Sed0010600.1 (mRNA) Chayote v1

Overview


Name	Sed0010600.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	tetratricopeptide repeat protein 1
Location	LG11: 4602592 .. 4609047 (-)
Sequence length	1283
RNA-Seq Expression	Sed0010600.1
Synteny	Sed0010600.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACATTGCAAGAACACGAGTATCTTCTCTTCTCTCCCTAAACCCCAGAGTCTCATAAATCAAAATCGTTTCAAATCTCTTCTGAAGATTCTGTAGATTCGTCGAACAATAATGGTTCGTATAGAAATCGAGGAAACTGAGAACGAAGTTCCAAATCCTTCAAAGGAAACGACCAAAAAGACGACGGATTCAAGTGGCGGTGCCGCAACATCGAATTCAAGCAAAGACCCTTCCGATGGCTACGAGACCGCCAGCGATGGCGAGCTCGGTGATATCGGCGATGAGAATTCTGATCGTGATCGACAGCCGGAAGACGAGGAGCAAATTGTAATGCCCACTGAAGATGAGATTCAAGAGGTTTTTCCACATTTTGAGTTTGTTTAGTGCTGTTTTTCTTTTTTGGCGATTTTTTTTTTTTTTTTTTTTGCTTTCTGCTATCTGTGTTATTGGTGTTGACGTTGATTATTATACTTTTCTTACTCCGGTATCCATTTTAACTTTGACGTAGTTTGTCTATTTATTTATTTTTCCCCGTTATGATGTTCAAGGCTAGGGTAATTTACTCTGCTGGAGAGGTTTGTTCTTTACAGAAATGTTTCAATGCGATTTATGAATGCTTGAAAATGAATAGCATTCATATGGATTTGATCATGATAAAGGGGAAGTTGGTATTAGATGATGTAGGGTTCCATCTTAAAACTAAACTAATTGGATGAGAGGAGTAGCCACATTTCTAACTAAGGTGGCGAGGATTTCTCATCTTTCCAATATGTGGGACAAGGTTAACTTGGGCTCATTCTATACATCCATTCAAAGATTATAGTTTTTCTACTTTACTTTCACATTGGCAAAGCTTTTTGTGAACATGCTATAGATGACCTTTTTGTAATTTTCATTCATCAATGAAAGTTTCATTTCCTATAAAAAAAAAAATAAATAAAAAAATAAATAAATATATATAATGTGTGTGTGTGTGGGACAAGGTAAGGATCTCAGCATGTTCAAGATGGCATCTGGTTGGGTTTACCATCTTGGGTTGGATCCTAATTGATAGATAGAGTACCCGCTTGGCGGCTTGGGTTGGATCCAAATTTTTGGATCAAATATCTGCTTGGGCTGGATTCAAATTTGTGAACCAAATACCCACTTGGAACTTTGATATCATAATAGACGATGAGGTTTCATCTTGAAACCAATTGGCAATAGGATGAGTAGTCCACCTTTCTTCTAAAGGTTGTGAGAACTCCTCACCTTTTAATGTGGGACAAGATGAGGATCTCCAACGTGATTTTTTGTTTTTGCATGTGATGAGAAAAACTTATTTAAAAGAACTTCAGATTGTTGTAAATTTTAAGCTATGGATAAAATTTGATGGAGAAGGGAACTGTTGAAAGCTTGTGATTTGTTTGGGATCTTGATTTTCCCAATTTGGTTGTGACATAATTCTTTTATAGCCGTTTTAGATTTTTTTTTATCTTTCTTTCACTTCTAATTATGGGAATCAGGTCTCTTTTGTCTAGTAATAAGTTATTTGGTAAATGGTTATCTAAACTGTTAAAATCCATGTTTCAAAAGGCTATTGAGGCTTACACCTTGAGGCTCTAACTTAAGCCTCGAGTCTTACGCCTCTGTTGGATCATAAGAGGTTTACGCCTCACACAAGAGAGGCTTATGCCTCGATGATAACGCATTGAGGCTTAAAATTCCTACGCCTCTTAGGATAACTAGAAGAATAGTATTAATATTTTCCATTCTTATAATATAAGAGTTTGAACCATAATAATATAGATTTTCTCTTATGGATTCTTTTGTTAGAAAGACACAATTATTTAAGAATTGTCAATTTTGATCATTTGTTGGCTTATTTTCCTCTAGCATCTCTTTTTGGAGTTCTTTGTTGTATTCGTTATAGGTGTTTGGAGAATTCACTTATATTTCATTCATCAAGGAAATTTTTTTCCAAAAAACCTCAATCCTATTAGAGTTGTTGTTATGTAAATGTTTTATGTATTTTTACGTAAATATTATGTTTTAACATACATGTTTACACAAATTTAGAATTTTTATAATATTTTTAATTAAAATTGAGACTTACGCCTCATACCGCCTCGAGATTTACGCCTCGCCTCTGCAAGAGAAAAAGCCTCGAGGCCACCTTTAGTCTTTTAAAACATTGGTTAAAGCTTTACTTATCAATGAAATATTCGTCCCTTATATGGTTTACGATTTTCTTGGTCCATTTTTTCTTGTGTTTGTATGAATCTAAAATCTATTACATTTCTTGCAGAAAGCCTTGGATGAAGCAAATAATGCAAAGTTGGCTGGAAATAAACTGTTTGGTGTAGGGAAATATGAGGAGGCTATATCAGAGTATGATCGTGGTTTAAACATTGCTCCGGACATGCCTTCTTCAGTGGAGTTACGGTCCATATGCCATGCAAACCGTGGCGTGTGTTTTCTGAAACTAGTATGTCTTTTCATGACCCTTAATTGAAAAGAACTGCAGTGTGTTTTCTCATTTAGATATTTATCTCTATTCTTTCTGGTGCATTATAGTCATATATTAATGTATTTGCAAATGTCATTAGAGGGTTACTTGTCAGATGTTTGTAATCTATGTGATCTTTATTTCTTCGTAGATGCTTTTATTAGTCCAAACTCCCAAACAATCATGGGTGAATTTTCAAAGGAGAGAAGATTTTGTCCACCAAGCGGGACAAAGTGCGACCCCTAAGCAATTGGAGGTTCTCGCTTATCTCTTGGGGGTTGGCCGAGTGGTCAATTAGGGACTTAGGAATCATAAAGTGGAGGGAATGAGTTCAATTCTTGGTGTTCACCTACTAGGAATTAGGTTTTGACAACTTTTCTTGACAACCAAATGTAATAGGGTCACACAATTTTTTCTCTTAGATTAGTCGACGTGTATGTAAGTTGGCTTAAAGACTCACGAATGTCAAAAAAAAAAGAATCCCGTTTTTGTACATCTTGTGGCTACTATAAGTGGCTTTTCTAATCACCAACCCATCAACCCAAGAAGACAACGATGAAAATTCATCTTCTTAAATTTAGAAACTGTTGAATTATGTAAAACCACCAATCAATCCAAAAGCCTAAGATGATGGATTGAGGCAGATTTAATTATATCAACCAACATTTCCCCTCACTTGTGGATTTTGAAATTTGAGAAATGCCCTACAAGTGGAATTTAATTTTAATTAGGGACACATGACCTCCTGCTCTGATACCATGTTGAATTATGTTAAACCACCAATCAATCCAAAAGCCTAAGCTAATGGATTGGGGCAACAGAAACATATGTGATTTTGTGAATTCCTTGATTCATTTGGGGATATGACCTTGATGTTGTTTTCATAAATGACTTAACATAAACAGATTTCTATCCTTTTCCCTGTATTATTAAATTGGAAACTAAAGCATGTTGTAAATGACATAAAAGTCAATCATTATGGAGTGACCTAGTGGTCAAGAGTGTCATAACGTAACTATGAAGTGATGAGTTGAATCCATAATATTCACCTACCTAGGAAATAATTTCTTATGAATGTCCTTGACAACCAAATGTTTGTAGAACGGTATGTTAAAGTAAAAAAATTGAAATCACATCTTCAGCTGATGGATTAATGCCTAGTCCTTTGGTTAGAAAGGAATTGATTTTTTTTTTTCTTTGAGATGGATAGGAGCTATCTAGGACACTGTTAGTTGCTGCTTCCTTGTTTTGAACAAGAAACAATACTTTCATTGAAATTATGGAAATAGACAATTAATTCTAGGACTCAGTTAGCTCTTGGGGAGGCGATGGGCAAATATTTTTATAATTACTCTCTGGTTTTTGCATGGGAAGGTTTTTTATAACCTTTTGCCTAATTTCATGTAGAAGCCTCTTCTACCCTCGCATTAATGATTTTGTTATATTAGTTTCTTTCCTTTAAGAAATGAATGTATAATAAAGTCACGAGGATTATCTTCTTTCTTTTTATATCCGTGAGTGTCCGAGCCAGCTTATGCCACCTCGATTATTCTCACGGGAGACACTGTTTGACACTTTGACCTTACAATATTTGAATGTCAAGGAAACCCATAACAAATTAATGCCTAGGTAGGTGGCCATTATAAATTTTACTTATTACCTAATAGTGTCCCAAGGTTCTCCTGACTACTATACGAAGAGGGTGGGATGCTAATTATGATCCTTCACATGCCTGGAATTTCTCGTTTACATTTTTTTTTTTTCGAGTGACGTCTTTTGCATTTCAGACTCTAAATATCATGCATGTATATTTCAACTTTTTAGAGTATGCATCTGAGTTTTTCTGTTTGTGCATGGACTTGTAGGATTTGTTTTGCTATATAATTAAGTTTATTGTCCTGCTTGATAGATTGAGCTTACCTTACTACAAATGGCACATTTTTTCATTAGACATACTATGTTGGTGTTCTATTAACTGTTGGATAAGTTTCAATACAATCATAGTTGTAGCCCTTATCCTCCTTTGGTGGTTTACAATCCTCACTTCATTGTAGTTGATGGAGTAGTCAAATTTTGTAAATACCAGATGGCCCTTGACCTAGCATTCTTTGGTTTCATTTGTTGTTACTGCAAAAAGTTGTTTTCTGATTTTAATTTATTTGCTAAACATTAGCTTGATCGCTTCCCAAGATGAATTGAGATTAGAACTTTCTTGTGAGGTCTTGCTTTAATTCCACATCTTTTTCCTTCTCATCAGCCGGATTATGTATGTTTGCATCATGTATTAATTATCCCTAACATAATGTTTTTAAGGAAAAATATGACGAAACAATCAAAGCATGCTCTAAGGCAATTGAACTGAATCCTGCATATATCAAAGCATTGTCTAGAAGAGCAGAGGCTCATGAAAAGCTTGAACACTTTGAGGAAGCTATGAATGGTAAACTTTGCTTTCATTATATTGCTGTTATAAGGCCAATCTTTTTTTTTTTTGGATAAGAAACAATTTCATTATAAATATGAAATTAAAGGCAAGAAGCCAATTACAAAAGAGATCTCTTCAATAGCGCGTCATATAAGGCCTTTTCTTTTACATCTTTCCAAAATGTTCTTGAAAACTTGTCTTGTTAACTTCCCTTTCTCAATCTTTATCAACACATGGGATCATATATTATTCCATTTACTTGCAGATTTGAAAAACATACTGGAGTTGGATACATCAAATGACCAAGCTAGGAAGACCATCCGTCGCCTCGAACCACTTGCGGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATCGGTAAGTCTTATATTGTTTAGAAGCTGTTTTTTGGTATCATATTTCATATTTCTTTGTTTTAGATACTTTTTCCCTCTCCTGCTAGTGCAAATTTAGTTCTTTCACGGAGAAAAAACAGTGGCGGAGTAAAAAAGGTTTCTATTAGGAGGGAAAAGTTTTACCTTTGAACTTTTTATGTATATAGTAGTTCGAGAAAAAGCATTAAAATCGTAGTTATTTTATGCATATAGTTTTACATTTTTAACTTTTTACCTAAATAGCTCGAGAAGACATTAGAATCGTTGTTCTTTTAGTTTTATGTATATAGTTTTAGCTTCTAATTTTAAGATTAAACTTTAAAATCATCTTCGAAGAATTTCAAGACATGCTTCTTTGGGGAGGTATCAGGTTCAAGCTCCACGAGTGAACTTAATTGTAAAATCACTTATTTTCTCTTGGGTTAGGGTCTTAGATGGGTGCGGTGGGTGCATGGGGTATAGTGTAGCAAAACTCCGATTTCTTCCTTAAAAAAAGATAAAAACGTTAGGATCGAAGCACTTTTATGCATATATTTTTTGCAACTACCTCCTTGCTCTCTTTCTTGGCTCTGCCAGTGAGTGACATGAATATATTATTGTTCGGTTTTCTGAACTCGATTTTTCTATCATCTGTTTGAGCAGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGAATGAGCGTGGACAACTTCAAGGCTGTTAAAGACCCAAATACCGGTTCCTATTCAATTTCATTCCAAAAATAGTTTGGTTTTACTCCATTTGTATAAAATAGGTACATCATATATGTGCTTGGCATTGTGTTACCTCCTGGGTTAGTTCAATGACTATAACTGATGAAAGTGTTTAAATTTTGGGTTGCTGCTGTGTTTCCTGTGGTGGTGCTTTATTTAATATTTTTTTTCTTATAACCTGGGAATTTGGAGTCTCGCTCCTCTAAACTTGGGGCCCCTCTCTAAGCCAGGTTCGAGACGGTGGTAATATTTTTTGTTGTTATGTTCTCCATTTTAGTTCTTATACTGAGATTTGTTGTTCTACTTTGAAAATAAGAAGTTTGGTTCTCTATTAAGCTTACCTTTGGGTGGCTTATTTGTTAGATAAGTTATTGAGATTTGGTGTGAGATGGCAGCTTGGAC

