Sed0006300.1 (mRNA) Chayote v1

Overview


Name	Sed0006300.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Serine hydroxymethyltransferase
Location	LG09: 1397467 .. 1400710 (-)
Sequence length	1783
RNA-Seq Expression	Sed0006300.1
Synteny	Sed0006300.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCATAAAACTCCATTTCAGTTCTTGCCTTGCCTCCATTTTCATCTTCTTCATCTTCATCACATTCTCTGTAAATTTCTCGATCTCGTCCGCCATGGATCCAGTCAAAGCTTGGGGCAACACTCCTCTCGAAACCGTCGATTCCGAGATCTTCGATCTCATCGAGAAGGAGAAGCGCCGCCAATGCCGCGGAATCGAGCTCATCGCCTCCGAGAATTTCACCTCCTTCGCCGTCATCGAAGCTCTCGGCAGCGCCCTCACCAACAAGTACTCCGAGGGCATGCCGGGCAACCGATACTACGGCGGCAACGAGTTCATCGACCAGATCGAGAATCTCTGCCGTTCGCGAGCCCTAGAAGCCTTCCATGTCGATCCAGCCAAATGGGGCGTGAATGTCCAGCCGTACTCTGGATCTCCGGCGAATTTCGCCGCCTACACGGCGTTGCTTCAGCCGCACGACCGGATTATGGGGCTGGATCTTCCTTCCGGTGGTCATTTGACGCATGGCTACTACACCTCCGGCGGGAAGAAGATCTCCGCTACGTCGATCTATTTCGAGAGTTTGCCTTACAAGGTTGATTCTGTCACTGGATTTATCGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATCATCTGTGGTGGCAGTGCGTACCCTAGGGATTGGGATTACTCCAGATTTAGGGCAGTTGCTGACAAATGTGGCGCGCTTTTGCTTTGTGATATGGCTCACATTAGTGGACTCGTTGCTGCTCAGGTATATTGCTCAAATTATTCTATGAATTCGAGTTCAGATCTTTCATTAATTTGTGTTTGATGTTGTTTTTTTTTCATTTCTGGATTTGGATCTACTGGGTCTATGTTGAATTTGCTTTTCTCTTTGATATAGCTTCATGTGTTCATACTTGTCTTTTGTATTTGTGTTCCAATTGATTAGAAACGGCTTAGAAATGGCACATGTTCTTAGATCCATAATTGTTTGAGCATTTTACGTAAAGCGATCTGGCTTTTTGAGACTTGTTTAATGATTAATTATTGATGCTGCATTGCTTCTTTGTAATGGAAGATTAACTGTGTTTTCTTGTATAAACTTATTCAAAAACATATTCCTTGTCTTTTACCATAAGATTAAGCTTTACGTGCTAGTTTATTAGAGAATACGGGGTTTCAAAACCAATTGCCAATGAGGAGAGTAACTCATATCAGATGACAGCCATATCAGGAAATGCCATTTTGAATTGGAACCTAATTTGTGGACCGAAATACCCGTTTTGGCTTACTCGCATGGGTTGAATCTGAACTTTTTGGGATCAAATACCCGCTTGGGTGGGTCCAAACTACCATATTAGAGAATATGAAGTTCCACCTCAAAATCAATTGGCAATGAAGATAGTAATCCACATCACTTATAAAGGTGTTGTAGAATTCTCACCTTTTTAACGTGGGACAATTACCACAAGGTGAGTATCTCCAACATAGTTGAATATTGAGATCTAGATCTACTTAGATAAAACTTCTAGTTGTACTCAATTTCAACGTAGCCATGGAGTTATCTAGTGGTCAAGAAGGCCATGGGGAGCGGAGCTAAAGATATAATGGGTTAATCCATTGTGGTTACCTACCTAGAAATTAATTTTCTACCTATTTTTTTGATTTTGTAATGTTGTAGGGTTAGACGGTATGTCCTGGGACATTAATCTGAGTGCATGCAAGCCAGCCCAGATATTCACGATTATAAAAAAAAATGTTGTATTCAATGTAAAATGAATCATCTATCCAATTATTATTTTTTGTTTTGAACTTAGGTTACGTTTCCTTGTATAAACTTATTCAAAAACATATTCCTTTCAAGACATTATGATTTGTTTTTGAGATTACAACAATTGAGGGTAGGGGGATTCGAACTCATGGTCAATGGGTGTACGCTGATGTCACCGAGCTACTCCTCTTGTTGGCGTTATGTTTGGTGTTATATTTGTTTCTTTCTTTGTAACTTAAGTGACTTGGGTCTGTCTGGTATTGTAAATTGATAATGTCCGATGATTGTTTCCAGGAAGCTGCAAATCCGTTCGAGTATTGTGACGTTGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCGAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCCCCCAAGAAGGGTCAGCCAGAGGATGCTGTATATGACTTTGAAGACAAGATCAACTTCTCTGTTTTCCCAGCCCTTCAAGGTGGCCCTCACAATCACCAAATTGGTGCTTTAGCAGTTGCCTTGAAGCAGGCTATGACCCCCGGGTTCAAGGCCTATGCAAAACAAGTTAAGGCCAATGCCGTGGCCCTCGGAAACTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAACCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACTGGTAATTTCATGCAAATCACCTTAAGAAATCTAATAGAAAGAAGTGTCCTGTTCTGTTTGTGTAACAAATTCCTTTTGCAGGCAACAAGGTTGAGAAGCTTTGTGACTTGTGCAACATTACTGTGAACAAGAATGCCGTGTTCGGCGACAGCAGTGCATTGGCTCCCGGAGGTGTTCGAATCGGTAAGACTCGATATCATTAGAACATGTTTCATTTCATAATCTATGAGTGGCTATTGATTTTGATGACATCGAATCGTGATGTTAGGTGCACCTGCCATGACATCGAGAGGTTTGGTCGAGAAAGACTTTGAACAGATCGCGGAGTTCCTTCACCGTGCTGTAACCATGACCTTGAGCATCCAGAAGGAATATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGGGAACAACAAAGAAATCGAAACACTGAAGGCCGACGTCGAGAAATTCTCTGGCTCATTCGACATGCCCGGTTTCCTCATGTCCGAGATGAAGTACAAGGACTAGAAAGCAAACAAGAAGATTATCTGGAAACTAATAAAGTTTTGGGTGTTTGTTGAATCTTTTATCTTTTAAAGTAAAAATGAAAAGGTTGGCGTTTGTGTGTTAATTGTTTTTTTTCTCAAGTTTGTATGTAGGCTAGATTTTCCTTCACGAATATTCATTCGAAAGTTTTATGTTGAGAAAATATCGAGTTCTAATTTTCGTACCAATAATCATGGTTTCTTTTATATTAATTTATTTTAGGAAAATTGTATGGGATGAGCTTTCCTCGCA

mRNA sequence

AAAACCCATAAAACTCCATTTCAGTTCTTGCCTTGCCTCCATTTTCATCTTCTTCATCTTCATCACATTCTCTGTAAATTTCTCGATCTCGTCCGCCATGGATCCAGTCAAAGCTTGGGGCAACACTCCTCTCGAAACCGTCGATTCCGAGATCTTCGATCTCATCGAGAAGGAGAAGCGCCGCCAATGCCGCGGAATCGAGCTCATCGCCTCCGAGAATTTCACCTCCTTCGCCGTCATCGAAGCTCTCGGCAGCGCCCTCACCAACAAGTACTCCGAGGGCATGCCGGGCAACCGATACTACGGCGGCAACGAGTTCATCGACCAGATCGAGAATCTCTGCCGTTCGCGAGCCCTAGAAGCCTTCCATGTCGATCCAGCCAAATGGGGCGTGAATGTCCAGCCGTACTCTGGATCTCCGGCGAATTTCGCCGCCTACACGGCGTTGCTTCAGCCGCACGACCGGATTATGGGGCTGGATCTTCCTTCCGGTGGTCATTTGACGCATGGCTACTACACCTCCGGCGGGAAGAAGATCTCCGCTACGTCGATCTATTTCGAGAGTTTGCCTTACAAGGTTGATTCTGTCACTGGATTTATCGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATCATCTGTGGTGGCAGTGCGTACCCTAGGGATTGGGATTACTCCAGATTTAGGGCAGTTGCTGACAAATGTGGCGCGCTTTTGCTTTGTGATATGGCTCACATTAGTGGACTCGTTGCTGCTCAGGAAGCTGCAAATCCGTTCGAGTATTGTGACGTTGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCGAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCCCCCAAGAAGGGTCAGCCAGAGGATGCTGTATATGACTTTGAAGACAAGATCAACTTCTCTGTTTTCCCAGCCCTTCAAGGTGGCCCTCACAATCACCAAATTGGTGCTTTAGCAGTTGCCTTGAAGCAGGCTATGACCCCCGGGTTCAAGGCCTATGCAAAACAAGTTAAGGCCAATGCCGTGGCCCTCGGAAACTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAACCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACTGGCAACAAGGTTGAGAAGCTTTGTGACTTGTGCAACATTACTGTGAACAAGAATGCCGTGTTCGGCGACAGCAGTGCATTGGCTCCCGGAGGTGTTCGAATCGGTGCACCTGCCATGACATCGAGAGGTTTGGTCGAGAAAGACTTTGAACAGATCGCGGAGTTCCTTCACCGTGCTGTAACCATGACCTTGAGCATCCAGAAGGAATATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGGGAACAACAAAGAAATCGAAACACTGAAGGCCGACGTCGAGAAATTCTCTGGCTCATTCGACATGCCCGGTTTCCTCATGTCCGAGATGAAGTACAAGGACTAGAAAGCAAACAAGAAGATTATCTGGAAACTAATAAAGTTTTGGGTGTTTGTTGAATCTTTTATCTTTTAAAGTAAAAATGAAAAGGTTGGCGTTTGTGTGTTAATTGTTTTTTTTCTCAAGTTTGTATGTAGGCTAGATTTTCCTTCACGAATATTCATTCGAAAGTTTTATGTTGAGAAAATATCGAGTTCTAATTTTCGTACCAATAATCATGGTTTCTTTTATATTAATTTATTTTAGGAAAATTGTATGGGATGAGCTTTCCTCGCA

Coding sequence (CDS)

ATGGATCCAGTCAAAGCTTGGGGCAACACTCCTCTCGAAACCGTCGATTCCGAGATCTTCGATCTCATCGAGAAGGAGAAGCGCCGCCAATGCCGCGGAATCGAGCTCATCGCCTCCGAGAATTTCACCTCCTTCGCCGTCATCGAAGCTCTCGGCAGCGCCCTCACCAACAAGTACTCCGAGGGCATGCCGGGCAACCGATACTACGGCGGCAACGAGTTCATCGACCAGATCGAGAATCTCTGCCGTTCGCGAGCCCTAGAAGCCTTCCATGTCGATCCAGCCAAATGGGGCGTGAATGTCCAGCCGTACTCTGGATCTCCGGCGAATTTCGCCGCCTACACGGCGTTGCTTCAGCCGCACGACCGGATTATGGGGCTGGATCTTCCTTCCGGTGGTCATTTGACGCATGGCTACTACACCTCCGGCGGGAAGAAGATCTCCGCTACGTCGATCTATTTCGAGAGTTTGCCTTACAAGGTTGATTCTGTCACTGGATTTATCGATTACGATAAGTTGGAGGAGAAGGCTTTGGATTTCAGGCCGAAGTTGATCATCTGTGGTGGCAGTGCGTACCCTAGGGATTGGGATTACTCCAGATTTAGGGCAGTTGCTGACAAATGTGGCGCGCTTTTGCTTTGTGATATGGCTCACATTAGTGGACTCGTTGCTGCTCAGGAAGCTGCAAATCCGTTCGAGTATTGTGACGTTGTGACGACCACGACTCACAAGAGTTTGAGGGGTCCGAGGGCTGGTATGATCTTCTATAGGAAGGGTCCAAAGCCCCCCAAGAAGGGTCAGCCAGAGGATGCTGTATATGACTTTGAAGACAAGATCAACTTCTCTGTTTTCCCAGCCCTTCAAGGTGGCCCTCACAATCACCAAATTGGTGCTTTAGCAGTTGCCTTGAAGCAGGCTATGACCCCCGGGTTCAAGGCCTATGCAAAACAAGTTAAGGCCAATGCCGTGGCCCTCGGAAACTACCTGATGAACAAGGGCTACAAGCTTGTCACCGGAGGAACCGAGAACCATCTCGTTCTCTGGGATCTTCGTCCTTTGGGATTGACTGGCAACAAGGTTGAGAAGCTTTGTGACTTGTGCAACATTACTGTGAACAAGAATGCCGTGTTCGGCGACAGCAGTGCATTGGCTCCCGGAGGTGTTCGAATCGGTGCACCTGCCATGACATCGAGAGGTTTGGTCGAGAAAGACTTTGAACAGATCGCGGAGTTCCTTCACCGTGCTGTAACCATGACCTTGAGCATCCAGAAGGAATATGGAAAGCTGTTGAAGGACTTCAACAAGGGTCTGGGGAACAACAAAGAAATCGAAACACTGAAGGCCGACGTCGAGAAATTCTCTGGCTCATTCGACATGCCCGGTTTCCTCATGTCCGAGATGAAGTACAAGGACTAG

Protein sequence

MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTLSIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD

Homology

[Close]

BLAST of Sed0006300.1 vs. NCBI nr
Match: XP_004138967.1 (serine hydroxymethyltransferase 4 [Cucumis sativus] >KGN61489.1 hypothetical protein Csa_006275 [Cucumis sativus])

HSP 1 Score: 943.3 bits (2437), Expect = 7.8e-271
Identity = 453/471 (96.18%), Postives = 462/471 (98.09%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV  WGNTPL TVD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRAL+AFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKEYGKLLKDFNKGL NNKEIE LKADVEKFSGSFDMPGFLMSEMKYKD
Sbjct: 421 NVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. NCBI nr
Match: XP_022138598.1 (serine hydroxymethyltransferase 4 [Momordica charantia])

HSP 1 Score: 942.6 bits (2435), Expect = 1.3e-270
Identity = 453/471 (96.18%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+PV AWGNTPL+ VD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVNAWGNTPLKAVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRALEAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHADPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           +IQKEYGKLLKDFNKGL NNK+IE LKADVEKFSGSFDMPGF MSEMKYKD
Sbjct: 421 NIQKEYGKLLKDFNKGLVNNKDIEGLKADVEKFSGSFDMPGFAMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. NCBI nr
Match: XP_022959093.1 (serine hydroxymethyltransferase 4-like [Cucurbita moschata] >KAG6574849.1 Serine hydroxymethyltransferase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 942.2 bits (2434), Expect = 1.7e-270
Identity = 453/471 (96.18%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV AWGNTPL  VD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE+AVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKE+GKLLKDFNKGL NNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. NCBI nr
Match: XP_023006191.1 (serine hydroxymethyltransferase 4-like [Cucurbita maxima])

HSP 1 Score: 941.8 bits (2433), Expect = 2.3e-270
Identity = 452/471 (95.97%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV AWGNTPL  VD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRAL+AFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKE+GKLLKDFNKGL NNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. NCBI nr
Match: XP_038875387.1 (serine hydroxymethyltransferase 4 [Benincasa hispida])

HSP 1 Score: 941.0 bits (2431), Expect = 3.9e-270
Identity = 452/471 (95.97%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+ V AWGNTPL TVD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MESVNAWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRAL+AFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIG PAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKE+GKLLKDFNKGL NNKEIE LKADVEKFSGSFDMPGFLMSEMKYKD
Sbjct: 421 NVQKEHGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. ExPASy Swiss-Prot
Match: O23254 (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=SHM4 PE=1 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 9.3e-259
Identity = 428/471 (90.87%), Postives = 450/471 (95.54%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+PV +WGNT L +VD EI DLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFID+IENLCRSRALEAFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDY+RFRA+ADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA TPGFK YAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFL RAVT+TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
            IQK YGKLLKDFNKGL NNK+++ LKADVEKFS S++MPGFLMSEMKYKD
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. ExPASy Swiss-Prot
Match: Q9SVM4 (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=SHM5 PE=3 SV=1)

HSP 1 Score: 808.5 bits (2087), Expect = 3.9e-233
Identity = 380/468 (81.20%), Postives = 426/468 (91.03%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+PV +WGNT L+ VD EI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFID+IE+LCRSR+LEAFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDY+RFRAVADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M P FK YAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG PAMTSRGLVEKDFE+I EFLHRAVT+TL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMK 469
            IQ++YGK++KDFNKGL NNKEI+ +KADVE+F+  FDMPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468

[Close]

BLAST of Sed0006300.1 vs. ExPASy Swiss-Prot
Match: Q84WV0 (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=SHM7 PE=2 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 1.2e-178
Identity = 292/466 (62.66%), Postives = 370/466 (79.40%), Query Frame = 0


Query: 4   VKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 63
           V+AWG+ P+   D +I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189

Query: 64  PGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++IDQIENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TG+IDYDKLE+KALD+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309

Query: 184 LIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDWD++R R +ADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369

Query: 244 KSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           K LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429

Query: 304 LAVALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQ  TP +KAY +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG 
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTM 423
             EK+C++C+IT+NK A+FGD+  ++PGGVRIG PAMT+RG +E DFE +A+FL +A  +
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549

Query: 424 TLSIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLM 465
           T ++Q+E+GK  K+F K L  NK+I  L+  VE F+  ++MP  L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595

[Close]

BLAST of Sed0006300.1 vs. ExPASy Swiss-Prot
Match: Q9LM59 (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=SHM6 PE=2 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 5.2e-177
Identity = 294/466 (63.09%), Postives = 370/466 (79.40%), Query Frame = 0


Query: 4   VKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 63
           V+AWGN  +E  D EI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++IDQIE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TG+IDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR +ADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA +P +K Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTM 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG+PAMTSRG +E +FE +A+FL+RA  +
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553

Query: 424 TLSIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLM 465
             + Q+E+GKL K+  K + + KEI  L+  VE F+  F MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of Sed0006300.1 vs. ExPASy Swiss-Prot
Match: Q54Z26 (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=shmt1 PE=1 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.1e-174
Identity = 297/454 (65.42%), Postives = 364/454 (80.18%), Query Frame = 0


Query: 8   GNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNR 67
           GNTPL+ VD+EIF+L+ +EK RQ +G+ELIASENFTS AV+EALGS  TNKY+EG PG+R
Sbjct: 6   GNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSR 65

Query: 68  YYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGL 127
           YYGG E +D++E LC+ RAL+AF +D +KWGVNVQPYSGSPANFA YTALL+PHDRIMGL
Sbjct: 66  YYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGL 125

Query: 128 DLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPKLIIC 187
           DLPSGGHLTHGY T   KKISA+SI+FES+PY++    G IDY +LEE AL F+PKLII 
Sbjct: 126 DLPSGGHLTHGYQTD-KKKISASSIFFESMPYQI-GADGLIDYQRLEENALLFKPKLIIS 185

Query: 188 GGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLR 247
           G SAYPR+WDY R RA+ADK GA L+CDMAH SGLVAAQ   +PF+YCDVVT+TTHK+LR
Sbjct: 186 GASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLR 245

Query: 248 GPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAM 307
           GPR+G+IF+R+G +    G+ E   YD E KINF+VFP+LQGGPH + I  +AVALK+A 
Sbjct: 246 GPRSGIIFFRRGKRVDGNGK-EIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEAD 305

Query: 308 TPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLC 367
           +  FK YA QVK NA A+GN LMNKGYKLVT GT+NHL+LWDLRP  LTGNK EK  D+ 
Sbjct: 306 SQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIA 365

Query: 368 NITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTLSIQKEYG 427
           NITVNKNAV GD++A++PGG+RIG+ A+TSRGL E DFE+IA+FL R V+++L IQ   G
Sbjct: 366 NITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVG 425

Query: 428 KLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPG 462
           K L DF   +  +KE+  L+ +VE+FS  F +PG
Sbjct: 426 KKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456

[Close]

BLAST of Sed0006300.1 vs. ExPASy TrEMBL
Match: A0A0A0LKC8 (Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G145880 PE=3 SV=1)

HSP 1 Score: 943.3 bits (2437), Expect = 3.8e-271
Identity = 453/471 (96.18%), Postives = 462/471 (98.09%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV  WGNTPL TVD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRAL+AFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHCDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMAPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKEYGKLLKDFNKGL NNKEIE LKADVEKFSGSFDMPGFLMSEMKYKD
Sbjct: 421 NVQKEYGKLLKDFNKGLVNNKEIEKLKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. ExPASy TrEMBL
Match: A0A6J1CDF6 (Serine hydroxymethyltransferase OS=Momordica charantia OX=3673 GN=LOC111009716 PE=3 SV=1)

HSP 1 Score: 942.6 bits (2435), Expect = 6.4e-271
Identity = 453/471 (96.18%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+PV AWGNTPL+ VD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVNAWGNTPLKAVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRALEAFH DPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHADPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           +IQKEYGKLLKDFNKGL NNK+IE LKADVEKFSGSFDMPGF MSEMKYKD
Sbjct: 421 NIQKEYGKLLKDFNKGLVNNKDIEGLKADVEKFSGSFDMPGFAMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. ExPASy TrEMBL
Match: A0A6J1H4Y7 (Serine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460192 PE=3 SV=1)

HSP 1 Score: 942.2 bits (2434), Expect = 8.4e-271
Identity = 453/471 (96.18%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV AWGNTPL  VD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE+AVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKE+GKLLKDFNKGL NNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. ExPASy TrEMBL
Match: A0A6J1KX34 (Serine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499000 PE=3 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.1e-270
Identity = 452/471 (95.97%), Postives = 463/471 (98.30%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV AWGNTPL  VD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGS+LTNKYS
Sbjct: 1   MDPVNAWGNTPLVNVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSSLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRAL+AFHVDPAKWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TGFIDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSATGFIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFK YAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKVYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           ++QKE+GKLLKDFNKGL NNKEIE LKADVEKFSGSF+MPGFLMSEMKYKD
Sbjct: 421 NVQKEHGKLLKDFNKGLVNNKEIEALKADVEKFSGSFEMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. ExPASy TrEMBL
Match: A0A5A7SVK0 (Serine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00690 PE=3 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 5.4e-270
Identity = 452/471 (95.97%), Postives = 461/471 (97.88%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           MDPV  WGNTPL TVD EIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MDPVNDWGNTPLNTVDPEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGGNEFID+IENLCRSRAL+AF  DP KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGNEFIDEIENLCRSRALQAFRCDPTKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDS TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGGSAYPRDWDY+RFRA+ADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLIICGGSAYPRDWDYARFRAIADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYD+EDKINFSVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDYEDKINFSVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQAM+PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQAMSPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVT+TL
Sbjct: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
           +IQKEYGKLLKDFNKGL NNKEIE LKADVEKFSGSFDMPGFLMSEMKYKD
Sbjct: 421 NIQKEYGKLLKDFNKGLVNNKEIEELKADVEKFSGSFDMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. TAIR 10
Match: AT4G13930.1 (serine hydroxymethyltransferase 4 )

HSP 1 Score: 893.6 bits (2308), Expect = 6.6e-260
Identity = 428/471 (90.87%), Postives = 450/471 (95.54%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+PV +WGNT L +VD EI DLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1   MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EG+PGNRYYGGNEFID+IENLCRSRALEAFH DPA WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV+  TG+IDYDKLEEKALDF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKL+ICGGSAYPRDWDY+RFRA+ADK GALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           TTHKSLRGPRAGMIFYRKGPKPPKKGQPE AVYDFEDKINF+VFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQA TPGFK YAKQVKANAVALGNYLM+KGY++VT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EKLCDLC+IT+NKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQI EFL RAVT+TL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
            IQK YGKLLKDFNKGL NNK+++ LKADVEKFS S++MPGFLMSEMKYKD
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD 471

[Close]

BLAST of Sed0006300.1 vs. TAIR 10
Match: AT4G13890.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein )

HSP 1 Score: 808.5 bits (2087), Expect = 2.8e-234
Identity = 380/468 (81.20%), Postives = 426/468 (91.03%), Query Frame = 0


Query: 1   MDPVKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
           M+PV +WGNT L+ VD EI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1   MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60

Query: 61  EGMPGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQP 120
           EGMPGNRYYGG EFID+IE+LCRSR+LEAFH +P KWGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61  EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120

Query: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDF 180
           HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKVDS TG+IDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180

Query: 181 RPKLIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
           RPKLIICGG++YPR+WDY+RFRAVADK GA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240

Query: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALA 300
           +THKSLRGPRAGMIFYRKGPKP KKGQPE  VYDF+ KIN +VFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300

Query: 301 VALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKV 360
           VALKQ M P FK YAKQVKANA  L +YL+NKGY LVT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360

Query: 361 EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTL 420
           EK+C+LC IT+N+NAVFGD+S LAPGGVRIG PAMTSRGLVEKDFE+I EFLHRAVT+TL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420

Query: 421 SIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLMSEMK 469
            IQ++YGK++KDFNKGL NNKEI+ +KADVE+F+  FDMPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468

[Close]

BLAST of Sed0006300.1 vs. TAIR 10
Match: AT1G36370.1 (serine hydroxymethyltransferase 7 )

HSP 1 Score: 627.5 bits (1617), Expect = 8.8e-180
Identity = 292/466 (62.66%), Postives = 370/466 (79.40%), Query Frame = 0


Query: 4   VKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 63
           V+AWG+ P+   D +I +L+EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189

Query: 64  PGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++IDQIENLC  RAL AF ++  KWGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGY T GGKKISA SI+FES PYKV+  TG+IDYDKLE+KALD+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309

Query: 184 LIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDWD++R R +ADKCGA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369

Query: 244 KSLRGPRAGMIFYRKGPKPPKKGQ-----PEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           K LRGPR G+IFYR+GPK  K+G           YD E+KINF+VFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429

Query: 304 LAVALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQ  TP +KAY +Q+K NA AL   L+ +  +LVTGGT+NHL+LWDL P+GLTG 
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTM 423
             EK+C++C+IT+NK A+FGD+  ++PGGVRIG PAMT+RG +E DFE +A+FL +A  +
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549

Query: 424 TLSIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLM 465
           T ++Q+E+GK  K+F K L  NK+I  L+  VE F+  ++MP  L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595

[Close]

BLAST of Sed0006300.1 vs. TAIR 10
Match: AT1G22020.1 (serine hydroxymethyltransferase 6 )

HSP 1 Score: 622.1 bits (1603), Expect = 3.7e-178
Identity = 294/466 (63.09%), Postives = 370/466 (79.40%), Query Frame = 0


Query: 4   VKAWGNTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 63
           V+AWGN  +E  D EI + +EKEK+RQ RGIELIASENF   AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193

Query: 64  PGNRYYGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDR 123
           PG RYY GN++IDQIE LC+ RAL AF ++  KWGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253

Query: 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPK 183
           IMGLD PSGGH++HGYYT GGKK+S  SI+FES PYKVD  TG+IDYDKLEEKALD+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313

Query: 184 LIICGGSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 243
           ++ICGGS+YPRDW++ RFR +ADKCGA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373

Query: 244 KSLRGPRAGMIFYRKGPKPPKKG-----QPEDAVYDFEDKINFSVFPALQGGPHNHQIGA 303
           KSLRGPR G+IFY++G KP K+         +  YDFE+KINFSVFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433

Query: 304 LAVALKQAMTPGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGN 363
           LA+ALKQA +P +K Y +QVK NA AL + L+++  KL+TGGT+NHL+LWDL PLGLTG 
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493

Query: 364 KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTM 423
             EK+C++C+ITVNK A+F ++  ++PGGVRIG+PAMTSRG +E +FE +A+FL+RA  +
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553

Query: 424 TLSIQKEYGKLLKDFNKGLGNNKEIETLKADVEKFSGSFDMPGFLM 465
             + Q+E+GKL K+  K + + KEI  L+  VE F+  F MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599

[Close]

BLAST of Sed0006300.1 vs. TAIR 10
Match: AT4G37930.1 (serine transhydroxymethyltransferase 1 )

HSP 1 Score: 558.9 bits (1439), Expect = 3.8e-159
Identity = 277/468 (59.19%), Postives = 349/468 (74.57%), Query Frame = 0


Query: 9   NTPLETVDSEIFDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 68
           N PLE VD EI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 52  NAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 111

Query: 69  YGGNEFIDQIENLCRSRALEAFHVDPAKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 128
           YGGNE+ID  E LC+ RALEAF +DP KWGVNVQP SGSPANF  YTALL+PH+RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALD 171

Query: 129 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVDSVTGFIDYDKLEEKALDFRPKLIICG 188
           LP GGHL+HGY T   KKISA SI+FE++PY++D  TG+IDYD++E+ A  FRPKLI+ G
Sbjct: 172 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAG 231

Query: 189 GSAYPRDWDYSRFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 248
            SAY R +DY+R R V +K  A++L DMAHISGLVAA    +PF+Y DVVTTTTHKSLRG
Sbjct: 232 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRG 291

Query: 249 PRAGMIFYRKGPKPPKKGQPEDAVYDFEDKINFSVFPALQGGPHNHQIGALAVALKQAMT 308
           PR  MIF+RKG K   K Q ++ +YDFEDKIN +VFP LQGGPHNH I  LAVALKQA T
Sbjct: 292 PRGAMIFFRKGVKEINK-QGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATT 351

Query: 309 PGFKAYAKQVKANAVALGNYLMNKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCN 368
             +KAY +QV +N+      LM +GY+LV+GGT+NHLVL +L+P G+ G++VEK+ +  +
Sbjct: 352 SEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVH 411

Query: 369 ITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIAEFLHRAVTMTLSIQKE-YG 428
           I  NKN V GD SA+ PGG+R+G PA+TSRG VE+DF ++AE+  +AVT+ L ++ E  G
Sbjct: 412 IASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQG 471

Query: 429 KLLKDFNKGLGNN----KEIETLKADVEKFSGSFDMPGFLMSEMKYKD 472
             LKDF   + ++     EI  L+ +VE+F+  F   GF    MKYK+
Sbjct: 472 TKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517

The following BLAST results are available for this feature:

BLAST of Sed0006300.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138967.1	7.8e-271	96.18	serine hydroxymethyltransferase 4 [Cucumis sativus] >KGN61489.1 hypothetical pro...	[more]
XP_022138598.1	1.3e-270	96.18	serine hydroxymethyltransferase 4 [Momordica charantia]	[more]
XP_022959093.1	1.7e-270	96.18	serine hydroxymethyltransferase 4-like [Cucurbita moschata] >KAG6574849.1 Serine...	[more]
XP_023006191.1	2.3e-270	95.97	serine hydroxymethyltransferase 4-like [Cucurbita maxima]	[more]
XP_038875387.1	3.9e-270	95.97	serine hydroxymethyltransferase 4 [Benincasa hispida]	[more]

BLAST of Sed0006300.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23254	9.3e-259	90.87	Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=SHM4 PE=1 S...	[more]
Q9SVM4	3.9e-233	81.20	Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=SHM5 PE=3 S...	[more]
Q84WV0	1.2e-178	62.66	Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=SHM7 PE=2 S...	[more]
Q9LM59	5.2e-177	63.09	Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=SHM6 PE=2 S...	[more]
Q54Z26	1.1e-174	65.42	Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=shmt1 ...	[more]

BLAST of Sed0006300.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKC8	3.8e-271	96.18	Serine hydroxymethyltransferase OS=Cucumis sativus OX=3659 GN=Csa_2G145880 PE=3 ...	[more]
A0A6J1CDF6	6.4e-271	96.18	Serine hydroxymethyltransferase OS=Momordica charantia OX=3673 GN=LOC111009716 P...	[more]
A0A6J1H4Y7	8.4e-271	96.18	Serine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111460192 PE...	[more]
A0A6J1KX34	1.1e-270	95.97	Serine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111499000 PE=3...	[more]
A0A5A7SVK0	5.4e-270	95.97	Serine hydroxymethyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Sed0006300.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13930.1	6.6e-260	90.87	serine hydroxymethyltransferase 4	[more]
AT4G13890.1	2.8e-234	81.20	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein	[more]
AT1G36370.1	8.8e-180	62.66	serine hydroxymethyltransferase 7	[more]
AT1G22020.1	3.7e-178	63.09	serine hydroxymethyltransferase 6	[more]
AT4G37930.1	3.8e-159	59.19	serine transhydroxymethyltransferase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 462..471
None	No IPR available	PANTHER	PTHR11680:SF33	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..470
IPR001085	Serine hydroxymethyltransferase	PIRSF	PIRSF000412	SHMT	coord: 1..466 e-value: 1.3E-185 score: 614.9
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..470
IPR001085	Serine hydroxymethyltransferase	HAMAP	MF_00051	SHMT	coord: 11..461 score: 42.457939
IPR001085	Serine hydroxymethyltransferase	CDD	cd00378	SHMT	coord: 13..416 e-value: 0.0 score: 609.588
IPR015422	Pyridoxal phosphate-dependent transferase, small domain	GENE3D	3.90.1150.10	Aspartate Aminotransferase, domain 1	coord: 16..460 e-value: 4.0E-213 score: 709.6
IPR039429	Serine hydroxymethyltransferase-like domain	PFAM	PF00464	SHMT	coord: 12..411 e-value: 6.6E-191 score: 634.1
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 41..316 e-value: 4.0E-213 score: 709.6
IPR019798	Serine hydroxymethyltransferase, pyridoxal phosphate binding site	PROSITE	PS00096	SHMT	coord: 236..252
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 6..463

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0006300	Sed0006300	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006300.1-three_prime_utr	Sed0006300.1-three_prime_utr-LG09:1397467..1397736	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006300.1-exon	Sed0006300.1-exon-LG09:1397467..1397981	exon
Sed0006300.1-exon	Sed0006300.1-exon-LG09:1398067..1398168	exon
Sed0006300.1-exon	Sed0006300.1-exon-LG09:1398249..1398639	exon
Sed0006300.1-exon	Sed0006300.1-exon-LG09:1399936..1400710	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006300.1-cds	Sed0006300.1-cds-LG09:1397737..1397981	CDS
Sed0006300.1-cds	Sed0006300.1-cds-LG09:1398067..1398168	CDS
Sed0006300.1-cds	Sed0006300.1-cds-LG09:1398249..1398639	CDS
Sed0006300.1-cds	Sed0006300.1-cds-LG09:1399936..1400613	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0006300.1-five_prime_utr	Sed0006300.1-five_prime_utr-LG09:1400614..1400710	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0006300.1	Sed0006300.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019264	glycine biosynthetic process from serine
biological_process	GO:0035999	tetrahydrofolate interconversion
biological_process	GO:0046655	folic acid metabolic process
biological_process	GO:0006565	L-serine catabolic process
biological_process	GO:0032259	methylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0070905	serine binding
molecular_function	GO:0008270	zinc ion binding