Sed0006448.1 (mRNA) Chayote v1

Overview


Name	Sed0006448.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Protein DEEPER ROOTING 1
Location	LG09: 39896319 .. 39899183 (-)
Sequence length	777
RNA-Seq Expression	Sed0006448.1
Synteny	Sed0006448.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGAGCTTAATCTTCATGTTGTGTTATTAGTGTACTATTTTGTCCTCAACGGGCAACCCAGCGGTTGAGACTAAGGACTTCAAGGCATGCTTCCTTGAGAGATCACTGATTCGAGGCCGCTGGAAAGCACTTAAACTAGAATACCCTTCGAAGTATCTCGGTGCCACAGTCTAGGGACGGGCCAGTGGTGCCTTGGGTATAGGAGAGCGAAGCTCCGAGTACTATTCTTCTTTTTATTCGATAACATTTGAGGAAGGAAGATTTGAAGTTGTAACCGCATGATGCCGCTCGAGTTCTGTTCTTGTTAGTTTATGTGGTGTAGTGTAGTTTGAATGGAAGCTTAGACTTTTTTTTAAAACTTCATTTGTTCAATGCAGTTCTTGAGCTGGATGCAGAATAAACTAAATGGCAGAAATGAGAAGAAAATCCCAGATACATTCTCTACTTCTGGTAAGCTCTCTTCTCTTCTTTTTTTTTTCTCTCTTTTCCTCTATCTTATCACTTTTTAATCCTCTATGTTTCAAACGGGTGTATGTTCGGGTCATTTTACGTGCACTTTGACTATTTTTAGTGACTCAACAGTATTTGGTTGTCAAGAAAACCCGTAAAAAAATTAATTACCATGGATTAAACCTATAATTTGTTAGTTTTTTAGACTCTCTTCGCCATTAGACTGATCCATGATGATTTTATAAAATGGATAATATTATATCAATGTAGATCTAAAAAGGGTCGTTGTCCCTTACAATATTTATAGATGAATTTTTTTAGGGTCTAAACTAGCTTATCAGGTAAACTGTGGAAAATAGAATTAGTGAAAAATAGTTTTTTGGTTGGATCCAAAATTTAGTTTGGTGGATCAAAATCCCAATGCAAATGAGGACATGATTCAAAAGGTAACCACAATCACCAACCTCAAGACTTGGGTCCATGTGCCTAGTTCCCTCAACCAAATATTTTATGCACAAAATTTACCATTGTTTTACATTTCCTGTTTTGTGCAAATCAACATTAATCAGATACATAGGAGACCGTGTTTGGAGGCGTTCATGAAACCGGGAGTTGAGTTATTATAATCCAACCCACGTTTGACCCACATGTTATAACAACCGTTGGATTGACTCAAACCTAAGCTATTGTTTACCTAACTTTCATCGCCGTTTCACATAACTCATGTCCTATTTGAGATTAATCAATAAGATCTTGGGGAGATAAAAGGTGATGGGTTCAATCCATGACGGTCATCTACATATGAATTAATTTTTTACGAGTTTCCTTGACATCAAAATGTTGTAGGGTCAGATGGTATATCTTGTTACATTAGTTGAGATGTTCGTAAACTGACCCAAAAAGTCACGGTCACGGATATATTAAAAAAAATATTTCTTATTCCTCTGTTATAATAACATGCACCCCAAATGTTATTTATCATAATTCATGTTATAATAACGTGCACTTCAAACACCATTTATTATAATCTATTTTATAATAACATACCTTTCAAATACAGTCTGCTATTTAGAGTAACCACGGTTTATAGTAATCCAACCACTCCTATTTTTACTTTATGATCACATTCTTTTTAGTTTCATATTCTTTTAAATTGAATATGTTCCATTCCATTTTCCAATTTACAGAGCATAAAAAACAAGAGTCTAGAGAAGAGTTCAGCCATTGGCCTCATGAGTTGCTTGCAATTGGAACTTTTGGCAACAATGAGATCAAACAAGACAAACAGGAGGATCCAACTTCTTCAGAAGAGATAGCAGATTTCTCTCCTGAAGAAGTTGGCAAATTACAGAGAGAGTTGACAAAGCTTCTATCTCGAAAACCGAATCCCGAAAAACAGGTTGAAGATCTTCCATTGGATAGATTTCTCAACTGTCCCTCAAGCTTGGAGGTTGACAGGAGAATCAGCAATCCACTTAGCTGTGATTCTGATGATAAAGATGAAGATATTGAAAGAACCATCAGTCTTATAATTGGCAAATGTAAGGACATTTGCGCCGATCGTAAAACGAAAGCGATCGGGAAGAAATCGATCTCATTTCTGCTGAAGAAGTTGTTTGTTTGTAGTAATGGATTTAATCCTATGCCACCACCAAGTTTGAAAGAAACTCTACATGAGTCAAGAATGGAAAAGGTAAAAAAGCTTCTTCAATTCTGATTTATGCTGCATAATTTCAGCTTTTGAAACTGATGATCTTTCCATTTCAATGGCAGCTTTTGAGAACAATTCTCCTAAAGAAGACCGCCCCGCAAAACGGTTCTCGAGCGTCCTCGTTGAAGAGGTACATCGAGGAAAAACCATCAGCAAAAAGCAGCAACGAAGGAGGAGAAGAAGAGCAGAAAAATGCAAAAGATGGATCCAAATGGGTCAAAACTGATTCTGAGTGTAAGTTCACAACTTCATATGTAGGGGTGTATAAACCGAACAATTCGAACTATCCAACCCAAACGTAAGAATTGAGTTGAGTTGGGATATAACTTTTTTGGGTTAAGTCGATTCTTGGGAAGGCCAGTTTGATTCAGTTCAATCCAACTTAATACAGTTTAGGTTCAAGTCTATAGATTTATAGGCTATAGGCTTAATATTAAAGAGGACAGAAGATATAGACACATCCCGATAACTCAACTCAACCAAAAAAATTATGAGTTGGGTTGGTCTGATACATAGGGTCGGACAGATTTGTAGATTGACCTACTCGAAAATTCGAGTTAATCCAAAAAAAATTCTTAACTCAATCCAACTCAGACGATGTACCCCTGTTATATTATATGTACATAAATCCATTAAAAACATCAGCATTCTAACAAGCCCTTGTTTAACAAATTGCAGACATTGTTCTTGAGATATAA

mRNA sequence

ATGAAGTTCTTGAGCTGGATGCAGAATAAACTAAATGGCAGAAATGAGAAGAAAATCCCAGATACATTCTCTACTTCTGAGCATAAAAAACAAGAGTCTAGAGAAGAGTTCAGCCATTGGCCTCATGAGTTGCTTGCAATTGGAACTTTTGGCAACAATGAGATCAAACAAGACAAACAGGAGGATCCAACTTCTTCAGAAGAGATAGCAGATTTCTCTCCTGAAGAAGTTGGCAAATTACAGAGAGAGTTGACAAAGCTTCTATCTCGAAAACCGAATCCCGAAAAACAGGTTGAAGATCTTCCATTGGATAGATTTCTCAACTGTCCCTCAAGCTTGGAGGTTGACAGGAGAATCAGCAATCCACTTAGCTGTGATTCTGATGATAAAGATGAAGATATTGAAAGAACCATCAGTCTTATAATTGGCAAATGTAAGGACATTTGCGCCGATCGTAAAACGAAAGCGATCGGGAAGAAATCGATCTCATTTCTGCTGAAGAAGTTGTTTGTTTGTAGTAATGGATTTAATCCTATGCCACCACCAAGTTTGAAAGAAACTCTACATGAGTCAAGAATGGAAAAGCTTTTGAGAACAATTCTCCTAAAGAAGACCGCCCCGCAAAACGGTTCTCGAGCGTCCTCGTTGAAGAGGTACATCGAGGAAAAACCATCAGCAAAAAGCAGCAACGAAGGAGGAGAAGAAGAGCAGAAAAATGCAAAAGATGGATCCAAATGGGTCAAAACTGATTCTGAGTACATTGTTCTTGAGATATAA

Coding sequence (CDS)

ATGAAGTTCTTGAGCTGGATGCAGAATAAACTAAATGGCAGAAATGAGAAGAAAATCCCAGATACATTCTCTACTTCTGAGCATAAAAAACAAGAGTCTAGAGAAGAGTTCAGCCATTGGCCTCATGAGTTGCTTGCAATTGGAACTTTTGGCAACAATGAGATCAAACAAGACAAACAGGAGGATCCAACTTCTTCAGAAGAGATAGCAGATTTCTCTCCTGAAGAAGTTGGCAAATTACAGAGAGAGTTGACAAAGCTTCTATCTCGAAAACCGAATCCCGAAAAACAGGTTGAAGATCTTCCATTGGATAGATTTCTCAACTGTCCCTCAAGCTTGGAGGTTGACAGGAGAATCAGCAATCCACTTAGCTGTGATTCTGATGATAAAGATGAAGATATTGAAAGAACCATCAGTCTTATAATTGGCAAATGTAAGGACATTTGCGCCGATCGTAAAACGAAAGCGATCGGGAAGAAATCGATCTCATTTCTGCTGAAGAAGTTGTTTGTTTGTAGTAATGGATTTAATCCTATGCCACCACCAAGTTTGAAAGAAACTCTACATGAGTCAAGAATGGAAAAGCTTTTGAGAACAATTCTCCTAAAGAAGACCGCCCCGCAAAACGGTTCTCGAGCGTCCTCGTTGAAGAGGTACATCGAGGAAAAACCATCAGCAAAAAGCAGCAACGAAGGAGGAGAAGAAGAGCAGAAAAATGCAAAAGATGGATCCAAATGGGTCAAAACTGATTCTGAGTACATTGTTCTTGAGATATAA

Protein sequence

MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIKQDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLEVDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSNGFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSNEGGEEEQKNAKDGSKWVKTDSEYIVLEI

Homology

[Close]

BLAST of Sed0006448.1 vs. NCBI nr
Match: XP_022964145.1 (uncharacterized protein LOC111464259 [Cucurbita moschata])

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-115
Identity = 226/265 (85.28%), Postives = 236/265 (89.06%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIK---- 60
           MKF SWMQ KLNGR+EKKIP+TFSTS+ KKQESREEFS WPH LLAIGTFGNNEIK    
Sbjct: 1   MKFFSWMQTKLNGRHEKKIPNTFSTSQLKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  --QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
             QD QEDP+SSEEI DFSPEEVGKLQ+ELTKLLSRKPNPEKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRQDIQEDPSSSEEIIDFSPEEVGKLQKELTKLLSRKPNPEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD K KAIGKKS+SFLLKKLFVC N
Sbjct: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSVSFLLKKLFVCRN 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSR-ASSLKRYIEEKPSAKSSNEGG 240
           GF P+PPPSL+ETL ESRMEKLLRTIL KK APQN SR +SSLKRYIEEK S K+ NE  
Sbjct: 181 GFTPIPPPSLRETLQESRMEKLLRTILQKKIAPQNASRSSSSLKRYIEEKQSPKNRNEAE 240

Query: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 259
           EEE KNAKDGSKWVKTDSEYIVLEI
Sbjct: 241 EEEHKNAKDGSKWVKTDSEYIVLEI 265

[Close]

BLAST of Sed0006448.1 vs. NCBI nr
Match: XP_023515105.1 (uncharacterized protein LOC111779233 [Cucurbita pepo subsp. pepo] >XP_023515106.1 uncharacterized protein LOC111779233 [Cucurbita pepo subsp. pepo] >XP_023515107.1 uncharacterized protein LOC111779233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.4 bits (1095), Expect = 1.8e-115
Identity = 226/265 (85.28%), Postives = 236/265 (89.06%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIK---- 60
           MKF SWMQ KLNGR+E KIP+TFSTS+ KKQESREEFS WPH LLAIGTFGNNEIK    
Sbjct: 1   MKFFSWMQTKLNGRHETKIPNTFSTSQLKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  --QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
             QD QEDP+SSEEI DFSPEEVGKLQ+ELTKLLSRKPNPEKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRQDIQEDPSSSEEIIDFSPEEVGKLQKELTKLLSRKPNPEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD K KAIGKKS+SFLLKKLFVC N
Sbjct: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSVSFLLKKLFVCRN 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSR-ASSLKRYIEEKPSAKSSNEGG 240
           GF P+PPPSL+ETL ESRMEKLLRTIL KK APQN SR +SSLKRYIEEK S K+ NE  
Sbjct: 181 GFTPIPPPSLRETLQESRMEKLLRTILQKKIAPQNASRSSSSLKRYIEEKQSPKNRNEAE 240

Query: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 259
           EEEQKNAKDGSKWVKTDSEYIVLEI
Sbjct: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 265

[Close]

BLAST of Sed0006448.1 vs. NCBI nr
Match: KAG6593560.1 (hypothetical protein SDJN03_13036, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 425.2 bits (1092), Expect = 3.9e-115
Identity = 225/265 (84.91%), Postives = 236/265 (89.06%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIK---- 60
           MKF SWMQ KLNGR+EKKIP+TFS+S+ KKQESREEFS WPH LLAIGTFGNNEIK    
Sbjct: 1   MKFFSWMQTKLNGRHEKKIPNTFSSSQLKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  --QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
             QD QEDP+SSEEI DFSPEEVGKLQ+ELTKLLSRKPNPEKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRQDIQEDPSSSEEIIDFSPEEVGKLQKELTKLLSRKPNPEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD K KAIGKKS+SFLLKKLFVC N
Sbjct: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSVSFLLKKLFVCRN 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSR-ASSLKRYIEEKPSAKSSNEGG 240
           GF P+PPPSL+ETL ESRMEKLLRTIL KK APQN SR +SSLKRYIEEK S K+ NE  
Sbjct: 181 GFTPIPPPSLRETLQESRMEKLLRTILQKKIAPQNASRSSSSLKRYIEEKQSPKNRNEAE 240

Query: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 259
           EEE KNAKDGSKWVKTDSEYIVLEI
Sbjct: 241 EEEHKNAKDGSKWVKTDSEYIVLEI 265

[Close]

BLAST of Sed0006448.1 vs. NCBI nr
Match: XP_022999979.1 (uncharacterized protein LOC111494303 [Cucurbita maxima])

HSP 1 Score: 424.9 bits (1091), Expect = 5.1e-115
Identity = 225/265 (84.91%), Postives = 236/265 (89.06%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIK---- 60
           MKF SWMQ KLNGR+EKKIP+TFSTS+ KKQESREEFS WPH LLAIGTFGNNEIK    
Sbjct: 1   MKFFSWMQTKLNGRHEKKIPNTFSTSQLKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  --QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
             QD QEDP+SSEEI DFSPEEVGKLQ+ELTKLLSRKPNPEKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRQDIQEDPSSSEEIIDFSPEEVGKLQKELTKLLSRKPNPEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD K KAIGKKS+SFLLKKLFVC N
Sbjct: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSVSFLLKKLFVCRN 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSR-ASSLKRYIEEKPSAKSSNEGG 240
           GF P+PPPSL+ETL ESRMEKLLRTIL KK APQN SR +SSLKRYIE K S K+ NE  
Sbjct: 181 GFTPIPPPSLRETLQESRMEKLLRTILQKKIAPQNASRSSSSLKRYIEVKQSPKNRNEAE 240

Query: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 259
           EEEQ+NAKDGSKWVKTDSEYIVLEI
Sbjct: 241 EEEQRNAKDGSKWVKTDSEYIVLEI 265

[Close]

BLAST of Sed0006448.1 vs. NCBI nr
Match: XP_038899524.1 (protein DEEPER ROOTING 1 [Benincasa hispida])

HSP 1 Score: 422.9 bits (1086), Expect = 1.9e-114
Identity = 220/264 (83.33%), Postives = 235/264 (89.02%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIKQD-- 60
           MKFLSWMQ KLNG+ EKKIPDT STS+HKKQESREEFS WPH LLAIGTFGNNEIK D  
Sbjct: 1   MKFLSWMQTKLNGKQEKKIPDTLSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  ----KQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
               ++E+P+SSEEI DFSPEEVGKLQ+ELTKLLSRKPN EKQV DLPLDRFLNCPSSLE
Sbjct: 61  RQDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPL  DSDDKDEDIERTISLIIGKCKDICAD K KAIGKKSISFLLKKLFVC  
Sbjct: 121 VDRRISNPLCSDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSISFLLKKLFVCRT 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSNEGGE 240
           GF PMPPPSL+ETL ESRMEKLLRTIL KK +PQN SR+SSLKRYIEEK SAK+ N+G E
Sbjct: 181 GFTPMPPPSLRETLQESRMEKLLRTILQKKISPQNASRSSSLKRYIEEKQSAKNRNDGEE 240

Query: 241 EEQKNAKDGSKWVKTDSEYIVLEI 259
           +++KNAKDGSKWVKTDSEYIVLEI
Sbjct: 241 DQKKNAKDGSKWVKTDSEYIVLEI 264

[Close]

BLAST of Sed0006448.1 vs. ExPASy Swiss-Prot
Match: A0A072TLV8 (Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN=NGR PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.7e-84
Identity = 170/266 (63.91%), Postives = 208/266 (78.20%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFG-NNEIKQD- 60
           MKF +WMQNKL G+ E +  +T +++ + K E REEFS WPH LLAIGTFG NNEI Q+ 
Sbjct: 1   MKFFNWMQNKLGGKQENRKSNTSTSTTYAKPEPREEFSDWPHSLLAIGTFGNNNEITQNI 60

Query: 61  -----KQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSL 120
                +QEDP+SSEE+ DF+PEE+GKLQ+ELT+LL RKPN EK++ +LPLDRFLNCPSSL
Sbjct: 61  ENQNTQQEDPSSSEEVPDFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPSSL 120

Query: 121 EVDRRISNPLSCDS-DDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVC 180
           EVDRRISN L  +S  DKDEDIE+T+S+I+ KCKDICA++  K+IGKKSISFLLKK+FVC
Sbjct: 121 EVDRRISNALCSESGGDKDEDIEKTLSVILDKCKDICAEKSKKSIGKKSISFLLKKMFVC 180

Query: 181 SNGFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSNEG 240
            +GF   P PSL++TL ESRMEKLLRT+L KK   QN SRA  LK+ +E K S K  NE 
Sbjct: 181 RSGF--APTPSLRDTLQESRMEKLLRTMLHKKLYTQNNSRAPVLKKCLENKKSIKKRNE- 240

Query: 241 GEEEQKNAKDGSKWVKTDSEYIVLEI 259
            +E ++   +GSKWVKTDSEYIVLEI
Sbjct: 241 -DEAEERIDEGSKWVKTDSEYIVLEI 262

[Close]

BLAST of Sed0006448.1 vs. ExPASy Swiss-Prot
Match: A0A251PW43 (Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.4e-83
Identity = 176/271 (64.94%), Postives = 208/271 (76.75%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEH-KKQESREEFSHWPHELLAIGTFGNNEIK--- 60
           MK   WMQNKLNG+   K P+T   + H  KQE REEFS WPH LLAIGTFGNN++K   
Sbjct: 1   MKLFGWMQNKLNGKQGNKKPNTVPITTHPAKQEPREEFSDWPHGLLAIGTFGNNDLKENA 60

Query: 61  ---QDKQEDPTSSEEIAD-FSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSS 120
              QD QEDPTSSEEI D F+PEEVGKL +ELTKLL+RKPN EK++ DLPLDRFLNCPSS
Sbjct: 61  AESQDIQEDPTSSEEILDNFTPEEVGKLHKELTKLLTRKPNIEKEIADLPLDRFLNCPSS 120

Query: 121 LEVDRRISNPLSCDS--DDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLF 180
           LEVDRR SN L  DS  D KDEDIE+TIS+I+G+CK+IC D+  KAIGKKSISFLLKK+F
Sbjct: 121 LEVDRRNSNALCSDSADDHKDEDIEKTISVILGRCKEICGDKNKKAIGKKSISFLLKKMF 180

Query: 181 VCSNGFNPMPPPSLKETLHESRMEKLLRTILLKKTA-PQNGSRASSLKRYIEEK--PSAK 240
           VC +GF   P PSL++TL ESRMEKLLR +L KK   PQ  SRA+S+K+Y+E++  P+ K
Sbjct: 181 VCRSGF--APQPSLRDTLQESRMEKLLRVMLNKKIINPQGSSRAASMKKYLEDRQIPTKK 240

Query: 241 SSNEGGEEEQKNAKDGSKWVKTDSEYIVLEI 259
            SN   + ++K   +G KWVKTDSEYIVLEI
Sbjct: 241 ESNTEDDTKEK-INNGCKWVKTDSEYIVLEI 268

[Close]

BLAST of Sed0006448.1 vs. ExPASy Swiss-Prot
Match: Q58G53 (Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.8e-63
Identity = 146/296 (49.32%), Postives = 196/296 (66.22%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFG-------NN 60
           MKF  WMQNKLNG +  +   + ++S H KQE REEFS WPH LLAIGTFG        N
Sbjct: 1   MKFFGWMQNKLNG-DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVSEN 60

Query: 61  EIK---------------QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQV 120
           E K                +++E+P+SS  + DF+PEEVGKLQ+EL KLLSR    +  V
Sbjct: 61  ESKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTKKRKSDV 120

Query: 121 -----EDLPLDRFLNCPSSLEVDRRISNPLSC----DSDDKDEDIERTISLIIGKCKDIC 180
                ++LPLDRFLNCPSSLEVDRRISN LS       ++K+ED+ERTI++I+G+CK+I 
Sbjct: 121 NRELMKNLPLDRFLNCPSSLEVDRRISNALSAVVDSSEENKEEDMERTINVILGRCKEIS 180

Query: 181 AD----RKTKAIGKKSISFLLKKLFVCSNGFNPMPPPSLKETLHESRMEKLLRTILLKKT 240
            +    +K + I K S+S+L KK+FVC++G +  P PSL++TL ESRMEKLL+ +L KK 
Sbjct: 181 IESKNNKKKRDISKNSVSYLFKKIFVCADGISTAPSPSLRDTLQESRMEKLLKMMLHKKI 240

Query: 241 APQNGSRASSL--KRYIEEKPSAKSSNEGGE-EEQKNAKDGSKWVKTDSEYIVLEI 259
             Q  S+ +SL  KRY+++K      +E  E  E++++ DG KWVKTDS++IVLEI
Sbjct: 241 NAQASSKPTSLTTKRYLQDKKQLSLKSEEEETSERRSSSDGYKWVKTDSDFIVLEI 295

[Close]

BLAST of Sed0006448.1 vs. ExPASy Swiss-Prot
Match: Q5XVG3 (Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-62
Identity = 144/294 (48.98%), Postives = 189/294 (64.29%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNE------ 60
           MKF  WMQNKL+G+ E  I    S S       REEF+ WPH LLAIGTFGN +      
Sbjct: 1   MKFFGWMQNKLHGKQE--ITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTL 60

Query: 61  ------------------IKQDKQEDPTSSEEI-ADFSPEEVGKLQRELTKLLS-----R 120
                               QD  ++ +SS+++  DF+PEEVGKLQ+ELTKLL+     R
Sbjct: 61  DQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSKKR 120

Query: 121 KPNPEKQVEDLPLDRFLNCPSSLEVDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICA 180
           K +  +++ +LPLDRFLNCPSSLEVDRRISN L    D+K+EDIERTIS+I+G+CK I  
Sbjct: 121 KSDVNRELANLPLDRFLNCPSSLEVDRRISNAL---CDEKEEDIERTISVILGRCKAIST 180

Query: 181 DRKTKA------IGKKSISFLLKKLFVCSNGFNPMPPPSLKETLHESRMEKLLRTILLKK 240
           + K K       + K S+S LLKK+FVC+ GF+P+P P L++T  E+RMEKLLR +L KK
Sbjct: 181 ESKNKTKKNKRDLSKTSVSHLLKKMFVCTEGFSPVPRPILRDTFQETRMEKLLRMMLHKK 240

Query: 241 TAPQNGSRASSLKRYIEEKPSAKSSNEGGEEEQKNAKDGSKWVKTDSEYIVLEI 259
              Q  S+ +S K+Y+++K      NE  EEE +++ DG KWVKTDS++IVLEI
Sbjct: 241 VNTQASSKQTSTKKYLQDKQQLSLKNE--EEEGRSSNDGGKWVKTDSDFIVLEI 287

[Close]

BLAST of Sed0006448.1 vs. ExPASy Swiss-Prot
Match: Q69P88 (Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 95/269 (35.32%), Postives = 146/269 (54.28%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQES---REEFSHWPHELLAIGTFGNNEIKQ 60
           MK  SW+ NK++G+ E       S++ ++   S   ++EFS WP  LLAIGTFGN +I++
Sbjct: 1   MKIFSWVANKISGKQEANRFPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGNKQIEE 60

Query: 61  DKQEDPTSS-----EEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSS 120
             Q + +S      ++   F+ EEV K+++E   LL+ K   E Q               
Sbjct: 61  VAQVENSSDNVQSVQDTVKFTEEEVDKIRKEFETLLAIKDQAEAQ--------------R 120

Query: 121 LEVDRRISNPLSCDSDDKDEDIERTIS--LIIGKCKDICADRKTKAIGKKSISFLLKKLF 180
              D ++      D +D ++ I + I+  +I+ K K+    +K   +  +S++ LL KLF
Sbjct: 121 SHDDDQVGLQKRADGEDNEKHIRQLINKRIIVSKSKN-SLGKKGNTLKPRSVASLL-KLF 180

Query: 181 VCSNGFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSN 240
           +C  GF  + P   + T  +SRMEKLL+ IL KK  PQN S   + KR+++ KP     N
Sbjct: 181 MCKGGFTSVVPEP-RNTFPQSRMEKLLKAILQKKIHPQNSSTLVA-KRHLDWKPDETEIN 240

Query: 241 EGGEEEQKNA-KDGSKWVKTDSEYIVLEI 259
           E  E+  ++   DG+KWVKTDSEYIVLE+
Sbjct: 241 ECLEDALRDLDDDGAKWVKTDSEYIVLEM 251

[Close]

BLAST of Sed0006448.1 vs. ExPASy TrEMBL
Match: A0A6J1HK02 (uncharacterized protein LOC111464259 OS=Cucurbita moschata OX=3662 GN=LOC111464259 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.5e-116
Identity = 226/265 (85.28%), Postives = 236/265 (89.06%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIK---- 60
           MKF SWMQ KLNGR+EKKIP+TFSTS+ KKQESREEFS WPH LLAIGTFGNNEIK    
Sbjct: 1   MKFFSWMQTKLNGRHEKKIPNTFSTSQLKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  --QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
             QD QEDP+SSEEI DFSPEEVGKLQ+ELTKLLSRKPNPEKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRQDIQEDPSSSEEIIDFSPEEVGKLQKELTKLLSRKPNPEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD K KAIGKKS+SFLLKKLFVC N
Sbjct: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSVSFLLKKLFVCRN 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSR-ASSLKRYIEEKPSAKSSNEGG 240
           GF P+PPPSL+ETL ESRMEKLLRTIL KK APQN SR +SSLKRYIEEK S K+ NE  
Sbjct: 181 GFTPIPPPSLRETLQESRMEKLLRTILQKKIAPQNASRSSSSLKRYIEEKQSPKNRNEAE 240

Query: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 259
           EEE KNAKDGSKWVKTDSEYIVLEI
Sbjct: 241 EEEHKNAKDGSKWVKTDSEYIVLEI 265

[Close]

BLAST of Sed0006448.1 vs. ExPASy TrEMBL
Match: A0A6J1KIM3 (uncharacterized protein LOC111494303 OS=Cucurbita maxima OX=3661 GN=LOC111494303 PE=3 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.5e-115
Identity = 225/265 (84.91%), Postives = 236/265 (89.06%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIK---- 60
           MKF SWMQ KLNGR+EKKIP+TFSTS+ KKQESREEFS WPH LLAIGTFGNNEIK    
Sbjct: 1   MKFFSWMQTKLNGRHEKKIPNTFSTSQLKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  --QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
             QD QEDP+SSEEI DFSPEEVGKLQ+ELTKLLSRKPNPEKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRQDIQEDPSSSEEIIDFSPEEVGKLQKELTKLLSRKPNPEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD K KAIGKKS+SFLLKKLFVC N
Sbjct: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSVSFLLKKLFVCRN 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSR-ASSLKRYIEEKPSAKSSNEGG 240
           GF P+PPPSL+ETL ESRMEKLLRTIL KK APQN SR +SSLKRYIE K S K+ NE  
Sbjct: 181 GFTPIPPPSLRETLQESRMEKLLRTILQKKIAPQNASRSSSSLKRYIEVKQSPKNRNEAE 240

Query: 241 EEEQKNAKDGSKWVKTDSEYIVLEI 259
           EEEQ+NAKDGSKWVKTDSEYIVLEI
Sbjct: 241 EEEQRNAKDGSKWVKTDSEYIVLEI 265

[Close]

BLAST of Sed0006448.1 vs. ExPASy TrEMBL
Match: A0A1S3CH46 (uncharacterized protein LOC103500678 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500678 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.9e-113
Identity = 218/264 (82.58%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIKQD-- 60
           MKF SWMQ KLNG+ EKKIPDT STS HKKQESREEFS WPH LLAIGTFGNNEIK D  
Sbjct: 1   MKFFSWMQTKLNGKQEKKIPDTISTSHHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  ----KQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
               ++E+P+SSEEI DFSPEEVGKLQ+ELTKLLSRKPN EKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLS DSDDKDEDIERTISLIIGKCKDICAD K KAIGKKSISFLLKKLFVC  
Sbjct: 121 VDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSISFLLKKLFVCRT 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSNEGGE 240
           GF PMPPPSL+ETL ESRMEKLLRTIL KK +PQN SR+SSLKRYIEEK SAK+ N+  E
Sbjct: 181 GFTPMPPPSLRETLQESRMEKLLRTILQKKISPQNASRSSSLKRYIEEKQSAKNRNDEEE 240

Query: 241 EEQKNAKDGSKWVKTDSEYIVLEI 259
           +++K+AKDGSKWVKTDSEYIVLEI
Sbjct: 241 DQKKHAKDGSKWVKTDSEYIVLEI 264

[Close]

BLAST of Sed0006448.1 vs. ExPASy TrEMBL
Match: A0A5A7UYW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001370 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.1e-112
Identity = 217/264 (82.20%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIKQD-- 60
           M+F SWMQ KLNG+ EKKIPDT STS HKKQESREEFS WPH LLAIGTFGNNEIK D  
Sbjct: 1   MQFFSWMQTKLNGKQEKKIPDTISTSHHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  ----KQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
               ++E+P+SSEEI DFSPEEVGKLQ+ELTKLLSRKPN EKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLS DSDDKDEDIERTISLIIGKCKDICAD K KAIGKKSISFLLKKLFVC  
Sbjct: 121 VDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSISFLLKKLFVCRT 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSNEGGE 240
           GF PMPPPSL+ETL ESRMEKLLRTIL KK +PQN SR+SSLKRYIEEK SAK+ N+  E
Sbjct: 181 GFTPMPPPSLRETLQESRMEKLLRTILQKKISPQNASRSSSLKRYIEEKQSAKNRNDEEE 240

Query: 241 EEQKNAKDGSKWVKTDSEYIVLEI 259
           +++K+AKDGSKWVKTDSEYIVLEI
Sbjct: 241 DQKKHAKDGSKWVKTDSEYIVLEI 264

[Close]

BLAST of Sed0006448.1 vs. ExPASy TrEMBL
Match: A0A1S3CI43 (uncharacterized protein LOC103500678 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500678 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.1e-112
Identity = 217/264 (82.20%), Postives = 233/264 (88.26%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNEIKQD-- 60
           M+F SWMQ KLNG+ EKKIPDT STS HKKQESREEFS WPH LLAIGTFGNNEIK D  
Sbjct: 1   MQFFSWMQTKLNGKQEKKIPDTISTSHHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  ----KQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQVEDLPLDRFLNCPSSLE 120
               ++E+P+SSEEI DFSPEEVGKLQ+ELTKLLSRKPN EKQV DLPLDRFLNCPSSLE
Sbjct: 61  RRDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICADRKTKAIGKKSISFLLKKLFVCSN 180
           VDRRISNPLS DSDDKDEDIERTISLIIGKCKDICAD K KAIGKKSISFLLKKLFVC  
Sbjct: 121 VDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICADSKKKAIGKKSISFLLKKLFVCRT 180

Query: 181 GFNPMPPPSLKETLHESRMEKLLRTILLKKTAPQNGSRASSLKRYIEEKPSAKSSNEGGE 240
           GF PMPPPSL+ETL ESRMEKLLRTIL KK +PQN SR+SSLKRYIEEK SAK+ N+  E
Sbjct: 181 GFTPMPPPSLRETLQESRMEKLLRTILQKKISPQNASRSSSLKRYIEEKQSAKNRNDEEE 240

Query: 241 EEQKNAKDGSKWVKTDSEYIVLEI 259
           +++K+AKDGSKWVKTDSEYIVLEI
Sbjct: 241 DQKKHAKDGSKWVKTDSEYIVLEI 264

[Close]

BLAST of Sed0006448.1 vs. TAIR 10
Match: AT1G17400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 243.4 bits (620), Expect = 2.0e-64
Identity = 146/296 (49.32%), Postives = 196/296 (66.22%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFG-------NN 60
           MKF  WMQNKLNG +  +   + ++S H KQE REEFS WPH LLAIGTFG        N
Sbjct: 1   MKFFGWMQNKLNG-DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVSEN 60

Query: 61  EIK---------------QDKQEDPTSSEEIADFSPEEVGKLQRELTKLLSRKPNPEKQV 120
           E K                +++E+P+SS  + DF+PEEVGKLQ+EL KLLSR    +  V
Sbjct: 61  ESKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTKKRKSDV 120

Query: 121 -----EDLPLDRFLNCPSSLEVDRRISNPLSC----DSDDKDEDIERTISLIIGKCKDIC 180
                ++LPLDRFLNCPSSLEVDRRISN LS       ++K+ED+ERTI++I+G+CK+I 
Sbjct: 121 NRELMKNLPLDRFLNCPSSLEVDRRISNALSAVVDSSEENKEEDMERTINVILGRCKEIS 180

Query: 181 AD----RKTKAIGKKSISFLLKKLFVCSNGFNPMPPPSLKETLHESRMEKLLRTILLKKT 240
            +    +K + I K S+S+L KK+FVC++G +  P PSL++TL ESRMEKLL+ +L KK 
Sbjct: 181 IESKNNKKKRDISKNSVSYLFKKIFVCADGISTAPSPSLRDTLQESRMEKLLKMMLHKKI 240

Query: 241 APQNGSRASSL--KRYIEEKPSAKSSNEGGE-EEQKNAKDGSKWVKTDSEYIVLEI 259
             Q  S+ +SL  KRY+++K      +E  E  E++++ DG KWVKTDS++IVLEI
Sbjct: 241 NAQASSKPTSLTTKRYLQDKKQLSLKSEEEETSERRSSSDGYKWVKTDSDFIVLEI 295

[Close]

BLAST of Sed0006448.1 vs. TAIR 10
Match: AT1G72490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-63
Identity = 144/294 (48.98%), Postives = 189/294 (64.29%), Query Frame = 0


Query: 1   MKFLSWMQNKLNGRNEKKIPDTFSTSEHKKQESREEFSHWPHELLAIGTFGNNE------ 60
           MKF  WMQNKL+G+ E  I    S S       REEF+ WPH LLAIGTFGN +      
Sbjct: 1   MKFFGWMQNKLHGKQE--ITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTL 60

Query: 61  ------------------IKQDKQEDPTSSEEI-ADFSPEEVGKLQRELTKLLS-----R 120
                               QD  ++ +SS+++  DF+PEEVGKLQ+ELTKLL+     R
Sbjct: 61  DQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSKKR 120

Query: 121 KPNPEKQVEDLPLDRFLNCPSSLEVDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICA 180
           K +  +++ +LPLDRFLNCPSSLEVDRRISN L    D+K+EDIERTIS+I+G+CK I  
Sbjct: 121 KSDVNRELANLPLDRFLNCPSSLEVDRRISNAL---CDEKEEDIERTISVILGRCKAIST 180

Query: 181 DRKTKA------IGKKSISFLLKKLFVCSNGFNPMPPPSLKETLHESRMEKLLRTILLKK 240
           + K K       + K S+S LLKK+FVC+ GF+P+P P L++T  E+RMEKLLR +L KK
Sbjct: 181 ESKNKTKKNKRDLSKTSVSHLLKKMFVCTEGFSPVPRPILRDTFQETRMEKLLRMMLHKK 240

Query: 241 TAPQNGSRASSLKRYIEEKPSAKSSNEGGEEEQKNAKDGSKWVKTDSEYIVLEI 259
              Q  S+ +S K+Y+++K      NE  EEE +++ DG KWVKTDS++IVLEI
Sbjct: 241 VNTQASSKQTSTKKYLQDKQQLSLKNE--EEEGRSSNDGGKWVKTDSDFIVLEI 287

[Close]

BLAST of Sed0006448.1 vs. TAIR 10
Match: AT1G19115.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-14
Identity = 61/165 (36.97%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 92  PNPEKQVEDLPLDRFLNCPSSLEVDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD 151
           P   K+V+ LP D       +      + N +    ++++E+ + +        KDI   
Sbjct: 29  PPLSKEVQGLPQDE-----ETFLAIGTLGNNIFPKQEEEEEETDSS--------KDITPV 88

Query: 152 RKTKAIG-KKSISFLLKKLFVCSNGFNPMPP---PSLKETLHESRMEKLLRTILLKKTAP 211
                IG KKS+SFLLKK+FVC++GF   PP    S  ++LH +RMEK+LRTIL KK  P
Sbjct: 89  NTDVTIGKKKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHP 148

Query: 212 QNGSRASSLKRYIEEKPSAKSSNEGGEEEQKNAKDGSKWVKTDSE 253
           Q  +  S  K+Y+E       SN    +E +++ D +KWVKTDSE
Sbjct: 149 QRSN--SIAKKYLE-------SNHKIMDEARSSVDANKWVKTDSE 171

[Close]

BLAST of Sed0006448.1 vs. TAIR 10
Match: AT1G19115.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-14
Identity = 61/165 (36.97%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 92  PNPEKQVEDLPLDRFLNCPSSLEVDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD 151
           P   K+V+ LP D       +      + N +    ++++E+ + +        KDI   
Sbjct: 29  PPLSKEVQGLPQDE-----ETFLAIGTLGNNIFPKQEEEEEETDSS--------KDITPV 88

Query: 152 RKTKAIG-KKSISFLLKKLFVCSNGFNPMPP---PSLKETLHESRMEKLLRTILLKKTAP 211
                IG KKS+SFLLKK+FVC++GF   PP    S  ++LH +RMEK+LRTIL KK  P
Sbjct: 89  NTDVTIGKKKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHP 148

Query: 212 QNGSRASSLKRYIEEKPSAKSSNEGGEEEQKNAKDGSKWVKTDSE 253
           Q  +  S  K+Y+E       SN    +E +++ D +KWVKTDSE
Sbjct: 149 QRSN--SIAKKYLE-------SNHKIMDEARSSVDANKWVKTDSE 171

[Close]

BLAST of Sed0006448.1 vs. TAIR 10
Match: AT1G19115.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-14
Identity = 61/165 (36.97%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 92  PNPEKQVEDLPLDRFLNCPSSLEVDRRISNPLSCDSDDKDEDIERTISLIIGKCKDICAD 151
           P   K+V+ LP D       +      + N +    ++++E+ + +        KDI   
Sbjct: 29  PPLSKEVQGLPQDE-----ETFLAIGTLGNNIFPKQEEEEEETDSS--------KDITPV 88

Query: 152 RKTKAIG-KKSISFLLKKLFVCSNGFNPMPP---PSLKETLHESRMEKLLRTILLKKTAP 211
                IG KKS+SFLLKK+FVC++GF   PP    S  ++LH +RMEK+LRTIL KK  P
Sbjct: 89  NTDVTIGKKKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHP 148

Query: 212 QNGSRASSLKRYIEEKPSAKSSNEGGEEEQKNAKDGSKWVKTDSE 253
           Q  +  S  K+Y+E       SN    +E +++ D +KWVKTDSE
Sbjct: 149 QRSN--SIAKKYLE-------SNHKIMDEARSSVDANKWVKTDSE 171

The following BLAST results are available for this feature:

BLAST of Sed0006448.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964145.1	1.3e-115	85.28	uncharacterized protein LOC111464259 [Cucurbita moschata]	[more]
XP_023515105.1	1.8e-115	85.28	uncharacterized protein LOC111779233 [Cucurbita pepo subsp. pepo] >XP_023515106....	[more]
KAG6593560.1	3.9e-115	84.91	hypothetical protein SDJN03_13036, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022999979.1	5.1e-115	84.91	uncharacterized protein LOC111494303 [Cucurbita maxima]	[more]
XP_038899524.1	1.9e-114	83.33	protein DEEPER ROOTING 1 [Benincasa hispida]	[more]

BLAST of Sed0006448.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A072TLV8	3.7e-84	63.91	Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN...	[more]
A0A251PW43	2.4e-83	64.94	Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1	[more]
Q58G53	2.8e-63	49.32	Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1	[more]
Q5XVG3	2.3e-62	48.98	Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1	[more]
Q69P88	1.4e-27	35.32	Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 S...	[more]

BLAST of Sed0006448.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HK02	6.5e-116	85.28	uncharacterized protein LOC111464259 OS=Cucurbita moschata OX=3662 GN=LOC1114642...	[more]
A0A6J1KIM3	2.5e-115	84.91	uncharacterized protein LOC111494303 OS=Cucurbita maxima OX=3661 GN=LOC111494303...	[more]
A0A1S3CH46	3.9e-113	82.58	uncharacterized protein LOC103500678 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UYW4	1.1e-112	82.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CI43	1.1e-112	82.20	uncharacterized protein LOC103500678 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0006448.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17400.1	2.0e-64	49.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G72490.1	1.7e-63	48.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19115.1	3.2e-14	36.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.2	3.2e-14	36.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.3	3.2e-14	36.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..75
IPR044683	LAZY family	PANTHER	PTHR34045	OS03G0406300 PROTEIN	coord: 3..258

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006448	Sed0006448	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006448.1-cds	Sed0006448.1-cds-LG09:39896319..39896338	CDS
Sed0006448.1-cds	Sed0006448.1-cds-LG09:39896783..39896954	CDS
Sed0006448.1-cds	Sed0006448.1-cds-LG09:39897035..39897540	CDS
Sed0006448.1-cds	Sed0006448.1-cds-LG09:39898728..39898800	CDS
Sed0006448.1-cds	Sed0006448.1-cds-LG09:39899178..39899183	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006448.1-exon	Sed0006448.1-exon-LG09:39896319..39896338	exon
Sed0006448.1-exon	Sed0006448.1-exon-LG09:39896783..39896954	exon
Sed0006448.1-exon	Sed0006448.1-exon-LG09:39897035..39897540	exon
Sed0006448.1-exon	Sed0006448.1-exon-LG09:39898728..39898800	exon
Sed0006448.1-exon	Sed0006448.1-exon-LG09:39899178..39899183	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006448.1	Sed0006448.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0040008	regulation of growth