTCGTAGTATTACTCATATATATCAAGCTGGTAATGGTACTTGAGCCCAAGAACGACCGTGTTCTTGGGCCGTCGTAGAAACACAAATCATGTTGACGATGGAATGAACAATAAAAACTTTATGAAAGCTTTTCCCTACACGTTCTGATGAACATATGGCCTAAAGAACTCTCTGTGCACAGAGGTTACTTTATTTGTGATTTTATTGTTTATAGTATGAAAATTGAAATCGTCTTGTTATGGTGACAGGCCTTTTGTGATCTTTCTGATTTGTTCAGTCCAATCTAAACATTTCCTGGATGCCTAAATTAGAAAAATTACAAACAAGACGGCCTGGATCTGCATCCGTGGTAGAGACTCTTGAAAAATGGAAAGATTACAATGATCACCTTGATACATGTAATGGAGCGGCCAGCACCCGTAAAGTGCCAGCGAAGGGATCAAAGAAGGGCTGCATGAAGGGCAAGGGTGGGCCAGAGAATTTGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCGGAAATTCGCGCACCGAATAGGGGAAGTCGGCTCTGGTTAGGTACATTTCCAACTGCCATTGATGCTGCTCTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTCAGCTCGCCTCAATTTTCCCAATATCTCAATTCCAACATTACTAAAAGAAAAAGAATCATCAACAAAGGATTCTCCTGAAATCAAGAGGTCTTCAATCTCTTCTCTAGGGTCAACTTCACTAAGTCTGAGTTCCGAGTCCACAATAACGTCCGATCACTCTGAGGACTGTGCTGCTGAAGAAGTTGTCTAGCCAGCTTTGATCTTTGACCATTGTAAAGTTTATGAAGGGTGAATGGAGGTCAGGAATCAATTTTTCGGACAATTAATATGATTGCCCTTCTGTGTGCAAGTTGTAACTTTTTTTCTTGTTGTTTGTCATAAGTACAAGTAGGCTTAGGAAGATTTGAACTAGGGATGAAAAACTAAATCACTAGAACTCTTCTAATTAACCTTTCTTCCTGTGAGGTTGATATGTGTGCCTGATTTGATATCCGATGCTAGGATCGTGTTACGTGTCGAATGATCTGTATAAATGCTTGGTGTTTAATTTGTTTGAATGGTTGATATTTCAGTACTAAA

mRNA sequence

AAAAAAGCAAGAATATTGGAGAGGTGAAATTGGAAGTTGGAGGCGTAGGGTTCCCCGTTCGTCCAGTTTGTTGTCGTCAACGCGACCGTGTGTTGGTGCATGCCTCTCTAGAATCGGAATGTCCGTCCTTTCTTCCACCTCGCAATTTTACTGCCCAACAGGCCTTTTGTGATCTTTCTGATTTGTTCAGTCCAATCTAAACATTTCCTGGATGCCTAAATTAGAAAAATTACAAACAAGACGGCCTGGATCTGCATCCGTGGTAGAGACTCTTGAAAAATGGAAAGATTACAATGATCACCTTGATACATGTAATGGAGCGGCCAGCACCCGTAAAGTGCCAGCGAAGGGATCAAAGAAGGGCTGCATGAAGGGCAAGGGTGGGCCAGAGAATTTGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCGGAAATTCGCGCACCGAATAGGGGAAGTCGGCTCTGGTTAGGTACATTTCCAACTGCCATTGATGCTGCTCTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTCAGCTCGCCTCAATTTTCCCAATATCTCAATTCCAACATTACTAAAAGAAAAAGAATCATCAACAAAGGATTCTCCTGAAATCAAGAGGTCTTCAATCTCTTCTCTAGGGTCAACTTCACTAAGTCTGAGTTCCGAGTCCACAATAACGTCCGATCACTCTGAGGACTGTGCTGCTGAAGAAGTTGTCTAGCCAGCTTTGATCTTTGACCATTGTAAAGTTTATGAAGGGTGAATGGAGGTCAGGAATCAATTTTTCGGACAATTAATATGATTGCCCTTCTGTGTGCAAGTTGTAACTTTTTTTCTTGTTGTTTGTCATAAGTACAAGTAGGCTTAGGAAGATTTGAACTAGGGATGAAAAACTAAATCACTAGAACTCTTCTAATTAACCTTTCTTCCTGTGAGGTTGATATGTGTGCCTGATTTGATATCCGATGCTAGGATCGTGTTACGTGTCGAATGATCTGTATAAATGCTTGGTGTTTAATTTGTTTGAATGGTTGATATTTCAGTACTAAA