mRNA sequence

AACATTGCAAGAACACGAGTATCTTCTCTTCTCTCCCTAAACCCCAGAGTCTCATAAATCAAAATCGTTTCAAATCTCTTCTGAAGATTCTGTAGATTCGTCGAACAATAATGGTTCGTATAGAAATCGAGGAAACTGAGAACGAAGTTCCAAATCCTTCAAAGGAAACGACCAAAAAGACGACGGATTCAAGTGGCGGTGCCGCAACATCGAATTCAAGCAAAGACCCTTCCGATGGCTACGAGACCGCCAGCGATGGCGAGCTCGGTGATATCGGCGATGAGAATTCTGATCGTGATCGACAGCCGGAAGACGAGGAGCAAATTGTAATGCCCACTGAAGATGAGATTCAAGAGAAAGCCTTGGATGAAGCAAATAATGCAAAGTTGGCTGGAAATAAACTGTTTGGTGTAGGGAAATATGAGGAGGCTATATCAGAGTATGATCGTGGTTTAAACATTGCTCCGGACATGCCTTCTTCAGTGGAGTTACGGTCCATATGCCATGCAAACCGTGGCGTGTGTTTTCTGAAACTAGAAAAATATGACGAAACAATCAAAGCATGCTCTAAGGCAATTGAACTGAATCCTGCATATATCAAAGCATTGTCTAGAAGAGCAGAGGCTCATGAAAAGCTTGAACACTTTGAGGAAGCTATGAATGATTTGAAAAACATACTGGAGTTGGATACATCAAATGACCAAGCTAGGAAGACCATCCGTCGCCTCGAACCACTTGCGGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATCGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGAATGAGCGTGGACAACTTCAAGGCTGTTAAAGACCCAAATACCGGTTCCTATTCAATTTCATTCCAAAAATAGTTTGGTTTTACTCCATTTGTATAAAATAGGTACATCATATATGTGCTTGGCATTGTGTTACCTCCTGGGTTAGTTCAATGACTATAACTGATGAAAGTGTTTAAATTTTGGGTTGCTGCTGTGTTTCCTGTGGTGGTGCTTTATTTAATATTTTTTTTCTTATAACCTGGGAATTTGGAGTCTCGCTCCTCTAAACTTGGGGCCCCTCTCTAAGCCAGGTTCGAGACGGTGGTAATATTTTTTGTTGTTATGTTCTCCATTTTAGTTCTTATACTGAGATTTGTTGTTCTACTTTGAAAATAAGAAGTTTGGTTCTCTATTAAGCTTACCTTTGGGTGGCTTATTTGTTAGATAAGTTATTGAGATTTGGTGTGAGATGGCAGCTTGGAC

Coding sequence (CDS)

ATGGTTCGTATAGAAATCGAGGAAACTGAGAACGAAGTTCCAAATCCTTCAAAGGAAACGACCAAAAAGACGACGGATTCAAGTGGCGGTGCCGCAACATCGAATTCAAGCAAAGACCCTTCCGATGGCTACGAGACCGCCAGCGATGGCGAGCTCGGTGATATCGGCGATGAGAATTCTGATCGTGATCGACAGCCGGAAGACGAGGAGCAAATTGTAATGCCCACTGAAGATGAGATTCAAGAGAAAGCCTTGGATGAAGCAAATAATGCAAAGTTGGCTGGAAATAAACTGTTTGGTGTAGGGAAATATGAGGAGGCTATATCAGAGTATGATCGTGGTTTAAACATTGCTCCGGACATGCCTTCTTCAGTGGAGTTACGGTCCATATGCCATGCAAACCGTGGCGTGTGTTTTCTGAAACTAGAAAAATATGACGAAACAATCAAAGCATGCTCTAAGGCAATTGAACTGAATCCTGCATATATCAAAGCATTGTCTAGAAGAGCAGAGGCTCATGAAAAGCTTGAACACTTTGAGGAAGCTATGAATGATTTGAAAAACATACTGGAGTTGGATACATCAAATGACCAAGCTAGGAAGACCATCCGTCGCCTCGAACCACTTGCGGAACAAAAACGAGAAAAGATGAAAGAAGAGATGATCGGAAAGTTGAAAGACATGGGCAATTCTTTGTTGGGTCGTTTTGGAATGAGCGTGGACAACTTCAAGGCTGTTAAAGACCCAAATACCGGTTCCTATTCAATTTCATTCCAAAAATAG

Protein sequence

MVRIEIEETENEVPNPSKETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDENSDRDRQPEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQK

Homology

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BLAST of Sed0010600.1 vs. NCBI nr
Match: XP_038889502.1 (tetratricopeptide repeat protein 1 [Benincasa hispida])

HSP 1 Score: 404.8 bits (1039), Expect = 5.5e-109
Identity = 218/263 (82.89%), Postives = 237/263 (90.11%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE ++EVP P K   + KKTTDSS G +TSN+SKDPSDGYETASDGELGD  DE
Sbjct: 1   MVRIEMEEPQDEVPIPPKASASAKKTTDSSSGPSTSNASKDPSDGYETASDGELGDSSDE 60

Query: 61  NSDR-DRQPEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           + +  D+  E EE+I   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  HQEHLDQHSEQEERIATLSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAILEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+VELRSICHANRGVCFLKLEKYD+TIKACSKAIELNPAY+KALSRR EAHEKLE
Sbjct: 121 APDMPSAVELRSICHANRGVCFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA+ND+K ILELD+SNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAINDMKKILELDSSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQR 263

[Close]

BLAST of Sed0010600.1 vs. NCBI nr
Match: XP_023522143.1 (tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_023547337.1 tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 217/263 (82.51%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE+E+EVP+P K   +T+KT DSSG  +TS++SK+PSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTMDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  NSDRDRQ-PEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           N     Q PE EEQI   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIMEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+VELRSICHANRGVCFLKLEKYDETIKACSKAIE+NPAY+KALSRR EAHEKLE
Sbjct: 121 APDMPSAVELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA++D+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. NCBI nr
Match: KAG7030071.1 (Tetratricopeptide repeat protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 215/263 (81.75%), Postives = 239/263 (90.87%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE+E+EVP+P K   +T+KTTDSSGG +T+++SK+PSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGGPSTASASKEPSDGYETASDGELGDSGDE 60

Query: 61  NSDRDRQ-PEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           N     Q P+ EEQI   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  NQQHPEQHPKHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           +PDMPS+ ELRSICHANRGVCFLKLEKYDETIKACSKAIE+NPAY+KALSRR EAHEKLE
Sbjct: 121 SPDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA++D+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. NCBI nr
Match: XP_022999753.1 (tetratricopeptide repeat protein 1 [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 2.7e-108
Identity = 216/263 (82.13%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE+E+EVP+P K   +T+KTTDSSG  +TS++S++PSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDE 60

Query: 61  NSDRDRQ-PEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           N     Q PE EEQI   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+ ELRSICHANRGVCFLKLEKYDETIKACSKAIE+NPAY+KALSRR EAHEKLE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA++D+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. NCBI nr
Match: XP_022946519.1 (tetratricopeptide repeat protein 1 [Cucurbita moschata])

HSP 1 Score: 402.1 bits (1032), Expect = 3.6e-108
Identity = 216/263 (82.13%), Postives = 237/263 (90.11%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE+E+EVP+P K   +T+KTTDSSG  +TS++SK+PSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  NSDRDRQ-PEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           N     Q PE EEQI   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+ ELRSICHANRGVCFLKLEKYDETIKACSKAIE+NPAY+KALSRR EAHE LE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA++D+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. ExPASy Swiss-Prot
Match: Q99614 (Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 59  NSDRDRQPEDEEQIV---MPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGL 118
           N D +    DEE ++       DE ++K  +E+   K  GN+ F  G Y EA S Y R L
Sbjct: 84  NEDVNSSELDEEYLIELEKNMSDEEKQKRREESTRLKEEGNEQFKKGDYIEAESSYSRAL 143

Query: 119 NIAPDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEK 178
            + P      + RSI  +NR    +K +K +  I  CSKAI+LNP+YI+A+ RRAE +EK
Sbjct: 144 EMCPS--CFQKERSILFSNRAAARMKQDKKEMAINDCSKAIQLNPSYIRAILRRAELYEK 203

Query: 179 LEHFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGR 238
            +  +EA+ D K+ILE D S  QAR+   RL    E++ E++KEEM+GKLKD+GN +L  
Sbjct: 204 TDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLGNLVLRP 263

Query: 239 FGMSVDNFKAVKDPNTGSYSISF 259
           FG+S +NF+  +D +TGSYSI+F
Sbjct: 264 FGLSTENFQIKQDSSTGSYSINF 284

[Close]

BLAST of Sed0010600.1 vs. ExPASy Swiss-Prot
Match: Q3ZBR5 (Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-33
Identity = 93/225 (41.33%), Postives = 135/225 (60.00%), Query Frame = 0


Query: 39  DPSDGYETASDGELGDIGDENSDRDRQPED-EEQIVMPTE----DEIQEKALDEANNAKL 98
           D S  +ET   G   D  +   + D  P + +E+ +M  E    DE +++  +E++  K 
Sbjct: 64  DASASFETEEPG--ADKLENKPEDDMNPSELDEEYLMELEKNMPDEEKKRRREESSRLKE 123

Query: 99  AGNKLFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVCFLKLEKYDETIKACS 158
            GN+ F  G Y EA S Y R L   P      + RS+  +NR    +K EK +  I  CS
Sbjct: 124 EGNEQFKKGDYIEAESSYTRALQTCPS--CFQKDRSVLFSNRAAARMKQEKKEMAISDCS 183

Query: 159 KAIELNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQK 218
           KAI+LNP+YI+A+ RRAE +EK +  +EA+ D K+ILE D S  QAR+   RL    E++
Sbjct: 184 KAIQLNPSYIRAILRRAELYEKTDKLDEALEDYKSILEKDPSVHQAREACMRLPKQIEER 243

Query: 219 REKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISF 259
            E++KEEM+GKLKD+GN +L  FG+S +NF+  +D +TGSYSI+F
Sbjct: 244 NERLKEEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 284

[Close]

BLAST of Sed0010600.1 vs. ExPASy Swiss-Prot
Match: Q91Z38 (Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-33
Identity = 87/208 (41.83%), Postives = 127/208 (61.06%), Query Frame = 0


Query: 56  GDENSDRDRQPEDEEQIV-----MPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISE 115
           G + SD      DEE ++     MP E+  ++K  +E+   K  GN+ F  G Y EA S 
Sbjct: 81  GSKASDDSSSELDEEYLIELEKNMPEEE--KQKRREESAKLKEEGNERFKRGDYMEAESS 140

Query: 116 YDRGLNIAPDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRA 175
           Y + L + P      + RS+  +NR    +K +K +  I  CSKAI+LNP YI+A+ RRA
Sbjct: 141 YSQALQMCP--ACFQKDRSVLFSNRAAARMKQDKKETAITDCSKAIQLNPTYIRAILRRA 200

Query: 176 EAHEKLEHFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGN 235
           E +EK +  +EA+ D K++LE D S  QAR+   RL    E++ E++KEEM+GKLKD+GN
Sbjct: 201 ELYEKTDKLDEALEDYKSVLEKDPSVHQAREACMRLPKQIEERNERLKEEMLGKLKDLGN 260

Query: 236 SLLGRFGMSVDNFKAVKDPNTGSYSISF 259
            +L  FG+S +NF+  +D +TGSYSI+F
Sbjct: 261 LVLRPFGLSTENFQIKQDSSTGSYSINF 284

[Close]

BLAST of Sed0010600.1 vs. ExPASy Swiss-Prot
Match: Q9CZW5 (Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 6.7e-17
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 0


Query: 78  DEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGV 137
           D ++  +LD A  AK  GNK F  GKYE+AI  Y   +++ P    +V+L S  + NR  
Sbjct: 107 DSLEMSSLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCP-TEKNVDL-STFYQNRAA 166

Query: 138 CFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELD-TSN 197
            F +L+K+ E  + C+KA+ELNP Y+KAL RRA+AHEKL++ +E + D+  +  L+   N
Sbjct: 167 AFEQLQKWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGFQN 226

Query: 198 DQARKTIRRLEPLAEQKREKMK 219
           +Q+     ++  L  ++  K K
Sbjct: 227 EQSMLLADKVLKLLGKENAKEK 246

[Close]

BLAST of Sed0010600.1 vs. ExPASy Swiss-Prot
Match: O94826 (Mitochondrial import receptor subunit TOM70 OS=Homo sapiens OX=9606 GN=TOMM70 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16
Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 0


Query: 84  ALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVCFLKLE 143
           +LD A  AK  GNK F  GKYE+AI  Y   +++ P    +V+L S  + NR   F +L+
Sbjct: 110 SLDRAQAAKNKGNKYFKAGKYEQAIQCYTEAISLCP-TEKNVDL-STFYQNRAAAFEQLQ 169

Query: 144 KYDETIKACSKAIELNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELDTSNDQ----- 203
           K+ E  + C+KA+ELNP Y+KAL RRA+AHEKL++ +E + D+  +  L+   +Q     
Sbjct: 170 KWKEVAQDCTKAVELNPKYVKALFRRAKAHEKLDNKKECLEDVTAVCILEGFQNQQSMLL 229

Query: 204 ARKTIRRLEPLAEQKREKMKEEMI 223
           A K ++ L     +++ K +E ++
Sbjct: 230 ADKVLKLLGKEKAKEKYKNREPLM 251

[Close]

BLAST of Sed0010600.1 vs. ExPASy TrEMBL
Match: A0A6J1KKL8 (tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108
Identity = 216/263 (82.13%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE+E+EVP+P K   +T+KTTDSSG  +TS++S++PSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASQEPSDGYETASDGELGDSGDE 60

Query: 61  NSDRDRQ-PEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           N     Q PE EEQI   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+ ELRSICHANRGVCFLKLEKYDETIKACSKAIE+NPAY+KALSRR EAHEKLE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA++D+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. ExPASy TrEMBL
Match: A0A6J1G423 (tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.7e-108
Identity = 216/263 (82.13%), Postives = 237/263 (90.11%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE+E+EVP+P K   +T+KTTDSSG  +TS++SK+PSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEESEDEVPSPPKASASTQKTTDSSGVPSTSSASKEPSDGYETASDGELGDSGDE 60

Query: 61  NSDRDRQ-PEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           N     Q PE EEQI   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAI EYDR LNI
Sbjct: 61  NQQHPEQHPEHEEQIAALSEDEIKEKALAEANNAKLAGNKLFGEGKYEEAIVEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+ ELRSICHANRGVCFLKLEKYDETIKACSKAIE+NPAY+KALSRR EAHE LE
Sbjct: 121 APDMPSAAELRSICHANRGVCFLKLEKYDETIKACSKAIEINPAYVKALSRRGEAHENLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA++D+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAIHDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. ExPASy TrEMBL
Match: A0A6J1I3A3 (tetratricopeptide repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468619 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.6e-108
Identity = 213/263 (80.99%), Postives = 236/263 (89.73%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EETE+EVP+P K   +TK  TDSSGGA+ SN SKDPSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEETEDEVPSPPKASASTKNATDSSGGASISNVSKDPSDGYETASDGELGDSGDE 60

Query: 61  NSDR-DRQPEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
           + +  D+  E  EQI  P+EDEI+EKALDEANNAK+AGNKLFG GKYEEA+ EYDR LNI
Sbjct: 61  HQENTDQHSEQVEQIATPSEDEIKEKALDEANNAKIAGNKLFGEGKYEEALLEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APDMPS+VELRSIC ANRG CFLK EKYD+T+KACSKAIELNPAY+KALSRRAEA EKLE
Sbjct: 121 APDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA+ND+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLK+MGNSLLGRFG
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           M+VDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MNVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. ExPASy TrEMBL
Match: A0A5A7TIE6 (Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00140 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.3e-105
Identity = 211/263 (80.23%), Postives = 234/263 (88.97%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNP--SKETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EE ++EVPNP     + K TTDSS G +TSN+SK+PSDGYETASDGELGD  DE
Sbjct: 1   MVRIEMEEHQDEVPNPPNPSASAKTTTDSSSGPSTSNASKNPSDGYETASDGELGDSADE 60

Query: 61  -NSDRDRQPEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
              + D+  E EE+I   +EDEI+EKAL EANNAKLAGNKLFG GKYEEAISEYDR LNI
Sbjct: 61  CQENPDQHSEQEERIATISEDEIKEKALAEANNAKLAGNKLFGEGKYEEAISEYDRALNI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           APD+P +VEL+SIC+ANRG CFLKLEKYD+TIKACSKAIELNPAY+KALSRR EAHEKLE
Sbjct: 121 APDVPVAVELQSICNANRGACFLKLEKYDDTIKACSKAIELNPAYVKALSRRGEAHEKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA+ND+K ILELD+SNDQA+KTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQR 263

[Close]

BLAST of Sed0010600.1 vs. ExPASy TrEMBL
Match: A0A6J1FAT2 (tetratricopeptide repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443960 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.3e-105
Identity = 210/263 (79.85%), Postives = 232/263 (88.21%), Query Frame = 0


Query: 1   MVRIEIEETENEVPNPSK--ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDE 60
           MVRIE+EETE+EVP+P K   + K  TDSSGGA+TSN SKDPSDGYETASDGELGD GDE
Sbjct: 1   MVRIEMEETEDEVPSPPKASASNKNATDSSGGASTSNVSKDPSDGYETASDGELGDSGDE 60

Query: 61  NSDR-DRQPEDEEQIVMPTEDEIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNI 120
             +  D+  E E QI  P+EDEI+EKAL EAN AK+AGNKLFG GKYEEA+ EYDR L I
Sbjct: 61  RQEHTDQHSEQEAQIATPSEDEIKEKALAEANIAKMAGNKLFGEGKYEEALLEYDRALTI 120

Query: 121 APDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLE 180
           +PDMPS+VELRSIC ANRG CFLK EKYD+T+KACSKAIELNPAY+KALSRRAEA EKLE
Sbjct: 121 SPDMPSAVELRSICQANRGACFLKQEKYDDTVKACSKAIELNPAYVKALSRRAEAREKLE 180

Query: 181 HFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFG 240
           HFEEA+ND+K ILELD+SNDQA+K IRRLEPLAEQKREKMKEEMIGKLK+MGNSLLGRFG
Sbjct: 181 HFEEAINDMKKILELDSSNDQAKKAIRRLEPLAEQKREKMKEEMIGKLKEMGNSLLGRFG 240

Query: 241 MSVDNFKAVKDPNTGSYSISFQK 261
           MSVDNFKAVKDPNTGSYSISFQ+
Sbjct: 241 MSVDNFKAVKDPNTGSYSISFQQ 263

[Close]

BLAST of Sed0010600.1 vs. TAIR 10
Match: AT4G30480.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-72
Identity = 163/282 (57.80%), Postives = 198/282 (70.21%), Query Frame = 0


Query: 1   MVRIEIEETENEV-----PNPSKETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGD- 60
           MV IE  E+E+E+     P P+  ++ + T+      T     D SDG+ETAS+ E+ D 
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPTE------TKQVDGDDSDGFETASEREISDE 60

Query: 61  IGDENSDRD----------RQPEDEEQIVMPTEDEI-------QEKALDEANNAKLAGNK 120
            G+E+  ++             + EEQI + +E E        +EKAL EAN AK  GNK
Sbjct: 61  EGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNK 120

Query: 121 LFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIE 180
           LF  G YEEA+S+Y   L +  ++P S+ELRSIC+ NRGVCFLKL K +ETIK C+KA+E
Sbjct: 121 LFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALE 180

Query: 181 LNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELDTSNDQARKTIRRLEPLAEQKREKM 240
           LNP Y KAL RRAEAHEKLEHFE+A+ DLK ILELD SNDQARK IRRLEPLA +KREKM
Sbjct: 181 LNPTYNKALVRRAEAHEKLEHFEDAVTDLKKILELDPSNDQARKGIRRLEPLAAEKREKM 240

Query: 241 KEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNTGSYSISFQ 260
           KEE I KLK+MGNS+LGRFGMSVDNFKAVKDPNTGSYS+SFQ
Sbjct: 241 KEEAITKLKEMGNSILGRFGMSVDNFKAVKDPNTGSYSLSFQ 276

[Close]

BLAST of Sed0010600.1 vs. TAIR 10
Match: AT4G30480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-36
Identity = 99/209 (47.37%), Postives = 130/209 (62.20%), Query Frame = 0


Query: 1   MVRIEIEETENEV-----PNPSKETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGD- 60
           MV IE  E+E+E+     P P+  ++ + T+      T     D SDG+ETAS+ E+ D 
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPTE------TKQVDGDDSDGFETASEREISDE 60

Query: 61  IGDENSDRD----------RQPEDEEQIVMPTEDEI-------QEKALDEANNAKLAGNK 120
            G+E+  ++             + EEQI + +E E        +EKAL EAN AK  GNK
Sbjct: 61  EGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNK 120

Query: 121 LFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVCFLKLEKYDETIKACSKAIE 180
           LF  G YEEA+S+Y   L +  ++P S+ELRSIC+ NRGVCFLKL K +ETIK C+KA+E
Sbjct: 121 LFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKLGKCEETIKECTKALE 180

Query: 181 LNPAYIKALSRRAEAHEKLEHFEEAMNDL 187
           LNP Y KAL RRAEAHEKLEHFE+A+  L
Sbjct: 181 LNPTYNKALVRRAEAHEKLEHFEDAVTGL 203

[Close]

BLAST of Sed0010600.1 vs. TAIR 10
Match: AT4G30480.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-18
Identity = 68/165 (41.21%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 1   MVRIEIEETENEV-----PNPSKETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGD- 60
           MV IE  E+E+E+     P P+  ++ + T+      T     D SDG+ETAS+ E+ D 
Sbjct: 1   MVLIESSESEDEILIKNEPKPASSSSPQPTE------TKQVDGDDSDGFETASEREISDE 60

Query: 61  IGDENSDRD----------RQPEDEEQIVMPTEDEI-------QEKALDEANNAKLAGNK 120
            G+E+  ++             + EEQI + +E E        +EKAL EAN AK  GNK
Sbjct: 61  EGEEDGTKNDAVTSQEEPQHSEKKEEQIELMSEGEAIVDDGSNKEKALAEANEAKAEGNK 120

Query: 121 LFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVCFLKL 143
           LF  G YEEA+S+Y   L +  ++P S+ELRSIC+ NRGVCFLKL
Sbjct: 121 LFVNGLYEEALSKYAFALELVQELPESIELRSICYLNRGVCFLKL 159

[Close]

BLAST of Sed0010600.1 vs. TAIR 10
Match: AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.2e-10
Identity = 62/233 (26.61%), Postives = 109/233 (46.78%), Query Frame = 0


Query: 19  ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDENSDRDRQPEDEEQIVMPTED 78
           E + K  D       +NSS   S+ +  +  G+        S RD            +  
Sbjct: 27  ELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKYDFAKKYRSIRDL-----------SSS 86

Query: 79  EIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVC 138
            I E  LD +++ K  GN+ F   K+ EAI  Y R + ++P+        ++ +ANR + 
Sbjct: 87  LIGESLLD-SSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPN--------AVTYANRAMA 146

Query: 139 FLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELDTSNDQ 198
           +LK+++Y E    C++A+ L+  YIKA SRRA A ++L   +EA  D +  L L+  + +
Sbjct: 147 YLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQE 206

Query: 199 ARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNT 252
            +K    ++ L E   +++ E+  G ++     LL   G+     K ++ P T
Sbjct: 207 LKKQYADIKSLLE---KEIIEKATGAMQSTAQELLKTSGLD----KKIQKPKT 232

[Close]

BLAST of Sed0010600.1 vs. TAIR 10
Match: AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.2e-10
Identity = 62/233 (26.61%), Postives = 109/233 (46.78%), Query Frame = 0


Query: 19  ETTKKTTDSSGGAATSNSSKDPSDGYETASDGELGDIGDENSDRDRQPEDEEQIVMPTED 78
           E + K  D       +NSS   S+ +  +  G+        S RD            +  
Sbjct: 27  ELSLKDKDKKIKQQPANSSNPSSETFRPSGSGKYDFAKKYRSIRDL-----------SSS 86

Query: 79  EIQEKALDEANNAKLAGNKLFGVGKYEEAISEYDRGLNIAPDMPSSVELRSICHANRGVC 138
            I E  LD +++ K  GN+ F   K+ EAI  Y R + ++P+        ++ +ANR + 
Sbjct: 87  LIGESLLD-SSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPN--------AVTYANRAMA 146

Query: 139 FLKLEKYDETIKACSKAIELNPAYIKALSRRAEAHEKLEHFEEAMNDLKNILELDTSNDQ 198
           +LK+++Y E    C++A+ L+  YIKA SRRA A ++L   +EA  D +  L L+  + +
Sbjct: 147 YLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALRLEPESQE 206

Query: 199 ARKTIRRLEPLAEQKREKMKEEMIGKLKDMGNSLLGRFGMSVDNFKAVKDPNT 252
            +K    ++ L E   +++ E+  G ++     LL   G+     K ++ P T
Sbjct: 207 LKKQYADIKSLLE---KEIIEKATGAMQSTAQELLKTSGLD----KKIQKPKT 232

The following BLAST results are available for this feature:

BLAST of Sed0010600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889502.1	5.5e-109	82.89	tetratricopeptide repeat protein 1 [Benincasa hispida]	[more]
XP_023522143.1	1.2e-108	82.51	tetratricopeptide repeat protein 1-like [Cucurbita pepo subsp. pepo] >XP_0235473...	[more]
KAG7030071.1	1.2e-108	81.75	Tetratricopeptide repeat protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999753.1	2.7e-108	82.13	tetratricopeptide repeat protein 1 [Cucurbita maxima]	[more]
XP_022946519.1	3.6e-108	82.13	tetratricopeptide repeat protein 1 [Cucurbita moschata]	[more]

BLAST of Sed0010600.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99614	1.2e-34	43.35	Tetratricopeptide repeat protein 1 OS=Homo sapiens OX=9606 GN=TTC1 PE=1 SV=1	[more]
Q3ZBR5	1.8e-33	41.33	Tetratricopeptide repeat protein 1 OS=Bos taurus OX=9913 GN=TTC1 PE=2 SV=1	[more]
Q91Z38	3.0e-33	41.83	Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1	[more]
Q9CZW5	6.7e-17	38.03	Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 P...	[more]
O94826	1.1e-16	37.50	Mitochondrial import receptor subunit TOM70 OS=Homo sapiens OX=9606 GN=TOMM70 PE...	[more]

BLAST of Sed0010600.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KKL8	1.3e-108	82.13	tetratricopeptide repeat protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494007 P...	[more]
A0A6J1G423	1.7e-108	82.13	tetratricopeptide repeat protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111450555...	[more]
A0A6J1I3A3	6.6e-108	80.99	tetratricopeptide repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A5A7TIE6	2.3e-105	80.23	Tetratricopeptide repeat protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FAT2	2.3e-105	79.85	tetratricopeptide repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Sed0010600.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30480.2	1.2e-72	57.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.1	2.3e-36	47.37	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30480.3	1.6e-18	41.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G56440.1	6.2e-10	26.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G56440.2	6.2e-10	26.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 169..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..75
None	No IPR available	PANTHER	PTHR46014	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 26..260
None	No IPR available	PANTHER	PTHR46014:SF1	TETRATRICOPEPTIDE REPEAT PROTEIN 1	coord: 26..260
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 129..162 e-value: 7.6E-7 score: 38.7 coord: 88..121 e-value: 49.0 score: 8.9 coord: 163..196 e-value: 0.0027 score: 27.0
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 164..194 e-value: 0.2 score: 12.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 163..196 score: 8.3784
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 88..121 score: 8.8504
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 129..162 score: 9.0274
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 47..224 e-value: 6.3E-42 score: 145.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 82..215
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 131..161 e-value: 2.1E-9 score: 36.8

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0010600	Sed0010600	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010600.1-three_prime_utr	Sed0010600.1-three_prime_utr-LG11:4602592..4602981	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010600.1-exon	Sed0010600.1-exon-LG11:4602592..4603097	exon
Sed0010600.1-exon	Sed0010600.1-exon-LG11:4603757..4603870	exon
Sed0010600.1-exon	Sed0010600.1-exon-LG11:4604121..4604247	exon
Sed0010600.1-exon	Sed0010600.1-exon-LG11:4606582..4606761	exon
Sed0010600.1-exon	Sed0010600.1-exon-LG11:4608692..4609047	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010600.1-cds	Sed0010600.1-cds-LG11:4602982..4603097	CDS
Sed0010600.1-cds	Sed0010600.1-cds-LG11:4603757..4603870	CDS
Sed0010600.1-cds	Sed0010600.1-cds-LG11:4604121..4604247	CDS
Sed0010600.1-cds	Sed0010600.1-cds-LG11:4606582..4606761	CDS
Sed0010600.1-cds	Sed0010600.1-cds-LG11:4608692..4608937	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0010600.1-five_prime_utr	Sed0010600.1-five_prime_utr-LG11:4608938..4609047	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0010600.1	Sed0010600.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity