Sed0006006.1 (mRNA) Chayote v1

Overview
NameSed0006006.1
TypemRNA
OrganismSechium edule (Chayote v1)
Descriptioncyclin-B1-2-like
LocationLG03: 1857908 .. 1860776 (-)
Sequence length734
RNA-Seq ExpressionSed0006006.1
SyntenySed0006006.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTTTATATAAATACCAAATCGCAGTTCGCAGGGGCACATATCTTCACGCTCGCGACTTGCAGAGGAAGTTTTCTTGAAGAAGAAGAAAAATGGAGTCATCGAAGACAATCGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGCCTCCATGGCGTCAAGAGCGACCTCCTCGGATCTCACCCCGTCGAATCCATCTACGAATCTGTAATCTTTCGCTCTTTGTCGCCGTTTTATTCATTCTGGAAAAAAGTGAAATGGAAGTAAATTTCTTCTATCTAAGTTTCCCTATTTGATTTCTGTTCGGGTTATCTGTAATTAGGGTTTGTTATTAGGGGATAGAATCTAGGGTGGAGGTAGTTGATGAACAACCCTTTGCTCTAGTTGCTCGTATTAGGAACTTGTTTCTTGAGATTAGCATTGATTCATCTTTAATGTCTGATCTTGAGATTCATATCTGACTCTTCATGCTGAAATGTGGGTCACATAGTTTTTTTTTTTCTCTGAAACAAGGGTAGCCACGCCTGTCCCTAGGCCACGCACCAGGAGACATCGAAAGAATAATGTCACAGCTGAATCTCGAACCTGGAACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAACGATTGTGCCACCACTTGGGGACGCATCACATAGTGATTTATGAGTTTAGGGCACTGACGTGAATAGCCTAGGATCTGTTCTCAATTTTCTATTTGGATGGCTTTCCTCTTTTTCTTTTCTTTTTTTTTTCTCTCTTCATTTGCTAATAGATTTGTTTATACTAGAATATATTCCTTATGGCAGCACCAGAGAACATTAGTTTGCACTCAGAACAGTTATATATATGGGATTAACACAAATGTTTTCTAATCATCCGAGACATTGAATTTGGTTTAGTTGCATAATAACCGTGAGACATCTATGAAGATTGGTGTAAAAAGGTTAACTAGTTTGTGAGAACAATTTATTTCCTTTTGATGAATGTATATACTGGTTTTCTCGATTTAGACAAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGGTCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGGTATGGTTAATTTCCTTTCTTTTCATTCTTGCTGGATTCTGTATTTGCAACTTATTTATAATTGTAGTCAATAATCACTTCGTTAATTGTTGTTTTATAGTATGATCTAGTGGAGAGGAAAAGGCCACACTTCACTCCACTGACTCTTCTGCCTCATGTGATTTGCCTTAATAACTCATAAGCATGTTAAATTTGTTCTTTCTAGCCCCAAGTATATGGCATGGCCTAAATAGATTTAACCCTTTTTTCTAAGATAGATAAATAGATTTAACTTTTTGAATTTTGATGCAGTGAAGGGATCTTTTTGTTCTTTTCTCCAATAGACCATTCTGTTGTAATCGTCACGAACACTGGAATGTGGTGGGAGCCCTTTTTCCCATCATTCCTTGATATGTTAGCGACATGAATATATAGGACGTCTCTAGTGAAATTGATGTATGATGTTTCATGAATTTCACTGGGATACCCTAATCTGACCTCTGCTTTTCTTTTCTTTTCTCCAACATGTTGACTTGTGATGCCAAGATAAGCTAATATATGCTGTTTGTGTGTAGTTGGAACTTGAAAATCATTGCTAATATAATTTCTACATAAATTCAATGCTTATGCAGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAAATGAGAATTTTTTTAGTCACCTTGATCCAAATAACACATCTGATTCTTCTGTTCACTGCATTCTTTTGCATCATTGATGAGAGCTTTCAAATTTCAATAACCTTAAACAGTTCTTTTAATCTTAAGAACGTGTTTTTTTACTCTTATCAAATTATCTGGCATTGGTGGGATAATTAAATATAAGGATCACCTTAAAATCCCTTGTTTTTTTTTTGTTTTCCGGATTGAAAGTTTGGGCTGGGCGTGGAGCAAAGCTCCAATTTCCAGCTATATATATTAGGATCTTATTCCTCAGATTTAAGCATTCCTCGTCCTTAAAGGGTGGTGCGGTGGTTGAAAGTTTGAGATTTGAAGGCGTGTTCTCTCAAAGTTTCAGGCCACTTATAATATTAATTTGTAGACACCTCCTGTGTCTTCATTCCTTCAATGTCTCTCGGTGCTCGGCTTAGGGGCAGGCATGTTACTACTTGGAGCAAAGTTTCAATTTTTTTTTTCAAAAAAGAAAAGGTTTAAGCATTCATCCTCAAATGCTACTAGCATGAATTGCATTAATTCCCTATTTGATGAAGTTCGCAAGACATTCCACCGCTTCCATATTTCTCACTATAATGAATCTCGATTATCTAGTCTTGTCGTGTTTTCGCCATTATATTATAGATAATAGTCTCTGCTGGTGTTTACTTACAATTTATGTCAACGTCATTTGCAGACCCTAGGGAGTCTGAATCTTTGAGGCCGTTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAACCAAATGGGCACTACATCCAGAACACAGTCCATCTTACTCAACAATTTCATTATGGGGCCTTAGTTTCCCCATAATTTTACTGGCATCTCTGTTTGTTTGCTGGTTGGGACATGTTGCTTCTTATGAGTTGAACTTTTAGCTTCATAGTTCTGTGATAGGTTTGTTATCTGAACTTTGTTTGATTTCTTCTAAATATCGAACTCTATCTTTCTTTA

mRNA sequence

TGTTTTTATATAAATACCAAATCGCAGTTCGCAGGGGCACATATCTTCACGCTCGCGACTTGCAGAGGAAGTTTTCTTGAAGAAGAAGAAAAATGGAGTCATCGAAGACAATCGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGCCTCCATGGCGTCAAGAGCGACCTCCTCGGATCTCACCCCGTCGAATCCATCTACGAATCTACAAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGGTCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCTAGGGAGTCTGAATCTTTGAGGCCGTTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAACCAAATGGGCACTACATCCAGAACACAGTCCATCTTACTCAACAATTTCATTATGGGGCCTTAGTTTCCCCATAATTTTACTGGCATCTCTGTTTGTTTGCTGGTTGGGACATGTTGCTTCTTATGAGTTGAACTTTTAGCTTCATAGTTCTGTGATAGGTTTGTTATCTGAACTTTGTTTGATTTCTTCTAAATATCGAACTCTATCTTTCTTTA

Coding sequence (CDS)

ATGGAGTCATCGAAGACAATCGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGCCTCCATGGCGTCAAGAGCGACCTCCTCGGATCTCACCCCGTCGAATCCATCTACGAATCTACAAGGAGAACAGAAGAGGAGATGAAAAGGAAAATTCTTGTGAATACATATGGGTCTGCTTTTCCACTGAAGATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGCTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCTAGGGAGTCTGAATCTTTGAGGCCGTTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTTTCCAAAGGACCTGTTTGCCCAAGTTTCATGTAA

Protein sequence

MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM
Homology
BLAST of Sed0006006.1 vs. NCBI nr
Match: XP_022989933.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YESTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. NCBI nr
Match: KAG7033243.1 (Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.6 bits (727), Expect = 4.5e-73
Identity = 137/141 (97.16%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. NCBI nr
Match: XP_022956483.1 (cyclin-B1-2-like [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 136/141 (96.45%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. NCBI nr
Match: XP_023541108.1 (cyclin-B1-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTG LDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGGLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. NCBI nr
Match: XP_038889455.1 (cyclin-B1-2-like [Benincasa hispida])

HSP 1 Score: 280.8 bits (717), Expect = 6.5e-72
Identity = 135/141 (95.74%), Postives = 138/141 (97.87%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. ExPASy Swiss-Prot
Match: Q0DWQ7 (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-24
Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLH-GVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTY 60
           M S   +  EIGG  +D +RFG++  VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ DLD QILS+FQRPPG +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

BLAST of Sed0006006.1 vs. ExPASy Swiss-Prot
Match: Q55G18 (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 33  SHPVESIYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGPIPSSMLGLE 92
           SHPVESI     +TE ++K   + N +G+   +  ++++QI S+F+R P  + SSM+GLE
Sbjct: 25  SHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP-TLQSSMVGLE 84

Query: 93  ALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
            + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 85  TILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

BLAST of Sed0006006.1 vs. ExPASy Swiss-Prot
Match: Q3SZV5 (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 0

Query: 16  NDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++LL SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

BLAST of Sed0006006.1 vs. ExPASy Swiss-Prot
Match: Q9Y244 (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 16  NDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++LL SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

BLAST of Sed0006006.1 vs. ExPASy Swiss-Prot
Match: Q9CQT5 (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 16  NDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++LL SHP+E   ++ +  +++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

BLAST of Sed0006006.1 vs. ExPASy TrEMBL
Match: A0A6J1JRS1 (cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 9.8e-74
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YESTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. ExPASy TrEMBL
Match: A0A6J1GWZ3 (cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.3e-73
Identity = 136/141 (96.45%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. ExPASy TrEMBL
Match: A0A6J1BZ23 (cyclin-B1-2-like OS=Momordica charantia OX=3673 GN=LOC111006772 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.1e-72
Identity = 135/141 (95.74%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. ExPASy TrEMBL
Match: A0A0A0KUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.2e-72
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. ExPASy TrEMBL
Match: A0A5D3BR37 (Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 133/141 (94.33%), Postives = 138/141 (97.87%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           M+SSK I HEIGGIQNDALRFGL GVKSDL+GSHPVES+YE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

BLAST of Sed0006006.1 vs. TAIR 10
Match: AT5G38650.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-64
Identity = 110/141 (78.01%), Postives = 129/141 (91.49%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGLHGVKSD+L SHP+E+ YES ++++EEMKR+++ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

BLAST of Sed0006006.1 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-64
Identity = 110/141 (78.01%), Postives = 129/141 (91.49%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGLHGVKSD+L SHP+E+ YES ++++EEMKR+++ +TYG
Sbjct: 291 MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 350

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 351 AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 410

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 411 FHHGMEVRLGLSKGPASPSFM 431

BLAST of Sed0006006.1 vs. TAIR 10
Match: AT1G67250.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 234.6 bits (597), Expect = 5.0e-62
Identity = 103/141 (73.05%), Postives = 127/141 (90.07%), Query Frame = 0

Query: 1   MESSKTIAHEIGGIQNDALRFGLHGVKSDLLGSHPVESIYESTRRTEEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGLHGVKS+++GSHP+ES YES ++++E +KR ++ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD+DRQILSRFQRPPGPIPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLG+SKGP+ PSFM
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

BLAST of Sed0006006.1 vs. TAIR 10
Match: AT1G62920.1 (CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10
Identity = 34/71 (47.89%), Postives = 37/71 (52.11%), Query Frame = 0

Query: 62  AFPLKMDLDRQILSRF------------------------QRPPGPIPSSMLGLEALTGS 109
           A PLKMDLDR IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022989933.12.0e-7397.87cyclin-B1-2-like [Cucurbita maxima][more]
KAG7033243.14.5e-7397.16Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022956483.11.3e-7296.45cyclin-B1-2-like [Cucurbita moschata][more]
XP_023541108.11.3e-7296.45cyclin-B1-2-like [Cucurbita pepo subsp. pepo][more]
XP_038889455.16.5e-7295.74cyclin-B1-2-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q0DWQ74.0e-2453.04Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1[more]
Q55G181.4e-1342.00Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po... [more]
Q3SZV51.6e-1237.93Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1[more]
Q9Y2441.0e-1137.07Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1[more]
Q9CQT51.0e-1137.07Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1JRS19.8e-7497.87cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1[more]
A0A6J1GWZ36.3e-7396.45cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1[more]
A0A6J1BZ234.1e-7295.74cyclin-B1-2-like OS=Momordica charantia OX=3673 GN=LOC111006772 PE=4 SV=1[more]
A0A0A0KUK69.2e-7294.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1[more]
A0A5D3BR371.6e-7194.33Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 P... [more]
Match NameE-valueIdentityDescription
AT5G38650.14.1e-6478.01Proteasome maturation factor UMP1 [more]
AT5G38660.24.1e-6478.01acclimation of photosynthesis to environment [more]
AT1G67250.15.0e-6273.05Proteasome maturation factor UMP1 [more]
AT1G62920.19.8e-1047.89CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR00801... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008012Proteasome maturation factor Ump1PFAMPF05348UMP1coord: 15..129
e-value: 1.4E-34
score: 118.7
IPR008012Proteasome maturation factor Ump1PANTHERPTHR12828PROTEASOME MATURATION PROTEIN UMP1coord: 1..141
NoneNo IPR availablePANTHERPTHR12828:SF8BNAA07G25120D PROTEINcoord: 1..141

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0006006Sed0006006gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0006006.1-exonSed0006006.1-exon-LG03:1857908..1858224exon
Sed0006006.1-exonSed0006006.1-exon-LG03:1858939..1859036exon
Sed0006006.1-exonSed0006006.1-exon-LG03:1859648..1859748exon
Sed0006006.1-exonSed0006006.1-exon-LG03:1860559..1860776exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0006006.1-three_prime_utrSed0006006.1-three_prime_utr-LG03:1857908..1858123three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0006006.1-cdsSed0006006.1-cds-LG03:1858124..1858224CDS
Sed0006006.1-cdsSed0006006.1-cds-LG03:1858939..1859036CDS
Sed0006006.1-cdsSed0006006.1-cds-LG03:1859648..1859748CDS
Sed0006006.1-cdsSed0006006.1-cds-LG03:1860559..1860684CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0006006.1-five_prime_utrSed0006006.1-five_prime_utr-LG03:1860685..1860776five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0006006.1Sed0006006.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0000502 proteasome complex