Coding sequence (CDS)

ATGCCTAAATTAGAAAAATTACAAACAAGACGGCCTGGATCTGCATCCGTGGTAGAGACTCTTGAAAAATGGAAAGATTACAATGATCACCTTGATACATGTAATGGAGCGGCCAGCACCCGTAAAGTGCCAGCGAAGGGATCAAAGAAGGGCTGCATGAAGGGCAAGGGTGGGCCAGAGAATTTGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCGGAAATTCGCGCACCGAATAGGGGAAGTCGGCTCTGGTTAGGTACATTTCCAACTGCCATTGATGCTGCTCTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTCAGCTCGCCTCAATTTTCCCAATATCTCAATTCCAACATTACTAAAAGAAAAAGAATCATCAACAAAGGATTCTCCTGAAATCAAGAGGTCTTCAATCTCTTCTCTAGGGTCAACTTCACTAAGTCTGAGTTCCGAGTCCACAATAACGTCCGATCACTCTGAGGACTGTGCTGCTGAAGAAGTTGTCTAG

Protein sequence

MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAASTRKVPAKGSKKGCMKGKGGPENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFPNISIPTLLKEKESSTKDSPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEEVV

Homology

[Close]

BLAST of Sed0010620.1 vs. NCBI nr
Match: XP_038900306.1 (putative dehydration-responsive element-binding protein 2H [Benincasa hispida])

HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83
Identity = 162/178 (91.01%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+CN  A   R+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLARRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGT ARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120

Query: 121 NFPNISIPTLLKEKESSTKDSPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEEV 178
           NFPNISIPTLLKEKESSTKDSPEIKRSSIS LGSTSLSLSSESTITSDHSEDCA E++
Sbjct: 121 NFPNISIPTLLKEKESSTKDSPEIKRSSISFLGSTSLSLSSESTITSDHSEDCAVEDI 178

[Close]

BLAST of Sed0010620.1 vs. NCBI nr
Match: XP_022140755.1 (putative dehydration-responsive element-binding protein 2H [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-82
Identity = 160/178 (89.89%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQ RRPGS+SV ETL KWKDYNDHLD+CN     TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQARRPGSSSVAETLAKWKDYNDHLDSCNDETKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFP+AI+AALAYDEAARAMYGT ARL
Sbjct: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIEAALAYDEAARAMYGTMARL 120

Query: 121 NFPNISIPTLLKEKESSTKDSPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEEV 178
           NFPNISIPTLLKEKES+TKDSPEIKR SISSLGSTSLSLSSESTITSDHSEDCA E+V
Sbjct: 121 NFPNISIPTLLKEKESATKDSPEIKRPSISSLGSTSLSLSSESTITSDHSEDCAVEDV 178

[Close]

BLAST of Sed0010620.1 vs. NCBI nr
Match: XP_023513197.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pepo] >XP_023513198.1 dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 5.3e-79
Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+CN  A  TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120

Query: 121 NFPNISIPTLLKEKES-STKD--SPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEE 178
           NFPNISIPTLLKEKES  TK+  SPEIKRSSISSLGSTSLSLS ESTITSDHSE+ AAE+
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180

[Close]

BLAST of Sed0010620.1 vs. NCBI nr
Match: XP_022986391.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita maxima] >XP_022986392.1 dehydration-responsive element-binding protein 2A-like [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 6.9e-79
Identity = 160/181 (88.40%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+CN  A  TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120

Query: 121 NFPNISIPTLLKEKES-STKD--SPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEE 178
           NFPNISIPTLLKEKES  TK+  SPEIKRSS+SSLGSTSLSLS ESTITSDHSE+ AAE+
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSVSSLGSTSLSLSYESTITSDHSEEGAAED 180

[Close]

BLAST of Sed0010620.1 vs. NCBI nr
Match: XP_022944614.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita moschata] >XP_022944615.1 dehydration-responsive element-binding protein 2A-like [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.6e-78
Identity = 160/181 (88.40%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+C   A  TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120

Query: 121 NFPNISIPTLLKEKES-STKD--SPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEE 178
           NFPNISIPTLLKEKES  TK+  SPEIKRSSISSLGSTSLSLS ESTITSDHSE+ AAE+
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180

[Close]

BLAST of Sed0010620.1 vs. ExPASy Swiss-Prot
Match: O82132 (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=3702 GN=DREB2A PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-40
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 11  RPGSASVVETLEKWKDYNDHLDTCNGAASTRKVPAKGSKKGCMKGKGGPENLRCNYRGVR 70
           R    +V E L++WK+YN+ ++    +   RKVPAKGSKKGCMKGKGGPEN RC++RGVR
Sbjct: 26  RGDGTTVAERLKRWKEYNETVEEV--STKKRKVPAKGSKKGCMKGKGGPENSRCSFRGVR 85

Query: 71  QRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFPN---ISIP 130
           QR WGKWVAEIR PNRGSRLWLGTFPTA +AA AYDEAA+AMYG  ARLNFP      + 
Sbjct: 86  QRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSDASEVT 145

Query: 131 TLLKEKESSTKDSP 142
           +   + E  T ++P
Sbjct: 146 STSSQSEVCTVETP 157

[Close]

BLAST of Sed0010620.1 vs. ExPASy Swiss-Prot
Match: A2WL19 (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica OX=39946 GN=DREB2A PE=3 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-39
Identity = 87/151 (57.62%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 3   KLEKLQTRR--PGSASVVETLEKWKDYNDHLDTCNGAASTRKVPAKGSKKGCMKGKGGPE 62
           ++ K +TRR   G  S+ ET++ WK+ N  L   N   S+RK PAKGSKKGCM GKGGPE
Sbjct: 14  QVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQEEN---SSRKAPAKGSKKGCMAGKGGPE 73

Query: 63  NLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLN 122
           N  C YRGVRQRTWGKWVAEIR PNRG RLWLG+FPTA++AA AYDEAARAMYG +AR+N
Sbjct: 74  NSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVN 133

Query: 123 FPN---------ISIPTLLKEKESSTKDSPE 143
           F +          S P+L+     +T  S E
Sbjct: 134 FADNSTDANSGCTSAPSLMMSNGPATIPSDE 161

[Close]

BLAST of Sed0010620.1 vs. ExPASy Swiss-Prot
Match: Q0JQF7 (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2A PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-39
Identity = 87/151 (57.62%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 3   KLEKLQTRR--PGSASVVETLEKWKDYNDHLDTCNGAASTRKVPAKGSKKGCMKGKGGPE 62
           ++ K +TRR   G  S+ ET++ WK+ N  L   N   S+RK PAKGSKKGCM GKGGPE
Sbjct: 14  QVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQEEN---SSRKAPAKGSKKGCMAGKGGPE 73

Query: 63  NLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLN 122
           N  C YRGVRQRTWGKWVAEIR PNRG RLWLG+FPTA++AA AYDEAARAMYG +AR+N
Sbjct: 74  NSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVN 133

Query: 123 FPN---------ISIPTLLKEKESSTKDSPE 143
           F +          S P+L+     +T  S E
Sbjct: 134 FADNSTDANSGCTSAPSLMMSNGPATIPSDE 161

[Close]

BLAST of Sed0010620.1 vs. ExPASy Swiss-Prot
Match: Q5W6R4 (Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2B PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 80/127 (62.99%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 1   MPKLEKLQTRRP-----GSASVVETLEKWKDYNDHLD-TCNGAASTRKVPAKGSKKGCMK 60
           MP ++  + +RP     G  SV ET+++W + N+  +    G    RK PAKGSKKGCMK
Sbjct: 18  MPPVQPGRKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARKAPAKGSKKGCMK 77

Query: 61  GKGGPENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYG 120
           GKGGPEN RC++RGVRQRTWGKWVAEIR PN+ SRLWLGTFPTA  AA AYDEAARAMYG
Sbjct: 78  GKGGPENTRCDFRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAMYG 137

Query: 121 TSARLNF 122
             AR NF
Sbjct: 138 PMARTNF 144

[Close]

BLAST of Sed0010620.1 vs. ExPASy Swiss-Prot
Match: O82133 (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana OX=3702 GN=DREB2B PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-38
Identity = 79/124 (63.71%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 2   PKLEKLQTRRPGSASVVETLEKWKDYNDHLDTC---NGAASTRKVPAKGSKKGCMKGKGG 61
           PK  K +  R G  +V + L+KWK+YN+ ++      G    RKVPAKGSKKGCMKGKGG
Sbjct: 12  PKKRKSRA-RAGGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71

Query: 62  PENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSAR 121
           P+N  C++RGVRQR WGKWVAEIR P  G+RLWLGTFPTA  AA AYDEAA AMYG+ AR
Sbjct: 72  PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131

Query: 122 LNFP 123
           LNFP
Sbjct: 132 LNFP 134

[Close]

BLAST of Sed0010620.1 vs. ExPASy TrEMBL
Match: A0A6J1CG18 (putative dehydration-responsive element-binding protein 2H OS=Momordica charantia OX=3673 GN=LOC111011341 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.0e-83
Identity = 160/178 (89.89%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQ RRPGS+SV ETL KWKDYNDHLD+CN     TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQARRPGSSSVAETLAKWKDYNDHLDSCNDETKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFP+AI+AALAYDEAARAMYGT ARL
Sbjct: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIEAALAYDEAARAMYGTMARL 120

Query: 121 NFPNISIPTLLKEKESSTKDSPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEEV 178
           NFPNISIPTLLKEKES+TKDSPEIKR SISSLGSTSLSLSSESTITSDHSEDCA E+V
Sbjct: 121 NFPNISIPTLLKEKESATKDSPEIKRPSISSLGSTSLSLSSESTITSDHSEDCAVEDV 178

[Close]

BLAST of Sed0010620.1 vs. ExPASy TrEMBL
Match: A0A6J1J7E7 (dehydration-responsive element-binding protein 2A-like OS=Cucurbita maxima OX=3661 GN=LOC111484140 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.4e-79
Identity = 160/181 (88.40%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+CN  A  TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120

Query: 121 NFPNISIPTLLKEKES-STKD--SPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEE 178
           NFPNISIPTLLKEKES  TK+  SPEIKRSS+SSLGSTSLSLS ESTITSDHSE+ AAE+
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSVSSLGSTSLSLSYESTITSDHSEEGAAED 180

[Close]

BLAST of Sed0010620.1 vs. ExPASy TrEMBL
Match: A0A6J1FYS1 (dehydration-responsive element-binding protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC111449020 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 160/181 (88.40%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+C   A  TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEAKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120

Query: 121 NFPNISIPTLLKEKES-STKD--SPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEE 178
           NFPNISIPTLLKEKES  TK+  SPEIKRSSISSLGSTSLSLS ESTITSDHSE+ AAE+
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTITSDHSEEGAAED 180

[Close]

BLAST of Sed0010620.1 vs. ExPASy TrEMBL
Match: A0A5A7UGY1 (Putative dehydration-responsive element-binding protein 2H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00390 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.8e-78
Identity = 155/179 (86.59%), Postives = 161/179 (89.94%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKL KLQTR PGS SV ETL KWKDYNDHLD+C   A   R+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLGKLQTRLPGSLSVAETLAKWKDYNDHLDSCTDEAKLARRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYG  ARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGNLARL 120

Query: 121 NFPNISIPTLLKEKESSTKDSP-EIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEEV 178
           NFPN+SIPTLLKEKE STKDSP EIKRSS+S LGSTSLSLSSESTITSDHSEDCA E+V
Sbjct: 121 NFPNVSIPTLLKEKELSTKDSPDEIKRSSLSFLGSTSLSLSSESTITSDHSEDCAVEDV 179

[Close]

BLAST of Sed0010620.1 vs. ExPASy TrEMBL
Match: A0A0A0KB02 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G124180 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 154/179 (86.03%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYNDHLDTCNGAAS-TRKVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGS SV ETL KWKDYNDHLD+C      TR+VPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
           EN+RCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGT ARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120

Query: 121 NFPNISIPTLLKEKESSTKDS-PEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEEV 178
           NFPN+SIPTLLK KE S KDS  EIKR S+S LGSTSLSLSSESTITSD SEDCA E+V
Sbjct: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 179

[Close]

BLAST of Sed0010620.1 vs. TAIR 10
Match: AT5G05410.1 (DRE-binding protein 2A )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 11  RPGSASVVETLEKWKDYNDHLDTCNGAASTRKVPAKGSKKGCMKGKGGPENLRCNYRGVR 70
           R    +V E L++WK+YN+ ++    +   RKVPAKGSKKGCMKGKGGPEN RC++RGVR
Sbjct: 26  RGDGTTVAERLKRWKEYNETVEEV--STKKRKVPAKGSKKGCMKGKGGPENSRCSFRGVR 85

Query: 71  QRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFPN---ISIP 130
           QR WGKWVAEIR PNRGSRLWLGTFPTA +AA AYDEAA+AMYG  ARLNFP      + 
Sbjct: 86  QRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSDASEVT 145

Query: 131 TLLKEKESSTKDSP 142
           +   + E  T ++P
Sbjct: 146 STSSQSEVCTVETP 157

[Close]

BLAST of Sed0010620.1 vs. TAIR 10
Match: AT5G05410.2 (DRE-binding protein 2A )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 0


Query: 11  RPGSASVVETLEKWKDYNDHLDTCNGAASTRKVPAKGSKKGCMKGKGGPENLRCNYRGVR 70
           R    +V E L++WK+YN+ ++    +   RKVPAKGSKKGCMKGKGGPEN RC++RGVR
Sbjct: 26  RGDGTTVAERLKRWKEYNETVEEV--STKKRKVPAKGSKKGCMKGKGGPENSRCSFRGVR 85

Query: 71  QRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFPN---ISIP 130
           QR WGKWVAEIR PNRGSRLWLGTFPTA +AA AYDEAA+AMYG  ARLNFP      + 
Sbjct: 86  QRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRSDASEVT 145

Query: 131 TLLKEKESSTKDSP 142
           +   + E  T ++P
Sbjct: 146 STSSQSEVCTVETP 157

[Close]

BLAST of Sed0010620.1 vs. TAIR 10
Match: AT3G11020.1 (DRE/CRT-binding protein 2B )

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 79/124 (63.71%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 2   PKLEKLQTRRPGSASVVETLEKWKDYNDHLDTC---NGAASTRKVPAKGSKKGCMKGKGG 61
           PK  K +  R G  +V + L+KWK+YN+ ++      G    RKVPAKGSKKGCMKGKGG
Sbjct: 12  PKKRKSRA-RAGGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71

Query: 62  PENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSAR 121
           P+N  C++RGVRQR WGKWVAEIR P  G+RLWLGTFPTA  AA AYDEAA AMYG+ AR
Sbjct: 72  PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131

Query: 122 LNFP 123
           LNFP
Sbjct: 132 LNFP 134

[Close]

BLAST of Sed0010620.1 vs. TAIR 10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-37
Identity = 85/169 (50.30%), Postives = 109/169 (64.50%), Query Frame = 0


Query: 13  GSASVVETLEKWKDYNDHL--DTC---NGAASTRKVPAKGSKKGCMKGKGGPENLRCNYR 72
           G+  V E L +W++YN+ +  ++C    G  S RK P KGS+KGCMKGKGGPEN  C+YR
Sbjct: 14  GTRDVAEILRQWREYNEQIEAESCIDGGGPKSIRKPPPKGSRKGCMKGKGGPENGICDYR 73

Query: 73  GVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARLNFPNISIP 132
           GVRQR WGKWVAEIR P+ G+RLWLGTF ++ +AALAYDEAA+A+YG SARLN P I+  
Sbjct: 74  GVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEIT-- 133

Query: 133 TLLKEKESSTKDSPEIKRSSISSLGSTSLSLSSESTITSDHSEDCAAEE 177
                + SST               + + ++S   T  SD SE CA E+
Sbjct: 134 ----NRSSST---------------AATATVSGSVTAFSDESEVCARED 161

[Close]

BLAST of Sed0010620.1 vs. TAIR 10
Match: AT2G40350.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 1   MPKLEKLQTRRPGSASVVETLEKWKDYND--HLDTC---NGAASTRKVPAKGSKKGCMKG 60
           MP+  K +    G+  V E L KW++YN+    D+C    G+   RK P K S+KGCMKG
Sbjct: 1   MPRKRKSR----GTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRKAPPKRSRKGCMKG 60

Query: 61  KGGPENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGT 120
           KGGPEN  C+Y GVRQRTWGKWVAEIR P RG++LWLGTF ++ +AALAYDEA++A+YG 
Sbjct: 61  KGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQ 120

Query: 121 SARLNFP 123
           SARLN P
Sbjct: 121 SARLNLP 123

The following BLAST results are available for this feature:

BLAST of Sed0010620.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900306.1	1.2e-83	91.01	putative dehydration-responsive element-binding protein 2H [Benincasa hispida]	[more]
XP_022140755.1	1.0e-82	89.89	putative dehydration-responsive element-binding protein 2H [Momordica charantia]	[more]
XP_023513197.1	5.3e-79	88.95	dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pe...	[more]
XP_022986391.1	6.9e-79	88.40	dehydration-responsive element-binding protein 2A-like [Cucurbita maxima] >XP_02...	[more]
XP_022944614.1	2.6e-78	88.40	dehydration-responsive element-binding protein 2A-like [Cucurbita moschata] >XP_...	[more]

BLAST of Sed0010620.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82132	2.3e-40	61.19	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=370...	[more]
A2WL19	3.3e-39	57.62	Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica ...	[more]
Q0JQF7	3.3e-39	57.62	Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonic...	[more]
Q5W6R4	1.2e-38	62.99	Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonic...	[more]
O82133	2.8e-38	63.71	Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Sed0010620.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG18	5.0e-83	89.89	putative dehydration-responsive element-binding protein 2H OS=Momordica charanti...	[more]
A0A6J1J7E7	3.4e-79	88.40	dehydration-responsive element-binding protein 2A-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1FYS1	1.3e-78	88.40	dehydration-responsive element-binding protein 2A-like OS=Cucurbita moschata OX=...	[more]
A0A5A7UGY1	4.8e-78	86.59	Putative dehydration-responsive element-binding protein 2H OS=Cucumis melo var. ...	[more]
A0A0A0KB02	1.2e-76	86.03	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G124180 PE=...	[more]

BLAST of Sed0010620.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05410.1	1.6e-41	61.19	DRE-binding protein 2A	[more]
AT5G05410.2	1.6e-41	61.19	DRE-binding protein 2A	[more]
AT3G11020.1	2.0e-39	63.71	DRE/CRT-binding protein 2B	[more]
AT2G40340.1	1.8e-37	50.30	Integrase-type DNA-binding superfamily protein	[more]
AT2G40350.1	1.2e-36	58.27	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 88..104 score: 62.46 coord: 66..77 score: 72.58
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 65..128 e-value: 1.2E-36 score: 137.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 64..114 e-value: 4.4E-14 score: 52.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 65..122 score: 21.7726
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 64..123 e-value: 1.30573E-31 score: 106.587
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 65..124 e-value: 3.0E-26 score: 93.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..178
None	No IPR available	PANTHER	PTHR31241:SF62	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 6..167
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 6..167
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 65..122

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0010620	Sed0010620	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010620.1-exon	Sed0010620.1-exon-LG01:5141012..5141927	exon
Sed0010620.1-exon	Sed0010620.1-exon-LG01:5144269..5144429	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010620.1-three_prime_utr	Sed0010620.1-three_prime_utr-LG01:5141012..5141340	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010620.1-cds	Sed0010620.1-cds-LG01:5141341..5141877	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010620.1-five_prime_utr	Sed0010620.1-five_prime_utr-LG01:5141878..5141927	five_prime_UTR
Sed0010620.1-five_prime_utr	Sed0010620.1-five_prime_utr-LG01:5144269..5144429	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0010620.1	Sed0010620.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity