Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATCCCCACATCCATGGATCCTCTCAACAAACTCAGCCTCTGTCTTTTAGCCACATCTCTCCTTCTGGCCACTGCCCATGGATACGCCGTCGTCACCGGTACCGTCTTCTGTGATCAATGCAAGGACGGGCAAATATCCATGTTCGATTACCCCATGAACGGTAAGGGTACTAAAATTTACTCCAACCTATCAACTTAAAACTCCGTTTAATAATTCAAATTTTTAGAAATCATTTTCTTTTTCTTAATAAGAAATTTAAAGCTATTTGATTTGTTTTCAATTTTTAATTTAGTTTTTAAAAATATAGATAAAGTAAAGGAAAATATATGTTAGAAGTAATTGGTGTAGCCTAATTTGTTAGGTTTGAAAGTTTTGTTGTTAGTAATGAGCTTATTTTATTACAGGAGTTAAAGTGATGGTGGCTTGTGACAATGGCAATGGGGGAGTTAGGAATGTGAGAGAGGAGACAACAAATTTGTTTGGAAGCTATACGATGAGATTCGACGGTATGCCGGATCTTAACGGTTGTTATGCGACGGTTAGTGGAGGTGAAGAGGGAACGGCGGCGAACTGCGGCGGAGCTACGGGCCCACCGAAGAGTGTTAGGTTGATGTTTAAGTTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTACTGTCACAACCAGCTCAACCGATGTCGTTCTGTTCGGCATCGGTTAATCCCGTCCCGGTCCCAGCACCGGTTACAATGCCGCCCCCATCTCCATCTTTGTCGTTGTCTCCGCCGCTTCTGCCTCCACCTCTTTTCAAGATGCCGCCGCTTCCTCCGCTACCACCACTTCCGCTGCTGCCAACAGTGCCATTCTTGGAAGCATCTGCTTGTCAACACGAGTAAGTGAAATACATTGGCCTTTAACTATTTATTTGCTAAATATATTATTTGTTCCATAAAGCATATAACATTTGTGTATGTTGATCACCATTTTATGAGTTTCAATTTTAGTATAGAGTACTAAAAATAATTAGCATAGAGTTATTACAATCGAGTCTTAGAAATAAATGTTAAAATACTTCACTTTCAAAAGGGTTCTTAAAACTACTTCTTATTGTCCATTTTGTAATGGTTTGTTTGTGACAAGCTAAGAAAATAGTTATCTTGTGTTGAAAATGATAAAAAAATAATTGTAATTAAAATTATTGAAACTTAAATATAAATCGATTGGTTAAATTATAAATCATTAATTAAAAGGTTACAAACTTACAAGTTTGATCTCTCATTCTGATATAGTTTAACATGTTCTTTTTTCTTATTAGAATTTAACCCTATTAATTAGCTACAACATTTTTGCTTTAAATATTACTACATATCTAATTCAAAATATATATCTTCAACAAAAAGTTGGATTCTTTTTTTTTTTTTTGATATAAGAGAAGTTGGGAGACATAAATCATAAACTTTTTTTGTCATCAACATAAATAATATGTTAATTGAGTTATATTCACTTTTGATTAAATTTTTTTTTTCATAAATTTGAATTTTTATCCATATGAAAACATTAATCTCCTTTAGAAAAGAAAAGTCGTATTCACATTTTGTTCATAATAAAAAGTTTTAACTTATAACTTGACAATTATGTAATATTTGAGTAAATTAATATAATGATCAAGAATGTCTTAAAAATTAAAAGGTGATGAGGATATGAACAAATCACAAATATAAAGAAAAAAAAAATAACTCTCTAAATATTTGGATACAATTTATTAAAGAAAAACACACAAAGGAATCATATTTTTAATATTTGTAGAGGAAAAAGAGAGAATTTTTAAATAAAAAAAGAACAAAATCTATTTTACGGATAAATTTTAAATTCATTTGAATGGTAGAAAATTAAATTGGATATATTTTAATCTAAATATTTATAAAATGGGTTAATATATACTATCATTCTTTAACAGGAATTGGACAAGTCCAGAATACAGATGTTATTGGAGGGTAGTGAACCCAGACACAAAGGTAGCCGTTGTATTTGGACTAGTAGCAGCCAACCGTTACGGAACGGACCTAACCCTATGGAACGGCCTACAGGGCTGCGGAGACCCTTATAGGACCCTTTTAAGGGAAGCCATAACGGCGTTCCTTAATTCCTACAATTCCCTTCATTACCCCTATTCTACAGTGTCCGTAATCCAGCGACTTAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCTTGCTGGGCTTCGTTTCAAACGGGCCAATTCTGGTTATGGCCACGTCACCTGCAAATTCGATCCTTGCCACTAATAGAATCTATATTTTATCTCGAATATTTATTTACTCATAGATATTGATTATAACTACTACGTAAGATCTTGGATGTTGTTTAGTTTGTAATACTTGTGGAGTTTATTCAAGCTTTTAGTTCATCTTTGGTGGCTATGAGGTAAGAACTTGATTTGATAAGATTGCACATTCCTTTTATTAGATAAACACAAATATATTCTAGTTATTGGATCTTGTAAGATATTATAATCTTTAGTTTTAGTAAAATGTTGTTATAATCGTTTGTTTTATCTAGTCTTCCCTAATCCAATTTTCTATATATAAGTACATCATATAGAGG
mRNA sequence
CCATCCCCACATCCATGGATCCTCTCAACAAACTCAGCCTCTGTCTTTTAGCCACATCTCTCCTTCTGGCCACTGCCCATGGATACGCCGTCGTCACCGGTACCGTCTTCTGTGATCAATGCAAGGACGGGCAAATATCCATGTTCGATTACCCCATGAACGGAGTTAAAGTGATGGTGGCTTGTGACAATGGCAATGGGGGAGTTAGGAATGTGAGAGAGGAGACAACAAATTTGTTTGGAAGCTATACGATGAGATTCGACGGTATGCCGGATCTTAACGGTTGTTATGCGACGGTTAGTGGAGGTGAAGAGGGAACGGCGGCGAACTGCGGCGGAGCTACGGGCCCACCGAAGAGTGTTAGGTTGATGTTTAAGTTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTACTGTCACAACCAGCTCAACCGATGTCGTTCTGTTCGGCATCGGTTAATCCCGTCCCGGTCCCAGCACCGGTTACAATGCCGCCCCCATCTCCATCTTTGTCGTTGTCTCCGCCGCTTCTGCCTCCACCTCTTTTCAAGATGCCGCCGCTTCCTCCGCTACCACCACTTCCGCTGCTGCCAACAGTGCCATTCTTGGAAGCATCTGCTTGTCAACACGAGAATTGGACAAGTCCAGAATACAGATGTTATTGGAGGGTAGTGAACCCAGACACAAAGGTAGCCGTTGTATTTGGACTAGTAGCAGCCAACCGTTACGGAACGGACCTAACCCTATGGAACGGCCTACAGGGCTGCGGAGACCCTTATAGGACCCTTTTAAGGGAAGCCATAACGGCGTTCCTTAATTCCTACAATTCCCTTCATTACCCCTATTCTACAGTGTCCGTAATCCAGCGACTTAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCTTGCTGGGCTTCGTTTCAAACGGGCCAATTCTGGTTATGGCCACGTCACCTGCAAATTCGATCCTTGCCACTAATAGAATCTATATTTTATCTCGAATATTTATTTACTCATAGATATTGATTATAACTACTACGTAAGATCTTGGATGTTGTTTAGTTTGTAATACTTGTGGAGTTTATTCAAGCTTTTAGTTCATCTTTGGTGGCTATGAGGTAAGAACTTGATTTGATAAGATTGCACATTCCTTTTATTAGATAAACACAAATATATTCTAGTTATTGGATCTTGTAAGATATTATAATCTTTAGTTTTAGTAAAATGTTGTTATAATCGTTTGTTTTATCTAGTCTTCCCTAATCCAATTTTCTATATATAAGTACATCATATAGAGG
Coding sequence (CDS)
ATGGATCCTCTCAACAAACTCAGCCTCTGTCTTTTAGCCACATCTCTCCTTCTGGCCACTGCCCATGGATACGCCGTCGTCACCGGTACCGTCTTCTGTGATCAATGCAAGGACGGGCAAATATCCATGTTCGATTACCCCATGAACGGAGTTAAAGTGATGGTGGCTTGTGACAATGGCAATGGGGGAGTTAGGAATGTGAGAGAGGAGACAACAAATTTGTTTGGAAGCTATACGATGAGATTCGACGGTATGCCGGATCTTAACGGTTGTTATGCGACGGTTAGTGGAGGTGAAGAGGGAACGGCGGCGAACTGCGGCGGAGCTACGGGCCCACCGAAGAGTGTTAGGTTGATGTTTAAGTTGTTTAGTATGGAAATGTATGTGGTTGATTCGTTACTGTCACAACCAGCTCAACCGATGTCGTTCTGTTCGGCATCGGTTAATCCCGTCCCGGTCCCAGCACCGGTTACAATGCCGCCCCCATCTCCATCTTTGTCGTTGTCTCCGCCGCTTCTGCCTCCACCTCTTTTCAAGATGCCGCCGCTTCCTCCGCTACCACCACTTCCGCTGCTGCCAACAGTGCCATTCTTGGAAGCATCTGCTTGTCAACACGAGAATTGGACAAGTCCAGAATACAGATGTTATTGGAGGGTAGTGAACCCAGACACAAAGGTAGCCGTTGTATTTGGACTAGTAGCAGCCAACCGTTACGGAACGGACCTAACCCTATGGAACGGCCTACAGGGCTGCGGAGACCCTTATAGGACCCTTTTAAGGGAAGCCATAACGGCGTTCCTTAATTCCTACAATTCCCTTCATTACCCCTATTCTACAGTGTCCGTAATCCAGCGACTTAATTGGGCCTTATTGGGCTCTCAACGGGCCGTCCTCCTTGCTGGGCTTCGTTTCAAACGGGCCAATTCTGGTTATGGCCACGTCACCTGCAAATTCGATCCTTGCCACTAA
Protein sequence
MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNGNGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMFKLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKMPPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGTDLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAVLLAGLRFKRANSGYGHVTCKFDPCH
Homology
BLAST of Sed0004865.1 vs. NCBI nr
Match:
XP_038900829.1 (uncharacterized protein LOC120087893 [Benincasa hispida])
HSP 1 Score: 542.0 bits (1395), Expect = 3.6e-150
Identity = 264/324 (81.48%), Postives = 289/324 (89.20%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MDPL+KL LC L +LLLATAHGYAVVTGTVFCDQCKDG ISMFDYPMNGVKV VAC +G
Sbjct: 1 MDPLSKLKLCFLTATLLLATAHGYAVVTGTVFCDQCKDGHISMFDYPMNGVKVKVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDG PDL+GCYAT+ G E+GT +CGGA GPPKS+RLMF
Sbjct: 61 NGGVTYMREETTNLFGSFTMRFDGTPDLSGCYATIGGTEQGTTMDCGGAGGPPKSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LF MEMYVVDSL++QPA+PMSFCSASVNPVPVPAPV PPSPSL LSPP LPP FK+
Sbjct: 121 RLFDMEMYVVDSLVTQPAKPMSFCSASVNPVPVPAPVITKPPSPSLPLSPPPLPPS-FKL 180
Query: 181 PP---LPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANR 240
PP LPPLPPLP LP VPFLEASACQH+NWT+P+YRCYWR VNPDTKV V+FGL+AAN+
Sbjct: 181 PPLPQLPPLPPLPKLPPVPFLEASACQHDNWTNPDYRCYWRAVNPDTKVGVIFGLLAANQ 240
Query: 241 YGTDLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAV 300
YGTDLTLWNGLQG GDPYRTLLREAITAFLNSYNSL++PY T+SV+QRLNWALLGS RAV
Sbjct: 241 YGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSLNFPYPTISVVQRLNWALLGSPRAV 300
Query: 301 LLAGLRFKRANSGYGHVTCKFDPC 322
LL LRFKRANSGYGHVTCKFDPC
Sbjct: 301 LLTALRFKRANSGYGHVTCKFDPC 323
BLAST of Sed0004865.1 vs. NCBI nr
Match:
XP_023513005.1 (uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 518.8 bits (1335), Expect = 3.2e-143
Identity = 257/324 (79.32%), Postives = 281/324 (86.73%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MD L+KL LC LA +LL ATAHGYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVAC NG
Sbjct: 1 MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGVKVMVACGNG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDGMPDL+GCYATV G EG +CGGA PP+S+RLMF
Sbjct: 61 NGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGIGEGATTDCGGAGSPPRSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LFSMEMYVVDSLLSQPAQPMSFCSASV+PVPVPAPV MPP PP +PPP FKM
Sbjct: 121 RLFSMEMYVVDSLLSQPAQPMSFCSASVHPVPVPAPVVMPP--------PPNVPPP-FKM 180
Query: 181 PP---LPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANR 240
PP LPP+PPLP LP +PFLEASACQHENWT+P+Y+CYWR VNPD KV VVFG++AANR
Sbjct: 181 PPLPQLPPIPPLPQLPPMPFLEASACQHENWTNPDYKCYWRAVNPDMKVGVVFGVLAANR 240
Query: 241 YGTDLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAV 300
YGTDLTLWNGLQG GDPYRTLLREAITAFLNSYNS+H+PY T+SV++ LNWALLGSQRAV
Sbjct: 241 YGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALLGSQRAV 300
Query: 301 LLAGLRFKRANSGYGHVTCKFDPC 322
L LRFKRANSG HVTCKFDPC
Sbjct: 301 LHTALRFKRANSGNSHVTCKFDPC 315
BLAST of Sed0004865.1 vs. NCBI nr
Match:
XP_022985735.1 (uncharacterized protein LOC111483701 [Cucurbita maxima])
HSP 1 Score: 518.5 bits (1334), Expect = 4.2e-143
Identity = 256/321 (79.75%), Postives = 278/321 (86.60%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MD L+KL LC LA +LL ATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVAC +G
Sbjct: 1 MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDGMPDL+GCYATV G EG +CGGA PP+S+RLMF
Sbjct: 61 NGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LFSMEMYVVDSLLSQP QPMSFCSASV+PVP PAPV MPPP +L PPL PPL
Sbjct: 121 RLFSMEMYVVDSLLSQPTQPMSFCSASVHPVPAPAPVVMPPPP---NLPPPLKMPPL--- 180
Query: 181 PPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGT 240
P LPPLPPLP LP +PFLE SACQHENWT+P+Y+CYWR VNPDTKV VVFGL+AANRYGT
Sbjct: 181 PQLPPLPPLPQLPPMPFLEVSACQHENWTNPDYKCYWRAVNPDTKVGVVFGLLAANRYGT 240
Query: 241 DLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAVLLA 300
DLTLWNGLQG GDPYRTLLREAITAFLNSYNS+H+PY T+SV++ LNWALLGSQRAVL
Sbjct: 241 DLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALLGSQRAVLHT 300
Query: 301 GLRFKRANSGYGHVTCKFDPC 322
LRFKRANSG HVTCKFDPC
Sbjct: 301 ALRFKRANSGNSHVTCKFDPC 315
BLAST of Sed0004865.1 vs. NCBI nr
Match:
XP_022944208.1 (uncharacterized protein LOC111448725 [Cucurbita moschata] >KAG7010866.1 hypothetical protein SDJN02_27664 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 508.8 bits (1309), Expect = 3.4e-140
Identity = 253/321 (78.82%), Postives = 274/321 (85.36%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MD L L LC LA +LL ATAHGYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVAC +G
Sbjct: 1 MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGVKVMVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDGMPDL+GCYATV G EG +CGGA PP+S+RLMF
Sbjct: 61 NGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LFSMEMYVVDSLLSQPAQ MSFCSASV+PVPVPAPV MP SPP LPPP KM
Sbjct: 121 RLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVPAPVVMP--------SPPNLPPP-SKM 180
Query: 181 PPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGT 240
PLP LPPLP LP +PFLEASACQHENWT+P Y+CYWR VNPD KV VVFG++AANRYGT
Sbjct: 181 LPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPDMKVGVVFGVLAANRYGT 240
Query: 241 DLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAVLLA 300
DLTLWNGLQG GDPYRTLLREAITAFLNSYNS+H+PY +SV++ LNWALLGSQRAVL
Sbjct: 241 DLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEGLNWALLGSQRAVLHT 300
Query: 301 GLRFKRANSGYGHVTCKFDPC 322
LRFKRANSG GHVTCKFDPC
Sbjct: 301 ALRFKRANSGNGHVTCKFDPC 312
BLAST of Sed0004865.1 vs. NCBI nr
Match:
KAG6571035.1 (hypothetical protein SDJN03_29950, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 508.1 bits (1307), Expect = 5.7e-140
Identity = 255/324 (78.70%), Postives = 276/324 (85.19%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MD L L LC LA +LL ATAHGYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVAC +G
Sbjct: 1 MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGVKVMVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDGMPDL+GCYATV G EG +CGGA PP+S+RLMF
Sbjct: 61 NGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LFSMEMYVVDSLLSQPAQPMSFCSASV+PVPV PV MPP PP LPPP FKM
Sbjct: 121 RLFSMEMYVVDSLLSQPAQPMSFCSASVHPVPV--PVVMPP--------PPNLPPP-FKM 180
Query: 181 PP---LPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANR 240
PP LPPLPPLP LP +PFLEASACQHENWT+P Y+CYWR VNPD KV VVFG++AANR
Sbjct: 181 PPLPQLPPLPPLPQLPPMPFLEASACQHENWTNPYYKCYWRAVNPDMKVGVVFGVLAANR 240
Query: 241 YGTDLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAV 300
YGTDLTLWNGLQG GDPYRTLLREAITAFLNSYNS+H+PY +SV++ LNWALLGSQRAV
Sbjct: 241 YGTDLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEGLNWALLGSQRAV 300
Query: 301 LLAGLRFKRANSGYGHVTCKFDPC 322
L LRFKRANSG GHVTCKFDPC
Sbjct: 301 LHTALRFKRANSGNGHVTCKFDPC 313
BLAST of Sed0004865.1 vs. ExPASy TrEMBL
Match:
A0A6J1JC51 (uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701 PE=4 SV=1)
HSP 1 Score: 518.5 bits (1334), Expect = 2.0e-143
Identity = 256/321 (79.75%), Postives = 278/321 (86.60%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MD L+KL LC LA +LL ATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVAC +G
Sbjct: 1 MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDGMPDL+GCYATV G EG +CGGA PP+S+RLMF
Sbjct: 61 NGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LFSMEMYVVDSLLSQP QPMSFCSASV+PVP PAPV MPPP +L PPL PPL
Sbjct: 121 RLFSMEMYVVDSLLSQPTQPMSFCSASVHPVPAPAPVVMPPPP---NLPPPLKMPPL--- 180
Query: 181 PPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGT 240
P LPPLPPLP LP +PFLE SACQHENWT+P+Y+CYWR VNPDTKV VVFGL+AANRYGT
Sbjct: 181 PQLPPLPPLPQLPPMPFLEVSACQHENWTNPDYKCYWRAVNPDTKVGVVFGLLAANRYGT 240
Query: 241 DLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAVLLA 300
DLTLWNGLQG GDPYRTLLREAITAFLNSYNS+H+PY T+SV++ LNWALLGSQRAVL
Sbjct: 241 DLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALLGSQRAVLHT 300
Query: 301 GLRFKRANSGYGHVTCKFDPC 322
LRFKRANSG HVTCKFDPC
Sbjct: 301 ALRFKRANSGNSHVTCKFDPC 315
BLAST of Sed0004865.1 vs. ExPASy TrEMBL
Match:
A0A6J1FXU0 (uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC111448725 PE=4 SV=1)
HSP 1 Score: 508.8 bits (1309), Expect = 1.6e-140
Identity = 253/321 (78.82%), Postives = 274/321 (85.36%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MD L L LC LA +LL ATAHGYAVVTGTVFCDQCKDGQISMFDYP+NGVKVMVAC +G
Sbjct: 1 MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFDYPINGVKVMVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV +REETTNLFGS+TMRFDGMPDL+GCYATV G EG +CGGA PP+S+RLMF
Sbjct: 61 NGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
+LFSMEMYVVDSLLSQPAQ MSFCSASV+PVPVPAPV MP SPP LPPP KM
Sbjct: 121 RLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVPAPVVMP--------SPPNLPPP-SKM 180
Query: 181 PPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGT 240
PLP LPPLP LP +PFLEASACQHENWT+P Y+CYWR VNPD KV VVFG++AANRYGT
Sbjct: 181 LPLPQLPPLPPLPPMPFLEASACQHENWTNPRYKCYWRAVNPDMKVGVVFGVLAANRYGT 240
Query: 241 DLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAVLLA 300
DLTLWNGLQG GDPYRTLLREAITAFLNSYNS+H+PY +SV++ LNWALLGSQRAVL
Sbjct: 241 DLTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEGLNWALLGSQRAVLHT 300
Query: 301 GLRFKRANSGYGHVTCKFDPC 322
LRFKRANSG GHVTCKFDPC
Sbjct: 301 ALRFKRANSGNGHVTCKFDPC 312
BLAST of Sed0004865.1 vs. ExPASy TrEMBL
Match:
A0A6J1CWR4 (uncharacterized protein LOC111015504 OS=Momordica charantia OX=3673 GN=LOC111015504 PE=4 SV=1)
HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131
Identity = 242/321 (75.39%), Postives = 266/321 (82.87%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVACDNG 60
MDPL KL+LC LA SL A A GYAVVTGTVFCDQCKDGQIS+FDYP+NG KVMVAC +G
Sbjct: 1 MDPLKKLNLCFLAASLFFAAAQGYAVVTGTVFCDQCKDGQISLFDYPINGAKVMVACGDG 60
Query: 61 NGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRLMF 120
NGGV REETTNLFGS+TMRFDG PDL+GCYA V GTA CGGA GP KS+RLMF
Sbjct: 61 NGGVTYSREETTNLFGSFTMRFDGTPDLSGCYAAVG----GTATGCGGAVGPAKSLRLMF 120
Query: 121 KLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLFKM 180
++F MEMYVVDSL+SQPA PM FCS SVN PVPAPVT+PPPS SPP PPPL ++
Sbjct: 121 RMFDMEMYVVDSLISQPALPMPFCSPSVN--PVPAPVTVPPPS-----SPP--PPPL-RL 180
Query: 181 PPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGT 240
P LPPLPP VPFLEASACQHENWT+P+YRCYWR VNP+TKV V+FG VAANRYGT
Sbjct: 181 PLLPPLPP------VPFLEASACQHENWTNPDYRCYWRAVNPETKVGVIFGPVAANRYGT 240
Query: 241 DLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALLGSQRAVLLA 300
++TLWNGLQG GDPYRTLLREAITAFLNSYNSLHYPY T+SV+QR+NWALLGS RAVL+
Sbjct: 241 EVTLWNGLQGRGDPYRTLLREAITAFLNSYNSLHYPYPTISVLQRMNWALLGSPRAVLIT 300
Query: 301 GLRFKRANSGYGHVTCKFDPC 322
LRFKRANSG H+TCKF PC
Sbjct: 301 ALRFKRANSGSPHLTCKFHPC 301
BLAST of Sed0004865.1 vs. ExPASy TrEMBL
Match:
A0A5D3BLG6 (Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001410 PE=4 SV=1)
HSP 1 Score: 429.1 bits (1102), Expect = 1.6e-116
Identity = 212/324 (65.43%), Postives = 252/324 (77.78%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISM--FDYPMNGVKVMVACD 60
MDPL K LC LA SL ATA+GY VV+G VFCD+CKDGQ+S+ FDYP+NGVKV +AC
Sbjct: 1 MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
Query: 61 NGNGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRL 120
+G GGV ++REE TN FG YTM F+G PDL+GC ATV+G +G NC GPP+S++L
Sbjct: 61 DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
Query: 121 MFKLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLF 180
+F+L +EMY VD L+SQP QPMSFCS+ PVP P PP PSL P L PPL
Sbjct: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGP----KPPSPPSLPSLPKL--PPLP 180
Query: 181 KMPPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRY 240
K+PPLPP PP+ +P PFLEASACQHENWT+P+Y+CYWR VNPDTKVAV+FG +AA RY
Sbjct: 181 KLPPLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERY 240
Query: 241 GTDLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALL-GSQRAV 300
GTD+TLW GLQG GDPY+TLLREAITAFLNSY+SLH+PY ++SV+Q N AL+ GS+R+V
Sbjct: 241 GTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSV 300
Query: 301 LLAGLRFKRANSGYGHVTCKFDPC 322
L A LRFK ANSG GHVTCKFDPC
Sbjct: 301 LHAALRFKHANSGNGHVTCKFDPC 318
BLAST of Sed0004865.1 vs. ExPASy TrEMBL
Match:
A0A1S3C647 (uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=4 SV=1)
HSP 1 Score: 429.1 bits (1102), Expect = 1.6e-116
Identity = 212/324 (65.43%), Postives = 252/324 (77.78%), Query Frame = 0
Query: 1 MDPLNKLSLCLLATSLLLATAHGYAVVTGTVFCDQCKDGQISM--FDYPMNGVKVMVACD 60
MDPL K LC LA SL ATA+GY VV+G VFCD+CKDGQ+S+ FDYP+NGVKV +AC
Sbjct: 1 MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
Query: 61 NGNGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVSGGEEGTAANCGGATGPPKSVRL 120
+G GGV ++REE TN FG YTM F+G PDL+GC ATV+G +G NC GPP+S++L
Sbjct: 61 DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
Query: 121 MFKLFSMEMYVVDSLLSQPAQPMSFCSASVNPVPVPAPVTMPPPSPSLSLSPPLLPPPLF 180
+F+L +EMY VD L+SQP QPMSFCS+ PVP P PP PSL P L PPL
Sbjct: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGP----KPPSPPSLPSLPKL--PPLP 180
Query: 181 KMPPLPPLPPLPLLPTVPFLEASACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRY 240
K+PPLPP PP+ +P PFLEASACQHENWT+P+Y+CYWR VNPDTKVAV+FG +AA RY
Sbjct: 181 KLPPLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERY 240
Query: 241 GTDLTLWNGLQGCGDPYRTLLREAITAFLNSYNSLHYPYSTVSVIQRLNWALL-GSQRAV 300
GTD+TLW GLQG GDPY+TLLREAITAFLNSY+SLH+PY ++SV+Q N AL+ GS+R+V
Sbjct: 241 GTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSV 300
Query: 301 LLAGLRFKRANSGYGHVTCKFDPC 322
L A LRFK ANSG GHVTCKFDPC
Sbjct: 301 LHAALRFKHANSGNGHVTCKFDPC 318
BLAST of Sed0004865.1 vs. TAIR 10
Match:
AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )
HSP 1 Score: 303.1 bits (775), Expect = 2.6e-82
Identity = 180/363 (49.59%), Postives = 226/363 (62.26%), Query Frame = 0
Query: 1 MDP-LNKLSLCLLATSLLLAT--AHGYAVVTGTVFCDQCKDGQISMFDYPMNGVKVMVAC 60
MDP N L + + L LAT GYA VTG+VFCDQCKDG+ S+FD+P++G+K+ V C
Sbjct: 1 MDPNHNNLLIFVAFFVLCLATNGVTGYATVTGSVFCDQCKDGERSLFDFPVSGIKISVTC 60
Query: 61 DNGNGGVRNVREETTNLFGSYTMRFDGMPDLNGCYATVS-GGEEGTAANCGGATGPPKSV 120
+ NG V REETTN G Y MRFDG PDL+ CYA VS G + ++C A+GP + +
Sbjct: 61 ADENGQVYMSREETTNWLGGYVMRFDGTPDLSNCYAQVSDNGVQQDPSSCSIASGPAQKL 120
Query: 121 RLMFKLFSMEMYVVDSLLSQPAQPMSFC----SASVNPVP-----------------VPA 180
+LMF F +E + D+LL+QP QP SFC +A V P P VP
Sbjct: 121 KLMFSFFGIETFAADALLAQPVQPSSFCPKPPTAPVMPPPQVPVMPPPQVPVKPHPKVPV 180
Query: 181 -----PVTMPPPS-PSLSLSPP-LLPPPLFKMPPLPP--------LPPLPLLPTVPFLEA 240
P T+PPP P +S PP LPPPL + LPP LPPLP +P +PF+E
Sbjct: 181 ISPDPPATLPPPKVPVISPDPPTTLPPPLVPVINLPPVTSPPQFKLPPLPQIPPMPFVEP 240
Query: 241 SACQHENWTSPEYRCYWRVVNPDTKVAVVFGLVAANRYGTDLTLWNGLQGCGDPYRTLLR 300
SAC H+ W PEYRCYWR + PDTKVAV FGLVA YGTD+T+ L G G+ Y+TLLR
Sbjct: 241 SACSHQLWMKPEYRCYWRAIGPDTKVAVAFGLVAGRIYGTDMTVREALDGRGEAYKTLLR 300
Query: 301 EAITAFLNSYNSLHYPYSTVSVIQRLNWALLG-SQRAVLLAGLRFKRANSGYGHVTCKFD 323
EA TA LNSYNSL +PY++V+VI N ALLG S+ VL+ +RF +ANSG TC+F
Sbjct: 301 EATTALLNSYNSLGFPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKANSG----TCRFT 359
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038900829.1 | 3.6e-150 | 81.48 | uncharacterized protein LOC120087893 [Benincasa hispida] | [more] |
| XP_023513005.1 | 3.2e-143 | 79.32 | uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022985735.1 | 4.2e-143 | 79.75 | uncharacterized protein LOC111483701 [Cucurbita maxima] | [more] |
| XP_022944208.1 | 3.4e-140 | 78.82 | uncharacterized protein LOC111448725 [Cucurbita moschata] >KAG7010866.1 hypothet... | [more] |
| KAG6571035.1 | 5.7e-140 | 78.70 | hypothetical protein SDJN03_29950, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1JC51 | 2.0e-143 | 79.75 | uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701... | [more] |
| A0A6J1FXU0 | 1.6e-140 | 78.82 | uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC1114487... | [more] |
| A0A6J1CWR4 | 1.8e-131 | 75.39 | uncharacterized protein LOC111015504 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
| A0A5D3BLG6 | 1.6e-116 | 65.43 | Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123... | [more] |
| A0A1S3C647 | 1.6e-116 | 65.43 | uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G16630.1 | 2.6e-82 | 49.59 | Pollen Ole e 1 allergen and extensin family protein | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| Sed0004865 | Sed0004865 | gene |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Sed0004865.1-exon | Sed0004865.1-exon-LG01:1733847..1734517 | exon |
| Sed0004865.1-exon | Sed0004865.1-exon-LG01:1735583..1736051 | exon |
| Sed0004865.1-exon | Sed0004865.1-exon-LG01:1736296..1736457 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Sed0004865.1-three_prime_utr | Sed0004865.1-three_prime_utr-LG01:1733847..1734165 | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Sed0004865.1-cds | Sed0004865.1-cds-LG01:1734166..1734517 | CDS |
| Sed0004865.1-cds | Sed0004865.1-cds-LG01:1735583..1736051 | CDS |
| Sed0004865.1-cds | Sed0004865.1-cds-LG01:1736296..1736443 | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Sed0004865.1-five_prime_utr | Sed0004865.1-five_prime_utr-LG01:1736444..1736457 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| Sed0004865.1 | Sed0004865.1-protein | polypeptide |
