Sed0005888.2 (mRNA) Chayote v1

Overview


Name	Sed0005888.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG05: 31035436 .. 31039424 (-)
Sequence length	1095
RNA-Seq Expression	Sed0005888.2
Synteny	Sed0005888.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTATCCTAATTCACAATATATATTTATCGCTCCTTCCATTTCTTTTGATTATTCCCCTTTTCTTCCTCCATTTTCCCCTTCTTTTTTGTCTCTGATGGTGAACGACGGCTGGATTACGGCCGCCATGGCCGACGACGGAGTGGTGGTCGAGTTCTTGCTGCGTTTGAACCAGTCGCAGCCTCAGGTGTCGCCTTCCAAATCTCCGTTCCCGGCGACGACGCCGAACCCGTTTTCCTGGGGGATTCGGCAGCCGAGGTCCAGGACGGCCGTCGCGGTTGGTGTTTTGGTCAGAGACGACGATAAGGATGTTGACTCCACCAGGTGTAGTCCGACGACGCCGCTTTCGTGGAGCGGCGGTGCTTCTCCTTCTCCTACGCTTGACGGTTGTGAGGAGTCCAGCCGTCCTGATCCAGCTTCCGGATGCAAGGTTCTTCACTCTCTCTCCGTTATCTCACGATTTCGTTTCTTCTCTTTTGGATTTTTCTACTTTTGGATCTTTATATCTCCACTGTGCGTGTGCTCTGGTTTCATTTCTCGGTATTTTCGGTTCTTGTGAGTTTTTTGAATCTTGCGCCGGCGTTGTTGATTGCGGTTTTTCCTTGGCGGTGGTGGCGTCGGCTGTGAAGCTCAGGCGGCCGGTGGCGGCGTGGATTCTCCGGTGAAACATTCTTATTGTATTGTTACTGTTTCGTTGTTTGTTTTTACAAGAATCTGATTCTGTATCGTGAAATCTCTCCCGATTTCCTCCTCATTTCTCGCTCAGAGCTCACGTAATTGCGAATCTCTCAACTCCATAACCGCTCTGATATTTCACCGAACAGTAACCGTTTCGAGTTCTCTCCATCAATGGCGGACAGTCCTCGCCAATCACCGCCGAGAAACTGCTCTTTCGTTCGACAAATCTCTTCGCGTTTTCTTCAAATTGACCAAAACGCCCTTCTAATCCCTCGCTAGATTCCAAAGCCTTTCCGAATCGAACACCGGCCCGCAATTTCAAATCTCTGCCATCGCCGACGGTTCATCTATGTGAAAACCATTGAAAGCTCCAAGAAACTTCCCTACGGCCATGGTTCTTTCTCTTTCCTTTCCATGTTTGACCGTATTGCCACTGGAAGTGTAAACGATTCATCCCAAATCGCGAGGGTATTCTCGTCACATGCACGAATTCCGAGCCGGTTCGATTGAACCGGCATCGGACGGTGGATAATACAGCGAAAGTGAGGGCCCGAATCAGGTAAAGAGGAGAGGCGTTCGCAAGAGATAGGTCTGCGTTAGGTTTGATGCAGACTTGGGAGTAATGATCAGGTGTGGCGTGGGGCACGATTGGTTCCTGTGCTCGCTTTCTAAAATTGGGAATTGTTGTTTGAGTTTGTTGGGCTATGAACGGATGGGAAGAGGAAGAAAGAAGATCCACGTGACCGAGTCACTCGAGGTGGGAAATCAAAGCTCAGGATGGTGTGTGGGTCTGGATCGTGTGGTCGTAATCTTCAAGTGACCACGTGGAATTCTTGATGTGATGTGCGATTCTAATCCATTTGAAATTGGGTAATTTTTTGGGATTGTTACTGTTTCATCTATTTCCTTTACTTACGTTTTATTAACGTGTTTGATGGTGGGAGACTTCAACTTAAATTCTCTCGGTCGATGATACATGTCAATTATTTTTATTTTTTTTGTTCCTTATTACTCTTTATATATTTATATATTCACGATTGTTTGAATTGACTTATGTATACCTCAATTGTTTTCATGTAATAATTGTTTGATCTGATCAACGCATAGTGGTATAAGGAAATCTGCAAAAAATTATTTTTTATGAATTAAATTTTTATAACCTCTCAATTCTGTAAGAATCTTTAGACTAGTGACCACTAAACTAACTCGTGATGGTATGAACTATTATCATTGTAAACTGTGTTTGGAGTTGATTAGAAGCTATTTGATTATTGTTTGCAGTTTTGATTTGGACTTTATGTTATTTGTTTTGTGATTTGATTCTAAATAATGTGTTTGAAGCTTTATACTTGCTAGTTTTTTTTTTTTTTTTTTTTGTGATTTCAAATTTTATGTTAATTGTTTTGTAATATTGATGATGGGTTTGGATTTGGTTTTTTCAGGGTGCTGCTACAAAAAGGTCAAGACGAAAGAAGGTAATACAATGTTTTTTTTGGGAAGATAAATTGTGGATTTGTTGGGGTTTGCCGTATCTGCCAAGCATTTATTTTATTGCTGGCTTTTAAATGAGTTGTTGTTGGCTGGCATTGTTCTTGAAGAATGAATGGTTGGTTCAACCACCAATTGTATTTCTTAGAGAGGTAACGAAGCTTATAATTTTACTTTTATTTAATGACTTATTCTCTTGTTGTTTGTTTTCCAGACTTTTGCTGAACTTAAGGAAGAGGAGAGCAAGCTTTTGACGGAGAAAATTAACCTAAAAAAGGTATAATTTTAATATTGTTTTTATCGGGCGTGAGCTATATTTTTATCTAACTTTATATATATAATTCTTTCATTCTAGAAATAGAAGTGGGAATAGTTTCAAATTTAGTTTTTTTTTAAGGAAACTTCACTAAACCAAACAAGCTAAATCCACTCTTCCAAAATAGAGAAGCCCAAACCGAGGGACTAGATTGTTCCCACCAAAAAAGTAAGCCCCCTTCCTCAAATTGACGAGGATTGACCCACTATAACGAGTCCATCTCAACAATAGAATAAAGACATAGCTAAAAGAATGGAAGAAAATCTAAAATATCACCGAAGCTTTTCTAAGGGGACGAGAGGGGTGGCCTCGTCCAAGCCTCTAAGGTATGCTATCTTGGAGGTCCTAAACTCAAAATTCATGAGTGAGTTTAATTATAAAATTTCTTGTTGTCATCCAAGTTTGGACATTGGGACGAGCGCGAGTGCTCCGGGTATGTAGTGAATCGACAATGTTGGACTTTGGGACGAGCGCGAGTGCTCCGGTTATCATAAAAAAGAAACTGAAATAGCATCGACGATGTTGCCTTTTCTTTCTTGGTCGCACCATTCTTTGTTTTTGATGACCTGACTTACTTTTTGAACAGGAGCTGGTCACTGCACGAGCAATCTTCGAAGAACATAGAGCCAAAAATGAGAGTTTGAAGAAAATGAAGGTAATCCTGGCTTTATGCCATGTGACTTTAGTTCATACTTTGAAAATTTTCAAAAGGATAGATAGAAGGGTTTCAAAGATATTTAGTTAAACAACATTTGGAGCTACTAGTCTATACTTTATGCTAGTTGAACGAACTATCCTCGTGTTTACGGGTTTCAAAGGTATTGACGTTTCACATCAAAGATTCTCTCTAAAGCGCAAACTTATCGATCTGAACACGCCAAAAGAATCTCTCTGATAAAAAAAAATATCTATTACTTTCTGCAGATGGATTTCAACTTGAAGCACACAGAGACATTCAGTACAAACTCCAATAAGATGCTGACAGAAGAATCTTCATCCACACTAACCCATCAAAAGGAAAGCTCTAACATAGAAACAATTCCCCCAACAACATTCCCATTCACAACAGGATCAGGTTCTTCCGAGGTGCAATCGCAGAAGAAGAGCAAATCGACCGAAGAAGATTGCGTGTTTTTCTTACCAGATTTAAATATGACACCTTCAGAAGAGTGACACCAAGGTGAACATAAATTGATTCCCTCTATTTCTCTCTAATATGCCATGAAGGATTATATGGAGATTAAAGCTGGCTGGTTGTCACAGGTGGTAAGGTCATTAACCTTATGACTCTACAATTTGGTGATGGCAAAAAAGTTTGCTATCTTGTAGAAAGCCCAAGCAGACTGTGTTATAATATTGGTTTAGCATTTTATTGATTCCTATGTTCTACAATATTGTTTAGGTCAAACCAAATGTTGAATTGAATCCCTTTAGAATGGTGTAAGTTTGATTCATTATAGGTACATAGCCAATGAAAACTTTGTTATAAAAGTTTTTCTTTTTGTGCA

mRNA sequence

CTCTATCCTAATTCACAATATATATTTATCGCTCCTTCCATTTCTTTTGATTATTCCCCTTTTCTTCCTCCATTTTCCCCTTCTTTTTTGTCTCTGATGGTGAACGACGGCTGGATTACGGCCGCCATGGCCGACGACGGAGTGGTGGTCGAGTTCTTGCTGCGTTTGAACCAGTCGCAGCCTCAGGTGTCGCCTTCCAAATCTCCGTTCCCGGCGACGACGCCGAACCCGTTTTCCTGGGGGATTCGGCAGCCGAGGTCCAGGACGGCCGTCGCGGTTGGTGTTTTGGTCAGAGACGACGATAAGGATGTTGACTCCACCAGGTGTAGTCCGACGACGCCGCTTTCGTGGAGCGGCGGTGCTTCTCCTTCTCCTACGCTTGACGGTTGTGAGGAGTCCAGCCGTCCTGATCCAGCTTCCGGATGCAAGGGTGCTGCTACAAAAAGGTCAAGACGAAAGAAGACTTTTGCTGAACTTAAGGAAGAGGAGAGCAAGCTTTTGACGGAGAAAATTAACCTAAAAAAGGAGCTGGTCACTGCACGAGCAATCTTCGAAGAACATAGAGCCAAAAATGAGAGTTTGAAGAAAATGAAGATGGATTTCAACTTGAAGCACACAGAGACATTCAGTACAAACTCCAATAAGATGCTGACAGAAGAATCTTCATCCACACTAACCCATCAAAAGGAAAGCTCTAACATAGAAACAATTCCCCCAACAACATTCCCATTCACAACAGGATCAGGTTCTTCCGAGGTGCAATCGCAGAAGAAGAGCAAATCGACCGAAGAAGATTGCGTGTTTTTCTTACCAGATTTAAATATGACACCTTCAGAAGAGTGACACCAAGGTGGTAAGGTCATTAACCTTATGACTCTACAATTTGGTGATGGCAAAAAAGTTTGCTATCTTGTAGAAAGCCCAAGCAGACTGTGTTATAATATTGGTTTAGCATTTTATTGATTCCTATGTTCTACAATATTGTTTAGGTCAAACCAAATGTTGAATTGAATCCCTTTAGAATGGTGTAAGTTTGATTCATTATAGGTACATAGCCAATGAAAACTTTGTTATAAAAGTTTTTCTTTTTGTGCA

Coding sequence (CDS)

ATGGTGAACGACGGCTGGATTACGGCCGCCATGGCCGACGACGGAGTGGTGGTCGAGTTCTTGCTGCGTTTGAACCAGTCGCAGCCTCAGGTGTCGCCTTCCAAATCTCCGTTCCCGGCGACGACGCCGAACCCGTTTTCCTGGGGGATTCGGCAGCCGAGGTCCAGGACGGCCGTCGCGGTTGGTGTTTTGGTCAGAGACGACGATAAGGATGTTGACTCCACCAGGTGTAGTCCGACGACGCCGCTTTCGTGGAGCGGCGGTGCTTCTCCTTCTCCTACGCTTGACGGTTGTGAGGAGTCCAGCCGTCCTGATCCAGCTTCCGGATGCAAGGGTGCTGCTACAAAAAGGTCAAGACGAAAGAAGACTTTTGCTGAACTTAAGGAAGAGGAGAGCAAGCTTTTGACGGAGAAAATTAACCTAAAAAAGGAGCTGGTCACTGCACGAGCAATCTTCGAAGAACATAGAGCCAAAAATGAGAGTTTGAAGAAAATGAAGATGGATTTCAACTTGAAGCACACAGAGACATTCAGTACAAACTCCAATAAGATGCTGACAGAAGAATCTTCATCCACACTAACCCATCAAAAGGAAAGCTCTAACATAGAAACAATTCCCCCAACAACATTCCCATTCACAACAGGATCAGGTTCTTCCGAGGTGCAATCGCAGAAGAAGAGCAAATCGACCGAAGAAGATTGCGTGTTTTTCTTACCAGATTTAAATATGACACCTTCAGAAGAGTGA

Protein sequence

MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVAVGVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRPDPASGCKGAATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESLKKMKMDFNLKHTETFSTNSNKMLTEESSSTLTHQKESSNIETIPPTTFPFTTGSGSSEVQSQKKSKSTEEDCVFFLPDLNMTPSEE

Homology

[Close]

BLAST of Sed0005888.2 vs. NCBI nr
Match: XP_023523262.1 (uncharacterized protein LOC111787510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.1 bits (780), Expect = 5.7e-79
Identity = 189/271 (69.74%), Postives = 204/271 (75.28%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P T   PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVTV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRP----DPASGCK 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP      AS  K
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFK 121

Query: 121 GA---------ATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 180
           GA         ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKNESL
Sbjct: 122 GAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESL 181

Query: 181 KKMKMDFNLKHTETFSTNSN---KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGS 240
           KKMK+DFN+K+ E F+TNS     M+ E+SSSTLTHQ+ESSNIE IPPT  P T  GSG 
Sbjct: 182 KKMKVDFNMKYAEKFNTNSKMMMMMMQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGR 241

Query: 241 SEVQSQKKSK-STEEDCVFFLPDLNMTPSEE 249
            E QSQ KSK STE+DCVFFLPDLNMTPSE+
Sbjct: 242 FEAQSQTKSKSSTEDDCVFFLPDLNMTPSED 268

[Close]

BLAST of Sed0005888.2 vs. NCBI nr
Match: XP_022940407.1 (uncharacterized protein LOC111446021 [Cucurbita moschata])

HSP 1 Score: 302.8 bits (774), Expect = 2.8e-78
Identity = 187/269 (69.52%), Postives = 203/269 (75.46%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P     PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVMV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRP----DPASGCK 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP      AS  K
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFK 121

Query: 121 GA---------ATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 180
           GA         ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKNESL
Sbjct: 122 GAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESL 181

Query: 181 KKMKMDFNLKHTETFSTNSN-KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSSE 240
           KKMK+DFN+K+ E F+TNS   M+ E+SSSTLTHQ+ESSNIE IPPT  P T  GSG  E
Sbjct: 182 KKMKVDFNMKYAEKFNTNSKMMMMQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFE 241

Query: 241 VQSQKKS-KSTEEDCVFFLPDLNMTPSEE 249
            +SQKKS  STE+DCVFFLPDLNMTPSE+
Sbjct: 242 AESQKKSNSSTEDDCVFFLPDLNMTPSED 266

[Close]

BLAST of Sed0005888.2 vs. NCBI nr
Match: XP_022981042.1 (uncharacterized protein LOC111480308 isoform X2 [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 3.7e-78
Identity = 186/269 (69.14%), Postives = 200/269 (74.35%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P T   PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVTV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRPDPASGC----- 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP   S       
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFK 121

Query: 121 --------KGAATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 180
                    G ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKN SL
Sbjct: 122 GAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLSL 181

Query: 181 KKMKMDFNLKHTETFSTNSN-KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSSE 240
           KKMK+D N+K+ E F+TNS   ML E+SSSTLTHQ+ESSNIE IPPT  P T  GSG  E
Sbjct: 182 KKMKVDLNMKYAEKFNTNSKMMMLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFE 241

Query: 241 VQSQKKSK-STEEDCVFFLPDLNMTPSEE 249
            QSQKKSK STE+DCVFFLPDLNMTPSE+
Sbjct: 242 AQSQKKSKSSTEDDCVFFLPDLNMTPSED 266

[Close]

BLAST of Sed0005888.2 vs. NCBI nr
Match: XP_022981041.1 (uncharacterized protein LOC111480308 isoform X1 [Cucurbita maxima])

HSP 1 Score: 302.0 bits (772), Expect = 4.8e-78
Identity = 186/270 (68.89%), Postives = 200/270 (74.07%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P T   PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVTV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRPDPASGC----- 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP   S       
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFK 121

Query: 121 ---------KGAATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNES 180
                     G ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKN S
Sbjct: 122 VGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLS 181

Query: 181 LKKMKMDFNLKHTETFSTNSN-KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSS 240
           LKKMK+D N+K+ E F+TNS   ML E+SSSTLTHQ+ESSNIE IPPT  P T  GSG  
Sbjct: 182 LKKMKVDLNMKYAEKFNTNSKMMMLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRF 241

Query: 241 EVQSQKKSK-STEEDCVFFLPDLNMTPSEE 249
           E QSQKKSK STE+DCVFFLPDLNMTPSE+
Sbjct: 242 EAQSQKKSKSSTEDDCVFFLPDLNMTPSED 267

[Close]

BLAST of Sed0005888.2 vs. NCBI nr
Match: KAG6608135.1 (hypothetical protein SDJN03_01477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.7 bits (761), Expect = 9.0e-77
Identity = 186/270 (68.89%), Postives = 201/270 (74.44%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P T   PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVTV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRP----DPASGCK 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP      AS  K
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFK 121

Query: 121 GA---------ATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 180
           GA         ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKNESL
Sbjct: 122 GAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESL 181

Query: 181 KKMKMDFNLKHTETFSTNSN--KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSS 240
           KKMK+DFN+K+ E F+TNS    M+ E+SSSTLT Q+ESSNIE IPPT  P T  GSG  
Sbjct: 182 KKMKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRF 241

Query: 241 EVQSQKKSK-STEEDCVFFLPDLNMTPSEE 249
           E Q Q K K STE+DCVFFLPDLNMTPSE+
Sbjct: 242 EAQLQTKIKSSTEDDCVFFLPDLNMTPSED 267

[Close]

BLAST of Sed0005888.2 vs. ExPASy TrEMBL
Match: A0A6J1FJI3 (uncharacterized protein LOC111446021 OS=Cucurbita moschata OX=3662 GN=LOC111446021 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.4e-78
Identity = 187/269 (69.52%), Postives = 203/269 (75.46%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P     PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVMV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRP----DPASGCK 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP      AS  K
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFK 121

Query: 121 GA---------ATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 180
           GA         ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKNESL
Sbjct: 122 GAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESL 181

Query: 181 KKMKMDFNLKHTETFSTNSN-KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSSE 240
           KKMK+DFN+K+ E F+TNS   M+ E+SSSTLTHQ+ESSNIE IPPT  P T  GSG  E
Sbjct: 182 KKMKVDFNMKYAEKFNTNSKMMMMQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFE 241

Query: 241 VQSQKKS-KSTEEDCVFFLPDLNMTPSEE 249
            +SQKKS  STE+DCVFFLPDLNMTPSE+
Sbjct: 242 AESQKKSNSSTEDDCVFFLPDLNMTPSED 266

[Close]

BLAST of Sed0005888.2 vs. ExPASy TrEMBL
Match: A0A6J1ISW2 (uncharacterized protein LOC111480308 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.8e-78
Identity = 186/269 (69.14%), Postives = 200/269 (74.35%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P T   PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVTV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRPDPASGC----- 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP   S       
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFK 121

Query: 121 --------KGAATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 180
                    G ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKN SL
Sbjct: 122 GAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLSL 181

Query: 181 KKMKMDFNLKHTETFSTNSN-KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSSE 240
           KKMK+D N+K+ E F+TNS   ML E+SSSTLTHQ+ESSNIE IPPT  P T  GSG  E
Sbjct: 182 KKMKVDLNMKYAEKFNTNSKMMMLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRFE 241

Query: 241 VQSQKKSK-STEEDCVFFLPDLNMTPSEE 249
            QSQKKSK STE+DCVFFLPDLNMTPSE+
Sbjct: 242 AQSQKKSKSSTEDDCVFFLPDLNMTPSED 266

[Close]

BLAST of Sed0005888.2 vs. ExPASy TrEMBL
Match: A0A6J1IVD4 (uncharacterized protein LOC111480308 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.3e-78
Identity = 186/270 (68.89%), Postives = 200/270 (74.07%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MVND W+TAAMADDGVVVE L+RL QSQ  VSPSKSP P T   PF+WGIRQ RSRTA  
Sbjct: 2   MVNDDWLTAAMADDGVVVELLVRLKQSQ-AVSPSKSPLPVTV--PFTWGIRQLRSRTATT 61

Query: 61  V-----GVLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRPDPASGC----- 120
           V     GVLVR ++KDVDSTR SPTTPLSWSGG SPS TLDG EESSRP   S       
Sbjct: 62  VGRCGDGVLVR-NNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAVSRFK 121

Query: 121 ---------KGAATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNES 180
                     G ATKR RRKKTFAELKEEES LL EKI+LKKEL   RA FEE RAKN S
Sbjct: 122 VGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNLS 181

Query: 181 LKKMKMDFNLKHTETFSTNSN-KMLTEESSSTLTHQKESSNIETIPPTTFPFT-TGSGSS 240
           LKKMK+D N+K+ E F+TNS   ML E+SSSTLTHQ+ESSNIE IPPT  P T  GSG  
Sbjct: 182 LKKMKVDLNMKYAEKFNTNSKMMMLQEDSSSTLTHQRESSNIEAIPPTLLPLTGAGSGRF 241

Query: 241 EVQSQKKSK-STEEDCVFFLPDLNMTPSEE 249
           E QSQKKSK STE+DCVFFLPDLNMTPSE+
Sbjct: 242 EAQSQKKSKSSTEDDCVFFLPDLNMTPSED 267

[Close]

BLAST of Sed0005888.2 vs. ExPASy TrEMBL
Match: A0A6J1IIT2 (uncharacterized protein LOC111476653 OS=Cucurbita maxima OX=3661 GN=LOC111476653 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.4e-75
Identity = 179/269 (66.54%), Postives = 201/269 (74.72%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MV D W+TAAMA+D VV + L+RL QSQ   SPSKSP P     PF+WG+RQPRSRTA A
Sbjct: 2   MVEDEWLTAAMAEDSVVADLLVRLKQSQ-AASPSKSPRPMKL--PFNWGVRQPRSRTAAA 61

Query: 61  VG--------VLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRP----DPAS 120
           +         V+++ ++KDVDSTRCSPTTPLSWSGGASPS TLDG E SSR       AS
Sbjct: 62  MAAVVVRCGDVVLQRNNKDVDSTRCSPTTPLSWSGGASPSATLDGYEASSRHATLLHVAS 121

Query: 121 GCKGA---------ATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKN 180
             KGA          TKR RRKKTFAELKEEE+ LL EK++LK EL T +A FEE R KN
Sbjct: 122 RFKGAVANESPACTTTKRLRRKKTFAELKEEENTLLKEKLHLKMELATLQASFEEQRTKN 181

Query: 181 ESLKKMKMDFNLKHTETFSTNSNKMLTEESSSTLTHQKESSNIETIPPTTFPFTTGSGSS 240
           ESLKKMK+DFNLK+ E F+TNSN M+ EESSSTLTHQ+ESSNIET PP T PF TGSGSS
Sbjct: 182 ESLKKMKVDFNLKYPEKFNTNSN-MMYEESSSTLTHQRESSNIETSPP-TLPF-TGSGSS 241

Query: 241 EVQSQKKSKSTEEDCVFFLPDLNMTPSEE 249
           E QSQKKSKSTEED VF LPDLNMTPSE+
Sbjct: 242 EAQSQKKSKSTEEDSVFLLPDLNMTPSED 264

[Close]

BLAST of Sed0005888.2 vs. ExPASy TrEMBL
Match: A0A6J1FA47 (uncharacterized protein LOC111443668 OS=Cucurbita moschata OX=3662 GN=LOC111443668 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.0e-73
Identity = 179/270 (66.30%), Postives = 200/270 (74.07%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           MV D W+TAAMA+D VV + L+RL QSQ   SPSKSP P     PF+WG+RQPRSRTA A
Sbjct: 2   MVEDEWLTAAMAEDSVVADLLVRLKQSQ-AASPSKSPRPMKL--PFNWGVRQPRSRTAAA 61

Query: 61  VG--------VLVRDDDKDVDSTRCSPTTPLSWSGGASPSPTLDGCEESSRP----DPAS 120
           +         V++  ++KDVDSTRCSPTTPLSWSGGASPS TLDG E SSR       AS
Sbjct: 62  MAAVVLRCGDVVLERNNKDVDSTRCSPTTPLSWSGGASPSATLDGYEASSRHATLLHVAS 121

Query: 121 GCKGA---------ATKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKN 180
             KGA          TKR RRKKTFAELKEEE+ LL EK++LK EL T +A FEE R+KN
Sbjct: 122 RFKGAVANESPAGTTTKRLRRKKTFAELKEEENTLLKEKLHLKMELATLQASFEEQRSKN 181

Query: 181 ESLKKMKMDFNLKHTETFSTNSNKMLTEESSSTLTHQKESS-NIETIPPTTFPFTTGSGS 240
           ESLKKMK+DFNLK+ E FSTNSN M+ EESSSTLTHQ+ESS NIET PP T PF TGSGS
Sbjct: 182 ESLKKMKVDFNLKYPEKFSTNSN-MMHEESSSTLTHQRESSNNIETSPP-TIPF-TGSGS 241

Query: 241 SEVQSQKKSKSTEEDCVFFLPDLNMTPSEE 249
           SE QSQKKSKSTEED VF LPDLNM PSE+
Sbjct: 242 SEAQSQKKSKSTEEDSVFLLPDLNMAPSED 265

[Close]

BLAST of Sed0005888.2 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.7e-28
Identity = 99/266 (37.22%), Postives = 137/266 (51.50%), Query Frame = 0


Query: 4   DGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTA---VA 63
           D W+  A+ DD +VVE LLRL  +   VS +    PA    P  WGIRQ RSR++     
Sbjct: 13  DDWVAVAITDDDLVVELLLRLKHAGTVVSDN----PAVILPPLRWGIRQRRSRSSRFGGG 72

Query: 64  VGVLVRDDDKDVDSTRCSPTTPLSWSGGA-----SPSPTLDGCEESSRPDPASGCKGAA- 123
            GVLV    KDVDS R SP TPLSWSGG+     S SP+ DG E++SR    S   G+  
Sbjct: 73  GGVLV-SLKKDVDSVRASPKTPLSWSGGSGSGGGSASPSADGFEDNSRQASCSTSTGSGS 132

Query: 124 ------------TKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 183
                       +KR +++K+  ELK EE+  L E+++L+KE+ + RA F+E   +N+ L
Sbjct: 133 KVFPTNEITSCFSKRLKKRKSSFELKNEENLKLKERLDLEKEIASLRATFDEQNLRNQKL 192

Query: 184 KKMKMDFNLKHTETFSTNSNKMLTEESSSTLTHQKESSNIETIPPTTFPFTTGSGSSEVQ 243
           K++K+D N                   S  +T++K    ++ I  +      GS     +
Sbjct: 193 KRIKLDLN-------------------SGRVTNKKP---VDLIRKSQLERLQGS-----K 246

Query: 244 SQKKSKSTEEDCVFFLPDLNMTPSEE 249
           S K S S  +   F LPDLNM PSEE
Sbjct: 253 SCKTSDSQNQGSFFVLPDLNMAPSEE 246

[Close]

BLAST of Sed0005888.2 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 5.7e-21
Identity = 86/220 (39.09%), Postives = 104/220 (47.27%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           M  + WI  AM+DD +V E LLRL  S+P+     SP          W +RQ RS     
Sbjct: 1   MSGENWIRVAMSDDSMVAEALLRLRHSEPKNRVDASPL------KLKWSVRQRRS----- 60

Query: 61  VGVLVRDDDKDVDSTRCSPTTPLSWSGGASPS------------PTLDGCEESS---RPD 120
                    K  D TR SPTTPLSWSG  S S             T++G EESS   +P 
Sbjct: 61  ---------KKGDQTRASPTTPLSWSGATSLSGGGGSGGSGAGATTMEGLEESSAAVKPS 120

Query: 121 PASGCKGAAT------------KRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFE 180
                K + T            KRSR+KKT AELKEEE  LL E   LK EL   R + E
Sbjct: 121 EPFRSKISQTSAITTTTTTTLFKRSRKKKTLAELKEEEIMLLKESNGLKNELANMRDLLE 180

Query: 181 EHRAKNESLKKMKMDFNLKHTETFSTNSNKMLTEESSSTL 194
           + RA+N +LKKMK        E+ S  S K+  E+ SS L
Sbjct: 181 QQRARNTALKKMK-------AESQSALSCKLTFEQGSSFL 193

[Close]

BLAST of Sed0005888.2 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 4.9e-20
Identity = 77/208 (37.02%), Postives = 107/208 (51.44%), Query Frame = 0


Query: 1   MVNDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVA 60
           M    WI  AM DD +V E L+ L  ++P +  +KS     +     W +RQPR++ A  
Sbjct: 1   MTGGDWIHEAMGDDSLVAEALICLLHAEPSLPETKS--GGASDLKLKWSVRQPRTKAA-- 60

Query: 61  VGVLVRDDDKDVDSTRCSPTTPLSWS-------GGASPSPTLDGCEESS---RPDPASGC 120
              L +  D D   TR SPTTPLSWS       GG   +  +DG EESS   +   A   
Sbjct: 61  --TLRKKGDHD---TRASPTTPLSWSGATSFSGGGGGAAAAVDGFEESSGVVKLSEAVRS 120

Query: 121 KGAAT-------KRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESLK 180
           K   T       KRSR+KKT A+LKEEES LL E+  L+ EL T + + ++ RA+NESLK
Sbjct: 121 KITQTSVTTSPFKRSRKKKTLAQLKEEESVLLKERNGLRNELATMQDLLKQQRARNESLK 180

Query: 181 KMKMDFNLKHTETFSTNSNKMLTEESSS 192
           K++ +       +F      +  + +SS
Sbjct: 181 KLQAESQKNDDSSFLLPDLNIALDNNSS 199

[Close]

BLAST of Sed0005888.2 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-17
Identity = 76/201 (37.81%), Postives = 101/201 (50.25%), Query Frame = 0


Query: 4   DGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTA---VA 63
           D W+  A+ DD +VVE LLRL  +   VS +    PA    P  WGIRQ RSR++     
Sbjct: 13  DDWVAVAITDDDLVVELLLRLKHAGTVVSDN----PAVILPPLRWGIRQRRSRSSRFGGG 72

Query: 64  VGVLVRDDDKDVDSTRCSPTTPLSWSGGA-----SPSPTLDGCEESSRPDPASGCKGAA- 123
            GVLV    KDVDS R SP TPLSWSGG+     S SP+ DG E++SR    S   G+  
Sbjct: 73  GGVLV-SLKKDVDSVRASPKTPLSWSGGSGSGGGSASPSADGFEDNSRQASCSTSTGSGS 132

Query: 124 ------------TKRSRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESL 183
                       +KR +++K+  ELK EE+  L E+++L+K      ++F  H       
Sbjct: 133 KVFPTNEITSCFSKRLKKRKSSFELKNEENLKLKERLDLEKVDFRCYSLFYYH------- 192

[Close]

BLAST of Sed0005888.2 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 6.0e-10
Identity = 57/192 (29.69%), Postives = 82/192 (42.71%), Query Frame = 0


Query: 3   NDGWITAAMADDGVVVEFLLRLNQSQPQVSPSKSPFPATTPNPFSWGIRQPRSRTAVAVG 62
           +D W   AM D  VV E L++L +++   +P              WGI+QPRSR      
Sbjct: 4   SDDWTKCAMRDGEVVAELLVKLKEAKVIKNP--------IVTALRWGIQQPRSRC----- 63

Query: 63  VLVRDDDKDVDSTRCSPTTPLSWSGG-----ASPSPTLDGCEESSRPDPASGCKGAATKR 122
                  +    +RCSP+TPLSWSGG     +SPS  +DG E +SR   A G +      
Sbjct: 64  ------PRKESESRCSPSTPLSWSGGCGGSSSSPSGYVDGYEATSRQISAVGSR------ 123

Query: 123 SRRKKTFAELKEEESKLLTEKINLKKELVTARAIFEEHRAKNESLKKMKMDF--NLKHTE 182
                                    K + + R+ F E   +N +LK+MKM+   NL   E
Sbjct: 124 ------------------------SKNISSLRSPFSERGIENNNLKRMKMNHIQNLAKDE 146

Query: 183 TFSTNSNKMLTE 188
              T+ N +L +
Sbjct: 184 NCKTDGNFLLPD 146

The following BLAST results are available for this feature:

BLAST of Sed0005888.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523262.1	5.7e-79	69.74	uncharacterized protein LOC111787510 [Cucurbita pepo subsp. pepo]	[more]
XP_022940407.1	2.8e-78	69.52	uncharacterized protein LOC111446021 [Cucurbita moschata]	[more]
XP_022981042.1	3.7e-78	69.14	uncharacterized protein LOC111480308 isoform X2 [Cucurbita maxima]	[more]
XP_022981041.1	4.8e-78	68.89	uncharacterized protein LOC111480308 isoform X1 [Cucurbita maxima]	[more]
KAG6608135.1	9.0e-77	68.89	hypothetical protein SDJN03_01477, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0005888.2 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0005888.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJI3	1.4e-78	69.52	uncharacterized protein LOC111446021 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]
A0A6J1ISW2	1.8e-78	69.14	uncharacterized protein LOC111480308 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IVD4	2.3e-78	68.89	uncharacterized protein LOC111480308 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IIT2	2.4e-75	66.54	uncharacterized protein LOC111476653 OS=Cucurbita maxima OX=3661 GN=LOC111476653...	[more]
A0A6J1FA47	1.0e-73	66.30	uncharacterized protein LOC111443668 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]

BLAST of Sed0005888.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32030.1	3.7e-28	37.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G80610.1	5.7e-21	39.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15800.1	4.9e-20	37.02	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32030.2	1.0e-17	37.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25210.1	6.0e-10	29.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..248
None	No IPR available	PANTHER	PTHR35099:SF2	OS02G0182700 PROTEIN	coord: 1..248
None	No IPR available	PANTHER	PTHR35099	OS02G0182700 PROTEIN	coord: 1..248

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0005888	Sed0005888	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005888.2-three_prime_utr	Sed0005888.2-three_prime_utr-LG05:31035436..31035680	three_prime_UTR
Sed0005888.2-three_prime_utr	Sed0005888.2-three_prime_utr-LG05:31035764..31035770	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005888.2-exon	Sed0005888.2-exon-LG05:31035436..31035680	exon
Sed0005888.2-exon	Sed0005888.2-exon-LG05:31035764..31036019	exon
Sed0005888.2-exon	Sed0005888.2-exon-LG05:31036289..31036357	exon
Sed0005888.2-exon	Sed0005888.2-exon-LG05:31036983..31037045	exon
Sed0005888.2-exon	Sed0005888.2-exon-LG05:31037273..31037305	exon
Sed0005888.2-exon	Sed0005888.2-exon-LG05:31038996..31039424	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005888.2-cds	Sed0005888.2-cds-LG05:31035771..31036019	CDS
Sed0005888.2-cds	Sed0005888.2-cds-LG05:31036289..31036357	CDS
Sed0005888.2-cds	Sed0005888.2-cds-LG05:31036983..31037045	CDS
Sed0005888.2-cds	Sed0005888.2-cds-LG05:31037273..31037305	CDS
Sed0005888.2-cds	Sed0005888.2-cds-LG05:31038996..31039328	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0005888.2-five_prime_utr	Sed0005888.2-five_prime_utr-LG05:31039329..31039424	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0005888.2	Sed0005888.2-protein	polypeptide