Sed0004500.1 (mRNA) Chayote v1

Overview


Name	Sed0004500.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	cytochrome b5
Location	LG04: 36654184 .. 36658312 (-)
Sequence length	390
RNA-Seq Expression	Sed0004500.1
Synteny	Sed0004500.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGAGTTCAAAAGTGTATGGTTTCGATGAAGTTTCAAAGCACAATCACCACAAAGACTGCTGGCTTATCATTTCTGGATATGTATGTTTTTTCTTACCTTTAATTTGAGCCCAATTATAATATTTATTCATTCTATTCCCTAAAATAATATTAATTAATCATCTGTCTTCCTTAATACAATTTTAACACTTTATTTCTATTTCTTTTATAATTCTCTATTACCCGTTATTTCTTACTAATTATAAAATTAAAAATGTTATTCAAGTCTGCGTTACTAATTTGATATTGATGAATCAATTTAGAAGTATGAATATTTTTTTTTGTTCACATTTAAATGTTGTAGATTTAAGGTGCATGTAAGTTGGTGAGTAAGTCAAATAGTCTAATATAAGTGATATTATAAATGTTCTTTTCTAAATTATTCAATTATGTAAAATTAATTATTTGATATTTATATCTCATCGTATTTCTGCTTAAGTATGACTTCAGAACCAATTCAATGCATGACAATCATTTATTTAAAAATTAATTTCTTAAATATTTTTTATATTCAAATGTTGTACAGTAAAATTGTATGTCTTTTGAACCAATGTTTTATGTAGGTTTAACATTCATATTCATGGTATATGTGCCTAAGCATGGCCTTGGACTAGTTCAATGCATGGATAGCCACCTTTTTAGTGTTTTATATTTGAATATTTAAGATTGTCTGAATCAACTTGCATCTATTTGAACTAATATTAAGTGACTTTACATATGAAGTAAATTTGTAAAAAATTAATTCTTAAATAGATAATCACTTTAAGTTGAAGTTTTCGACTCTTAGTTCTTCAATATTCTCTTGACTATGAAATCATTTGATGATGATTATTTCATGACATAAATTAAGATGCACGTAAGCAAGTTTAAACCGTCATAGTAAATCCAAATTAAATGGGCTTAATACATTGTTTGGACCTTGGCTGGATGTACCAAACTTTCATTAACCAAGCTGTGGGATTATTTGTGATCTATGTAACTTTTGTTTAGGTGTACGACGTGACTTCTTTTTTACCTGACCATCCAGGTGGCGATGAACTTTTGCTACTCTCTGTCGGTAAGATTTAGTTATGTAGATTTTTTTAGATCAATCCAATTTATATGTCGGTCAATCTATCAAACCTGTCCAATTTCATGAATTAGAACAATTTAATCAACAAATTTTATATAAATTGGATTGATATTCCTCTTTAAAACCATTATATTTAGTCTATAAACCTGGAAAATAATAAATAAAATTGCATGATACTTAAACTTGATGCTAGACTACCCTATCTTCTTTATCACTACAAGAAATATGACTTTTCATAGCTTTTATCTATAGCATTTTAAAATTAAAGCTATTAAATGTTTGAGCATACACGCGGTTGCAGGCAATTTTTTTTTAAATGTTTAATTTAGCGCTAGAAATAAAACACAAAAATTAATTCTAAAAAAAACACTAAAAATTGGACCGCGTTCGCATTTTCTTGATGGTATGTTCTTACTGTGAAACCCTAGTCGCTTATGAAAGAAAGGCAATGACCTTAATCTGTTTCTCTCTTGAATATTTTCTTTACCTCCCCTTCTCTACTTTTTCTTTGCGCTTAAATTCTATTTCATCTTTTTTTTTTCTTTTTTTAAAGAGTAAACTTTAATGGAAGAGTTTGAGAGAAACTAATCGTTCTTGATATTATCTAGGAATTCAGAGCATGTAATTTAAGAAGCATGAGGATATTTTACTCATCTCTTGCTAGGTTTTTTAGGCTTCAGATTAAGTTATGAATTTGCTTTGTATTTCATAAATCTAACTCTTGGTTTTTATTTTTCTAATTTTTAGGCAGTGTCGATGAGCTTGTGAAAGAGTTGTTCCCCTTCAATGTAACTTGTTTTCTTTTTTCAGGGTTTGAGCTTCATTCAAAATTCAATTAAATTGAAAATATAAGGTATTTTTACATATAATCTTAAGTTCCCGTCCCTACTAAATTAGTAAAAAGAAAAAGTTGTAGCAAAATGGCCACAAAAAGGATAGTTTTATTGAATTCAAAAGGTAAAGATGGGGGAAATTATCGAGCTAAACTTTGAAAACTGAAATATTTTAAATTTGTTTGTGCTTATTGGGAGTTTGCTCTGTTTCAGGTCTTCATATTGAGTAAGAGTTTGAGATTTTAACTCTGTTCCATGTGCAAGGTGAGGAGTTTGCTTTGTATTTAGGTATTGTGCTTTTATCTTAGTTGTTTTGAGTTCTAATGTTTTATTGTGTGTTATTTTTTAGTTTAGTTTTGAAATTCTTAATTGGGATTTAAGTTTGGAGTTTGGAAGTTAATTTTTTTTTTGTTTTCAGATTTTGATTTGGTTTCTAAAATATAGGTAGGATATAGATATCCAAGTAAGAAAAAACATGTGGATAGAGAGTTACTGTAGCCTTAATTTCAAAAACAAAATTAAAAATTAAATAGTTATAAAGCGGGTCTAAACTATTCTCTAACTAGCGTAAAGCGACCCGAAAACCTGCAAAGATCATTGAAGGATATCAGATGTCGATTTAAGTTTAATCTCTAAACCCACATAAAAAAATGGATTTAGTTGGGTGAGTCTTCTATTGCTATTTGTGTTTTCTTCTTCATTTGTCTGACATTTATTTCTTTTTTTTCAGTTCTTCTTCATTTGTCTGACATTTATTTCTTTTTTTTCAGTTCTACTTTCTAGAATTTTTATTTTTCTACTTTCAATGGATGCATCTATTTTCCTTATTTGTTTTGTTGGTTAGAATTATATTTCGATTGATTTACTGTTTTTCTTTCTTCATATTTTGCAGATTTTGCTATGAGTTGATTGACTTTTGGAATAAAAGTTTTGATCATATTTTGAGGAATATAGTTGGTGCACACGAGATTGCAACACTTTGCAGCAACTTTATCAAATTAGAAAACTTATGAATTTTTTATTGTACCAGTGGCTTGTTAGAAATTATTTTGTGAATTCTTTTAAGGTTAGACACATTAATTAACTATGTTACTTTGTGATGTAATGAACTACAAGATTTCAATCATGAGATGAAAGTTGTGATATTTTATCTTCATACTATCAAATGAATGAGTGAGATATTTTTTTAATGTGAGCAGATGTAATGAAAGATTGCCATATATGTTAATTGAAAATGAAAAGATATACAAATTTGTGAATATAGAAAAAATTATAAATCTCATAATAATATGAAGAAATAAAAAAAAAAAAAAAAATTATGATCGCATTAAGAAAGTGCAATTACAAAATCATGGTAGTGTCATTTATTGGCTATAGAAACTCTTATAGCTGTTATAACCATTGCTATAATAGATTTCCATAGCAAAGTAAGTAGGCTATATTTTATAATTTTTTATAGCATTTTTTATAGCTAATGAAAAAGGTTATAAATAATCATGGACTTTTAATAACATGGGCTGTCAGGACTCTCGAAAAAAGCTATCAAAAGTCTATTATAGCACTTTCTGTTAGCTATTATATCCCATTTTTCTTGTAGTGTATGCTTGATCCTTAACAACGTGTTAATTAATCTTAAAGGTATATAATACTATTTTTAATTCAAGTTAATTCAAGTGGAGCTATGTTCATGAACCAACCAACCGATGATTATAAATTTATAACACGACATTTATAATTTGAATTTGGTAGTTCAAAATTATCAAATTTTGGTACACCAATAATTGTTAGATGTTTTTTTTTGAATTGACAAAGAATAATAAGTTAAATTTTGAACCACTTGAACTTGTAAAATAAATGAACAAAATTGTTTTTATTTTGGTGATACATTTCATTAATTTGTAAGTTCTAGAAAGTGTTCATATATAATAGATTTGAATTGTCAGGAAAAGATGCAACGTTTGACTTTAAAAGTGTCGGACACAGTGAATCAGCTGAAGAGAGGATGAAAAAGTATTGCAAAGGTAAGATCGACATGTCGACTCTCCCAGGAAACCAAGCTTATGTCGAAACAGCTCCATACCAAAAGACTCCTGCTCTGTTTTCCTTTTCCCCCTTGCATCTCCTAATCCCCCTTTTGCTCTTCGCCTTTGCTTTTGCATTTCCTTACTTTAAACTTTAA

mRNA sequence

ATGGATTCGAGTTCAAAAGTGTATGGTTTCGATGAAGTTTCAAAGCACAATCACCACAAAGACTGCTGGCTTATCATTTCTGGATATGTGTACGACGTGACTTCTTTTTTACCTGACCATCCAGGTGGCGATGAACTTTTGCTACTCTCTGTCGGAAAAGATGCAACGTTTGACTTTAAAAGTGTCGGACACAGTGAATCAGCTGAAGAGAGGATGAAAAAGTATTGCAAAGGTAAGATCGACATGTCGACTCTCCCAGGAAACCAAGCTTATGTCGAAACAGCTCCATACCAAAAGACTCCTGCTCTGTTTTCCTTTTCCCCCTTGCATCTCCTAATCCCCCTTTTGCTCTTCGCCTTTGCTTTTGCATTTCCTTACTTTAAACTTTAA

Coding sequence (CDS)

ATGGATTCGAGTTCAAAAGTGTATGGTTTCGATGAAGTTTCAAAGCACAATCACCACAAAGACTGCTGGCTTATCATTTCTGGATATGTGTACGACGTGACTTCTTTTTTACCTGACCATCCAGGTGGCGATGAACTTTTGCTACTCTCTGTCGGAAAAGATGCAACGTTTGACTTTAAAAGTGTCGGACACAGTGAATCAGCTGAAGAGAGGATGAAAAAGTATTGCAAAGGTAAGATCGACATGTCGACTCTCCCAGGAAACCAAGCTTATGTCGAAACAGCTCCATACCAAAAGACTCCTGCTCTGTTTTCCTTTTCCCCCTTGCATCTCCTAATCCCCCTTTTGCTCTTCGCCTTTGCTTTTGCATTTCCTTACTTTAAACTTTAA

Protein sequence

MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAFAFAFPYFKL

Homology

[Close]

BLAST of Sed0004500.1 vs. NCBI nr
Match: XP_038875836.1 (cytochrome b5-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 6.0e-56
Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDSSSK+Y FDEVSKHNHH+DCWLIISGYVYDVT+FLPDHPGG+ELLLL+VG+DATFDFK
Sbjct: 3   MDSSSKLYSFDEVSKHNHHRDCWLIISGYVYDVTAFLPDHPGGEELLLLAVGRDATFDFK 62

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE A+E+MKKY  GKIDMSTLP  Q YVET PYQ TP+LFSFSP+HLLIP+LL A 
Sbjct: 63  SVGHSELAQEKMKKYRIGKIDMSTLPRKQQYVETTPYQPTPSLFSFSPIHLLIPILLLAL 122

Query: 121 AFAFPYFKL 130
           AFAFPYFKL
Sbjct: 123 AFAFPYFKL 131

[Close]

BLAST of Sed0004500.1 vs. NCBI nr
Match: XP_004140502.1 (cytochrome b5 [Cucumis sativus] >KGN46545.1 hypothetical protein Csa_005454 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53
Identity = 105/129 (81.40%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SKVY FDEV+KHN  KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFK
Sbjct: 1   MDSNSKVYSFDEVAKHNQQKDCWLIISGYVYDVTSFLPDHPGGDELLLLAVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE A E+MK Y  GKIDMSTLP  Q YVE+APYQ+TP+LFSFSP+HLL+P+LL A 
Sbjct: 61  SVGHSELAHEKMKMYQIGKIDMSTLPEKQKYVESAPYQRTPSLFSFSPIHLLLPILLLAL 120

Query: 121 AFAFPYFKL 130
           AFAFPYFKL
Sbjct: 121 AFAFPYFKL 129

[Close]

BLAST of Sed0004500.1 vs. NCBI nr
Match: XP_008459741.1 (PREDICTED: cytochrome b5 [Cucumis melo])

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53
Identity = 104/129 (80.62%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SKVY FDEV+KHNH KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFK
Sbjct: 1   MDSNSKVYSFDEVAKHNHQKDCWLIISGYVYDVTSFLPDHPGGDELLLLAVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE A+E+MK Y  GKIDMSTLP  Q YVE+ PYQ TP+LFSFSP+H+L+P+LL A 
Sbjct: 61  SVGHSELAQEKMKMYRIGKIDMSTLPKKQNYVESTPYQPTPSLFSFSPIHVLLPILLLAL 120

Query: 121 AFAFPYFKL 130
           AFAFPYFKL
Sbjct: 121 AFAFPYFKL 129

[Close]

BLAST of Sed0004500.1 vs. NCBI nr
Match: XP_022964486.1 (cytochrome b5-like [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 7.1e-49
Identity = 98/129 (75.97%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SKVY FDEV+KHNH KDCWLIISG+VYDVTS+LPDHPGG ELL+L+V KDATFDFK
Sbjct: 1   MDSNSKVYTFDEVAKHNHEKDCWLIISGFVYDVTSYLPDHPGGGELLVLAVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSESA+ERMKKY  GKID  TLP  Q +VET P++ TP+L SFSPLH+LIPLLL   
Sbjct: 61  SVGHSESAKERMKKYQIGKIDPLTLPTEQKHVETTPHKPTPSLLSFSPLHVLIPLLLLVL 120

Query: 121 AFAFPYFKL 130
           AFAFPY K+
Sbjct: 121 AFAFPYLKI 129

[Close]

BLAST of Sed0004500.1 vs. NCBI nr
Match: XP_023000205.1 (cytochrome b5-like [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 9.2e-49
Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SK+Y F+EV+KHNH KDCWLIISGYVYDVTS+LPDHPGG ELL+L+V KDATFDFK
Sbjct: 1   MDSNSKIYTFNEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGSELLVLTVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE+A E MKKY  GKID  TLP  Q YVET PY+ TP+L SFSPLH+LIPLLL   
Sbjct: 61  SVGHSETAREMMKKYQIGKIDPLTLPTEQKYVETTPYKPTPSLLSFSPLHVLIPLLLLVL 120

Query: 121 AFAFPYFKL 130
           AFAFPY K+
Sbjct: 121 AFAFPYLKI 129

[Close]

BLAST of Sed0004500.1 vs. ExPASy Swiss-Prot
Match: P40934 (Cytochrome b5 OS=Brassica oleracea var. botrytis OX=3715 GN=CYB5 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.0e-31
Identity = 71/127 (55.91%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M S  KV GF+EVS+HN  KDCWLIISG VYDVT F+ DHPGGDE+LL S GKDAT DF+
Sbjct: 1   MASEKKVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ------KTPALFSFSPLHLLIP 120
            VGHS++A + M+KY  G+ID ST+P  + YV  AP Q      KTP  F    L  L+P
Sbjct: 61  DVGHSDTARDMMEKYYIGEIDSSTVPATRTYV--APVQPAYNQDKTPE-FMIKILQFLVP 120

Query: 121 LLLFAFA 122
           +L+   A
Sbjct: 121 ILILGLA 124

[Close]

BLAST of Sed0004500.1 vs. ExPASy Swiss-Prot
Match: Q42342 (Cytochrome b5 isoform E OS=Arabidopsis thaliana OX=3702 GN=CYTB5-E PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-29
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M S  KV  F+EVSKHN  KDCWLIISG VYDVT F+ DHPGGDE+LL S GKDAT DF+
Sbjct: 1   MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ------KTPALFSFSPLHLLIP 120
            VGHS++A + M KY  G+ID S++P  + YV  AP Q      KTP  F    L  L+P
Sbjct: 61  DVGHSDTARDMMDKYFIGEIDSSSVPATRTYV--APQQPAYNQDKTPE-FIIKILQFLVP 120

