Sed0004949.1 (mRNA) Chayote v1

Overview


Name	Sed0004949.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Pyridoxal 5'-phosphate synthase subunit PdxS
Location	LG02: 35347248 .. 35348463 (-)
Sequence length	1216
RNA-Seq Expression	Sed0004949.1
Synteny	Sed0004949.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAGAAAATGGCAGGATCCAACGTGGTAGCGGTGTACGGGAACGGACCTCTAACGGAGGCGAAGCAATCCCCGTTCTCCGTCAAGGTGGGGCTGGCTCAGATGCTCCGCGGCGGCGTCATCATGGACGTCGTCAACGCCGACCAGGCTCGCATCGCCGAGGAGGCCGGAGCCTGCGCCGTCATGGCCTTGGAGCGCGTCCCCGCCGACATCCGATCCCAAGGCGGCGTCGCCCGAATGACCGACCCCCACCTCATCAAGCAAATCAAACAGGCCGTTACCATCCCCGTCATGGCCAAGGCCCGAATCGGCCATTTCGTGGAGGCTCAGATTCTGGAAGCTATCGGTATCGATTACGTGGACGAGAGCGAGGTTCTCACCCTCGCCGACGAACACAACCACATCAACAAGCACAACTTCCGCATTCCCTTCGTCTGCGGGTGCCGCAACCTCGGCGAGGCCCTGCGCCGCATTCGCGAGGGCGCGGCCATGATCAGGACCAAGGGAGAGGCTGGCACTGGGAATATCATCGAGGCCGTGCGCCACGTGCGCTCCGTGATGGGGGACATTAGGCTGTTGAGGAACATGGACGATGATGAGGTCTTCACCTTCGCTAAGAACATTTCTGCGCCCTATGATTTGGTCTTGCAGACGAAGCAGCTGGGGCGGCTTCCTGTGGTTCAGTTTGCGGCGGGTGGTGTGGCCACCCCGGCTGATGCGGCCCTCATGATGCAGCTTGGATGTGATGGCGTGTTCGTGGGGTCCGGTGTGTTTAAGAGCGGGGACCCCGCGAAGCGAGCCAAGGCGATTGTGCAGGCGGTTACTCATTATAATGATCCGGAGGTGCTGTTGGAAGTCAGCTGTGGGCTTGGGGAGGCAATGGTGGGGCTCAACATGACGGATAAGGTCGAAAGGTTCGCTGATAGATCGGAGTAAGACTCGGCGTACAATTCCGAATCCCTTCCTGGATTTCAGAACTTAATGAAACATATATCCAGCTACAAGGGATTGAATTTTCCTGTTTCGATTTACTTGCTTTGAAATGCCACTTTTATTCCTTATTGAACATCTTTAATACAAATATTACTTTTTTGTTTGATTTGTGACACCTTTTGGATGCATTGGATTTTTCAACATATGATCATTAAATCTCCATCAAGCTTAGTTTCAACTTAGAACAATAATATGTAATTGAGAAATTATACCACCACAA

mRNA sequence

AAAAGAAAGAAAATGGCAGGATCCAACGTGGTAGCGGTGTACGGGAACGGACCTCTAACGGAGGCGAAGCAATCCCCGTTCTCCGTCAAGGTGGGGCTGGCTCAGATGCTCCGCGGCGGCGTCATCATGGACGTCGTCAACGCCGACCAGGCTCGCATCGCCGAGGAGGCCGGAGCCTGCGCCGTCATGGCCTTGGAGCGCGTCCCCGCCGACATCCGATCCCAAGGCGGCGTCGCCCGAATGACCGACCCCCACCTCATCAAGCAAATCAAACAGGCCGTTACCATCCCCGTCATGGCCAAGGCCCGAATCGGCCATTTCGTGGAGGCTCAGATTCTGGAAGCTATCGGTATCGATTACGTGGACGAGAGCGAGGTTCTCACCCTCGCCGACGAACACAACCACATCAACAAGCACAACTTCCGCATTCCCTTCGTCTGCGGGTGCCGCAACCTCGGCGAGGCCCTGCGCCGCATTCGCGAGGGCGCGGCCATGATCAGGACCAAGGGAGAGGCTGGCACTGGGAATATCATCGAGGCCGTGCGCCACGTGCGCTCCGTGATGGGGGACATTAGGCTGTTGAGGAACATGGACGATGATGAGGTCTTCACCTTCGCTAAGAACATTTCTGCGCCCTATGATTTGGTCTTGCAGACGAAGCAGCTGGGGCGGCTTCCTGTGGTTCAGTTTGCGGCGGGTGGTGTGGCCACCCCGGCTGATGCGGCCCTCATGATGCAGCTTGGATGTGATGGCGTGTTCGTGGGGTCCGGTGTGTTTAAGAGCGGGGACCCCGCGAAGCGAGCCAAGGCGATTGTGCAGGCGGTTACTCATTATAATGATCCGGAGGTGCTGTTGGAAGTCAGCTGTGGGCTTGGGGAGGCAATGGTGGGGCTCAACATGACGGATAAGGTCGAAAGGTTCGCTGATAGATCGGAGTAAGACTCGGCGTACAATTCCGAATCCCTTCCTGGATTTCAGAACTTAATGAAACATATATCCAGCTACAAGGGATTGAATTTTCCTGTTTCGATTTACTTGCTTTGAAATGCCACTTTTATTCCTTATTGAACATCTTTAATACAAATATTACTTTTTTGTTTGATTTGTGACACCTTTTGGATGCATTGGATTTTTCAACATATGATCATTAAATCTCCATCAAGCTTAGTTTCAACTTAGAACAATAATATGTAATTGAGAAATTATACCACCACAA

Coding sequence (CDS)

ATGGCAGGATCCAACGTGGTAGCGGTGTACGGGAACGGACCTCTAACGGAGGCGAAGCAATCCCCGTTCTCCGTCAAGGTGGGGCTGGCTCAGATGCTCCGCGGCGGCGTCATCATGGACGTCGTCAACGCCGACCAGGCTCGCATCGCCGAGGAGGCCGGAGCCTGCGCCGTCATGGCCTTGGAGCGCGTCCCCGCCGACATCCGATCCCAAGGCGGCGTCGCCCGAATGACCGACCCCCACCTCATCAAGCAAATCAAACAGGCCGTTACCATCCCCGTCATGGCCAAGGCCCGAATCGGCCATTTCGTGGAGGCTCAGATTCTGGAAGCTATCGGTATCGATTACGTGGACGAGAGCGAGGTTCTCACCCTCGCCGACGAACACAACCACATCAACAAGCACAACTTCCGCATTCCCTTCGTCTGCGGGTGCCGCAACCTCGGCGAGGCCCTGCGCCGCATTCGCGAGGGCGCGGCCATGATCAGGACCAAGGGAGAGGCTGGCACTGGGAATATCATCGAGGCCGTGCGCCACGTGCGCTCCGTGATGGGGGACATTAGGCTGTTGAGGAACATGGACGATGATGAGGTCTTCACCTTCGCTAAGAACATTTCTGCGCCCTATGATTTGGTCTTGCAGACGAAGCAGCTGGGGCGGCTTCCTGTGGTTCAGTTTGCGGCGGGTGGTGTGGCCACCCCGGCTGATGCGGCCCTCATGATGCAGCTTGGATGTGATGGCGTGTTCGTGGGGTCCGGTGTGTTTAAGAGCGGGGACCCCGCGAAGCGAGCCAAGGCGATTGTGCAGGCGGTTACTCATTATAATGATCCGGAGGTGCTGTTGGAAGTCAGCTGTGGGCTTGGGGAGGCAATGGTGGGGCTCAACATGACGGATAAGGTCGAAAGGTTCGCTGATAGATCGGAGTAA

Protein sequence

MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKVERFADRSE

Homology

[Close]

BLAST of Sed0004949.1 vs. NCBI nr
Match: XP_022948734.1 (probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita moschata] >XP_022971382.1 probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita maxima] >XP_023539289.1 probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita pepo subsp. pepo] >KAG6596346.1 putative pyridoxal 5'-phosphate synthase subunit PDX1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027897.1 putative pyridoxal 5'-phosphate synthase subunit PDX1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 574.3 bits (1479), Expect = 6.2e-160
Identity = 292/308 (94.81%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK I+APYDLVLQTKQLGRLPVV FAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVLQTKQLGRLPVVHFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLNMTDKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNMTDKV 300

Query: 301 ERFADRSE 309
           ERFA+RSE
Sbjct: 301 ERFANRSE 308

[Close]

BLAST of Sed0004949.1 vs. NCBI nr
Match: XP_022934474.1 (probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita moschata] >XP_022982755.1 probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita maxima] >XP_023527560.1 probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita pepo subsp. pepo] >KAG6580475.1 putative pyridoxal 5'-phosphate synthase subunit PDX1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017225.1 putative pyridoxal 5'-phosphate synthase subunit PDX1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572.0 bits (1473), Expect = 3.1e-159
Identity = 290/308 (94.16%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK ++APYDLVLQTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKLAAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLN+ DKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNLNDKV 300

Query: 301 ERFADRSE 309
           ERFA RSE
Sbjct: 301 ERFASRSE 308

[Close]

BLAST of Sed0004949.1 vs. NCBI nr
Match: XP_004137720.1 (probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucumis sativus] >XP_008442417.1 PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucumis melo] >XP_038903626.1 probable pyridoxal 5'-phosphate synthase subunit PDX1 [Benincasa hispida] >ADN33796.1 pyridoxal biosynthesis protein [Cucumis melo subsp. melo] >KAA0044169.1 Vitamin B6 biosynthesis protein [Cucumis melo var. makuwa] >KGN58759.1 hypothetical protein Csa_002645 [Cucumis sativus] >TYK24964.1 Vitamin B6 biosynthesis protein [Cucumis melo var. makuwa])

HSP 1 Score: 570.5 bits (1469), Expect = 9.0e-159
Identity = 289/308 (93.83%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK I+APYDLVLQTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPA+RA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLN+ +KV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNLNEKV 300

Query: 301 ERFADRSE 309
           ERFA+RSE
Sbjct: 301 ERFANRSE 308

[Close]

BLAST of Sed0004949.1 vs. NCBI nr
Match: XP_022145563.1 (probable pyridoxal 5'-phosphate synthase subunit PDX1 [Momordica charantia])

HSP 1 Score: 564.3 bits (1453), Expect = 6.4e-157
Identity = 285/308 (92.53%), Postives = 298/308 (96.75%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG L E KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALAETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLAD+ NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVF+FAK I+APYDLVLQTKQLGRLPVV FAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFSFAKKIAAPYDLVLQTKQLGRLPVVHFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPA+RA+AIVQAVTHYNDPEVL +VSCGLGEAMVGLN+ DKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPEVLADVSCGLGEAMVGLNLNDKV 300

Query: 301 ERFADRSE 309
           ERFA+RSE
Sbjct: 301 ERFANRSE 308

[Close]

BLAST of Sed0004949.1 vs. NCBI nr
Match: KAF8369569.1 (hypothetical protein HHK36_032413 [Tetracentron sinense])

HSP 1 Score: 559.3 bits (1440), Expect = 2.1e-155
Identity = 286/309 (92.56%), Postives = 299/309 (96.76%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VV VYGNG LTEAK+SPFSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVMA
Sbjct: 1   MAGSGVVTVYGNGALTEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIR+LRNMDDDEVFTFAK I+APYDLV+QTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTD-K 300
           MQLGCDGVFVGSGVFKSGDPA+RA+AIVQAVTHY+DP+VL EVSCGLGEAMVGLN+ D K
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGLNLKDEK 300

Query: 301 VERFADRSE 309
           VERFA RSE
Sbjct: 301 VERFASRSE 309

[Close]

BLAST of Sed0004949.1 vs. ExPASy Swiss-Prot
Match: Q39963 (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis OX=3981 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 3.3e-156
Identity = 279/309 (90.29%), Postives = 298/309 (96.44%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAG+ VVAVYGNG +TE K+SPFSVKVGLAQMLRGGVIMDVVN +QARIAEEAGACAVMA
Sbjct: 1   MAGTGVVAVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQ+VTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLT ADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN+IEAVRHV
Sbjct: 121 EVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK I+APYDLV+QTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTD-K 300
           MQLGCDGVFVGSGVFKSGDPA+RA+AIVQAVTHY+DP++L EVSCGLGEAMVG+N+ D K
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGINLNDKK 300

Query: 301 VERFADRSE 309
           VERFA+RSE
Sbjct: 301 VERFANRSE 309

[Close]

BLAST of Sed0004949.1 vs. ExPASy Swiss-Prot
Match: Q8L940 (Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana OX=3702 GN=PDX13 PE=1 SV=2)

HSP 1 Score: 551.6 bits (1420), Expect = 5.7e-156
Identity = 277/309 (89.64%), Postives = 300/309 (97.09%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           M G+ VVAVYGNG +TEAK+SPFSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVMA
Sbjct: 1   MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP +IK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDY+DES
Sbjct: 61  LERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE +HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSV GDIR+LRNMDDDEVFTFAK ++APYDLV+QTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTD-K 300
           MQLGCDGVFVGSG+FKSGDPA+RA+AIVQAVTHY+DPE+L+EVSCGLGEAMVG+N+ D K
Sbjct: 241 MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDEK 300

Query: 301 VERFADRSE 309
           VERFA+RSE
Sbjct: 301 VERFANRSE 309

[Close]

BLAST of Sed0004949.1 vs. ExPASy Swiss-Prot
Match: Q9FT25 (Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris OX=3885 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 5.3e-154
Identity = 278/308 (90.26%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 3   GSNVVAVY-GNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMAL 62
           GS VVA+Y GNG +TE K+SPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMAL
Sbjct: 5   GSRVVALYDGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMAL 64

Query: 63  ERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 122
           ERVPADIR+QGGVARM+DP LIK+IK+AVTIPVMAKARIGHFVEAQILEAIGIDYVDESE
Sbjct: 65  ERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 124

Query: 123 VLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVR 182
           VLTLAD+ NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVR
Sbjct: 125 VLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVR 184

Query: 183 SVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALMM 242
           SVM DIR+LRNMDDDEVFTFAK+I+APYDLV+QTKQLGRLPVV FAAGGVATPADAALMM
Sbjct: 185 SVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMM 244

Query: 243 QLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTD-KV 302
           QLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHY+DPE+L EVSCGLGEAMVG+N++D  V
Sbjct: 245 QLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLSDTNV 304

Query: 303 ERFADRSE 309
           ERFA+RSE
Sbjct: 305 ERFANRSE 312

[Close]

BLAST of Sed0004949.1 vs. ExPASy Swiss-Prot
Match: O80448 (Pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Arabidopsis thaliana OX=3702 GN=PDX11 PE=1 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 1.9e-151
Identity = 273/309 (88.35%), Postives = 291/309 (94.17%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQ-SPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVM 60
           MAG+ VVAVYG G +TE KQ SPFSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
           ALERVPADIR+QGGVARM+DP +IK+IK AVTIPVMAKARIGHFVEAQILEAIG+DYVDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120

Query: 121 SEVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180
           SEVLTLADE NHINKHNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRH
Sbjct: 121 SEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRH 180

Query: 181 VRSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAAL 240
           VRSV G IRLLR+MDDDEVFT+AK I+APYDLV+QTK+LGRLPVVQFAAGGVATPADAAL
Sbjct: 181 VRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDK 300
           MMQLGCDGVFVGSGVFKSGDP KRAKAIVQAVT+Y D  VL EVSCGLGEAMVGLN+ DK
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPVKRAKAIVQAVTNYRDAAVLAEVSCGLGEAMVGLNLDDK 300

Query: 301 VERFADRSE 309
           VERFA RSE
Sbjct: 301 VERFASRSE 309

[Close]

BLAST of Sed0004949.1 vs. ExPASy Swiss-Prot
Match: Q9AT63 (Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Ginkgo biloba OX=3311 GN=PDX1 PE=2 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.8e-144
Identity = 259/309 (83.82%), Postives = 285/309 (92.23%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MA   VV VYG+G +T+ K S ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVMA
Sbjct: 1   MASDGVVTVYGDGAITDTKVSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IK AVTIPVMAKARIGHFVEAQILEAIGIDY+DES
Sbjct: 61  LERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLT AD+ +HINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTGN+IEAVRHV
Sbjct: 121 EVLTPADDXHHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSV+GDIR L+++DDDEVF FAK I+APY+LV QTKQLGRLPVV FAAGGVATPADAALM
Sbjct: 181 RSVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTD-K 300
           MQLGCDGVFVGSGVFKSGDPA+RA+AIVQAVTHYNDP +L EVSC LGEAMVG+N+ D K
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPHILAEVSCSLGEAMVGINLKDEK 300

Query: 301 VERFADRSE 309
           VER+A+RSE
Sbjct: 301 VERYAERSE 309

[Close]

BLAST of Sed0004949.1 vs. ExPASy TrEMBL
Match: A0A6J1I1T0 (probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita maxima OX=3661 GN=LOC111470122 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.0e-160
Identity = 292/308 (94.81%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK I+APYDLVLQTKQLGRLPVV FAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVLQTKQLGRLPVVHFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLNMTDKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNMTDKV 300

Query: 301 ERFADRSE 309
           ERFA+RSE
Sbjct: 301 ERFANRSE 308

[Close]

BLAST of Sed0004949.1 vs. ExPASy TrEMBL
Match: A0A6J1GAT0 (probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita moschata OX=3662 GN=LOC111452310 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.0e-160
Identity = 292/308 (94.81%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK I+APYDLVLQTKQLGRLPVV FAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVLQTKQLGRLPVVHFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLNMTDKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNMTDKV 300

Query: 301 ERFADRSE 309
           ERFA+RSE
Sbjct: 301 ERFANRSE 308

[Close]

BLAST of Sed0004949.1 vs. ExPASy TrEMBL
Match: A0A6J1J3Q7 (probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita maxima OX=3661 GN=LOC111481529 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 290/308 (94.16%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK ++APYDLVLQTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKLAAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLN+ DKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNLNDKV 300

Query: 301 ERFADRSE 309
           ERFA RSE
Sbjct: 301 ERFASRSE 308

[Close]

BLAST of Sed0004949.1 vs. ExPASy TrEMBL
Match: A0A6J1F2P6 (probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita moschata OX=3662 GN=LOC111441643 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.5e-159
Identity = 290/308 (94.16%), Postives = 299/308 (97.08%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK ++APYDLVLQTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKLAAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPAKRA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLN+ DKV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNLNDKV 300

Query: 301 ERFADRSE 309
           ERFA RSE
Sbjct: 301 ERFASRSE 308

[Close]

BLAST of Sed0004949.1 vs. ExPASy TrEMBL
Match: A0A5D3DMZ6 (Vitamin B6 biosynthesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00810 PE=3 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.3e-159
Identity = 289/308 (93.83%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           MAGS VVAVYGNG LTE KQSPFSVKVGLAQMLRGGVIMDVVNA+QAR+AEEAGACAVMA
Sbjct: 1   MAGSGVVAVYGNGALTETKQSPFSVKVGLAQMLRGGVIMDVVNAEQARVAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP LIK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES
Sbjct: 61  LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE NHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSVMGDIRLLRNMDDDEVFTFAK I+APYDLVLQTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDKV 300
           MQLGCDGVFVGSGVFKSGDPA+RA+AIVQAVTHYNDPEVL EVSCGLGEAMVGLN+ +KV
Sbjct: 241 MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYNDPEVLAEVSCGLGEAMVGLNLNEKV 300

Query: 301 ERFADRSE 309
           ERFA+RSE
Sbjct: 301 ERFANRSE 308

[Close]

BLAST of Sed0004949.1 vs. TAIR 10
Match: AT5G01410.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 551.6 bits (1420), Expect = 4.0e-157
Identity = 277/309 (89.64%), Postives = 300/309 (97.09%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMA 60
           M G+ VVAVYGNG +TEAK+SPFSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVMA
Sbjct: 1   MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 61  LERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120
           LERVPADIR+QGGVARM+DP +IK+IKQAVTIPVMAKARIGHFVEAQILEAIGIDY+DES
Sbjct: 61  LERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES 120

Query: 121 EVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180
           EVLTLADE +HINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
Sbjct: 121 EVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 181 RSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALM 240
           RSV GDIR+LRNMDDDEVFTFAK ++APYDLV+QTKQLGRLPVVQFAAGGVATPADAALM
Sbjct: 181 RSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 241 MQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTD-K 300
           MQLGCDGVFVGSG+FKSGDPA+RA+AIVQAVTHY+DPE+L+EVSCGLGEAMVG+N+ D K
Sbjct: 241 MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDEK 300

Query: 301 VERFADRSE 309
           VERFA+RSE
Sbjct: 301 VERFANRSE 309

[Close]

BLAST of Sed0004949.1 vs. TAIR 10
Match: AT2G38230.1 (pyridoxine biosynthesis 1.1 )

HSP 1 Score: 536.6 bits (1381), Expect = 1.3e-152
Identity = 273/309 (88.35%), Postives = 291/309 (94.17%), Query Frame = 0


Query: 1   MAGSNVVAVYGNGPLTEAKQ-SPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVM 60
           MAG+ VVAVYG G +TE KQ SPFSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1   MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61  ALERVPADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
           ALERVPADIR+QGGVARM+DP +IK+IK AVTIPVMAKARIGHFVEAQILEAIG+DYVDE
Sbjct: 61  ALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120

Query: 121 SEVLTLADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRH 180
           SEVLTLADE NHINKHNF+IPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRH
Sbjct: 121 SEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRH 180

Query: 181 VRSVMGDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAAL 240
           VRSV G IRLLR+MDDDEVFT+AK I+APYDLV+QTK+LGRLPVVQFAAGGVATPADAAL
Sbjct: 181 VRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAAL 240

Query: 241 MMQLGCDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMTDK 300
           MMQLGCDGVFVGSGVFKSGDP KRAKAIVQAVT+Y D  VL EVSCGLGEAMVGLN+ DK
Sbjct: 241 MMQLGCDGVFVGSGVFKSGDPVKRAKAIVQAVTNYRDAAVLAEVSCGLGEAMVGLNLDDK 300

Query: 301 VERFADRSE 309
           VERFA RSE
Sbjct: 301 VERFASRSE 309

[Close]

BLAST of Sed0004949.1 vs. TAIR 10
Match: AT3G16050.1 (pyridoxine biosynthesis 1.2 )

HSP 1 Score: 389.4 bits (999), Expect = 2.6e-108
Identity = 194/304 (63.82%), Postives = 249/304 (81.91%), Query Frame = 0


Query: 7   VAVYGNGPLTEAKQS-PFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALERVP 66
           V +Y    +T+AK++ PFSVKVGLAQ+LRGG I++V + +QA++AE AGAC+V+    V 
Sbjct: 14  VTLYSGTAITDAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVI----VS 73

Query: 67  ADIRSQGGVARMTDPHLIKQIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTL 126
             +RS+GGV RM DP LIK++K+AV++PVMA+AR+GHFVEAQILE++ +DY+DESE++++
Sbjct: 74  DPVRSRGGVRRMPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISV 133

Query: 127 ADEHNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVM 186
           AD+ + INKHNFR PF+CGCR+ GEALRRIREGAAMIR +G+   TGNI E V++VRS+M
Sbjct: 134 ADDDHFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLM 193

Query: 187 GDIRLLRNMDDDEVFTFAKNISAPYDLVLQTKQLGRLPVVQFAAGGVATPADAALMMQLG 246
           G++R+L NMDDDEVFTFAK ISAPYDLV QTKQ+GR+PVVQFA+GG+ TPADAALMMQLG
Sbjct: 194 GEVRVLNNMDDDEVFTFAKKISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLG 253

Query: 247 CDGVFVGSGVFKSGDPAKRAKAIVQAVTHYNDPEVLLEVSCGLGEAMVGLNMT-DKVERF 306
           CDGVFVGS VF   DP K+ ++IVQAV HYNDP VL E+S GL  AM  LN+  D+++ F
Sbjct: 254 CDGVFVGSEVFDGPDPFKKLRSIVQAVQHYNDPHVLAEMSSGLENAMESLNVRGDRIQDF 313

Query: 307 ADRS 308
              S
Sbjct: 314 GQGS 313

[Close]

BLAST of Sed0004949.1 vs. TAIR 10
Match: AT2G38210.1 (putative PDX1-like protein 4 )

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MAGSNVVAVYGNGPLTEAKQ-SPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVM 60
          MAG+ VVAVYG G +TE KQ SPFSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1  MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60

Query: 61 ALERVPADIRSQGGVAR 77
          ALERVPADIR+QGGVAR
Sbjct: 61 ALERVPADIRAQGGVAR 77

The following BLAST results are available for this feature:

BLAST of Sed0004949.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948734.1	6.2e-160	94.81	probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita moschata] >XP_0...	[more]
XP_022934474.1	3.1e-159	94.16	probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucurbita moschata] >XP_0...	[more]
XP_004137720.1	9.0e-159	93.83	probable pyridoxal 5'-phosphate synthase subunit PDX1 [Cucumis sativus] >XP_0084...	[more]
XP_022145563.1	6.4e-157	92.53	probable pyridoxal 5'-phosphate synthase subunit PDX1 [Momordica charantia]	[more]
KAF8369569.1	2.1e-155	92.56	hypothetical protein HHK36_032413 [Tetracentron sinense]	[more]

BLAST of Sed0004949.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39963	3.3e-156	90.29	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis OX=3...	[more]
Q8L940	5.7e-156	89.64	Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FT25	5.3e-154	90.26	Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris OX=3885 GN=PD...	[more]
O80448	1.9e-151	88.35	Pyridoxal 5'-phosphate synthase subunit PDX1.1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9AT63	3.8e-144	83.82	Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Ginkgo biloba OX=3311 G...	[more]

BLAST of Sed0004949.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1T0	3.0e-160	94.81	probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GAT0	3.0e-160	94.81	probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1J3Q7	1.5e-159	94.16	probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1F2P6	1.5e-159	94.16	probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Cucurbita moschata OX=3...	[more]
A0A5D3DMZ6	4.3e-159	93.83	Vitamin B6 biosynthesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Sed0004949.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01410.1	4.0e-157	89.64	Aldolase-type TIM barrel family protein	[more]
AT2G38230.1	1.3e-152	88.35	pyridoxine biosynthesis 1.1	[more]
AT3G16050.1	2.6e-108	63.82	pyridoxine biosynthesis 1.2	[more]
AT2G38210.1	1.4e-29	88.31	putative PDX1-like protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PIRSF	PIRSF029271	Pdx1	coord: 13..308 e-value: 4.1E-155 score: 513.3
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	TIGRFAM	TIGR00343	TIGR00343	coord: 25..298 e-value: 3.8E-143 score: 474.2
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PANTHER	PTHR31829	PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATED	coord: 1..308
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PROSITE	PS01235	PDXS_SNZ_1	coord: 221..239
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	HAMAP	MF_01824	PdxS	coord: 20..308 score: 49.539951
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	PROSITE	PS51129	PDXS_SNZ_2	coord: 25..308 score: 165.021866
IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	CDD	cd04727	pdxS	coord: 27..307 e-value: 0.0 score: 540.681
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 15..307 e-value: 1.2E-157 score: 525.4
IPR033755	PdxS/SNZ N-terminal domain	PFAM	PF01680	SOR_SNZ	coord: 23..228 e-value: 1.1E-111 score: 371.5
None	No IPR available	PANTHER	PTHR31829:SF6	PYRIDOXAL 5'-PHOSPHATE SYNTHASE PDX1-LIKE 4-RELATED	coord: 1..308
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 34..280

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0004949	Sed0004949	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004949.1-exon	Sed0004949.1-exon-LG02:35347248..35348463	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004949.1-three_prime_utr	Sed0004949.1-three_prime_utr-LG02:35347248..35347524	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004949.1-cds	Sed0004949.1-cds-LG02:35347525..35348451	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004949.1-five_prime_utr	Sed0004949.1-five_prime_utr-LG02:35348452..35348463	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0004949.1	Sed0004949.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042823	pyridoxal phosphate biosynthetic process
biological_process	GO:0042819	vitamin B6 biosynthetic process
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0008615	pyridoxine biosynthetic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016843	amine-lyase activity