Sed0009034.2 (mRNA) Chayote v1

Overview


Name	Sed0009034.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Thioredoxin
Location	LG01: 17646748 .. 17649038 (-)
Sequence length	2078
RNA-Seq Expression	Sed0009034.2
Synteny	Sed0009034.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGTTAAATAAACGTTGTTTGAAAACGACGGAAGAGGGGTAACAGAGTAAATTCGCAAGACAAATACGTGAAAACTCAAAACTGCTACAAAAAAAAAAAAAGAAAAGAAAAAGATTCCTTATCCAAAAATTTCAAAGATAAAGCGGAAACGGAAAATTCATACAGAGTCAGTAACCCTAACCCTAACCCTAACCCCGTTATTCCCGTTCATTCCATCCTCACGAACCAGACCTAATTCTCAATTATTAGCCTGTAATTGAGACATTCAAAACACTAATCCAACTCTAATCAATGGCTAATTATTTATCCCCCAATAAAGTTTGAAAATTGATGAAAACCCACCACCCAAATCCGGAATCTTACCCTCTCTCTCAATTCTCCGTTCCGTTTCTATTCAAATCGATAAATGTTTCGAATCAAATGGATAAAGTTTAATCCGAATCAGACTGCCCCACTTGTCCTTTTTTTCTTTCTTTATATGTCCCCTTCTTCCTCTTCAATTTCCTTCTCCATTTCCTCAGCTTTTTTTCAAGGAAAATAAACCTCCACGTCTTCAACCCTCCTCATTTTCGCTGTAAATCTCTTGTTTTTGGTTTTTTCTCCCGTTTTTGGTTCAATCTCGAAGGATTACAGGTGGGATTCTTTCTGGGTTTTAAGGCTTTTCGTGTTCTTCCTTGTTGCGGGGTCGATTCTGCTTGATCAGAGATCGAGTTTGAGGCCATTCTCTTTGTGGGGTTCTTCTATTTTGTGCTGATTGATAATCTCTTGACGGCCGTTTGATTTTTGTCTCTGCCATGGCTTGTTCCTTGAAGGCTGGTCTCTCTGTTTCAGGGCTGAACGATGATTTGTATTCCTCCAAATCATCTGGGGTTTCTGGGTTTTGTACTTTTATTCGTGCTTCTAATTTAAAAGGGTCGAATCAGAAGGATTTCTTGGGAAACCCAGTGGCGATTTCGTCTCAAAATGGCGTTAGGAACTGGAACCCTAAATCCCCAAATGGCCTAACCATTAATGTAAGCGTTTTTTTTTTTTTGCTTTGTTTATTTCTTTGTAAATGTTCCCATTTAGTGTTTGTTTGGTAATGTTCTGGGTCTGAAATTGATTTGTGAATTGATTTGTGGGTGTAGGCACAGGCTTCTATCTGTATAAGCCGAGCTCAGAGATGGTGGGATAAAACCTTGAAACCTAACATGGTGGAGATCCACTCTGCACAAGCCCTTGTAGATGCTTTGATTGATGCTGGTGATAGATTAGCCATTATTGATTTCTATTCCCCTGGCTGTGGAGGTTGCAAAGCTCTTCATCCTAAGGTATTAACTTGTTTGCTGGTTAAGTTCTTGTTATGTGTTAGGAATCATATTTGTACTTTGATTTTGGAATGTTGCTGATTGAATCCATTTCTATATCAGATCTGTCAACTGGCTGAATTGAACCCTGATGCTATTTTTCTCAAAGTTAACTTTGAAGAGCTCAATACCATGTGCCAAGCCCTCCATATTCGTGTTCTTCCTTTCTTTAGGTTCTATAGAGGTGGAGAAGGTCGTGTTTCTAGCTTTAGCTGTACCAATGCAACTGTAAGAACAATGTCCACATTTTCCATTACTGAAACAAACAAAAGAATCTCCATGGCTTATGTCTAACTTTCATCTTCGATTGTTGCATTGCAGATCAAGAAATTCAAGGATGCATTGGCTAAACACGGAACCGAACGATGTAGCATCTTTCCAGCAAAAGGATTAGACGAATCCGAGCTCGAACGGTTGAAAATGGCGGGTGAATTATCATTAGGTTTGCCATCGCCTTATCTCAATGAAGGATCATTGAAGGATTTATATACTTATGGTCCTTGGGGCACATCAAGCAATCAAAGGGAACTTTTGGAAGGCAACAACCTGATTTTTAAGATCTGAAAGCTTGCATTTAGGCAGATTTTAAGATTATTATTTGTGGAGCAAAAAATTTTACTCCATGCTTTTGTATTTGTTTGGTTGAATTCTTTTCATCTTGAGATTCTTGTACATAGTGAAGATTGGGGGTTTCCCCCATTAATTAAGCAAGGCCTCTGATTTTTCCTAGTTTGTGCCTTGTTTTTCTGCATTGCCTAATCTGTTGAAAGAACTGGAATTGGCTGTCTGTTTCAGTTTTTTTTTTAATACACAGATGAAGCTTTTGATTTTGATTCATTTCTTCTCTTCTGATATGCTTTCCTTTCTCACCATTTTCTCCTCTGTTTCACTTTAGAACAATTTGTACTTCAAAACTTTATCCAATGGTTATTTCATTAAAGAA

mRNA sequence

CTTGGTTAAATAAACGTTGTTTGAAAACGACGGAAGAGGGGTAACAGAGTAAATTCGCAAGACAAATACGTGAAAACTCAAAACTGCTACAAAAAAAAAAAAAGAAAAGAAAAAGATTCCTTATCCAAAAATTTCAAAGATAAAGCGGAAACGGAAAATTCATACAGAGTCAGTAACCCTAACCCTAACCCTAACCCCGTTATTCCCGTTCATTCCATCCTCACGAACCAGACCTAATTCTCAATTATTAGCCTGTAATTGAGACATTCAAAACACTAATCCAACTCTAATCAATGGCTAATTATTTATCCCCCAATAAAGTTTGAAAATTGATGAAAACCCACCACCCAAATCCGGAATCTTACCCTCTCTCTCAATTCTCCGTTCCGTTTCTATTCAAATCGATAAATGTTTCGAATCAAATGGATAAAGTTTAATCCGAATCAGACTGCCCCACTTGTCCTTTTTTTCTTTCTTTATATGTCCCCTTCTTCCTCTTCAATTTCCTTCTCCATTTCCTCAGCTTTTTTTCAAGGAAAATAAACCTCCACGTCTTCAACCCTCCTCATTTTCGCTGTAAATCTCTTGTTTTTGGTTTTTTCTCCCGTTTTTGGTTCAATCTCGAAGGATTACAGGTGGGATTCTTTCTGGGTTTTAAGGCTTTTCGTGTTCTTCCTTGTTGCGGGGTCGATTCTGCTTGATCAGAGATCGAGTTTGAGGCCATTCTCTTTGTGGGGTTCTTCTATTTTGTGCTGATTGATAATCTCTTGACGGCCGTTTGATTTTTGTCTCTGCCATGGCTTGTTCCTTGAAGGCTGGTCTCTCTGTTTCAGGGCTGAACGATGATTTGTATTCCTCCAAATCATCTGGGGTTTCTGGGTTTTGTACTTTTATTCGTGCTTCTAATTTAAAAGGGTCGAATCAGAAGGATTTCTTGGGAAACCCAGTGGCGATTTCGTCTCAAAATGGCGTTAGGAACTGGAACCCTAAATCCCCAAATGGCCTAACCATTAATGCACAGGCTTCTATCTGTATAAGCCGAGCTCAGAGATGGTGGGATAAAACCTTGAAACCTAACATGGTGGAGATCCACTCTGCACAAGCCCTTGTAGATGCTTTGATTGATGCTGGTGATAGATTAGCCATTATTGATTTCTATTCCCCTGGCTGTGGAGGTTGCAAAGCTCTTCATCCTAAGATCTGTCAACTGGCTGAATTGAACCCTGATGCTATTTTTCTCAAAGTTAACTTTGAAGAGCTCAATACCATGTGCCAAGCCCTCCATATTCGTGTTCTTCCTTTCTTTAGGTTCTATAGAGGTGGAGAAGGTCGTGTTTCTAGCTTTAGCTGTACCAATGCAACTGTAAGAACAATGTCCACATTTTCCATTACTGAAACAAACAAAAGAATCTCCATGGCTTATGTCTAACTTTCATCTTCGATTGTTGCATTGCAGATCAAGAAATTCAAGGATGCATTGGCTAAACACGGAACCGAACGATGTAGCATCTTTCCAGCAAAAGGATTAGACGAATCCGAGCTCGAACGGTTGAAAATGGCGGGTGAATTATCATTAGGTTTGCCATCGCCTTATCTCAATGAAGGATCATTGAAGGATTTATATACTTATGGTCCTTGGGGCACATCAAGCAATCAAAGGGAACTTTTGGAAGGCAACAACCTGATTTTTAAGATCTGAAAGCTTGCATTTAGGCAGATTTTAAGATTATTATTTGTGGAGCAAAAAATTTTACTCCATGCTTTTGTATTTGTTTGGTTGAATTCTTTTCATCTTGAGATTCTTGTACATAGTGAAGATTGGGGGTTTCCCCCATTAATTAAGCAAGGCCTCTGATTTTTCCTAGTTTGTGCCTTGTTTTTCTGCATTGCCTAATCTGTTGAAAGAACTGGAATTGGCTGTCTGTTTCAGTTTTTTTTTTAATACACAGATGAAGCTTTTGATTTTGATTCATTTCTTCTCTTCTGATATGCTTTCCTTTCTCACCATTTTCTCCTCTGTTTCACTTTAGAACAATTTGTACTTCAAAACTTTATCCAATGGTTATTTCATTAAAGAA

Coding sequence (CDS)

ATGGCTTGTTCCTTGAAGGCTGGTCTCTCTGTTTCAGGGCTGAACGATGATTTGTATTCCTCCAAATCATCTGGGGTTTCTGGGTTTTGTACTTTTATTCGTGCTTCTAATTTAAAAGGGTCGAATCAGAAGGATTTCTTGGGAAACCCAGTGGCGATTTCGTCTCAAAATGGCGTTAGGAACTGGAACCCTAAATCCCCAAATGGCCTAACCATTAATGCACAGGCTTCTATCTGTATAAGCCGAGCTCAGAGATGGTGGGATAAAACCTTGAAACCTAACATGGTGGAGATCCACTCTGCACAAGCCCTTGTAGATGCTTTGATTGATGCTGGTGATAGATTAGCCATTATTGATTTCTATTCCCCTGGCTGTGGAGGTTGCAAAGCTCTTCATCCTAAGATCTGTCAACTGGCTGAATTGAACCCTGATGCTATTTTTCTCAAAGTTAACTTTGAAGAGCTCAATACCATGTGCCAAGCCCTCCATATTCGTGTTCTTCCTTTCTTTAGGTTCTATAGAGGTGGAGAAGGTCGTGTTTCTAGCTTTAGCTGTACCAATGCAACTGTAAGAACAATGTCCACATTTTCCATTACTGAAACAAACAAAAGAATCTCCATGGCTTATGTCTAA

Protein sequence

MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQKDFLGNPVAISSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATVRTMSTFSITETNKRISMAYV

Homology

[Close]

BLAST of Sed0009034.2 vs. NCBI nr
Match: XP_038893672.1 (thioredoxin-like 1-2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 1.0e-84
Identity = 162/214 (75.70%), Postives = 174/214 (81.31%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK   SVSGL D+L  S SSG+SGF T IR SN+KGS Q        DFLG P+ I
Sbjct: 1   MACSLKIAFSVSGLKDNLRCSNSSGISGFSTSIRTSNIKGSKQPGFPVLTVDFLGKPIVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S Q GVRN NPK+PN LTINAQASICISRA+RWW+KT KPNMVEIHSAQALVDAL+DAGD
Sbjct: 61  SDQIGVRNSNPKAPNRLTINAQASICISRARRWWEKTSKPNMVEIHSAQALVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL TMCQALHIRVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELKTMCQALHIRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVRTMSTFSITETNKRISM 208
           RGGEGRV SFSCTNAT++      +     R S+
Sbjct: 181 RGGEGRVCSFSCTNATIKKFKDALVKHGTDRCSI 214

[Close]

BLAST of Sed0009034.2 vs. NCBI nr
Match: XP_023519468.1 (thioredoxin-like 1-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.5e-84
Identity = 159/198 (80.30%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK GLSVSGL D L  S SSGVSGF T + AS+LK S Q        DFLGNPV I
Sbjct: 1   MACSLKTGLSVSGLKDHLCYSNSSGVSGFSTSVCASSLKVSKQPGFPVLSVDFLGNPVVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S +NG+RN N K+PN LT+ AQASIC+SRA+RWW+KTLKPNMVEIHSAQALVDAL+DAGD
Sbjct: 61  SDRNGIRNSNAKAPNRLTVYAQASICVSRARRWWEKTLKPNMVEIHSAQALVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL TMCQALHIRVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELKTMCQALHIRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCTNAT++
Sbjct: 181 RGGEGRVCSFSCTNATIK 198

[Close]

BLAST of Sed0009034.2 vs. NCBI nr
Match: KAG6584469.1 (Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020056.1 Thioredoxin-like 1-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.9 bits (821), Expect = 8.4e-84
Identity = 159/198 (80.30%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK GLSVSGL D L  S SSGVSGF T + AS+LK S Q        DFLGNPV I
Sbjct: 1   MACSLKTGLSVSGLKDRLCYSNSSGVSGFSTSVCASSLKVSKQPGFPVLSVDFLGNPVVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S +NG+RN N K+PN LT+ AQASIC+SRA+RWW+KTLKPNMVEIHSAQALVDAL+DAGD
Sbjct: 61  SDRNGIRNSNAKAPNRLTVYAQASICVSRARRWWEKTLKPNMVEIHSAQALVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL TMCQALHIRVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELKTMCQALHIRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCTNAT++
Sbjct: 181 RGGEGRVCSFSCTNATIK 198

[Close]

BLAST of Sed0009034.2 vs. NCBI nr
Match: XP_008443897.1 (PREDICTED: thioredoxin-like 1-2, chloroplastic [Cucumis melo] >KAA0036094.1 thioredoxin-like 1-2 [Cucumis melo var. makuwa] >TYJ98902.1 thioredoxin-like 1-2 [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.5e-83
Identity = 158/198 (79.80%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK+ LSVSGL D+L  S SSG+SGF T I ASNLKGS Q        DFLG PV I
Sbjct: 1   MACSLKSALSVSGLKDNLGCSISSGISGFSTSISASNLKGSKQPGFPVLKVDFLGTPVVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGV N NPK+PN  TINAQ SICISRA+RWW+K  KPNMVEIHSAQ LVDAL+DAGD
Sbjct: 61  SDQNGVTNSNPKTPNRFTINAQTSICISRARRWWEKASKPNMVEIHSAQDLVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL TMCQALH+RVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELKTMCQALHVRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCTNAT++
Sbjct: 181 RGGEGRVCSFSCTNATIK 198

[Close]

BLAST of Sed0009034.2 vs. NCBI nr
Match: XP_022949521.1 (thioredoxin-like 1-2, chloroplastic [Cucurbita moschata] >KAG6607457.1 Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037113.1 Thioredoxin-like 1-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-82
Identity = 157/198 (79.29%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK GLSVSGL D+  SSKSS +SG CT    +NLKGS QK       DFLG PV +
Sbjct: 1   MACSLKTGLSVSGLKDNFRSSKSSVISGVCT----ANLKGSTQKGFPVLRVDFLGRPVVV 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGVRN NPKSPN LTINAQASICI R+QRWW+K+LKPNMVEIHSAQALV+AL+DAGD
Sbjct: 61  SDQNGVRNSNPKSPNVLTINAQASICIGRSQRWWEKSLKPNMVEIHSAQALVEALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCK LHPKICQLAEL+PDAIFLKVNFEEL TMCQALHIRVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKTLHPKICQLAELHPDAIFLKVNFEELKTMCQALHIRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCT +T++
Sbjct: 181 RGGEGRVCSFSCTISTIK 194

[Close]

BLAST of Sed0009034.2 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-46
Identity = 85/156 (54.49%), Postives = 113/156 (72.44%), Query Frame = 0


Query: 36  SNLKGSNQKDFLGNPVAISSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNM 95
           S L+   +  FLG  +A+    G R   P  P  L    Q ++  ++A +WW+K L+PNM
Sbjct: 42  SALRIGRRSPFLGRRLAV----GPRRSRP-VPRNLVAPVQMNLAFAKATKWWEKGLQPNM 101

Query: 96  VEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL 155
            E+ SAQ LVD+L +AGD L I+DF+SPGCGGC+ALHPKICQ+AE NPD +FL+VN+EE 
Sbjct: 102 REVESAQDLVDSLTNAGDNLVIVDFFSPGCGGCRALHPKICQIAEQNPDVLFLQVNYEEH 161

Query: 156 NTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATVR 192
            +MC +LH+ VLPFFRFYRG +GR+ SFSCTNAT++
Sbjct: 162 KSMCYSLHVHVLPFFRFYRGAQGRLCSFSCTNATIK 192

[Close]

BLAST of Sed0009034.2 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-45
Identity = 82/151 (54.30%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 41  SNQKDFLGNPVAISSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHS 100
           S++  F    VA++     R   P   N    + Q ++ I +A RWW+K L+PNM EI S
Sbjct: 45  SSKSTFPSGRVALTE----RKARPLPRNLEAAHGQMNLTIGKAMRWWEKCLQPNMREIES 104

Query: 101 AQALVDALIDAGDRLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQ 160
           AQ L D+L++AGD+L ++DF+SPGCGGC+ALHPKI QLAE NP+ +FL+VN+E+  +MC 
Sbjct: 105 AQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPEVLFLQVNYEKHKSMCY 164

Query: 161 ALHIRVLPFFRFYRGGEGRVSSFSCTNATVR 192
           +LH+ VLPFFRFYRG +GRVSSFSCTNAT++
Sbjct: 165 SLHVHVLPFFRFYRGAQGRVSSFSCTNATIK 191

[Close]

BLAST of Sed0009034.2 vs. ExPASy Swiss-Prot
Match: O64654 (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 72  INAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKAL 131
           I AQ ++ I  AQ+WW+K LK NM EI SAQ LVD+L +AGD+L ++DF+SPGCGGCKAL
Sbjct: 76  ITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKAL 135

Query: 132 HPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATVR 191
           HPKICQ AE+NPD  FL+VN+EE  +MC +L + VLPFFRFYRG +GRV SFSCTNAT++
Sbjct: 136 HPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIK 195

[Close]

BLAST of Sed0009034.2 vs. ExPASy Swiss-Prot
Match: Q9XFI1 (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-43
Identity = 77/115 (66.96%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 76  ASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKALHPKI 135
           +SI +SR  RWW+K+   NM+EI SA  LVD+L++AGDRL ++DFYSPGCGGCK+LHPKI
Sbjct: 68  SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKI 127

Query: 136 CQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATV 191
           CQLAE NP+ +FLKVN EEL TMC  L++ VLPFF+FYRG EG+V SFSCT AT+
Sbjct: 128 CQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATI 182

[Close]

BLAST of Sed0009034.2 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.4e-42
Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 53  ISSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAG 112
           IS +NG   ++ K      +  Q S+ I R Q+WW+K LKPNM  + S Q LV +L +AG
Sbjct: 54  ISGENGNILFSKKKIPAF-VRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAG 113

Query: 113 DRLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRF 172
           D+L ++DF+SP CGGCKALHPKIC++AE NP+  FL+VN+EE  ++CQ+L+I VLPFFRF
Sbjct: 114 DKLVVVDFFSPSCGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRF 173

Query: 173 YRGGEGRVSSFSCTNATVR 192
           YRG  GRV SFSCTNAT+R
Sbjct: 174 YRGSSGRVCSFSCTNATIR 191

[Close]

BLAST of Sed0009034.2 vs. ExPASy TrEMBL
Match: A0A5D3BGL0 (Thioredoxin-like 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00990 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 158/198 (79.80%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK+ LSVSGL D+L  S SSG+SGF T I ASNLKGS Q        DFLG PV I
Sbjct: 1   MACSLKSALSVSGLKDNLGCSISSGISGFSTSISASNLKGSKQPGFPVLKVDFLGTPVVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGV N NPK+PN  TINAQ SICISRA+RWW+K  KPNMVEIHSAQ LVDAL+DAGD
Sbjct: 61  SDQNGVTNSNPKTPNRFTINAQTSICISRARRWWEKASKPNMVEIHSAQDLVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL TMCQALH+RVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELKTMCQALHVRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCTNAT++
Sbjct: 181 RGGEGRVCSFSCTNATIK 198

[Close]

BLAST of Sed0009034.2 vs. ExPASy TrEMBL
Match: A0A1S3B967 (thioredoxin-like 1-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487353 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 158/198 (79.80%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK+ LSVSGL D+L  S SSG+SGF T I ASNLKGS Q        DFLG PV I
Sbjct: 1   MACSLKSALSVSGLKDNLGCSISSGISGFSTSISASNLKGSKQPGFPVLKVDFLGTPVVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGV N NPK+PN  TINAQ SICISRA+RWW+K  KPNMVEIHSAQ LVDAL+DAGD
Sbjct: 61  SDQNGVTNSNPKTPNRFTINAQTSICISRARRWWEKASKPNMVEIHSAQDLVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEEL TMCQALH+RVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELKTMCQALHVRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCTNAT++
Sbjct: 181 RGGEGRVCSFSCTNATIK 198

[Close]

BLAST of Sed0009034.2 vs. ExPASy TrEMBL
Match: A0A6J1KHS2 (thioredoxin-like 1-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493357 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 157/198 (79.29%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK GLSVSGL D+  SSKSS +SG CT    +NLKGS QK       DFLG PV +
Sbjct: 1   MACSLKTGLSVSGLKDNFRSSKSSVISGVCT----ANLKGSTQKGFPVLRVDFLGKPVVV 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGVRN NPKSPN LTINAQASICI R+QRWW+K+LKPNMVEIHSAQALV+AL+DAGD
Sbjct: 61  SDQNGVRNSNPKSPNVLTINAQASICIGRSQRWWEKSLKPNMVEIHSAQALVEALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCK LHPKICQLAEL+PDAIFLKVNFEEL TMCQALHIRVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKTLHPKICQLAELHPDAIFLKVNFEELKTMCQALHIRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCT +T++
Sbjct: 181 RGGEGRVCSFSCTISTIK 194

[Close]

BLAST of Sed0009034.2 vs. ExPASy TrEMBL
Match: A0A6J1GC85 (thioredoxin-like 1-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452849 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 157/198 (79.29%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MACSLK GLSVSGL D+  SSKSS +SG CT    +NLKGS QK       DFLG PV +
Sbjct: 1   MACSLKTGLSVSGLKDNFRSSKSSVISGVCT----ANLKGSTQKGFPVLRVDFLGRPVVV 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGVRN NPKSPN LTINAQASICI R+QRWW+K+LKPNMVEIHSAQALV+AL+DAGD
Sbjct: 61  SDQNGVRNSNPKSPNVLTINAQASICIGRSQRWWEKSLKPNMVEIHSAQALVEALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCK LHPKICQLAEL+PDAIFLKVNFEEL TMCQALHIRVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKTLHPKICQLAELHPDAIFLKVNFEELKTMCQALHIRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVR 192
           RGGEGRV SFSCT +T++
Sbjct: 181 RGGEGRVCSFSCTISTIK 194

[Close]

BLAST of Sed0009034.2 vs. ExPASy TrEMBL
Match: A0A0A0LSS1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G038320 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 159/214 (74.30%), Postives = 171/214 (79.91%), Query Frame = 0


Query: 1   MACSLKAGLSVSGLNDDLYSSKSSGVSGFCTFIRASNLKGSNQK-------DFLGNPVAI 60
           MA SLK+ LSVSGL D+L  S SSG+SGF T I ASNLKG  Q        DFLG P+ I
Sbjct: 1   MASSLKSALSVSGLEDNLRCSISSGISGFSTSISASNLKGYKQPGFPVLKVDFLGRPLVI 60

Query: 61  SSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGD 120
           S QNGV N NPK+PN  TINAQ SICISRA+RWW+KT KPNMVEIHSAQALVDAL+DAGD
Sbjct: 61  SDQNGVTNSNPKTPNRFTINAQTSICISRARRWWEKTSKPNMVEIHSAQALVDALLDAGD 120

Query: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFY 180
           RLAIIDFYSPGCGGCKALHPKICQLAELNPDA+FLKVNFEEL TMCQALH+RVLPFFRFY
Sbjct: 121 RLAIIDFYSPGCGGCKALHPKICQLAELNPDAVFLKVNFEELKTMCQALHVRVLPFFRFY 180

Query: 181 RGGEGRVSSFSCTNATVRTMSTFSITETNKRISM 208
           RGGEGRV SFSCTNAT++            R SM
Sbjct: 181 RGGEGRVCSFSCTNATIKKFKDALAKHGTDRCSM 214

[Close]

BLAST of Sed0009034.2 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 181.4 bits (459), Expect = 7.4e-46
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 72  INAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKAL 131
           I AQ ++ I  AQ+WW+K LK NM EI SAQ LVD+L +AGD+L ++DF+SPGCGGCKAL
Sbjct: 76  ITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKAL 135

Query: 132 HPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATVR 191
           HPKICQ AE+NPD  FL+VN+EE  +MC +L + VLPFFRFYRG +GRV SFSCTNAT++
Sbjct: 136 HPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIK 195

[Close]

BLAST of Sed0009034.2 vs. TAIR 10
Match: AT1G08570.2 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 181.4 bits (459), Expect = 7.4e-46
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 72  INAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKAL 131
           I AQ ++ I  AQ+WW+K LK NM EI SAQ LVD+L +AGD+L ++DF+SPGCGGCKAL
Sbjct: 45  ITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKAL 104

Query: 132 HPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATVR 191
           HPKICQ AE+NPD  FL+VN+EE  +MC +L + VLPFFRFYRG +GRV SFSCTNAT++
Sbjct: 105 HPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIK 164

[Close]

BLAST of Sed0009034.2 vs. TAIR 10
Match: AT5G61440.1 (atypical CYS HIS rich thioredoxin 5 )

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-44
Identity = 77/115 (66.96%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 76  ASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKALHPKI 135
           +SI +SR  RWW+K+   NM+EI SA  LVD+L++AGDRL ++DFYSPGCGGCK+LHPKI
Sbjct: 68  SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKI 127

Query: 136 CQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATV 191
           CQLAE NP+ +FLKVN EEL TMC  L++ VLPFF+FYRG EG+V SFSCT AT+
Sbjct: 128 CQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATI 182

[Close]

BLAST of Sed0009034.2 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 )

HSP 1 Score: 172.2 bits (435), Expect = 4.5e-43
Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 53  ISSQNGVRNWNPKSPNGLTINAQASICISRAQRWWDKTLKPNMVEIHSAQALVDALIDAG 112
           IS +NG   ++ K      +  Q S+ I R Q+WW+K LKPNM  + S Q LV +L +AG
Sbjct: 54  ISGENGNILFSKKKIPAF-VRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAG 113

Query: 113 DRLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEELNTMCQALHIRVLPFFRF 172
           D+L ++DF+SP CGGCKALHPKIC++AE NP+  FL+VN+EE  ++CQ+L+I VLPFFRF
Sbjct: 114 DKLVVVDFFSPSCGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRF 173

Query: 173 YRGGEGRVSSFSCTNATVR 192
           YRG  GRV SFSCTNAT+R
Sbjct: 174 YRGSSGRVCSFSCTNATIR 191

[Close]

BLAST of Sed0009034.2 vs. TAIR 10
Match: AT1G08570.3 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 67/97 (69.07%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 95  MVEIHSAQALVDALIDAGDRLAIIDFYSPGCGGCKALHPKICQLAELNPDAIFLKVNFEE 154
           M EI SAQ LVD+L +AGD+L ++DF+SPGCGGCKALHPKICQ AE+NPD  FL+VN+EE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 155 LNTMCQALHIRVLPFFRFYRGGEGRVSSFSCTNATVR 192
             +MC +L + VLPFFRFYRG +GRV SFSCTNAT++
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIK 97

The following BLAST results are available for this feature:

BLAST of Sed0009034.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893672.1	1.0e-84	75.70	thioredoxin-like 1-2, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_023519468.1	6.5e-84	80.30	thioredoxin-like 1-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6584469.1	8.4e-84	80.30	Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_008443897.1	2.5e-83	79.80	PREDICTED: thioredoxin-like 1-2, chloroplastic [Cucumis melo] >KAA0036094.1 thio...	[more]
XP_022949521.1	2.1e-82	79.29	thioredoxin-like 1-2, chloroplastic [Cucurbita moschata] >KAG6607457.1 Thioredox...	[more]

BLAST of Sed0009034.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10M18	2.5e-46	54.49	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q6Z4N3	4.7e-45	54.30	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
O64654	1.0e-44	65.83	Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570...	[more]
Q9XFI1	2.0e-43	66.96	Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440...	[more]
O22779	6.4e-42	56.83	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270...	[more]

BLAST of Sed0009034.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGL0	1.2e-83	79.80	Thioredoxin-like 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248...	[more]
A0A1S3B967	1.2e-83	79.80	thioredoxin-like 1-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487353 PE=4...	[more]
A0A6J1KHS2	1.0e-82	79.29	thioredoxin-like 1-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493357 ...	[more]
A0A6J1GC85	1.0e-82	79.29	thioredoxin-like 1-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145284...	[more]
A0A0A0LSS1	1.7e-82	74.30	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G038320...	[more]

BLAST of Sed0009034.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08570.1	7.4e-46	65.83	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.2	7.4e-46	65.83	atypical CYS HIS rich thioredoxin 4	[more]
AT5G61440.1	1.4e-44	66.96	atypical CYS HIS rich thioredoxin 5	[more]
AT2G33270.1	4.5e-43	56.83	atypical CYS HIS rich thioredoxin 3	[more]
AT1G08570.3	1.3e-37	69.07	atypical CYS HIS rich thioredoxin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 106..184 e-value: 7.4E-14 score: 51.6
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 85..193 e-value: 7.4E-18 score: 66.3
None	No IPR available	PANTHER	PTHR43601:SF17	THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC	coord: 1..193
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 1..193
None	No IPR available	CDD	cd02947	TRX_family	coord: 106..183 e-value: 5.12033E-20 score: 78.754
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 85..177

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009034	Sed0009034	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009034.2-exon	Sed0009034.2-exon-LG01:17646748..17647627	exon
Sed0009034.2-exon	Sed0009034.2-exon-LG01:17647727..17647909	exon
Sed0009034.2-exon	Sed0009034.2-exon-LG01:17648024..17649038	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009034.2-three_prime_utr	Sed0009034.2-three_prime_utr-LG01:17646748..17647396	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009034.2-cds	Sed0009034.2-cds-LG01:17647397..17647627	CDS
Sed0009034.2-cds	Sed0009034.2-cds-LG01:17647727..17647909	CDS
Sed0009034.2-cds	Sed0009034.2-cds-LG01:17648024..17648242	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009034.2-five_prime_utr	Sed0009034.2-five_prime_utr-LG01:17648243..17649038	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009034.2	Sed0009034.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast