Sed0006361.1 (mRNA) Chayote v1

Overview


Name	Sed0006361.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Pectin lyase-like superfamily protein
Location	LG08: 7974043 .. 7982947 (+)
Sequence length	2128
RNA-Seq Expression	Sed0006361.1
Synteny	Sed0006361.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCGATTAATTTACATTTAATTAAACAGCAGCTTTCATCACGAACCCTGCTTCAAATACACTCATACCTTTACAAAATCGGAAGTTTCACTAACTTCGTAACAATCCCACCTGATTTTGATTACTAACAGCTCAACCAATTCACAATCCTTCTTCACCAATTCCCAATTCCCAATTCACAATTCACAATTCCCACTTCTCGATTCAGAATCTCAAATCCCCTTTTCCAGATCTCTCCGTTCTTCATCGATTCTTCAGAAACCCAGAAGAAACCCACATGCCCACGATCGATTCCAACCGACCCACTTCCTCAAATCCGCTAATTGACCACTAATTTCTTGCAGAACCAGTTCCGCATTGTGGGAAATGATGATGGAGGGCTCAATTTTCGGTGGGCGGTTCAATACCCAGCGGATTGAGTTGAAGCGGTGCGTTCCGGGTTTCTTCTCGACGTACAGGACGCTGTTCACAGTGCTCTGGATCGCGGCAGTGGCTACGATTTTGCTGTGGCAGGGCACTGCCGGTGATGGGTTCTTGTTTTTCCGGCGAGTTTCGGCCAGGCCGTTGCCGAGGCTGAGGCCTGTGGCTTACAATTTGACGGATTTTGGAGCTGTGGGCGATGGGGTTACTTTGAATACTGTGGCGTTTGAGAGGGCCGTTTTGGCTATTTCGAAGTTGAGGGCTAAAGGTGGGGGTCAGCTTAATGTGCCTCCTGGCCGTTGGCTTACGGCTCCCTTTAATCTCACTAGTCATATGACTTTGTTTCTTGATGAAGGTGCTGTTATATTGGGGATTCAGGTTTGTTTTCAACTTTCGAATGGTTTTTCTTTTAACTTTTGATGGATTTGATGGATGTCTTTTCTGCTTTTGATGGCTTGATACTGTTCTGTCTTCGGTTTTACGGGTGTACCTGGTTCGGGTTGGGTTGAATTAGGAGACTTTTTAGGTTGGTTGCAACTTGTTCAACCCTGCGACTCAATTCATATATTTTTGAGCTGGGATGGGCTCTCAGGTTGAGTTAATGTGTTTGGATTGTGTTAATCTCGTCTTTTCTATCAAAGACTTAATTCATAGGCAGTAAAAAACTAATGTATGATACTATTGTACCTAGGTTGCATATTCAGATTTCTTTACCAATATGTTAAGTATATATCTTATTAATTAATCTTACAAATAAATATATAAAATATTATTCTTAGTTTGGGTTGGATTTAACCGGTCAAAAATTGGCCACCTCAAGAACCCACATAACCCAACTCAAATAAAAAATTTACCAAACCCAATTCTTATCGTTTAGATTGGGTAGTCTAAGTTGTTCGGATTGTAGGTTTAGACTTTTGTTGGTGTAGTAATATGCAAATTTTTGGGACTTTATAGCTTAATTGGAAGGTTTTCATGGAGTTTATAATGTTCTCTTCCAACTTGAATTGGGGTAAATTGTTTGTTTTGAAGGCAAAGGACTTAGTTTAGGCTAGATCCATGGTTCAGAATATAACTTAATGGAATTGTGGGTTTCTTCGGTTCAAAATTTGCTTGTTTTCTATTAGTATGCTGCTCTGCTCTGTTCGAACTTCTACTTAAAATTGTAGTTAAAATTGGATGACTTGAGAGGATGTGTGGATAGATTTAATACACCATAGTGTTTGTGTAATCTAATTGAATAATATGTCGATTGTTAGCTTCACCATATGTATTGCCATTATTATTAGTATTGATACTGGTTATGTTGTTAGCTTCGCCATTAGTAAACTGAATAGTGAAAATTCAAATTAGAGATGCGTAACTGGGAGGGATATTGTTAGCTTCACCTAACAAAAGAATTAATATCCTAGGGGTTGACAGACAGACAAATGTAGTAGGGTTAGGCAGTTTCATCTGAGAATTGTCGAGGTGCAACAGATTATTTAGTAAGAGATACATAATCTAGGCTATAGATTCATACTACAGTTGTTAGATCTTGAGTGTTCCAAAAAAAAAATTTACAAGGAGCTATCATGAGCCAGATCATTTGACATTTCACAATTATGAATGGTGAAATTTCCCTCAGTTACGGAAGTGATTGCTTCAGACAATTTGAATAAATAAACTTTTTTATTGGACCTCATATTTCATACTTAACAAAATCGTTTCTTTATCCAATTTGAATAATTAGACATGTGAAACCATACAATTATCTGAATGAATGGATTGCCAAGATCTTCCCACGCAAACGTAACTATTTCCTAACTTGCACCCCCAGCTTCACCTATTTTTTCATGAAAGACAATAGGAATGTTAGATTGGCCAATTATATTGTTGTTTTTATATTTCAACATTTTATCTAATATGCAACCCATCGGGGAGCAGTTTATGGTTAAACCTTTTTTTTTTTGGATAACTTGGTAACTAGAGATGTCCATTTTCCCCGCGGGGACCCGCCCCTAACGGGGCGGGGAATCCCCGATTAAGCGGGGAACGGGGCCGGGGATGGAGGAGAAAAAATCCCCGTTGGCTAAACGGTGCCGGGGACGGGGATTGTACTCTCCGTCCCCGATTCCCCGATCCCCGCCTCGATTATTTTATTTATTTTGTTTAATATATATTTTTTAATTCTACTCCTTTAATTTTCAAATAAATATATCTTTGTTGATGATATTTTCTATACATATGAATATTTTCTTTGATAATTAACATTATAATTCAAACTTATAGATATATATATTTTTAAATCTAATTTTTTTAATTTTTTATCCAAAAAATATTTAAAAAAATTAAAAATCATGAGGAACCCGATCCCGCGCGTGCCCCGCATGGGAATCCTCGCCCGATCCCCGAAAAAAAAACTGGGGATTTTTCCGGGGACGGGGATTGAATTTTATGGCGGGGACGGGGACGGGGAAGCCATTCCCCGGCCCCGCCCCGCCCCGTGGACATCCCTATTGGTAACTTGGAGATTTGCTCCTCCAAACTTGGGGTACCACTGTGATAGAAACTACCACACTATTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAGACGACAATTCAATTGCATGCTTCTCAAAGACCTATCATCTCCTATTTATAACCCTAAACCCTAATTAACTAAAAGACTAATAATAGGCCCAAGCCCAATACAATTAAAATAGCAATTAACTAATACATAATAAATACTAATACTAATATTCCTAAAACTCCAAGGTCCGGATCGTATCAATACTTTCCCCCCCAAGAGCCACCTTCTGCAGCTCCGTCTTCTGGCTAAAAGTATGTCACATCAACATCCTGGTAATCGTGCGAATCTCGAACGACCCACACATCCAAATTCTGGAGTTCTTTCTTCTGACAACGATGTCCCGGGACAAATCGTTCATCACAACGAAAGCATAACCCTTTGTCCTTCCTTGCTCGAATTTCGGCCGGTGAGTTTTTACAGTCGTCGCGGGTTAATGGTTGTAGTCCTGTGAGAAGGAGTCTCTGTGCTTCCAGTTCCTGATGCAATCGTTCCCGCTTTAGCCTTGATCGTTGCAGAAGTACTTTCCTCATTTTGGGTAGCCTGAAAAGAAAAATCATCCTCAATCACCTGTGCCATAAACTTCTTATCCTAAATCCCAACCGGTCGCAGTTTCCTCATTTCACTTCTAATTTCTGCCTTCAACCCGCTTTCCCATTTCCCTTCCAATGCACTTGCACTAATATCACGCATTCCCTTTGCATACTTCTCAAACAGTCGTCGATACTCTTTAACTGTTCCAACCTGTTGTAAACTCATCAGATTGGCGTACTTGTTGTCATTAATCGTTGGTTGGAAACGATGCAATAATAGTTCTCAGAATTCTTCCTAAGAACTGATCGGGGATCGATCTTCCTCATACTGCAACCATTCCAAAGCCTCACCCTCCATACACAAAGCTGCAACATCGACCCGTTCTTGTCCTTCCAGCCGGTTTACCCAAAAGTATCGTTCTACTCGACACAACCATCCGTCCGGATCCTCATCGGTAAACCCTTTGAATACCGGCATCTCGAGTTTCCGTAATCTCCTGTCTAACACCGACCCTTCTCTACCTCCTGTTCTCGGTCCTCCTCGTTCGTAACGATCCTCCCACTCCCTCCAGGCCTCTCGGTCTAAATGACATTGATTATCCCATCCCCGGTCGTTCCAACCGTCACGCGCTATCGGCCTATCATAACCGATGCGCACCCTCCTCCCCTCCGTAAACTCGTTGCCTCGACCATCGACCTTCGGTTCCCCCTTTCGATCGAATCCCGGTCCCCCACAATCGAAACGACTCTCTCTCCGGTCCAACCTGGCTGACCCAGACCGACCCGCCCCTACCCTGTCCTCCTGGGCCGCCGCCGTGCCACACGCCGCCCGGTCCCGCGCTTGACCCAAGCCCACCACCCCGGCCTTGCTCGGCCCTGACTCCGCACATCGCCATGCCCGCGCCCCAGCCCGAGGCCTCAGCGCCGCCTATGCCCGAGCCCCAACCCGAGTCTGGTCCCCCCTGGCCGCCGCCGTGCCACACGCCTCCCGATCCCGCGCCTGGCCCCAGCCCACAGCCTCGACCCCGCTCGCCCCCGGCTCCGCACACCCCCATGCCAGCACCCCAGCCCCGGATTTCGCCGCCCGGACCCGCGCCCTAGCACCGGCTCTCGTCCCCCGGACCCCCCCATCGGCCAGGTCCCGCGCCGCGCTCAACCATGCCCCCGCTCATGCCCTCGTAGCCTCACGCCCAGCTCCTCCCGGCCCGACACCCCCCCAGCCCGGTCCCGCGCTTGCACGCCCAGCTCCTCCCGCACCCCTCGCGCCGAATGCTACCCCCAAGCCACCCACGTCACCGGCGCCGCTCGCGCTACCCAGCCCCTCCGAGCCCGAGTGTGCGCCCCTCGACCCCACGTCGCCCTGGCCCTTCGCGTCGGCCCACCCTGCCGCACCTCCGCCGTGCCACGCTTCGCCTCGCCGACCGCCACAGCTCCTGCGTCGCAAGCACCAGCCGCAGCCGCCCCGCTCGATCCCTCCCCGTAGCCTCAGGCATCGAGCCCTTCCCCTTGTCTGCTCGGATTGTCTCCACTAAAAGTTCCAGATTTCGGTTCATCGTCTCGAGCTTCGAATCCTGCAAATCCAGCCTTTTCCCTAACCTTTCTTCCATCGCTTCCATCCTCGCGTTAGTCTCCTGTAACTTCTTGGCCAAGTCGGCCGTTCCTTCTTCACACTCTTGCATCCTGGATTCCATCTTAGTAGTAACCATTCCCGGATCGGCAAATGGCTCTGATACCAAAATGATAGAAACTACCACACTATTTTATTAAACTACGATAAATCTCTCGAGAGAATCTCTCAAAGAGCCCAGAGTACAAGACGACAATTCAATTGCATGCTTCCCAAAGACCTATCATCTCCTATTTATAACCCTAAACCCTAATTAACTAAAAGACGAATAATAGGCCCAAGCCCAATACAATTAAAATAGCAATTAACTAATACATAATAAATACTAATACTAATATTCCTAAAAATCCAAGGTCCGGATCGTATCACACTGGTCCATTCCTAAATGGTTGCACCGAGATACATTGGAAGAACGAAGACACAGTTGAGAGTGTCTACAAACTAATGTTACAAACGGATCTCGAACTCGTGACCTTAAGGGAGGCATACTCTTGAAGCCCGTGCATTCGGCCAACCCCTTCACCCCTAGGGGCAGGGACTATGGTTAATTAAACCAATGGATTGTTTACGGTTAATCCAATGGATTGTTTATGGTTTGTCTAATATGCAACCCATCAGGGAGCAGTTTATGGTTAAACCAATGGATTGTTTCAGACTTCTTGTTGGACCAATATGGCTTTTATTGTTGTTTCTTTAGTTTGTAGAATGAGTTTCTAGCAACGGTCTGAATGTTGGCTAATCTTATTCATGTCACAGGATGAAACATATTGGCCACTGATGCCTCCTTTGCCTTCTTATGGGTATGGAAGGGAGCACATTGGACCTCGATATGGGAGTTTGATTCATGGTCAAAATCTCAGAGATGTTGTGATAACAGGTCAGATTGATCAGTATTTGTTTAGTTACTTATTTGTTAAATATTGCTTGGGAACCTCAGCATAAACATATCGAAAAAAGTCCAAATTATCATCACCTTAAAAGAGGCATAAACAAGAAATTTATACGATCTCGATTAATATCTGTGTTCTATCTGTTGGTTTATTTGCGTGATTATGTTAAGTGACTGGATGTAACTTTTGTTGAAGCTTGAAATCTGAAAATTAGATAAAGCTGGAAATTAAAGAAAGGAAAAAGGTGGAAAATAAAACTCATTCTTTGACTTCATCTTCTAACTGTCAATCAGTAAGGAAAATTGTGGTAATGGGGGAAAATGTGAAGGAAATTTCTGTAATTTGAACTAAAAACACAACACAACAACCGATAACCCGAAAAGCCCTATTATTTAATTTGATAAGTCTGATTGTGTATATGTCATGACTTACAGGGTATAATGGTACTATAAACGGACAGGGCCAAACATGGTGGAAGAAATATCGCCAAAAACTGCTTAACCACACAAGGGGCCCCCTTGTTCAGATCATGTGGTCAAGTGATATTGTAATCAGCAATATAACTTTACGTGACTCTCCTTTTTGGACACTACATCCATACGATTGTAAGAATGTTACTATCCGGAATGTTACAATCTTGGCTCCTGTACATGATGCACCAAATACAGATGGAATAGATCCTGGTAAACTTTAACGCTTTGTTTATATCATCGTCCAATCGAATGCTTGGAATGTAATGACGTAGCTGCTGTGTAGTATATGTAGAGTAGGTTGGACCATTCGCGTTAGTTGATATAATTGAATTTCCCCAATCCATCAATTAAGTTTTTTTGGGTTGATTGATGATTTAACATTAACATGGTAAGAGTAGGAGGTCTTGAGTTCAAGTCTCTGTCAAATTTTTTTTTTATTTTCAAATTTTTAAGCCCACAAGTGAGGGAGAATGTTAGTTGATATAATTAAATTTACCCCAATCCACCCGCTTAAGCTTTTAGGTTGATTGGTGATTTAACCTAATCTAACAACCGGCATTGATAAATTGAATTGGTCTTATAGGAAAGGGGTATTGTATTGGATACCTAAAAGAAAGCAAAAGATCATTCAGCTTTTCCCATAGTAAAACTTTTTATGTTGAAGATGGAGCTGAAACTTAGTTTCTGGATTAGGTGGTGCTGCTTTCATTTCTTTTTTATGTATACTTTTTTATAGCGATAACTGTATGGGTCATCTAACACGCACCTCTACTATTTTTATGGAATATACCATTTTACCTTGCTACATTTGGATGTCAAAAAAATCTCTAAGAAATTAATCTTAGATAGGTGACTACCATAGATTGAACTCATCGCCTCTTAGTTTTATAAGGTCTTCTTGACCATTAGTCATGATGGTTAGGTGGCGATGGCTTATGATATGAATAATTATTGAGCGTAAGGAGGTAGGGTGATTGACCAGTCTGGATTGAGTTTAATTAGTTCTAATTTGCAGCTAAACCTATGTTAGTTGGGAATGATAAGAAAATCCTTCTGTGCTGTTAAACTTAAATTTGCACTGGTTTTCACTCGGTGCTTATATCAATAAATCATCTGTTATGAGCTCAATTTTATTGAGCTGCCTGGTCAAGGATCTGCCCTTGACTAAAATGCTTTAGGTTCAAATCTCCCACTCTCCCATGTTGTTTGGAAACAAAAATTCTAATAGTCTACTATAATTTAGATACATTCAACTTTATAAATTGTTATTTGATAATGGCTTGCTCCATTCTTTATGTTTCCATGAACAGATTCATGTGAAGATATGGTAATTGAGGACTGTTACATAAGTGTGGGAGACGATGGCATTGCAATTAAGAGTGGTTGGGATCAGTATGGTATTGCTTATGGGCAACCCTCGAGAAATATACGAATCCGAAACGTTGTTCTTCAATCTATGGTTAGGTAAATATCTCACTCGTATACGTAGGAAAGTACATATTAACTACATTCATGTGATATGAAAGTAGCGAGCTTATCATTTTGGTTGAACCTCTTCAGTGCTGGTATATCAATTGGTAGTGAGATGTCGGGTGGTGTATCGGGCATCACTGTAGAGAACGTCGTGGTCTGGAACTCTAGGCGAGGTGTTAGGATCAAGACTGCTCCAGGAAGAGGAGGATACGTGCAAGACATTACTTATCGAAATCTGACCCTCGATGTCGTACGTGTTGGGATCGTCATAAAGACAGACTACAACGAACACCCAGATGAAGGATATGATCCAAAGGCAGTTCCAGTACTGAAGGACATAAGCTTCACGGGCATCCATGGGCAGGGAGTCCGAGTGCCTGTTCGAATGCATGGCAGCGAAGACATTCCCGTGCAAAATGTAACATTCAGGGACATGTCTGTGGGAATAACATACAAAAAGAAACATATATTCCAATGTGCATTCGTGCAAGGACGTGTGATAGGAACTATCTTCCCTGCTCCATGCGACAACCTCGATCGATACGACGAGCAAGAACGACTAATTAAACACTCTGCTGCCCAAAATGCAACAGATATCGACTACGACTTTTGATTTAAGTCACCGAATACTGCTCTATTTTTTCTTTCTTTTTCCACCAGCTAAACATTCTACAATGTCTATTTTATGACTGAAAGTTACATTTTTTTTGTTTGCTGAGCTGTACATAAAGAACCCCTTTTACAAGAAGAGAAAGGTTTGAATTTTTGAGTTGTTTTTCTCTGTCTCTTTTGTGTATAGTCCCATTTGAATGGCAATGGCTCTGCTCTTCAACTTTGCAGGTAGCAGAGTTTAGTGGTGGTGGGGCTAAGAGAAATATGGTGAATGGCCAAG

mRNA sequence

TTATCGATTAATTTACATTTAATTAAACAGCAGCTTTCATCACGAACCCTGCTTCAAATACACTCATACCTTTACAAAATCGGAAGTTTCACTAACTTCGTAACAATCCCACCTGATTTTGATTACTAACAGCTCAACCAATTCACAATCCTTCTTCACCAATTCCCAATTCCCAATTCACAATTCACAATTCCCACTTCTCGATTCAGAATCTCAAATCCCCTTTTCCAGATCTCTCCGTTCTTCATCGATTCTTCAGAAACCCAGAAGAAACCCACATGCCCACGATCGATTCCAACCGACCCACTTCCTCAAATCCGCTAATTGACCACTAATTTCTTGCAGAACCAGTTCCGCATTGTGGGAAATGATGATGGAGGGCTCAATTTTCGGTGGGCGGTTCAATACCCAGCGGATTGAGTTGAAGCGGTGCGTTCCGGGTTTCTTCTCGACGTACAGGACGCTGTTCACAGTGCTCTGGATCGCGGCAGTGGCTACGATTTTGCTGTGGCAGGGCACTGCCGGTGATGGGTTCTTGTTTTTCCGGCGAGTTTCGGCCAGGCCGTTGCCGAGGCTGAGGCCTGTGGCTTACAATTTGACGGATTTTGGAGCTGTGGGCGATGGGGTTACTTTGAATACTGTGGCGTTTGAGAGGGCCGTTTTGGCTATTTCGAAGTTGAGGGCTAAAGGTGGGGGTCAGCTTAATGTGCCTCCTGGCCGTTGGCTTACGGCTCCCTTTAATCTCACTAGTCATATGACTTTGTTTCTTGATGAAGGTGCTGTTATATTGGGGATTCAGGATGAAACATATTGGCCACTGATGCCTCCTTTGCCTTCTTATGGGTATGGAAGGGAGCACATTGGACCTCGATATGGGAGTTTGATTCATGGTCAAAATCTCAGAGATGTTGTGATAACAGGGTATAATGGTACTATAAACGGACAGGGCCAAACATGGTGGAAGAAATATCGCCAAAAACTGCTTAACCACACAAGGGGCCCCCTTGTTCAGATCATGTGGTCAAGTGATATTGTAATCAGCAATATAACTTTACGTGACTCTCCTTTTTGGACACTACATCCATACGATTGTAAGAATGTTACTATCCGGAATGTTACAATCTTGGCTCCTGTACATGATGCACCAAATACAGATGGAATAGATCCTGATTCATGTGAAGATATGGTAATTGAGGACTGTTACATAAGTGTGGGAGACGATGGCATTGCAATTAAGAGTGGTTGGGATCAGTATGGTATTGCTTATGGGCAACCCTCGAGAAATATACGAATCCGAAACGTTGTTCTTCAATCTATGGTTAGTGCTGGTATATCAATTGGTAGTGAGATGTCGGGTGGTGTATCGGGCATCACTGTAGAGAACGTCGTGGTCTGGAACTCTAGGCGAGGTGTTAGGATCAAGACTGCTCCAGGAAGAGGAGGATACGTGCAAGACATTACTTATCGAAATCTGACCCTCGATGTCGTACGTGTTGGGATCGTCATAAAGACAGACTACAACGAACACCCAGATGAAGGATATGATCCAAAGGCAGTTCCAGTACTGAAGGACATAAGCTTCACGGGCATCCATGGGCAGGGAGTCCGAGTGCCTGTTCGAATGCATGGCAGCGAAGACATTCCCGTGCAAAATGTAACATTCAGGGACATGTCTGTGGGAATAACATACAAAAAGAAACATATATTCCAATGTGCATTCGTGCAAGGACGTGTGATAGGAACTATCTTCCCTGCTCCATGCGACAACCTCGATCGATACGACGAGCAAGAACGACTAATTAAACACTCTGCTGCCCAAAATGCAACAGATATCGACTACGACTTTTGATTTAAGTCACCGAATACTGCTCTATTTTTTCTTTCTTTTTCCACCAGCTAAACATTCTACAATGTCTATTTTATGACTGAAAGTTACATTTTTTTTGTTTGCTGAGCTGTACATAAAGAACCCCTTTTACAAGAAGAGAAAGGTTTGAATTTTTGAGTTGTTTTTCTCTGTCTCTTTTGTGTATAGTCCCATTTGAATGGCAATGGCTCTGCTCTTCAACTTTGCAGGTAGCAGAGTTTAGTGGTGGTGGGGCTAAGAGAAATATGGTGAATGGCCAAG

Coding sequence (CDS)

ATGATGATGGAGGGCTCAATTTTCGGTGGGCGGTTCAATACCCAGCGGATTGAGTTGAAGCGGTGCGTTCCGGGTTTCTTCTCGACGTACAGGACGCTGTTCACAGTGCTCTGGATCGCGGCAGTGGCTACGATTTTGCTGTGGCAGGGCACTGCCGGTGATGGGTTCTTGTTTTTCCGGCGAGTTTCGGCCAGGCCGTTGCCGAGGCTGAGGCCTGTGGCTTACAATTTGACGGATTTTGGAGCTGTGGGCGATGGGGTTACTTTGAATACTGTGGCGTTTGAGAGGGCCGTTTTGGCTATTTCGAAGTTGAGGGCTAAAGGTGGGGGTCAGCTTAATGTGCCTCCTGGCCGTTGGCTTACGGCTCCCTTTAATCTCACTAGTCATATGACTTTGTTTCTTGATGAAGGTGCTGTTATATTGGGGATTCAGGATGAAACATATTGGCCACTGATGCCTCCTTTGCCTTCTTATGGGTATGGAAGGGAGCACATTGGACCTCGATATGGGAGTTTGATTCATGGTCAAAATCTCAGAGATGTTGTGATAACAGGGTATAATGGTACTATAAACGGACAGGGCCAAACATGGTGGAAGAAATATCGCCAAAAACTGCTTAACCACACAAGGGGCCCCCTTGTTCAGATCATGTGGTCAAGTGATATTGTAATCAGCAATATAACTTTACGTGACTCTCCTTTTTGGACACTACATCCATACGATTGTAAGAATGTTACTATCCGGAATGTTACAATCTTGGCTCCTGTACATGATGCACCAAATACAGATGGAATAGATCCTGATTCATGTGAAGATATGGTAATTGAGGACTGTTACATAAGTGTGGGAGACGATGGCATTGCAATTAAGAGTGGTTGGGATCAGTATGGTATTGCTTATGGGCAACCCTCGAGAAATATACGAATCCGAAACGTTGTTCTTCAATCTATGGTTAGTGCTGGTATATCAATTGGTAGTGAGATGTCGGGTGGTGTATCGGGCATCACTGTAGAGAACGTCGTGGTCTGGAACTCTAGGCGAGGTGTTAGGATCAAGACTGCTCCAGGAAGAGGAGGATACGTGCAAGACATTACTTATCGAAATCTGACCCTCGATGTCGTACGTGTTGGGATCGTCATAAAGACAGACTACAACGAACACCCAGATGAAGGATATGATCCAAAGGCAGTTCCAGTACTGAAGGACATAAGCTTCACGGGCATCCATGGGCAGGGAGTCCGAGTGCCTGTTCGAATGCATGGCAGCGAAGACATTCCCGTGCAAAATGTAACATTCAGGGACATGTCTGTGGGAATAACATACAAAAAGAAACATATATTCCAATGTGCATTCGTGCAAGGACGTGTGATAGGAACTATCTTCCCTGCTCCATGCGACAACCTCGATCGATACGACGAGCAAGAACGACTAATTAAACACTCTGCTGCCCAAAATGCAACAGATATCGACTACGACTTTTGA

Protein sequence

MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFRRVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMHGSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKHSAAQNATDIDYDF

Homology

[Close]

BLAST of Sed0006361.1 vs. NCBI nr
Match: XP_038879850.1 (probable polygalacturonase [Benincasa hispida])

HSP 1 Score: 966.8 bits (2498), Expect = 6.9e-278
Identity = 456/493 (92.49%), Postives = 472/493 (95.74%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SI GGRFN QRI+LKRCVP FFSTYRTLFTV WIAAVATI LWQ T GDGF F R
Sbjct: 1   MMVETSILGGRFNNQRIDLKRCVPAFFSTYRTLFTVFWIAAVATIFLWQSTIGDGFFFLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           RVSARPLP+LRPV +NLTDFGAVGDGVTLNT AFE+A+LAISKLR KGGGQLNVP GRWL
Sbjct: 61  RVSARPLPKLRPVVFNLTDFGAVGDGVTLNTKAFEKAILAISKLRTKGGGQLNVPSGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDENAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           V+ITG+NGTINGQGQ WWKKYRQKLLNHTRGPLVQIMWS DIVISNITLRDSPFWTLHPY
Sbjct: 181 VMITGHNGTINGQGQAWWKKYRQKLLNHTRGPLVQIMWSRDIVISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPS+NIRIRNV+LQSMVSAGISIGSEMSGGVSG+TVEN+V+WNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSKNIRIRNVILQSMVSAGISIGSEMSGGVSGVTVENIVIWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDITYRNLTLD VRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSEDIPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIKH
Sbjct: 421 GSEDIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKH 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. NCBI nr
Match: XP_022147646.1 (probable polygalacturonase [Momordica charantia])

HSP 1 Score: 964.1 bits (2491), Expect = 4.5e-277
Identity = 456/493 (92.49%), Postives = 475/493 (96.35%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SI GGRF++QRI+ KRC+P FFSTYRTLFTV WIAAVATI LWQGT G+GFL  R
Sbjct: 1   MMVETSILGGRFHSQRIDFKRCIPAFFSTYRTLFTVFWIAAVATIFLWQGTIGNGFLSLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           R SARPLPRLRPVA+NLTDFGAVGDGVTLNT AFERA+LAISKLR +GGGQLNVPPGRWL
Sbjct: 61  RASARPLPRLRPVAFNLTDFGAVGDGVTLNTEAFERAILAISKLRTRGGGQLNVPPGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AV+LG+QDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVVLGVQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIR VTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRKVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSG+TVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGVTVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           V+DITYRNLTLDVVRVGIVIKTDYNEHPDEG+DPKAVPVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VRDITYRNLTLDVVRVGIVIKTDYNEHPDEGFDPKAVPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSE+IPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEEIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. NCBI nr
Match: XP_008450948.1 (PREDICTED: probable polygalacturonase [Cucumis melo] >TYK10010.1 putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 961.8 bits (2485), Expect = 2.2e-276
Identity = 457/493 (92.70%), Postives = 471/493 (95.54%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SIFGGRFN QRI+LKRCVP FFSTYRT+FTV WIAAVATI LWQ T GDGF F R
Sbjct: 1   MMVETSIFGGRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQSTIGDGFFFLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           RVSARPLPRLRP  +NLTDFGAVGDGVTLNT AFE+A+LAISKLR KGGGQLNVP GRWL
Sbjct: 61  RVSARPLPRLRPAVFNLTDFGAVGDGVTLNTNAFEKAILAISKLRTKGGGQLNVPAGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTI+GQGQTWWKKYRQKLLNHTRGPLVQIMWS DI+ISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTISGQGQTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPS+NIRIRNVVLQSMVSAGISIGSEMSGGV GITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVLGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDITYRNLTLD VRVGIVIKTDYNEHPDEGYDPKA+PVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSEDIPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEDIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. NCBI nr
Match: KAA0055759.1 (putative polygalacturonase [Cucumis melo var. makuwa])

HSP 1 Score: 959.5 bits (2479), Expect = 1.1e-275
Identity = 455/493 (92.29%), Postives = 470/493 (95.33%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SIFGGRFN QRI+LKRCVP FFSTYRT+FTV WIAAVATI LWQ T GDGF   R
Sbjct: 1   MMVETSIFGGRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQSTIGDGFFLLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           RVSARPLPRLRP  +NLTDFGAVGDGVTLNT AFE+A+LAISKLR KGGGQLNVP GRWL
Sbjct: 61  RVSARPLPRLRPAVFNLTDFGAVGDGVTLNTNAFEKAILAISKLRTKGGGQLNVPAGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTI+GQGQTWWKKYRQKLLNHTRGPL QIMWS DI+ISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTISGQGQTWWKKYRQKLLNHTRGPLFQIMWSRDILISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPS+NIRIRNVVLQSMVSAGISIGSEMSGG+SGITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSKNIRIRNVVLQSMVSAGISIGSEMSGGISGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDITYRNLTLD VRVGIVIKTDYNEHPDEGYDPKA+PVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSEDIPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEDIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. NCBI nr
Match: XP_022987942.1 (probable polygalacturonase [Cucurbita maxima])

HSP 1 Score: 959.1 bits (2478), Expect = 1.4e-275
Identity = 458/493 (92.90%), Postives = 471/493 (95.54%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SI GGRFN QRI+ KRCVP FFSTYRTLFTVLWIAAVATI LW  T  DGF F R
Sbjct: 1   MMVETSILGGRFNNQRIDFKRCVPAFFSTYRTLFTVLWIAAVATIFLWMSTIRDGFFFLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
            VS+RPLPRLRPVA+NLTDFGAVGDGVTLNT AFERA+LAISKLR+KGGGQLNVP GRWL
Sbjct: 61  PVSSRPLPRLRPVAFNLTDFGAVGDGVTLNTEAFERAILAISKLRSKGGGQLNVPSGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWS DIVISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSRDIVISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
            QPS+NIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 RQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDI+YRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDISYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSE+IPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERL+K 
Sbjct: 421 GSEEIPVRNVTFRDMSVGITYKKKHIFQCAFVYGRVIGTIFPAPCDNLDRYDEQERLVKR 480

Query: 481 SAAQNATDIDYDF 494
           SAAQNATDIDYDF
Sbjct: 481 SAAQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. ExPASy Swiss-Prot
Match: A7PZL3 (Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.0e-107
Identity = 188/394 (47.72%), Postives = 261/394 (66.24%), Query Frame = 0


Query: 76  NLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHMTLFLD 135
           +L DFG VGDG TLNT AF+ AV  +SK  ++GG QL VP G+WLT  F+LTSH TLFL 
Sbjct: 64  SLVDFGGVGDGQTLNTKAFQDAVSELSKYGSEGGAQLYVPAGKWLTGSFSLTSHFTLFLH 123

Query: 136 EGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGYNGTINGQGQ 195
             AV+L  QD + WP++ PLPSYG GR+    RY SLI G NL DV+ITG NGTI+GQG 
Sbjct: 124 RDAVLLASQDISQWPVIKPLPSYGRGRDAAAGRYTSLIFGTNLTDVIITGDNGTIDGQGG 183

Query: 196 TWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNVTILAP 255
            WW+++    L +TR  L+++M+S+DI ISN+TL +SP W +HP   +N+ I+ +TILAP
Sbjct: 184 LWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQGITILAP 243

Query: 256 VHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIRNVVLQ 315
           V  +PNTDGI+PDSC +  IEDCYI  GDD +A+KSGWD+YGIAYG P++ + IR +   
Sbjct: 244 VR-SPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 303

Query: 316 SMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDVVR 375
           S  SA I++GSEMSGG+  +  E++V  NS  G+RIKT  GRGGYV+DI  R +T+  ++
Sbjct: 304 SPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMK 363

Query: 376 VGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMHGSEDIPVQNVTFRDM 435
               +  +Y  H D  YDPKA PV++ I++  +  + V +  R+ G    P   +   ++
Sbjct: 364 WAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNV 423

Query: 436 SVGITYKKKHI-FQCAFVQGRVIGTIFPAPCDNL 469
           ++ +  K K + + C  V+G +   + P PC  L
Sbjct: 424 TIHLAAKAKKVPWTCTDVEG-ISSGVTPTPCSTL 455

[Close]

BLAST of Sed0006361.1 vs. ExPASy Swiss-Prot
Match: Q9LW07 (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.4e-30
Identity = 123/372 (33.06%), Postives = 169/372 (45.43%), Query Frame = 0


Query: 74  AYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHMTLF 133
           A ++T FGAVGDGVT ++ AF +A  A+      G GQ  VP G      F L     L 
Sbjct: 23  ALDVTQFGAVGDGVTDDSQAFLKAWEAVCS--GTGDGQFVVPAG----MTFML---QPLK 82

Query: 134 LDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGYNGTINGQ 193
                    +  +    L+ P      G +         I   ++  +VI G +G INGQ
Sbjct: 83  FQGSCKSTPVFVQMLGKLVAPSKGNWKGDK------DQWILFTDIEGLVIEG-DGEINGQ 142

Query: 194 GQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNVTIL 253
           G +WW+         +R   ++    +++ +S +T  DSP   +H  +C  VTI ++ I 
Sbjct: 143 GSSWWEH------KGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRIN 202

Query: 254 APVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIRNVV 313
           AP   +PNTDGID  +  ++VI+DC I+ GDD IAI SG           + NI I  + 
Sbjct: 203 AP-ESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHISGI- 262

Query: 314 LQSMVSAGISIGSEMSGGVSGITVENVVVWN-----SRRGVRIKTAPGRGGYVQDITYRN 373
                  GISIGS    G +  TVENV V N     +  G RIKT  G  GY + IT+  
Sbjct: 263 -DCGPGHGISIGSLGKDGETA-TVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNG 322

Query: 374 LTLDVVRVGIVIKTDYN-EHPDEGYDPK--AVPVLKDISFTGIHGQGVRVPVRMHGSEDI 433
           +TLD V   I+I   YN    D   D K  AV V K +    I        V    SE +
Sbjct: 323 ITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSEYGVDFRCSERV 357

Query: 434 PVQNVTFRDMSV 438
           P   +  RDM +
Sbjct: 383 PCTEIFLRDMKI 357

[Close]

BLAST of Sed0006361.1 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 3.0e-26
Identity = 109/400 (27.25%), Postives = 175/400 (43.75%), Query Frame = 0


Query: 55  GFLFFRRVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNV 114
           G   F R S R      P   +++DFGA GDG T +T AF  A        + G   L V
Sbjct: 53  GLRSFVRASLR-----TPTTVSVSDFGAKGDGKTDDTQAFVNAWK--KACSSNGAVNLLV 112

Query: 115 PPGR-------WLTAPFNLTSHMTLF--LDEGAVILGIQDETYWPLMPPLPSYGYGREHI 174
           P G         LT P N    + +F  L         +D + W +   +          
Sbjct: 113 PKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGV---------- 172

Query: 175 GPRYGSLIHGQNLRDVVITGYNGTINGQGQTWWKK--YRQKLLNHTRGPLVQIMWSS-DI 234
                      NL   V  G  G ++G G+TWW+    R K    T+ P     ++S  +
Sbjct: 173 ----------NNLS--VDGGDTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSL 232

Query: 235 VISNITLRDSPFWTLHPYDCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISV 294
           ++ N+ +R++    +    C NV + NV + AP  D+PNTDGI   + +++ + +  I  
Sbjct: 233 IVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPA-DSPNTDGIHITNTQNIRVSESIIGT 292

Query: 295 GDDGIAIKSGWDQYGIAYGQPSRNIRIRNVVLQSMVSAGISIGS----EMSGGVSGITVE 354
           GDD I+I+SG           S+N++I ++        GISIGS         VSG+TV+
Sbjct: 293 GDDCISIESG-----------SQNVQINDITCGP--GHGISIGSLGDDNSKAFVSGVTVD 352

Query: 355 NVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVP 414
              +  +  GVRIKT  G  G   +I ++N+ +D V+  I+I  DY +      +  AV 
Sbjct: 353 GAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQ 408

Query: 415 VLKDISFTGIHGQGV-RVPVRMHGSEDIPVQNVTFRDMSV 438
           V K++ +  I G       +  + S++ P Q +    +++
Sbjct: 413 V-KNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI 408

[Close]

BLAST of Sed0006361.1 vs. ExPASy Swiss-Prot
Match: P27644 (Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 68/169 (40.24%), Postives = 103/169 (60.95%), Query Frame = 0


Query: 228 TLRDSPFWTLHPYDCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGI 287
           T+R++  WT+HP  C+++T    TI+AP HD+PNTDG +P+SC +++I     SVGDD I
Sbjct: 39  TIRNAASWTIHPQGCEDLTAAASTIIAP-HDSPNTDGFNPESCRNVMISGVRFSVGDDCI 98

Query: 288 AIKSG--WDQYGIAYGQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNS 347
           A+K+G         +   +R I +R+ ++Q     G+ IGSEMSGGV  +TVE+  +  +
Sbjct: 99  AVKAGKRGPDGEDDHLAETRGITVRHCLMQP-GHGGLVIGSEMSGGVHDVTVEDCDMIGT 158

Query: 348 RRGVRIKT-APGRGGYVQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYD 394
            RG+R+KT A   GG V +IT R + LD V+  +     Y+   D G+D
Sbjct: 159 DRGLRLKTGARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDAD-GHD 204

[Close]

BLAST of Sed0006361.1 vs. ExPASy Swiss-Prot
Match: P05117 (Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.5e-22
Identity = 96/379 (25.33%), Postives = 159/379 (41.95%), Query Frame = 0


Query: 76  NLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGR-------WLTAPFNLTS 135
           N+  FGA GDG T + +AFE+A       R     Q  VP  +         + P   + 
Sbjct: 77  NVLSFGAKGDGKTYDNIAFEQAWNEACSSRTP--VQFVVPKNKNYLLKQITFSGPCRSSI 136

Query: 136 HMTLF--LDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGY 195
            + +F  L+  + I   +D   W     +                    QNL    + G 
Sbjct: 137 SVKIFGSLEASSKISDYKDRRLWIAFDSV--------------------QNL----VVGG 196

Query: 196 NGTINGQGQTWWKKYRQ--KLLNHTRGPLVQIMWS-SDIVISNITLRDSPFWTLHPYDCK 255
            GTING GQ WW    +  K L     P     W+  ++ ++N+  +++    +    C 
Sbjct: 197 GGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCT 256

Query: 256 NVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQP 315
           NV   N+ I A    +PNTDG+   + + + I D  I  GDD I+I SG           
Sbjct: 257 NVVASNLMINASA-KSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG----------- 316

Query: 316 SRNIRIRNVVLQSMVSAGISIGSEMSGG----VSGITVENVVVWNSRRGVRIKTAPGRGG 375
           S+N++  N+        GISIGS  SG     VS +TV    +  +  GVRIKT  G  G
Sbjct: 317 SQNVQATNITCGP--GHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSG 376

Query: 376 YVQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHG-QGVRVPVR 435
              +I + N+ +  V+  I+I  +Y +  +      +   +K++ +  I G    +V ++
Sbjct: 377 QASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIK 415

Query: 436 MHGSEDIPVQNVTFRDMSV 438
              S + P + +   ++++
Sbjct: 437 FDCSTNFPCEGIIMENINL 415

[Close]

BLAST of Sed0006361.1 vs. ExPASy TrEMBL
Match: A0A6J1D302 (probable polygalacturonase OS=Momordica charantia OX=3673 GN=LOC111016517 PE=3 SV=1)

HSP 1 Score: 964.1 bits (2491), Expect = 2.2e-277
Identity = 456/493 (92.49%), Postives = 475/493 (96.35%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SI GGRF++QRI+ KRC+P FFSTYRTLFTV WIAAVATI LWQGT G+GFL  R
Sbjct: 1   MMVETSILGGRFHSQRIDFKRCIPAFFSTYRTLFTVFWIAAVATIFLWQGTIGNGFLSLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           R SARPLPRLRPVA+NLTDFGAVGDGVTLNT AFERA+LAISKLR +GGGQLNVPPGRWL
Sbjct: 61  RASARPLPRLRPVAFNLTDFGAVGDGVTLNTEAFERAILAISKLRTRGGGQLNVPPGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AV+LG+QDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVVLGVQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIR VTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRKVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSG+TVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGVTVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           V+DITYRNLTLDVVRVGIVIKTDYNEHPDEG+DPKAVPVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VRDITYRNLTLDVVRVGIVIKTDYNEHPDEGFDPKAVPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSE+IPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEEIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. ExPASy TrEMBL
Match: A0A5D3CF90 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001410 PE=3 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 457/493 (92.70%), Postives = 471/493 (95.54%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SIFGGRFN QRI+LKRCVP FFSTYRT+FTV WIAAVATI LWQ T GDGF F R
Sbjct: 1   MMVETSIFGGRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQSTIGDGFFFLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           RVSARPLPRLRP  +NLTDFGAVGDGVTLNT AFE+A+LAISKLR KGGGQLNVP GRWL
Sbjct: 61  RVSARPLPRLRPAVFNLTDFGAVGDGVTLNTNAFEKAILAISKLRTKGGGQLNVPAGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTI+GQGQTWWKKYRQKLLNHTRGPLVQIMWS DI+ISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTISGQGQTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPS+NIRIRNVVLQSMVSAGISIGSEMSGGV GITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVLGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDITYRNLTLD VRVGIVIKTDYNEHPDEGYDPKA+PVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSEDIPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEDIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. ExPASy TrEMBL
Match: A0A1S3BR46 (probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103492385 PE=3 SV=1)

HSP 1 Score: 961.8 bits (2485), Expect = 1.1e-276
Identity = 457/493 (92.70%), Postives = 471/493 (95.54%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SIFGGRFN QRI+LKRCVP FFSTYRT+FTV WIAAVATI LWQ T GDGF F R
Sbjct: 1   MMVETSIFGGRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQSTIGDGFFFLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           RVSARPLPRLRP  +NLTDFGAVGDGVTLNT AFE+A+LAISKLR KGGGQLNVP GRWL
Sbjct: 61  RVSARPLPRLRPAVFNLTDFGAVGDGVTLNTNAFEKAILAISKLRTKGGGQLNVPAGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTI+GQGQTWWKKYRQKLLNHTRGPLVQIMWS DI+ISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTISGQGQTWWKKYRQKLLNHTRGPLVQIMWSRDILISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPS+NIRIRNVVLQSMVSAGISIGSEMSGGV GITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVLGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDITYRNLTLD VRVGIVIKTDYNEHPDEGYDPKA+PVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSEDIPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEDIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. ExPASy TrEMBL
Match: A0A5A7UQK3 (Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001450 PE=3 SV=1)

HSP 1 Score: 959.5 bits (2479), Expect = 5.3e-276
Identity = 455/493 (92.29%), Postives = 470/493 (95.33%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SIFGGRFN QRI+LKRCVP FFSTYRT+FTV WIAAVATI LWQ T GDGF   R
Sbjct: 1   MMVETSIFGGRFNNQRIDLKRCVPAFFSTYRTVFTVFWIAAVATIFLWQSTIGDGFFLLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
           RVSARPLPRLRP  +NLTDFGAVGDGVTLNT AFE+A+LAISKLR KGGGQLNVP GRWL
Sbjct: 61  RVSARPLPRLRPAVFNLTDFGAVGDGVTLNTNAFEKAILAISKLRTKGGGQLNVPAGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTI+GQGQTWWKKYRQKLLNHTRGPL QIMWS DI+ISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTISGQGQTWWKKYRQKLLNHTRGPLFQIMWSRDILISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
           GQPS+NIRIRNVVLQSMVSAGISIGSEMSGG+SGITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 GQPSKNIRIRNVVLQSMVSAGISIGSEMSGGISGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDITYRNLTLD VRVGIVIKTDYNEHPDEGYDPKA+PVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDITYRNLTLDTVRVGIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSEDIPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERLIK 
Sbjct: 421 GSEDIPVRNVTFRDMSVGITYKKKHIFQCAFVHGRVIGTIFPAPCDNLDRYDEQERLIKR 480

Query: 481 SAAQNATDIDYDF 494
           SA+QNATDIDYDF
Sbjct: 481 SASQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. ExPASy TrEMBL
Match: A0A6J1JBR3 (probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111485343 PE=3 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 6.9e-276
Identity = 458/493 (92.90%), Postives = 471/493 (95.54%), Query Frame = 0


Query: 1   MMMEGSIFGGRFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTAGDGFLFFR 60
           MM+E SI GGRFN QRI+ KRCVP FFSTYRTLFTVLWIAAVATI LW  T  DGF F R
Sbjct: 1   MMVETSILGGRFNNQRIDFKRCVPAFFSTYRTLFTVLWIAAVATIFLWMSTIRDGFFFLR 60

Query: 61  RVSARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWL 120
            VS+RPLPRLRPVA+NLTDFGAVGDGVTLNT AFERA+LAISKLR+KGGGQLNVP GRWL
Sbjct: 61  PVSSRPLPRLRPVAFNLTDFGAVGDGVTLNTEAFERAILAISKLRSKGGGQLNVPSGRWL 120

Query: 121 TAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180
           TAPFNLTSHMTLFLDE AVILGIQDE YWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD
Sbjct: 121 TAPFNLTSHMTLFLDEDAVILGIQDEKYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRD 180

Query: 181 VVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPY 240
           VVITG+NGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWS DIVISNITLRDSPFWTLHPY
Sbjct: 181 VVITGHNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSRDIVISNITLRDSPFWTLHPY 240

Query: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAY 300
           DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDM+IEDCYISVGDDGIAIKSGWDQYGIAY
Sbjct: 241 DCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAY 300

Query: 301 GQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360
            QPS+NIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY
Sbjct: 301 RQPSKNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGY 360

Query: 361 VQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMH 420
           VQDI+YRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFT IHGQGVRVPVRMH
Sbjct: 361 VQDISYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTSIHGQGVRVPVRMH 420

Query: 421 GSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKH 480
           GSE+IPV+NVTFRDMSVGITYKKKHIFQCAFV GRVIGTIFPAPCDNLDRYDEQERL+K 
Sbjct: 421 GSEEIPVRNVTFRDMSVGITYKKKHIFQCAFVYGRVIGTIFPAPCDNLDRYDEQERLVKR 480

Query: 481 SAAQNATDIDYDF 494
           SAAQNATDIDYDF
Sbjct: 481 SAAQNATDIDYDF 493

[Close]

BLAST of Sed0006361.1 vs. TAIR 10
Match: AT3G42950.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 777.7 bits (2007), Expect = 5.5e-225
Identity = 365/479 (76.20%), Postives = 422/479 (88.10%), Query Frame = 0


Query: 26  FFSTYRTLFTVLWIAAVATILLWQ--GTAGD---GFLFF-------RRVSARPLPRLRPV 85
           F S++++L TV WIA  A++ +WQ  G + +   GF  F         V +   P+LRPV
Sbjct: 5   FLSSHKSLITVFWIATFASLFIWQFGGVSTNLYSGFSLFWSSSSTTTTVFSGGFPKLRPV 64

Query: 86  AYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHMTLF 145
            +NLTDFGAVGDGVT+NT AFE+A+  ISKL  KGGGQLNVPPGRWLTAPFNLTS+MTLF
Sbjct: 65  VFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTLF 124

Query: 146 LDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGYNGTINGQ 205
           L E A IL +QDE YW L+PPLPSYGYGREH GPRYGS IHGQNLRDVV+TG NG+INGQ
Sbjct: 125 LSENAEILALQDEKYWSLLPPLPSYGYGREHHGPRYGSFIHGQNLRDVVVTGNNGSINGQ 184

Query: 206 GQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNVTIL 265
           GQTWWKKYRQKLLNHTRGPLVQIMWSSDIV +NITLRDSPFWTLHPYDCKNVTI N+TIL
Sbjct: 185 GQTWWKKYRQKLLNHTRGPLVQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTIL 244

Query: 266 APVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIRNVV 325
           APV +APNTDGIDPDSCEDM+IE+ YISVGDDGIAIKSGWDQYG  YG+PS+NI IRN++
Sbjct: 245 APVFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLI 304

Query: 326 LQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDV 385
           ++SMVSAGISIGSEMSGGVS ITVEN+++W+SRRGVRIKTAPGRGGYV+DIT+RN+TLD 
Sbjct: 305 IRSMVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDE 364

Query: 386 VRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMHGSEDIPVQNVTFR 445
           +RVGIVIKTDYNEHPD G++P+A P+L++I++TGI+GQGVRVPVR+ GS++IPV+NVTFR
Sbjct: 365 LRVGIVIKTDYNEHPDGGFNPQAFPILENINYTGIYGQGVRVPVRIQGSKEIPVKNVTFR 424

Query: 446 DMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERLIKHSAAQNATDIDYD 493
           DMSVGITYKKKHIFQCA+V+GRVIGTIFPAPCDNLDRYDEQERL+K S +QNATDIDY+
Sbjct: 425 DMSVGITYKKKHIFQCAYVEGRVIGTIFPAPCDNLDRYDEQERLVKQSDSQNATDIDYE 483

[Close]

BLAST of Sed0006361.1 vs. TAIR 10
Match: AT1G19170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 770.4 bits (1988), Expect = 8.8e-223
Identity = 357/495 (72.12%), Postives = 422/495 (85.25%), Query Frame = 0


Query: 11  RFNTQRIELKRCVPGFFSTYRTLFTVLWIAAVATILLWQGTA-----------GDGFLFF 70
           +F+ QR++ KR +    ++++TLFT LWI A  ++ LWQ TA           G  F  F
Sbjct: 11  QFHLQRLDPKRRLTSLLASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGTGPVGGKFTIF 70

Query: 71  RRVS-ARPLPRLRPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKL-RAKGGGQLNVPPG 130
            ++   +P+PRLRPV ++L DFG VGDG TLNT AFERAV++ISKL  + GGGQLNVPPG
Sbjct: 71  GKIKPIQPIPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPG 130

Query: 131 RWLTAPFNLTSHMTLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQN 190
           RWLTAPFNLTSHMTLFL E + ILG++DE YWPLMPPLPSYGYGRE  GPRYGSLIHGQN
Sbjct: 131 RWLTAPFNLTSHMTLFLAEDSEILGVEDEKYWPLMPPLPSYGYGRERPGPRYGSLIHGQN 190

Query: 191 LRDVVITGYNGTINGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTL 250
           L+D+VITG+NGTINGQGQ+WWKK++++LLN+TRGPLVQIMWSSDIVI+NIT+RDSPFWTL
Sbjct: 191 LKDIVITGHNGTINGQGQSWWKKHQRRLLNYTRGPLVQIMWSSDIVIANITMRDSPFWTL 250

Query: 251 HPYDCKNVTIRNVTILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYG 310
           HPYDCKNVTIRNVTILAPV  APNTDGIDPDSCEDMVIEDCYIS GDD IAIKSGWDQ+G
Sbjct: 251 HPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFG 310

Query: 311 IAYGQPSRNIRIRNVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGR 370
           IAYG+PS NI IRN+V++S++SAG+SIGSEMSGG+S +T+EN+++WNSRRG+RIKTAPGR
Sbjct: 311 IAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGR 370

Query: 371 GGYVQDITYRNLTLDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPV 430
           GGY+++ITY+NLTLD VRVGIVIKTDYNEH D+ YD KA P+L   SF GIHGQGVRVPV
Sbjct: 371 GGYIRNITYKNLTLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGVRVPV 430

Query: 431 RMHGSEDIPVQNVTFRDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQERL 490
           R+HGSE IPV+NVTFRDMSVG+TYKKKHIFQC+FV+GRV G+IFP PC+N D YDE+ RL
Sbjct: 431 RIHGSEQIPVRNVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPCENFDVYDEEGRL 490

Query: 491 IKHSAAQNATDIDYD 493
           +K +A  N  DIDYD
Sbjct: 491 VKPAAESNVADIDYD 505

[Close]

BLAST of Sed0006361.1 vs. TAIR 10
Match: AT3G62110.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 410.2 bits (1053), Expect = 2.3e-114
Identity = 197/399 (49.37%), Postives = 280/399 (70.18%), Query Frame = 0


Query: 71  RPVAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHM 130
           RP + ++T+FGAVGDGVTLNT AF+ A+  ++    KGG +L VP G+WLT  F+L SH+
Sbjct: 39  RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98

Query: 131 TLFLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGYNGTI 190
           TL+LD+GA ILG      WP++ PLPSYG GRE  G R+ SLI+GQNL DVVITG NGTI
Sbjct: 99  TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158

Query: 191 NGQGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNV 250
           +GQG  WW  +R   LN+TR  LV++M S+ ++ISN+T  +SPFW +HP  C++V ++N+
Sbjct: 159 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218

Query: 251 TILAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIR 310
           TILAP+ ++PNTDG+DPDS  ++ IEDCYI  GDD ++IKSGWD+YGI+Y +PS  I+I 
Sbjct: 219 TILAPL-ESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKIN 278

Query: 311 NVVLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLT 370
            +  Q+  S+GI+IGSEMSGGVS I ++++ ++NS  G+RIKT+ GRGGYV+++   N+ 
Sbjct: 279 RLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVK 338

Query: 371 LDVVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMHGSEDIPVQNV 430
           LD V+  I     Y EHPDE YDPKA+P ++ I+F  ++G G+ V   + G E    +N+
Sbjct: 339 LDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNI 398

Query: 431 TFRDMSVGI-TYKKKHIFQCAFVQGRVIGTIFPAPCDNL 469
            F ++++ +    KK  ++C+ V+G          CD+L
Sbjct: 399 CFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSL 436

[Close]

BLAST of Sed0006361.1 vs. TAIR 10
Match: AT3G48950.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 5.7e-113
Identity = 196/402 (48.76%), Postives = 267/402 (66.42%), Query Frame = 0


Query: 77  LTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHMTLFLDE 136
           LTDFGAVGDG T NT AF  A+  +S++   GG QL VPPG+WLT  FNLTSH TLF+  
Sbjct: 47  LTDFGAVGDGKTSNTKAFRNAISKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQR 106

Query: 137 GAVILGIQDETYWPLMPPLPSYGYGREHIGP-RYGSLIHGQNLRDVVITGYNGTINGQGQ 196
           GA IL  QDE+ WP++ PLPSYG GR+  G  R+ SLI G NL DVVITG NGTINGQGQ
Sbjct: 107 GATILASQDESEWPVIAPLPSYGKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQ 166

Query: 197 TWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNVTILAP 256
            WW K+++K    TR  L++I++S +I ISNITL DSP W +HP  C +V +++VT+LAP
Sbjct: 167 YWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAP 226

Query: 257 VHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIRNVVLQ 316
           V   PNTDGI+PDSC + +IEDCYI  GDD IA+KSGWDQYGI +G P++ + IR +   
Sbjct: 227 V-TVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCI 286

Query: 317 SMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDVVR 376
           S  SAG+++GSEMSGG+  + +E+V + N+   +RIKTA GRG YV+DI  R +T+  ++
Sbjct: 287 SPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMK 346

Query: 377 VGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMHGSEDIPVQNVTFRDM 436
               +  +Y  HPDEG+DPKA+P + +I++  +  + V +   + G +  P   +   ++
Sbjct: 347 YVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNV 406

Query: 437 SVGITYK-KKHIFQCAFVQGRVIGTIFPAPCDNLDRYDEQER 477
           ++ +  K KK  + C  V G V   + P PC  L     Q +
Sbjct: 407 TIALAAKAKKMQWNCTDVAG-VTSRVTPEPCSLLPEKKAQAK 446

[Close]

BLAST of Sed0006361.1 vs. TAIR 10
Match: AT4G33440.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 5.7e-113
Identity = 200/396 (50.51%), Postives = 269/396 (67.93%), Query Frame = 0


Query: 73  VAYNLTDFGAVGDGVTLNTVAFERAVLAISKLRAKGGGQLNVPPGRWLTAPFNLTSHMTL 132
           +  ++TDFG VGDG T NT AF RAV  +    A+GG QLNVP G WL+  FNLTS+ TL
Sbjct: 70  IVMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTL 129

Query: 133 FLDEGAVILGIQDETYWPLMPPLPSYGYGREHIGPRYGSLIHGQNLRDVVITGYNGTING 192
           FL+ GA+ILG +D   WP++ PLPSYG GRE  G R+ SLIHG NL +VVITG NGTI+G
Sbjct: 130 FLERGALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDG 189

Query: 193 QGQTWWKKYRQKLLNHTRGPLVQIMWSSDIVISNITLRDSPFWTLHPYDCKNVTIRNVTI 252
           QG+ WW+ +  + L HTRG L+++  S +I+ISN+TL +SPFWT+HP  C NV IRN+TI
Sbjct: 190 QGKMWWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTI 249

Query: 253 LAPVHDAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYGQPSRNIRIRNV 312
           LAP+ +APNTDGIDPDS  ++ IEDCYI  GDD +A+KSGWDQYG+A  +PS NI IR +
Sbjct: 250 LAPM-NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRI 309

Query: 313 VLQSMVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLD 372
              +   +G+ IGSEMSGG+  ITVE++ VW+S  G+RIKT  GRGGY+ +IT+ N+ L+
Sbjct: 310 SGTTRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLE 369

Query: 373 VVRVGIVIKTDYNEHPDEGYDPKAVPVLKDISFTGIHGQGVRVPVRMHGSEDIPVQNVTF 432
            V+V I   +  N+H D+ +DPKA+P +K I  + +     R    + G E    Q+V  
Sbjct: 370 KVKVPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCL 429

Query: 433 RDMSVGITYKKKHIFQCAFVQGRVIGTIFPAPCDNL 469
           R++++ +   K   ++C  V G     +FP  C  L
Sbjct: 430 RNVTL-LGLPKTEKWKCKDVSG-YASDVFPLSCPQL 462

The following BLAST results are available for this feature:

BLAST of Sed0006361.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879850.1	6.9e-278	92.49	probable polygalacturonase [Benincasa hispida]	[more]
XP_022147646.1	4.5e-277	92.49	probable polygalacturonase [Momordica charantia]	[more]
XP_008450948.1	2.2e-276	92.70	PREDICTED: probable polygalacturonase [Cucumis melo] >TYK10010.1 putative polyga...	[more]
KAA0055759.1	1.1e-275	92.29	putative polygalacturonase [Cucumis melo var. makuwa]	[more]
XP_022987942.1	1.4e-275	92.90	probable polygalacturonase [Cucurbita maxima]	[more]

BLAST of Sed0006361.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7PZL3	2.0e-107	47.72	Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 ...	[more]
Q9LW07	3.4e-30	33.06	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g1572...	[more]
Q8RY29	3.0e-26	27.25	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]
P27644	1.1e-23	40.24	Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1	[more]
P05117	3.5e-22	25.33	Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1	[more]

BLAST of Sed0006361.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D302	2.2e-277	92.49	probable polygalacturonase OS=Momordica charantia OX=3673 GN=LOC111016517 PE=3 S...	[more]
A0A5D3CF90	1.1e-276	92.70	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BR46	1.1e-276	92.70	probable polygalacturonase OS=Cucumis melo OX=3656 GN=LOC103492385 PE=3 SV=1	[more]
A0A5A7UQK3	5.3e-276	92.29	Putative polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A6J1JBR3	6.9e-276	92.90	probable polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111485343 PE=3 SV=1	[more]

BLAST of Sed0006361.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42950.1	5.5e-225	76.20	Pectin lyase-like superfamily protein	[more]
AT1G19170.1	8.8e-223	72.12	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	2.3e-114	49.37	Pectin lyase-like superfamily protein	[more]
AT3G48950.1	5.7e-113	48.76	Pectin lyase-like superfamily protein	[more]
AT4G33440.1	5.7e-113	50.51	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 304..326 e-value: 97.0 score: 11.8 coord: 270..291 e-value: 13.0 score: 14.7 coord: 422..443 e-value: 1700.0 score: 5.6 coord: 361..382 e-value: 710.0 score: 8.3 coord: 242..269 e-value: 37.0 score: 13.2 coord: 332..353 e-value: 1.6 score: 17.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 171..452 e-value: 2.0E-50 score: 171.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 61..455 e-value: 3.9E-125 score: 420.1
None	No IPR available	PANTHER	PTHR31339:SF44	POLYGALACTURONASE-RELATED	coord: 23..491
None	No IPR available	PANTHER	PTHR31339	PECTIN LYASE-RELATED	coord: 23..491
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 65..466

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006361	Sed0006361	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006361.1-five_prime_utr	Sed0006361.1-five_prime_utr-LG08:7974043..7974409	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006361.1-exon	Sed0006361.1-exon-LG08:7974043..7974841	exon
Sed0006361.1-exon	Sed0006361.1-exon-LG08:7979976..7980096	exon
Sed0006361.1-exon	Sed0006361.1-exon-LG08:7980544..7980792	exon
Sed0006361.1-exon	Sed0006361.1-exon-LG08:7981893..7982046	exon
Sed0006361.1-exon	Sed0006361.1-exon-LG08:7982143..7982947	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006361.1-cds	Sed0006361.1-cds-LG08:7974410..7974841	CDS
Sed0006361.1-cds	Sed0006361.1-cds-LG08:7979976..7980096	CDS
Sed0006361.1-cds	Sed0006361.1-cds-LG08:7980544..7980792	CDS
Sed0006361.1-cds	Sed0006361.1-cds-LG08:7981893..7982046	CDS
Sed0006361.1-cds	Sed0006361.1-cds-LG08:7982143..7982668	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006361.1-three_prime_utr	Sed0006361.1-three_prime_utr-LG08:7982669..7982947	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006361.1	Sed0006361.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004650	polygalacturonase activity