Query: 121 LLLFAFAFAFPYF 128
           +L+   A    ++
Sbjct: 121 ILILGLALVVRHY 130

[Close]

BLAST of Sed0004500.1 vs. ExPASy Swiss-Prot
Match: P49098 (Cytochrome b5 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 61/130 (46.92%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M   +KV+   EVS+HN+ KDCWL+ISG VYDVT FL DHPGGDE+LL + GKDAT DF+
Sbjct: 1   MGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--QKTPALFSFSPLHLLIPLLL 120
            VGHS SA   + +Y  G ID +T+P    Y     P+  Q   + F    L  L+PL++
Sbjct: 61  DVGHSSSARAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDKTSEFVVKLLQFLVPLII 120

Query: 121 FAFAFAFPYF 128
              AF   ++
Sbjct: 121 LGVAFGIRFY 130

[Close]

BLAST of Sed0004500.1 vs. ExPASy Swiss-Prot
Match: O48845 (Cytochrome b5 isoform B OS=Arabidopsis thaliana OX=3702 GN=CYTB5-B PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.7e-25
Identity = 58/124 (46.77%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M   +K++   EVS+HN   DCW++I+G VY+VT FL DHPGGD++LL S GKDAT DF+
Sbjct: 1   MGDEAKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--QKTPALFSFSPLHLLIPLLL 120
            VGHSESA E M++Y  G+ID +T+P    Y     P+  Q   + F    L  L+PL +
Sbjct: 61  DVGHSESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAI 120

Query: 121 FAFA 122
              A
Sbjct: 121 LGLA 124

[Close]

BLAST of Sed0004500.1 vs. ExPASy Swiss-Prot
Match: P49100 (Cytochrome b5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 5.7e-25
Identity = 61/126 (48.41%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 2   DSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKS 61
           + + KVY  +EV+KHN   DCWLII G VY+V+ FL DHPGGD++LL S GKDAT DF+ 
Sbjct: 3   NDNKKVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFED 62

Query: 62  VGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAP----YQKTPALFSFSPLHLLIPLLL 121
           VGHS +A   M +Y  G ID ST+P    YV          KTP  F    L  L+PL +
Sbjct: 63  VGHSTTARAMMDEYYVGDIDTSTIPARTKYVPPKQPHYNQDKTPE-FIIKILQFLVPLAI 122

Query: 122 FAFAFA 124
              A A
Sbjct: 123 LGLAVA 127

[Close]

BLAST of Sed0004500.1 vs. ExPASy TrEMBL
Match: A0A0A0KA20 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G107940 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.9e-54
Identity = 105/129 (81.40%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SKVY FDEV+KHN  KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFK
Sbjct: 1   MDSNSKVYSFDEVAKHNQQKDCWLIISGYVYDVTSFLPDHPGGDELLLLAVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE A E+MK Y  GKIDMSTLP  Q YVE+APYQ+TP+LFSFSP+HLL+P+LL A 
Sbjct: 61  SVGHSELAHEKMKMYQIGKIDMSTLPEKQKYVESAPYQRTPSLFSFSPIHLLLPILLLAL 120

Query: 121 AFAFPYFKL 130
           AFAFPYFKL
Sbjct: 121 AFAFPYFKL 129

[Close]

BLAST of Sed0004500.1 vs. ExPASy TrEMBL
Match: A0A1S3CAE5 (cytochrome b5 OS=Cucumis melo OX=3656 GN=LOC103498784 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 104/129 (80.62%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SKVY FDEV+KHNH KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFK
Sbjct: 1   MDSNSKVYSFDEVAKHNHQKDCWLIISGYVYDVTSFLPDHPGGDELLLLAVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE A+E+MK Y  GKIDMSTLP  Q YVE+ PYQ TP+LFSFSP+H+L+P+LL A 
Sbjct: 61  SVGHSELAQEKMKMYRIGKIDMSTLPKKQNYVESTPYQPTPSLFSFSPIHVLLPILLLAL 120

Query: 121 AFAFPYFKL 130
           AFAFPYFKL
Sbjct: 121 AFAFPYFKL 129

[Close]

BLAST of Sed0004500.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ10 (cytochrome b5-like OS=Cucurbita moschata OX=3662 GN=LOC111464496 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.4e-49
Identity = 98/129 (75.97%), Postives = 111/129 (86.05%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SKVY FDEV+KHNH KDCWLIISG+VYDVTS+LPDHPGG ELL+L+V KDATFDFK
Sbjct: 1   MDSNSKVYTFDEVAKHNHEKDCWLIISGFVYDVTSYLPDHPGGGELLVLAVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSESA+ERMKKY  GKID  TLP  Q +VET P++ TP+L SFSPLH+LIPLLL   
Sbjct: 61  SVGHSESAKERMKKYQIGKIDPLTLPTEQKHVETTPHKPTPSLLSFSPLHVLIPLLLLVL 120

Query: 121 AFAFPYFKL 130
           AFAFPY K+
Sbjct: 121 AFAFPYLKI 129

[Close]

BLAST of Sed0004500.1 vs. ExPASy TrEMBL
Match: A0A6J1KHQ2 (cytochrome b5-like OS=Cucurbita maxima OX=3661 GN=LOC111494495 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.5e-49
Identity = 97/129 (75.19%), Postives = 109/129 (84.50%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           MDS+SK+Y F+EV+KHNH KDCWLIISGYVYDVTS+LPDHPGG ELL+L+V KDATFDFK
Sbjct: 1   MDSNSKIYTFNEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGSELLVLTVEKDATFDFK 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLHLLIPLLLFAF 120
           SVGHSE+A E MKKY  GKID  TLP  Q YVET PY+ TP+L SFSPLH+LIPLLL   
Sbjct: 61  SVGHSETAREMMKKYQIGKIDPLTLPTEQKYVETTPYKPTPSLLSFSPLHVLIPLLLLVL 120

Query: 121 AFAFPYFKL 130
           AFAFPY K+
Sbjct: 121 AFAFPYLKI 129

[Close]

BLAST of Sed0004500.1 vs. ExPASy TrEMBL
Match: M5X125 (Cytochrome b5 heme-binding domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_2G194100 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.5e-31
Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M S S+VY FDEV+KHNH KDCW+IISG VYDVT FL DHPGGDE+LLL+V KDAT DF 
Sbjct: 1   MASDSQVYHFDEVAKHNHKKDCWIIISGKVYDVTPFLEDHPGGDEVLLLAVEKDATDDFN 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAY---VETAPYQKTPALFSFSPLHLLIPLLL 120
            VGHS+SA+E+M+K+  GK+D ST+P   +Y    +T P     + F    L  L+PLL+
Sbjct: 61  DVGHSDSAKEQMEKFYVGKVDTSTIPEQPSYKLPAQTTPPSGQSSGFVVKLLQFLLPLLI 120

Query: 121 FAFAFAFPYF 128
              AFA  Y+
Sbjct: 121 LGAAFALQYY 130

[Close]

BLAST of Sed0004500.1 vs. TAIR 10
Match: AT5G53560.1 (cytochrome B5 isoform E )

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-30
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M S  KV  F+EVSKHN  KDCWLIISG VYDVT F+ DHPGGDE+LL S GKDAT DF+
Sbjct: 1   MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ------KTPALFSFSPLHLLIP 120
            VGHS++A + M KY  G+ID S++P  + YV  AP Q      KTP  F    L  L+P
Sbjct: 61  DVGHSDTARDMMDKYFIGEIDSSSVPATRTYV--APQQPAYNQDKTPE-FIIKILQFLVP 120

Query: 121 LLLFAFAFAFPYF 128
           +L+   A    ++
Sbjct: 121 ILILGLALVVRHY 130

[Close]

BLAST of Sed0004500.1 vs. TAIR 10
Match: AT2G32720.1 (cytochrome B5 isoform B )

HSP 1 Score: 115.2 bits (287), Expect = 4.0e-26
Identity = 58/124 (46.77%), Postives = 78/124 (62.90%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M   +K++   EVS+HN   DCW++I+G VY+VT FL DHPGGD++LL S GKDAT DF+
Sbjct: 1   MGDEAKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--QKTPALFSFSPLHLLIPLLL 120
            VGHSESA E M++Y  G+ID +T+P    Y     P+  Q   + F    L  L+PL +
Sbjct: 61  DVGHSESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAI 120

Query: 121 FAFA 122
              A
Sbjct: 121 LGLA 124

[Close]

BLAST of Sed0004500.1 vs. TAIR 10
Match: AT5G48810.1 (cytochrome B5 isoform D )

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26
Identity = 58/132 (43.94%), Postives = 78/132 (59.09%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M    KV+   EVS+H+  KDCW++I G VYDVT FL DHPGGDE++L S GKDAT DF+
Sbjct: 1   MGGDGKVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-----ETAPYQKTPALFSFSPLHLLIPL 120
            VGHS +A+  + +Y  G ID +T+P    +V     +    Q   + F    L  L+PL
Sbjct: 61  DVGHSSTAKAMLDEYYVGDIDTATVPVKAKFVPPTSTKAVATQDKSSDFVIKLLQFLVPL 120

Query: 121 LLFAFAFAFPYF 128
           L+   AF   Y+
Sbjct: 121 LILGLAFGIRYY 132

[Close]

BLAST of Sed0004500.1 vs. TAIR 10
Match: AT2G46650.1 (cytochrome B5 isoform C )

HSP 1 Score: 110.9 bits (276), Expect = 7.6e-25
Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 5   SKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGH 64
           + +  F +V+KH    DCW++I G VYD+++F+ +HPGGD +LL   GKDA+ DF+ V H
Sbjct: 2   ANLISFHDVAKHKCKNDCWILIHGKVYDISTFMDEHPGGDNVLLAVTGKDASIDFEDVNH 61

Query: 65  SESAEERMKKYCKGKIDMSTLPGNQAYV-----ETAPYQKTPALFSFSPLHLLIPLLLFA 124
           S+ A+E MKKYC G +D ST+P  Q Y+     E+   + T        L  LIPLL+  
Sbjct: 62  SKDAKELMKKYCIGDVDQSTVPVTQQYIPPWEKESTAAETTKEESGKKLLIYLIPLLILG 121

Query: 125 FAFAFPYF 128
            AFA  ++
Sbjct: 122 VAFALRFY 129

[Close]

BLAST of Sed0004500.1 vs. TAIR 10
Match: AT1G26340.1 (cytochrome B5 isoform A )

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-23
Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 1   MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFK 60
           M + +K+Y  +E + HN   DCW++I G VYDV+S++ +HPGGD++LL   GKDAT DF+
Sbjct: 1   MPTLTKLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFE 60

Query: 61  SVGHSESAEERMKKYCKGKIDMSTL---PGNQAYVETAPYQKTPALFSFSPLHLLIPLLL 120
             GHS+ A E M+KY  G++D S+L   P  + Y +  P      LF  +  + ++P+ +
Sbjct: 61  DAGHSKDARELMEKYFIGELDESSLPEIPELKIYKKDQPQDSVQKLFDLTKQYWVVPVSI 120

Query: 121 FAFAFA 124
              + A
Sbjct: 121 ITISVA 126

The following BLAST results are available for this feature:

BLAST of Sed0004500.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875836.1	6.0e-56	82.95	cytochrome b5-like [Benincasa hispida]	[more]
XP_004140502.1	1.6e-53	81.40	cytochrome b5 [Cucumis sativus] >KGN46545.1 hypothetical protein Csa_005454 [Cuc...	[more]
XP_008459741.1	2.1e-53	80.62	PREDICTED: cytochrome b5 [Cucumis melo]	[more]
XP_022964486.1	7.1e-49	75.97	cytochrome b5-like [Cucurbita moschata]	[more]
XP_023000205.1	9.2e-49	75.19	cytochrome b5-like [Cucurbita maxima]	[more]

BLAST of Sed0004500.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P40934	9.0e-31	55.91	Cytochrome b5 OS=Brassica oleracea var. botrytis OX=3715 GN=CYB5 PE=1 SV=1	[more]
Q42342	2.2e-29	52.63	Cytochrome b5 isoform E OS=Arabidopsis thaliana OX=3702 GN=CYTB5-E PE=1 SV=2	[more]
P49098	1.1e-25	46.92	Cytochrome b5 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
O48845	5.7e-25	46.77	Cytochrome b5 isoform B OS=Arabidopsis thaliana OX=3702 GN=CYTB5-B PE=1 SV=1	[more]
P49100	5.7e-25	48.41	Cytochrome b5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0108800 PE=2 SV=2	[more]

BLAST of Sed0004500.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA20	7.9e-54	81.40	Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 ...	[more]
A0A1S3CAE5	1.0e-53	80.62	cytochrome b5 OS=Cucumis melo OX=3656 GN=LOC103498784 PE=3 SV=1	[more]
A0A6J1HJ10	3.4e-49	75.97	cytochrome b5-like OS=Cucurbita moschata OX=3662 GN=LOC111464496 PE=3 SV=1	[more]
A0A6J1KHQ2	4.5e-49	75.19	cytochrome b5-like OS=Cucurbita maxima OX=3661 GN=LOC111494495 PE=3 SV=1	[more]
M5X125	2.5e-31	56.15	Cytochrome b5 heme-binding domain-containing protein OS=Prunus persica OX=3760 G...	[more]

BLAST of Sed0004500.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53560.1	1.6e-30	52.63	cytochrome B5 isoform E	[more]
AT2G32720.1	4.0e-26	46.77	cytochrome B5 isoform B	[more]
AT5G48810.1	5.3e-26	43.94	cytochrome B5 isoform D	[more]
AT2G46650.1	7.6e-25	42.19	cytochrome B5 isoform C	[more]
AT1G26340.1	2.4e-23	38.89	cytochrome B5 isoform A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001199	Cytochrome b5-like heme/steroid binding domain	PRINTS	PR00363	CYTOCHROMEB5	coord: 68..80 score: 27.39 coord: 40..54 score: 50.61 coord: 55..62 score: 35.8 coord: 30..40 score: 64.74
IPR001199	Cytochrome b5-like heme/steroid binding domain	SMART	SM01117	Cyt_b5_2	coord: 8..81 e-value: 1.7E-27 score: 107.3
IPR001199	Cytochrome b5-like heme/steroid binding domain	PFAM	PF00173	Cyt-b5	coord: 11..80 e-value: 1.2E-23 score: 83.1
IPR001199	Cytochrome b5-like heme/steroid binding domain	PROSITE	PS50255	CYTOCHROME_B5_2	coord: 5..81 score: 26.320101
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	GENE3D	3.10.120.10		coord: 1..85 e-value: 4.4E-30 score: 105.5
IPR036400	Cytochrome b5-like heme/steroid binding domain superfamily	SUPERFAMILY	55856	Cytochrome b5-like heme/steroid binding domain	coord: 4..84
None	No IPR available	PANTHER	PTHR19359	CYTOCHROME B5	coord: 1..128
None	No IPR available	PANTHER	PTHR19359:SF81	SUBFAMILY NOT NAMED	coord: 1..128
IPR018506	Cytochrome b5, heme-binding site	PROSITE	PS00191	CYTOCHROME_B5_1	coord: 36..43

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0004500	Sed0004500	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004500.1-exon	Sed0004500.1-exon-LG04:36654184..36654419	exon
Sed0004500.1-exon	Sed0004500.1-exon-LG04:36657211..36657277	exon
Sed0004500.1-exon	Sed0004500.1-exon-LG04:36658226..36658312	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004500.1-cds	Sed0004500.1-cds-LG04:36654184..36654419	CDS
Sed0004500.1-cds	Sed0004500.1-cds-LG04:36657211..36657277	CDS
Sed0004500.1-cds	Sed0004500.1-cds-LG04:36658226..36658312	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0004500.1	Sed0004500.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0046872	metal ion binding