Sed0009571.1 (mRNA) Chayote v1

Overview


Name	Sed0009571.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	non-specific lipid transfer protein GPI-anchored 1-like
Location	LG06: 42311322 .. 42313946 (+)
Sequence length	927
RNA-Seq Expression	Sed0009571.1
Synteny	Sed0009571.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTAAATCACACAAACATGAAGATAAAGGGAGGTAATTACGGCGTTGTTTTAGCGGTGGCGGTGGTAGCGGTGGTGGTTTTTTTATCGGGTGTGGTGGCAGAGGAGCGGAATCTTAAGGAGGAGTGCAGCAATGACTTCGAGAAACTTGTGAGTTGCTTCGAGTATGCGACGGGGAAGGCGGTCGGGCCGAGTAAGGAGTGCTGCGATTCGATCGAAGGGATAAAGGAGAGGAAGCCAGAGTGTTTGTGTTTCTTCATACAGGAGACGCATAATGGGAACCAGCAGATTAAGAGTTTGGGGATTGAAGAGATTAAGCTTCTTCAGCTTCCTTCTGTTTGTCACTTGAAAAACTCCAGCGTCACCTATTGCCCTAGTAATTCTTTTTTTCCCTCTATCTTTTTGAAATGGTTTGAGAAAAATAAATCGACTTTAGTTTTTATTTTGTTCCTAAATTCATTTTAGTTTTGTTCGTAAAATAGGTAAATTATAAATTTGGTCTCTAAGATAGGTAGAAAGTTACACCTTAGTTCATATAATTTTATAACTAAAATTTAATTAAAAACTTAAAACTTAGGGCCTCATTTTGTTTTTACTTTTTTAAATTTAAACATACACCAACTATCTTATAATTTATTTTTCTTACTTGAATAACTATATTTTACTTATGTTTTTAGAAATCAAATTAAAATTTGGAAACTAAAATAAAATATAGAAAACATCATTTTTGTTTTTAAAATTTGGTTAGCATTTCTATACTTTCTTAACATAAGATAGATATAGGAAAGATGAAACAAGTCGTAGAAAGTTTGAGTAAAAATAAGTTTAAATTTCAAAAATTAAGAACAAAAAAAAGTAAATAGTTATCAAATCATATCTTAGTGTTTTTTATTTTAAAAATTAGAATTTAGTTCATGATTTGGTAAAGTCCAAAATATAAGTTTGGTCCATTTAGAATTAAATACATATAATTTAATTTTTCTTACATAAAACTTTTTTCAAACCCTGTAACTAAGTTTTAGTTTTAATGTATGGATTAAATTATAATTTTATTCAAATATAGAGAATTAAACTCATAATGTATTCCGAAAAATAAGTATAAAAGTGAGTTATTGAGCATTTGAAAGAAAAAGTGAGTTATTGATTATGATAAAAGTATTTAATTTTGAAATTAATAATCAAAACAGCTTAAAATTTGTTGGCCAGCAAATTGATGATAATATATCTAAGTAAAACTTTATAAATTCAAATCTTTATAGCATTCACTATCAAACTAAAAGAAAAGGTTTCATGATAATTTTCTTTAAAAAGTCTTAGAAGTTGTAGTTTTAATACTCTACTATTTTAAGTCAAGGAATGTCAAAATATGTCACAAATTGGACCACACATGGTAGGTGTGAATATTGAATGACTTAAATATTTTTCATATAAATATCAGGCATTTGTATACCACCTACCTGACAACCCTAATTGTCAGTGTATTCAATTTCATTCATAACACTTGGTATATATTGTCTTAAATACAACCTATTGAGATGTTAGAAAATACTACTTTTTGAAATTTAAAAAATTCAAAATACATTTTTTTTTCGAAATTAGAACCTTTCTAGAAAACACATTTTGTTTCATTATTGTCTTTGTGATTTTAAAAAGTTAAAAGTGGCCCAGTGGCCCAACTTAAAGTTTAGTTTATATAATTTAAATTTTTTGAATTTAGTTTTTATGATGTTTAACCTAATATCTAGGATTTGTAAAACCTAAAACATAGTCATTATAGCAAATAGATTGAAGCTCTCTTCTTTTTTTTTTTCTTTTTTTTTTTTTGTAAAACCAAATATCATGAAAGCTCATTTATGAATGATTTGATTTTTTTATTAAATCAGCTACCTAACTTTCGAGTATTTAATCGACAAAATTTTAACTTTCTTCAATTTTGTGAGGCTTAGCTTAGTTGTGGCATACAAGCTCTCTGATTCTAAGAAAAATAATTACGTTATATTTTGAGATGCCTTTAAATACGAGTGATGATATAATTATAAATCTACCATAACTTTAGCGAATTCTTGCTGAGCAGAGCTACTCGGCCTACCAGCAAATTCACCAGATGCTGCAATTTTTAGTAATACCACGTCACGAGCCACAACAACGTCAACAACAACAACAACGAAGACAACCCCGGGGGGCAGTTCGAGTGCTAAGATGGTAGCCAATTTTCCCGGTCTGGTCGCGGTAGCCTTCATCGTCGTTGTCCTTTTCGGTGCTTTCGTTCAGCCGACGACGCCTGAGGGATAGAACGAACATAATGTTCCAACAGCGGTTTTAATGGGAAAGGGTCCTATCGTTTTGTAGTTTTTTATTTAGGGTCTGTTCTGTAGTTTTTTGGTTTAATTTGATTTCAGATAAACTGGAAATTTGACTTTTTTTTTCTTCTTTTAATTCGTTGCTTTGCTGTATTTTGTTCATATGTTAGGACGAAATCTCTAGCTTTTGAATCTCTTGTGTTTTGTGTTTATGAATTTTTTCTTTTCCCGAAACATTCGTGTTTATGACTAATTTGTATTGTAATTCGTTTCTTCTTCTAAGCTCTTGAATAAAATATACTAATAATGCATAACATATTATGAAA

mRNA sequence

CCCTAAATCACACAAACATGAAGATAAAGGGAGGTAATTACGGCGTTGTTTTAGCGGTGGCGGTGGTAGCGGTGGTGGTTTTTTTATCGGGTGTGGTGGCAGAGGAGCGGAATCTTAAGGAGGAGTGCAGCAATGACTTCGAGAAACTTGTGAGTTGCTTCGAGTATGCGACGGGGAAGGCGGTCGGGCCGAGTAAGGAGTGCTGCGATTCGATCGAAGGGATAAAGGAGAGGAAGCCAGAGTGTTTGTGTTTCTTCATACAGGAGACGCATAATGGGAACCAGCAGATTAAGAGTTTGGGGATTGAAGAGATTAAGCTTCTTCAGCTTCCTTCTGTTTGTCACTTGAAAAACTCCAGCGTCACCTATTGCCCTAAGCTACTCGGCCTACCAGCAAATTCACCAGATGCTGCAATTTTTAGTAATACCACGTCACGAGCCACAACAACGTCAACAACAACAACAACGAAGACAACCCCGGGGGGCAGTTCGAGTGCTAAGATGGTAGCCAATTTTCCCGGTCTGGTCGCGGTAGCCTTCATCGTCGTTGTCCTTTTCGGTGCTTTCGTTCAGCCGACGACGCCTGAGGGATAGAACGAACATAATGTTCCAACAGCGGTTTTAATGGGAAAGGGTCCTATCGTTTTGTAGTTTTTTATTTAGGGTCTGTTCTGTAGTTTTTTGGTTTAATTTGATTTCAGATAAACTGGAAATTTGACTTTTTTTTTCTTCTTTTAATTCGTTGCTTTGCTGTATTTTGTTCATATGTTAGGACGAAATCTCTAGCTTTTGAATCTCTTGTGTTTTGTGTTTATGAATTTTTTCTTTTCCCGAAACATTCGTGTTTATGACTAATTTGTATTGTAATTCGTTTCTTCTTCTAAGCTCTTGAATAAAATATACTAATAATGCATAACATATTATGAAA

Coding sequence (CDS)

ATGAAGATAAAGGGAGGTAATTACGGCGTTGTTTTAGCGGTGGCGGTGGTAGCGGTGGTGGTTTTTTTATCGGGTGTGGTGGCAGAGGAGCGGAATCTTAAGGAGGAGTGCAGCAATGACTTCGAGAAACTTGTGAGTTGCTTCGAGTATGCGACGGGGAAGGCGGTCGGGCCGAGTAAGGAGTGCTGCGATTCGATCGAAGGGATAAAGGAGAGGAAGCCAGAGTGTTTGTGTTTCTTCATACAGGAGACGCATAATGGGAACCAGCAGATTAAGAGTTTGGGGATTGAAGAGATTAAGCTTCTTCAGCTTCCTTCTGTTTGTCACTTGAAAAACTCCAGCGTCACCTATTGCCCTAAGCTACTCGGCCTACCAGCAAATTCACCAGATGCTGCAATTTTTAGTAATACCACGTCACGAGCCACAACAACGTCAACAACAACAACAACGAAGACAACCCCGGGGGGCAGTTCGAGTGCTAAGATGGTAGCCAATTTTCCCGGTCTGGTCGCGGTAGCCTTCATCGTCGTTGTCCTTTTCGGTGCTTTCGTTCAGCCGACGACGCCTGAGGGATAG

Protein sequence

MKIKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFPGLVAVAFIVVVLFGAFVQPTTPEG

Homology

[Close]

BLAST of Sed0009571.1 vs. NCBI nr
Match: XP_038891858.1 (non-specific lipid transfer protein GPI-anchored 1 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 7.5e-63
Identity = 133/193 (68.91%), Postives = 153/193 (79.27%), Query Frame = 0


Query: 2   KIKGG--NYGVVLAVAVVAVVVF-LSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGP 61
           K+KGG    G  L VAV  V +    G  AE+ +LKEECS+DFEK+VSCFEYATGKA  P
Sbjct: 3   KMKGGIRKVGAALLVAVAMVCLMGRPGKAAEDDHLKEECSSDFEKVVSCFEYATGKAAAP 62

Query: 62  SKECCDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYC 121
           SKECCDSIEGIKE KP+CLCFFIQ+THNGNQQIKS+GI+EIKLLQLPSVCHLKNSSV+YC
Sbjct: 63  SKECCDSIEGIKESKPKCLCFFIQQTHNGNQQIKSMGIQEIKLLQLPSVCHLKNSSVSYC 122

Query: 122 PKLLGLPANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFPGLVAVAFIVVV 181
           PKLLGLPANSPDAAIFSNTT+ AT  S +TTT+T+P GSS  K+ AN PG +    + V+
Sbjct: 123 PKLLGLPANSPDAAIFSNTTTSATPAS-STTTRTSPDGSSGTKIAANSPGALMAVAMAVI 182

Query: 182 LFGAFVQPTTPEG 192
            F AF+ P T EG
Sbjct: 183 FFTAFLPPITREG 194

[Close]

BLAST of Sed0009571.1 vs. NCBI nr
Match: XP_022956488.1 (non-specific lipid transfer protein GPI-anchored 1-like [Cucurbita moschata] >KAG6601604.1 Non-specific lipid transfer protein GPI-anchored 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032362.1 Non-specific lipid transfer protein GPI-anchored 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.2 bits (635), Expect = 2.8e-62
Identity = 136/191 (71.20%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 3   IKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKEC 62
           +KGGN  VV+ V V+  ++ L+G  AEE NLKEECSNDF+++VSCFE+ATGKA  PSKEC
Sbjct: 1   MKGGNGVVVVVVVVLVGLLCLAG--AEEENLKEECSNDFQQVVSCFEFATGKAAAPSKEC 60

Query: 63  CDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLL 122
           CDSIEGIKERKP+CLCFFIQ+THNGNQQIKS+GI E KLLQLPSVC LKNSSV+YCPKLL
Sbjct: 61  CDSIEGIKERKPKCLCFFIQQTHNGNQQIKSMGILETKLLQLPSVCQLKNSSVSYCPKLL 120

Query: 123 GLPANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFG 182
           GLPANSPDAAIFSN T+ AT  +  TTT+T+PGGSS  +MVAN P GL+AVA + V++F 
Sbjct: 121 GLPANSPDAAIFSNITTPATPAA--TTTRTSPGGSSGTRMVANSPAGLLAVA-VAVIVFT 180

Query: 183 AFVQP-TTPEG 192
           AF+ P TT EG
Sbjct: 181 AFLPPITTYEG 186

[Close]

BLAST of Sed0009571.1 vs. NCBI nr
Match: KAA0034189.1 (non-specific lipid transfer protein GPI-anchored 1 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 131/181 (72.38%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 9   GVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEG 68
           GVVLAV  V ++  +    AEE NLKEECSNDFEK+VSCF YATGKA  P++ECCDSIEG
Sbjct: 5   GVVLAVVAVCLLGRVVPGRAEEENLKEECSNDFEKVVSCFAYATGKAAAPTEECCDSIEG 64

Query: 69  IKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANS 128
           IKE KP+CLCFFIQ+THNGNQQIKSLGI+EIKLLQLPSVCHLKNSSV+YCPKLLGLPANS
Sbjct: 65  IKESKPKCLCFFIQQTHNGNQQIKSLGIQEIKLLQLPSVCHLKNSSVSYCPKLLGLPANS 124

Query: 129 PDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFGAFVQPT 188
           PDAAIFSN TS AT  S  TTT+T+P G++  K VAN P GL+AVA +VV+ F  F+ P 
Sbjct: 125 PDAAIFSNLTSPATPAS-ATTTRTSPDGNAGTKTVANSPVGLMAVAMVVVISFTVFLSPI 184

[Close]

BLAST of Sed0009571.1 vs. NCBI nr
Match: XP_008446028.1 (PREDICTED: non-specific lipid transfer protein GPI-anchored 1 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 2.4e-61
Identity = 131/181 (72.38%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 9   GVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEG 68
           GVVLAV  V ++  +    AEE NLKEECSNDFEK+VSCF YATGKA  P++ECCDSIEG
Sbjct: 12  GVVLAVVAVCLLGRVVPGRAEEENLKEECSNDFEKVVSCFAYATGKAAAPTEECCDSIEG 71

Query: 69  IKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANS 128
           IKE KP+CLCFFIQ+THNGNQQIKSLGI+EIKLLQLPSVCHLKNSSV+YCPKLLGLPANS
Sbjct: 72  IKESKPKCLCFFIQQTHNGNQQIKSLGIQEIKLLQLPSVCHLKNSSVSYCPKLLGLPANS 131

Query: 129 PDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFGAFVQPT 188
           PDAAIFSN TS AT  S  TTT+T+P G++  K VAN P GL+AVA +VV+ F  F+ P 
Sbjct: 132 PDAAIFSNLTSPATPAS-ATTTRTSPDGNAGTKTVANSPVGLMAVAMVVVISFTVFLSPI 191

[Close]

BLAST of Sed0009571.1 vs. NCBI nr
Match: XP_023546548.1 (non-specific lipid transfer protein GPI-anchored 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 3.1e-61
Identity = 137/191 (71.73%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 3   IKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKEC 62
           +KGGN GVV+ V +V ++  L+G  AEE NLKEECSNDF+++VSCFE+ATGKA  PSKEC
Sbjct: 1   MKGGN-GVVVVVVLVGLLC-LAG--AEEENLKEECSNDFQQVVSCFEFATGKAAAPSKEC 60

Query: 63  CDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLL 122
           CDSIEGIKERKP+CLCFFIQ+THNGNQQIKS+GI E KLLQLPSVC LKNSSV+YCPKLL
Sbjct: 61  CDSIEGIKERKPKCLCFFIQQTHNGNQQIKSMGILETKLLQLPSVCQLKNSSVSYCPKLL 120

Query: 123 GLPANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFG 182
           GLPANSPDAAIFSN T+ AT  +  TTT+T+PGGSS  +MVAN P GL+AVA + V+ F 
Sbjct: 121 GLPANSPDAAIFSNITTPATPAA--TTTRTSPGGSSGTRMVANSPAGLLAVA-VAVIFFT 180

Query: 183 AFVQP-TTPEG 192
           AF+ P TT EG
Sbjct: 181 AFLPPITTYEG 184

[Close]

BLAST of Sed0009571.1 vs. ExPASy Swiss-Prot
Match: Q9C7F7 (Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana OX=3702 GN=LTPG1 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-34
Identity = 80/185 (43.24%), Postives = 117/185 (63.24%), Query Frame = 0


Query: 3   IKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKEC 62
           +KG +  +VL    +   +  +   A    L +EC+ DF+K+  C ++ATGKA  PSK+C
Sbjct: 1   MKGLHLHLVLVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKC 60

Query: 63  CDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLL 122
           CD++E IKER P+CLCF IQ+   G Q +K LG++E KL+QLP+ C L N+S+T CPKLL
Sbjct: 61  CDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLL 120

Query: 123 GLPANSPDAAIFSNTTSR-----ATTTSTTTTTKTTPGGSSSAK----MVANFPGLVAVA 179
           G+  +SPDAA+F+N  +      A  +  T  T T  GGS+SAK    +VA    L+AV+
Sbjct: 121 GISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASAKDGHAVVALAVALMAVS 180

[Close]

BLAST of Sed0009571.1 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0


Query: 13  AVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGIKER 72
           A+A++ V + +    A++   KEEC+     + +C  Y  GKA  P+ +CC  ++ +   
Sbjct: 12  AIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINS 71

Query: 73  KPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSPDAA 132
             +CLC  IQE    N     L +     L LPSVCH   + +T CP LL L  NSPDA 
Sbjct: 72  DMKCLCMIIQER---NDPDLGLQVNVSLALALPSVCH-ATADITKCPALLHLDPNSPDAQ 131

Query: 133 IF-------SNTTSRATTT---STTTTTKTTPGGSS 159
           +F       + T S +  T   S  T+  +TPG S+
Sbjct: 132 VFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSA 163

[Close]

BLAST of Sed0009571.1 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.1e-12
Identity = 48/147 (32.65%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 11  VLAVAVVAVVVFLSGVVAEERNL-KEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGI 70
           ++A A+  +VV +    A+++   KEEC+     + +C  Y  G+A  P+ +CC  ++ +
Sbjct: 8   LMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQV 67

Query: 71  KERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSP 130
                +CLC  IQ+    N     L I     L LPSVCH   + VT CP LL L  NSP
Sbjct: 68  LNSNKKCLCVIIQDR---NDPDLGLQINVSLALALPSVCHAA-ADVTKCPALLHLDPNSP 127

Query: 131 DAAIFSNTTSRATTTS-TTTTTKTTPG 156
           DA +F         T   +  T ++PG
Sbjct: 128 DAQVFYQLAKGLNKTGPASAPTGSSPG 150

[Close]

BLAST of Sed0009571.1 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.4e-05
Identity = 40/173 (23.12%), Postives = 80/173 (46.24%), Query Frame = 0


Query: 12  LAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGIKE 71
           + + +V + VF++ + +   + +  C+N    +  C  Y TG +  P+++CC+ +  + +
Sbjct: 3   MEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQ 62

Query: 72  RKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSPDA 131
             P+CLC   Q  + G  Q+  + + + + L LP  C+++   V+ C    G   ++ D+
Sbjct: 63  SSPDCLC---QVLNGGGSQL-GINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDS 122

Query: 132 AIFSNTTSRATTTSTTTTTKTTPGGSSS--AKMVANFPGLVAVAFIVVVLFGA 183
              S  +S     S T       G  SS  + +  +FP    +AF   V + A
Sbjct: 123 PAESPNSSGPGNGSKTVPVGEGDGPPSSDGSSIKFSFP---LIAFFSAVSYMA 168

[Close]

BLAST of Sed0009571.1 vs. ExPASy TrEMBL
Match: A0A6J1GX01 (non-specific lipid transfer protein GPI-anchored 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458210 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62
Identity = 136/191 (71.20%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 3   IKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKEC 62
           +KGGN  VV+ V V+  ++ L+G  AEE NLKEECSNDF+++VSCFE+ATGKA  PSKEC
Sbjct: 1   MKGGNGVVVVVVVVLVGLLCLAG--AEEENLKEECSNDFQQVVSCFEFATGKAAAPSKEC 60

Query: 63  CDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLL 122
           CDSIEGIKERKP+CLCFFIQ+THNGNQQIKS+GI E KLLQLPSVC LKNSSV+YCPKLL
Sbjct: 61  CDSIEGIKERKPKCLCFFIQQTHNGNQQIKSMGILETKLLQLPSVCQLKNSSVSYCPKLL 120

Query: 123 GLPANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFG 182
           GLPANSPDAAIFSN T+ AT  +  TTT+T+PGGSS  +MVAN P GL+AVA + V++F 
Sbjct: 121 GLPANSPDAAIFSNITTPATPAA--TTTRTSPGGSSGTRMVANSPAGLLAVA-VAVIVFT 180

Query: 183 AFVQP-TTPEG 192
           AF+ P TT EG
Sbjct: 181 AFLPPITTYEG 186

[Close]

BLAST of Sed0009571.1 vs. ExPASy TrEMBL
Match: A0A5A7SYJ3 (Non-specific lipid transfer protein GPI-anchored 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001840 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 131/181 (72.38%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 9   GVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEG 68
           GVVLAV  V ++  +    AEE NLKEECSNDFEK+VSCF YATGKA  P++ECCDSIEG
Sbjct: 5   GVVLAVVAVCLLGRVVPGRAEEENLKEECSNDFEKVVSCFAYATGKAAAPTEECCDSIEG 64

Query: 69  IKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANS 128
           IKE KP+CLCFFIQ+THNGNQQIKSLGI+EIKLLQLPSVCHLKNSSV+YCPKLLGLPANS
Sbjct: 65  IKESKPKCLCFFIQQTHNGNQQIKSLGIQEIKLLQLPSVCHLKNSSVSYCPKLLGLPANS 124

Query: 129 PDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFGAFVQPT 188
           PDAAIFSN TS AT  S  TTT+T+P G++  K VAN P GL+AVA +VV+ F  F+ P 
Sbjct: 125 PDAAIFSNLTSPATPAS-ATTTRTSPDGNAGTKTVANSPVGLMAVAMVVVISFTVFLSPI 184

[Close]

BLAST of Sed0009571.1 vs. ExPASy TrEMBL
Match: A0A1S3BER8 (non-specific lipid transfer protein GPI-anchored 1 OS=Cucumis melo OX=3656 GN=LOC103488880 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.2e-61
Identity = 131/181 (72.38%), Postives = 149/181 (82.32%), Query Frame = 0


Query: 9   GVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEG 68
           GVVLAV  V ++  +    AEE NLKEECSNDFEK+VSCF YATGKA  P++ECCDSIEG
Sbjct: 12  GVVLAVVAVCLLGRVVPGRAEEENLKEECSNDFEKVVSCFAYATGKAAAPTEECCDSIEG 71

Query: 69  IKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANS 128
           IKE KP+CLCFFIQ+THNGNQQIKSLGI+EIKLLQLPSVCHLKNSSV+YCPKLLGLPANS
Sbjct: 72  IKESKPKCLCFFIQQTHNGNQQIKSLGIQEIKLLQLPSVCHLKNSSVSYCPKLLGLPANS 131

Query: 129 PDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFGAFVQPT 188
           PDAAIFSN TS AT  S  TTT+T+P G++  K VAN P GL+AVA +VV+ F  F+ P 
Sbjct: 132 PDAAIFSNLTSPATPAS-ATTTRTSPDGNAGTKTVANSPVGLMAVAMVVVISFTVFLSPI 191

[Close]

BLAST of Sed0009571.1 vs. ExPASy TrEMBL
Match: A0A0A0KV96 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589340 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 8.3e-60
Identity = 128/185 (69.19%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 5   GGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCD 64
           G    VVLAV  V ++  +    A+E +LKEECSNDFEK+VSCF YATGKA  P++ECCD
Sbjct: 4   GRKVSVVLAVVAVCLLGRVVPGRAQEDDLKEECSNDFEKVVSCFAYATGKAAAPTEECCD 63

Query: 65  SIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGL 124
           SIE IKE KP+CLCFFIQ+THNGNQQIKSLGI+EIKLLQLPSVCHLKNSSV+YCPKLLGL
Sbjct: 64  SIEDIKESKPKCLCFFIQQTHNGNQQIKSLGIQEIKLLQLPSVCHLKNSSVSYCPKLLGL 123

Query: 125 PANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFGAF 184
           PANSPDAAIFSN+TS AT  S  TTT+T+P G++ +K VAN P GL+ VA +VV+ F AF
Sbjct: 124 PANSPDAAIFSNSTSPATPAS-ATTTRTSPDGNAGSKTVANSPVGLMVVAMVVVISFTAF 183

Query: 185 VQPTT 189
           + P T
Sbjct: 184 LSPIT 187

[Close]

BLAST of Sed0009571.1 vs. ExPASy TrEMBL
Match: A0A6J1K8M9 (non-specific lipid transfer protein GPI-anchored 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493265 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.4e-59
Identity = 130/185 (70.27%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 3   IKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKEC 62
           +KGGN  VVL + +V + +    V AEE NLKEECSNDF+++VSCFE+ATGKA  PSKEC
Sbjct: 2   MKGGNGVVVLLLLLVGLCL----VGAEEENLKEECSNDFQQVVSCFEFATGKAAAPSKEC 61

Query: 63  CDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLL 122
           CDSIE IKERKP+CLCFFIQ+THNGNQQIKS+GI E KLLQLPSVC LKNSSV+YCPKLL
Sbjct: 62  CDSIESIKERKPKCLCFFIQQTHNGNQQIKSMGILETKLLQLPSVCQLKNSSVSYCPKLL 121

Query: 123 GLPANSPDAAIFSNTTSRATTTSTTTTTKTTPGGSSSAKMVANFP-GLVAVAFIVVVLFG 182
           GLPANSPDAAIFSN T+ AT  +  TTT+T+PGGSS  +MVAN P GL+AVA + V++F 
Sbjct: 122 GLPANSPDAAIFSNITTPATPAA--TTTRTSPGGSSGTRMVANSPAGLLAVA-VAVIVFT 179

Query: 183 AFVQP 187
           AF+ P
Sbjct: 182 AFLPP 179

[Close]

BLAST of Sed0009571.1 vs. TAIR 10
Match: AT1G27950.1 (glycosylphosphatidylinositol-anchored lipid protein transfer 1 )

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35
Identity = 80/185 (43.24%), Postives = 117/185 (63.24%), Query Frame = 0


Query: 3   IKGGNYGVVLAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKEC 62
           +KG +  +VL    +   +  +   A    L +EC+ DF+K+  C ++ATGKA  PSK+C
Sbjct: 1   MKGLHLHLVLVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKC 60

Query: 63  CDSIEGIKERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLL 122
           CD++E IKER P+CLCF IQ+   G Q +K LG++E KL+QLP+ C L N+S+T CPKLL
Sbjct: 61  CDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPKLL 120

Query: 123 GLPANSPDAAIFSNTTSR-----ATTTSTTTTTKTTPGGSSSAK----MVANFPGLVAVA 179
           G+  +SPDAA+F+N  +      A  +  T  T T  GGS+SAK    +VA    L+AV+
Sbjct: 121 GISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASAKDGHAVVALAVALMAVS 180

[Close]

BLAST of Sed0009571.1 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0


Query: 13  AVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGIKER 72
           A+A++ V + +    A++   KEEC+     + +C  Y  GKA  P+ +CC  ++ +   
Sbjct: 12  AIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINS 71

Query: 73  KPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSPDAA 132
             +CLC  IQE    N     L +     L LPSVCH   + +T CP LL L  NSPDA 
Sbjct: 72  DMKCLCMIIQER---NDPDLGLQVNVSLALALPSVCH-ATADITKCPALLHLDPNSPDAQ 131

Query: 133 IF-------SNTTSRATTT---STTTTTKTTPGGSS 159
           +F       + T S +  T   S  T+  +TPG S+
Sbjct: 132 VFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSA 163

[Close]

BLAST of Sed0009571.1 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-13
Identity = 48/147 (32.65%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 11  VLAVAVVAVVVFLSGVVAEERNL-KEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGI 70
           ++A A+  +VV +    A+++   KEEC+     + +C  Y  G+A  P+ +CC  ++ +
Sbjct: 8   LMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQV 67

Query: 71  KERKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSP 130
                +CLC  IQ+    N     L I     L LPSVCH   + VT CP LL L  NSP
Sbjct: 68  LNSNKKCLCVIIQDR---NDPDLGLQINVSLALALPSVCHAA-ADVTKCPALLHLDPNSP 127

Query: 131 DAAIFSNTTSRATTTS-TTTTTKTTPG 156
           DA +F         T   +  T ++PG
Sbjct: 128 DAQVFYQLAKGLNKTGPASAPTGSSPG 150

[Close]

BLAST of Sed0009571.1 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.2e-06
Identity = 40/173 (23.12%), Postives = 80/173 (46.24%), Query Frame = 0


Query: 12  LAVAVVAVVVFLSGVVAEERNLKEECSNDFEKLVSCFEYATGKAVGPSKECCDSIEGIKE 71
           + + +V + VF++ + +   + +  C+N    +  C  Y TG +  P+++CC+ +  + +
Sbjct: 3   MEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQ 62

Query: 72  RKPECLCFFIQETHNGNQQIKSLGIEEIKLLQLPSVCHLKNSSVTYCPKLLGLPANSPDA 131
             P+CLC   Q  + G  Q+  + + + + L LP  C+++   V+ C    G   ++ D+
Sbjct: 63  SSPDCLC---QVLNGGGSQL-GINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTSDS 122

Query: 132 AIFSNTTSRATTTSTTTTTKTTPGGSSS--AKMVANFPGLVAVAFIVVVLFGA 183
              S  +S     S T       G  SS  + +  +FP    +AF   V + A
Sbjct: 123 PAESPNSSGPGNGSKTVPVGEGDGPPSSDGSSIKFSFP---LIAFFSAVSYMA 168

The following BLAST results are available for this feature:

BLAST of Sed0009571.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891858.1	7.5e-63	68.91	non-specific lipid transfer protein GPI-anchored 1 [Benincasa hispida]	[more]
XP_022956488.1	2.8e-62	71.20	non-specific lipid transfer protein GPI-anchored 1-like [Cucurbita moschata] >KA...	[more]
KAA0034189.1	2.4e-61	72.38	non-specific lipid transfer protein GPI-anchored 1 [Cucumis melo var. makuwa]	[more]
XP_008446028.1	2.4e-61	72.38	PREDICTED: non-specific lipid transfer protein GPI-anchored 1 [Cucumis melo]	[more]
XP_023546548.1	3.1e-61	71.73	non-specific lipid transfer protein GPI-anchored 1-like [Cucurbita pepo subsp. p...	[more]

BLAST of Sed0009571.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7F7	4.4e-34	43.24	Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana OX=37...	[more]
O64864	1.9e-13	33.33	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
O64865	8.1e-12	32.65	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	7.4e-05	23.12	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Sed0009571.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GX01	1.4e-62	71.20	non-specific lipid transfer protein GPI-anchored 1-like OS=Cucurbita moschata OX...	[more]
A0A5A7SYJ3	1.2e-61	72.38	Non-specific lipid transfer protein GPI-anchored 1 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BER8	1.2e-61	72.38	non-specific lipid transfer protein GPI-anchored 1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KV96	8.3e-60	69.19	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G589340 PE=4 SV...	[more]
A0A6J1K8M9	1.4e-59	70.27	non-specific lipid transfer protein GPI-anchored 1-like OS=Cucurbita maxima OX=3...	[more]

BLAST of Sed0009571.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27950.1	3.2e-35	43.24	glycosylphosphatidylinositol-anchored lipid protein transfer 1	[more]
AT2G44290.1	1.4e-14	33.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44300.1	5.8e-13	32.65	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	5.2e-06	23.12	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..118 e-value: 1.5E-7 score: 41.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 18..118 e-value: 1.7E-10 score: 40.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 34..115 e-value: 1.7E-15 score: 58.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 36..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..157
None	No IPR available	PANTHER	PTHR33044:SF118	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1	coord: 12..171
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 44..110 e-value: 6.28184E-12 score: 56.2811
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 12..171

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009571	Sed0009571	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009571.1-five_prime_utr	Sed0009571.1-five_prime_utr-LG06:42311322..42311338	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009571.1-exon	Sed0009571.1-exon-LG06:42311322..42311696	exon
Sed0009571.1-exon	Sed0009571.1-exon-LG06:42313395..42313946	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009571.1-cds	Sed0009571.1-cds-LG06:42311339..42311696	CDS
Sed0009571.1-cds	Sed0009571.1-cds-LG06:42313395..42313612	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009571.1-three_prime_utr	Sed0009571.1-three_prime_utr-LG06:42313613..42313946	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009571.1	Sed0009571.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042335	cuticle development
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0006869	lipid transport
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009505	plant-type cell wall
molecular_function	GO:0008289	lipid binding