Sed0008920.1 (mRNA) Chayote v1

Overview


Name	Sed0008920.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR24-like
Location	LG04: 47040636 .. 47041053 (-)
Sequence length	418
RNA-Seq Expression	Sed0008920.1
Synteny	Sed0008920.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTTCAAAAAAACTCTCTTTCTCTCCAAAACGGATTTGACGATTCGTGTTGGTCGAAGTGTGTGAATTATATCGTACAAACATGGGGCTTCGCCAACTTCTCAAAAGAAACCAAGGAGTTTCAGCCATTCCCAAGGGCCATTGTGCAGTCTATGTAGGAGAGAGCCAAAAGAAGCGATTTTTTATCCTGATAGCGTACTTGAATCAACCATGTTTTCAAGAGCTGCTTTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCTATGGGTGGCCTTACTATTCATTGCAGAAATGACATTTTCATTGATCTCATCACTCATTTAAATGATCTATGAGTGATGTTACAACATTTTAGTAAACAATCAATCTTGTAGGATAGGAACATTAGAAATAGCCAAAACCATGTACATTTTTT

mRNA sequence

CTCCTTCAAAAAAACTCTCTTTCTCTCCAAAACGGATTTGACGATTCGTGTTGGTCGAAGTGTGTGAATTATATCGTACAAACATGGGGCTTCGCCAACTTCTCAAAAGAAACCAAGGAGTTTCAGCCATTCCCAAGGGCCATTGTGCAGTCTATGTAGGAGAGAGCCAAAAGAAGCGATTTTTTATCCTGATAGCGTACTTGAATCAACCATGTTTTCAAGAGCTGCTTTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCTATGGGTGGCCTTACTATTCATTGCAGAAATGACATTTTCATTGATCTCATCACTCATTTAAATGATCTATGAGTGATGTTACAACATTTTAGTAAACAATCAATCTTGTAGGATAGGAACATTAGAAATAGCCAAAACCATGTACATTTTTT

Coding sequence (CDS)

ATGGGGCTTCGCCAACTTCTCAAAAGAAACCAAGGAGTTTCAGCCATTCCCAAGGGCCATTGTGCAGTCTATGTAGGAGAGAGCCAAAAGAAGCGATTTTTTATCCTGATAGCGTACTTGAATCAACCATGTTTTCAAGAGCTGCTTTGTCAGACTGAAGAAGAATTTGGTTACCATCATCCTATGGGTGGCCTTACTATTCATTGCAGAAATGACATTTTCATTGATCTCATCACTCATTTAAATGATCTATGA

Protein sequence

MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPMGGLTIHCRNDIFIDLITHLNDL

Homology

[Close]

BLAST of Sed0008920.1 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 161.4 bits (407), Expect = 3.4e-36
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          MGLRQLLKRNQGVSA+PKG+CAVYVGESQKKRF I I+YLNQPCFQELLCQ EEEFGY+H
Sbjct: 1  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHCR+DIF DLI+ LNDL
Sbjct: 61 PMGGLTIHCRDDIFTDLISRLNDL 84

[Close]

BLAST of Sed0008920.1 vs. NCBI nr
Match: KAA0049710.1 (auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 155.2 bits (391), Expect = 2.5e-34
Identity = 68/84 (80.95%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          M LR LLKRN+GVSA+PKG+CAVYVG+SQKKRF I IAYLN+PCFQELLCQTEEEFGY+H
Sbjct: 1  MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHCR+DIF + I+H+NDL
Sbjct: 61 PMGGLTIHCRDDIFAEFISHMNDL 84

[Close]

BLAST of Sed0008920.1 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          M L  LLKR+QGVS+IPKG+CAVYVGESQKKRF I I+YLNQPCFQELL QTEEEFGYHH
Sbjct: 1  MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHC++ IF +LI+ LNDL
Sbjct: 61 PMGGLTIHCKDAIFTNLISRLNDL 84

[Close]

BLAST of Sed0008920.1 vs. NCBI nr
Match: KAE8645660.1 (hypothetical protein Csa_020551 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.7e-31
Identity = 65/79 (82.28%), Postives = 72/79 (91.14%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          MG+RQLLKRNQGVS IPKG+CAVYVGE+QKKRF I I +LNQ CFQELL QTEE+FGYHH
Sbjct: 1  MGIRQLLKRNQGVSTIPKGYCAVYVGENQKKRFVIPITHLNQSCFQELLSQTEEKFGYHH 60

Query: 61 PMGGLTIHCRNDIFIDLIT 80
          PMGGLTIHCR+DIF DLI+
Sbjct: 61 PMGGLTIHCRDDIFTDLIS 79

[Close]

BLAST of Sed0008920.1 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 7.9e-25
Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1  MGLRQLLKR-----NQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEE 60
          M L QLL+R      +GV+ +PKG+CAVYVGE QKKRF I + YLNQPCFQ+LL Q E+E
Sbjct: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60

Query: 61 FGYHHPMGGLTIHCRNDIFIDLITHLN 83
          FGY+HPMGGLTI CR DIF +LI+ LN
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQLN 87

[Close]

BLAST of Sed0008920.1 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-21
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MGLRQLLKRNQGV-SAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYH 60
          +G +++L R+ G  SA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRNDIFIDLITHL 82
          HPMGGLTI C  D FI++ + L
Sbjct: 68 HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0008920.1 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.2e-21
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYH 60
          +G +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++E+EFG+ 
Sbjct: 8  LGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFD 67

Query: 61 HPMGGLTIHCRNDIFIDLITHL 82
          HPMGGLTI C  D FI++ + L
Sbjct: 68 HPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0008920.1 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.7e-20
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 1  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYH 60
          +G +++L R+    SA PKG  AVYVGESQKKR+ + I+YLNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRNDIFIDL 78
          HPMGGLTI C  D FI++
Sbjct: 68 HPMGGLTIPCPEDTFINV 85

[Close]

BLAST of Sed0008920.1 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-20
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 4  RQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPM 63
          +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ HPM
Sbjct: 11 KKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPM 70

Query: 64 GGLTIHCRNDIFIDLITHLN 83
          GGLTI C  D FI++ + L+
Sbjct: 71 GGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Sed0008920.1 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-20
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          +G +++L R+   SA PKG  AVYVGESQKKR+ + ++YL+QP FQ LL ++EEEFG+ H
Sbjct: 8  LGAKKILSRST-ASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 67

Query: 61 PMGGLTIHCRNDIFIDLITHL 82
          PMGGLTI C  D FI++ + L
Sbjct: 68 PMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of Sed0008920.1 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          MGLRQLLKRNQGVSA+PKG+CAVYVGESQKKRF I I+YLNQPCFQELLCQ EEEFGY+H
Sbjct: 1  MGLRQLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEEFGYYH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHCR+DIF DLI+ LNDL
Sbjct: 61 PMGGLTIHCRDDIFTDLISRLNDL 84

[Close]

BLAST of Sed0008920.1 vs. ExPASy TrEMBL
Match: A0A5A7U363 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00540 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 68/84 (80.95%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          M LR LLKRN+GVSA+PKG+CAVYVG+SQKKRF I IAYLN+PCFQELLCQTEEEFGY+H
Sbjct: 1  MRLRHLLKRNEGVSAVPKGYCAVYVGQSQKKRFMIPIAYLNRPCFQELLCQTEEEFGYYH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHCR+DIF + I+H+NDL
Sbjct: 61 PMGGLTIHCRDDIFAEFISHMNDL 84

[Close]

BLAST of Sed0008920.1 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.5e-34
Identity = 68/84 (80.95%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          M L+ LLKRNQGVSA+PKG+CAVYVGESQKKRF I I YLN+PCFQ+LLCQTEEEFGY+H
Sbjct: 1  MRLQHLLKRNQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEEFGYYH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHCR+DIF DLI+++NDL
Sbjct: 61 PMGGLTIHCRDDIFTDLISNMNDL 84

[Close]

BLAST of Sed0008920.1 vs. ExPASy TrEMBL
Match: A0A0A0K5U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          M L  LLKR+QGVS+IPKG+CAVYVGESQKKRF I I+YLNQPCFQELL QTEEEFGYHH
Sbjct: 1  MRLIHLLKRSQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEEFGYHH 60

Query: 61 PMGGLTIHCRNDIFIDLITHLNDL 85
          PMGGLTIHC++ IF +LI+ LNDL
Sbjct: 61 PMGGLTIHCKDAIFTNLISRLNDL 84

[Close]

BLAST of Sed0008920.1 vs. ExPASy TrEMBL
Match: A0A0A0K5V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.3e-28
Identity = 62/88 (70.45%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 1  MGLRQLLKR-----NQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEE 60
          MGLR+LL+R     NQ VS +PKG+CAVYVGE+QKKRF I I YLNQPCFQ+LL QT EE
Sbjct: 1  MGLRRLLRRSSMNGNQRVSMVPKGYCAVYVGENQKKRFVIPITYLNQPCFQDLLNQTTEE 60

Query: 61 FGYHHPMGGLTIHCRNDIFIDLITHLND 84
          F Y+HPMGGLT HC +DIF DLI+HLN+
Sbjct: 61 FEYYHPMGGLTFHCSDDIFADLISHLNE 88

[Close]

BLAST of Sed0008920.1 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-22
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MGLRQLLKRNQGV-SAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYH 60
          +G +++L R+ G  SA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRNDIFIDLITHL 82
          HPMGGLTI C  D FI++ + L
Sbjct: 68 HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Sed0008920.1 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 5.1e-22
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYH 60
          +G +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++E+EFG+ 
Sbjct: 8  LGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFD 67

Query: 61 HPMGGLTIHCRNDIFIDLITHL 82
          HPMGGLTI C  D FI++ + L
Sbjct: 68 HPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of Sed0008920.1 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-21
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 1  MGLRQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYH 60
          +G +++L R+    SA PKG  AVYVGESQKKR+ + I+YLNQP FQ LL ++EEEFG+ 
Sbjct: 8  LGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 67

Query: 61 HPMGGLTIHCRNDIFIDL 78
          HPMGGLTI C  D FI++
Sbjct: 68 HPMGGLTIPCPEDTFINV 85

[Close]

BLAST of Sed0008920.1 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-21
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 4  RQLLKRN-QGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHHPM 63
          +++L R+   VSA PKG  AVYVGESQKKR+ + ++YLNQP FQ LL ++EEEFG+ HPM
Sbjct: 11 KKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPM 70

Query: 64 GGLTIHCRNDIFIDLITHLN 83
          GGLTI C  D FI++ + L+
Sbjct: 71 GGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of Sed0008920.1 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.8 bits (242), Expect = 4.3e-21
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0


Query: 1  MGLRQLLKRNQGVSAIPKGHCAVYVGESQKKRFFILIAYLNQPCFQELLCQTEEEFGYHH 60
          +G +++L R+   SA PKG  AVYVGESQKKR+ + ++YL+QP FQ LL ++EEEFG+ H
Sbjct: 8  LGAKKILSRST-ASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 67

Query: 61 PMGGLTIHCRNDIFIDLITHL 82
          PMGGLTI C  D FI++ + L
Sbjct: 68 PMGGLTIPCPEDTFINVTSRL 87

The following BLAST results are available for this feature:

BLAST of Sed0008920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136192.1	3.4e-36	86.90	auxin-responsive protein SAUR24-like [Momordica charantia]	[more]
KAA0049710.1	2.5e-34	80.95	auxin-induced protein 15A-like [Cucumis melo var. makuwa]	[more]
XP_011658582.1	2.5e-31	79.76	auxin-responsive protein SAUR24 [Cucumis sativus]	[more]
KAE8645660.1	5.7e-31	82.28	hypothetical protein Csa_020551 [Cucumis sativus]	[more]
KAG6572089.1	7.9e-25	65.52	Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0008920.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	2.5e-21	57.32	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF7	7.2e-21	56.10	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG0	2.7e-20	58.97	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF6	4.7e-20	57.50	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJF9	6.1e-20	55.56	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of Sed0008920.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4W2	1.7e-36	86.90	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5A7U363	1.2e-34	80.95	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0K4K1	4.5e-34	80.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1	[more]
A0A0A0K5U4	1.2e-31	79.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009070 PE=3 SV=1	[more]
A0A0A0K5V1	6.3e-28	70.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009120 PE=3 SV=1	[more]

BLAST of Sed0008920.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18080.1	1.8e-22	57.32	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	5.1e-22	56.10	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.9e-21	58.97	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	3.3e-21	57.50	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	4.3e-21	55.56	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..79 e-value: 2.5E-21 score: 75.6
None	No IPR available	PANTHER	PTHR31929:SF102	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 7..82
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 7..82

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0008920	Sed0008920	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0008920.1-three_prime_utr	Sed0008920.1-three_prime_utr-LG04:47040636..47040715	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0008920.1-exon	Sed0008920.1-exon-LG04:47040636..47041053	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0008920.1-cds	Sed0008920.1-cds-LG04:47040716..47040970	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0008920.1-five_prime_utr	Sed0008920.1-five_prime_utr-LG04:47040971..47041053	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0008920.1	Sed0008920.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin