Homology
BLAST of Sed0004335.4 vs. NCBI nr
Match:
XP_038895622.1 (heterogeneous nuclear ribonucleoprotein Q isoform X1 [Benincasa hispida])
HSP 1 Score: 1122.1 bits (2901), Expect = 0.0e+00
Identity = 599/728 (82.28%), Postives = 652/728 (89.56%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRGA+SAG K+GGRVTRGTPKKQD P E EV E TVKVEEV V E
Sbjct: 1 MPPRTVKRGAASAGPKKGGRVTRGTPKKQDQPAEREVAEETVKVEEVSV---------VE 60
Query: 61 VETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQAVL 120
VETKEL E+V V +KSPVVEDKPVIQNKP V+E+K+P++IDVE+VEP ++ SDSK +V
Sbjct: 61 VETKELREEVTVQDKSPVVEDKPVIQNKPVVVEEKQPISIDVEDVEPSHEVRSDSKPSVP 120
Query: 121 SKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAEDN 180
KK EEVKDEE+ KDERLDLEDNDPESEPEE E+DEKE E+ED Q +V EG+ EDN
Sbjct: 121 PKKEEEVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGDPEDN 180
Query: 181 VGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEF 240
VG+EEG DM E+DVED QEDL+GEEDDQQA EDH+HA MVD DEDEH +VVKERRKRKEF
Sbjct: 181 VGDEEG-DMVEEDVEDAQEDLDGEEDDQQAGEDHDHAGMVDADEDEHHEVVKERRKRKEF 240
Query: 241 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
EVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE
Sbjct: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
Query: 301 LKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNE 360
LKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSNNE
Sbjct: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
Query: 361 GSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTVF 420
GSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKTVF
Sbjct: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
Query: 421 VDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINN 480
VDSLPASWDE+FV+GLLKKYGE+EKIELARNMPSAKRKDFGFVTFD+HDAAVSCAK+INN
Sbjct: 421 VDSLPASWDEEFVKGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
Query: 481 TELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPVRG 540
+ELGEGDNKAKVRARLSRPLQRGKGK+A RADYWP R T GR+VRGSWGRPAPRS+PVRG
Sbjct: 481 SELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTT-GRAVRGSWGRPAPRSIPVRG 540
Query: 541 LRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKREY 600
+R VGSH PPVS+KR G VR+RRPVI++P RGR +A RSYDRGPPV SYSKSS+KREY
Sbjct: 541 VRGVGSHLPPVSIKRPGGVRDRRPVIAVPPRGRPVAAVTRSYDRGPPVTSYSKSSMKREY 600
Query: 601 GRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGYGR 660
GRR ELHPSRSR+LVDY SRVVPERN SYRD+Y SRA AF DPPRREAPRRAYVDDGYGR
Sbjct: 601 GRREELHPSRSRMLVDYASRVVPERNPSYRDDYASRAVAFSDPPRREAPRRAYVDDGYGR 660
Query: 661 RFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQYG 720
RFERPPPPSYRDVRARDYDA IGSKRPYSS+SDVPPAYAD+ VRQSRSRLDYDY A
Sbjct: 661 RFERPPPPSYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQ 717
Query: 721 HGDAYDSR 724
+GDAYDSR
Sbjct: 721 YGDAYDSR 717
BLAST of Sed0004335.4 vs. NCBI nr
Match:
XP_022146943.1 (nucleolin [Momordica charantia] >XP_022146944.1 nucleolin [Momordica charantia] >XP_022146945.1 nucleolin [Momordica charantia])
HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 606/730 (83.01%), Postives = 653/730 (89.45%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRGA+SAGSKRGGRVTRGTPKKQD P E EV E TVKVEEV V E
Sbjct: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDPPXEREVPEETVKVEEVSV---------VE 60
Query: 61 VETKELHEDVPV--LEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQA 120
VETKEL E+V V EKSPVVEDKPVIQ+KP V+E+K+P+AIDVEEVEP + SDSKQ+
Sbjct: 61 VETKELREEVTVKEKEKSPVVEDKPVIQSKPVVVEEKQPIAIDVEEVEPPHDVRSDSKQS 120
Query: 121 VLSKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAE 180
V KK EEVKD+E+ KDERLDLEDNDPESEPEE EFDEKE E+ED Q +V +GE E
Sbjct: 121 VPPKKEEEVKDDEYGKDERLDLEDNDPESEPEEYGGFEFDEKEIEQEDVQEVVDGDGEPE 180
Query: 181 DNVGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRK 240
DNVG+EE GE+DVEDVQED EGEEDDQQAAEDHEHA MVD DE+EH +V KERRKRK
Sbjct: 181 DNVGDEE----GEEDVEDVQEDPEGEEDDQQAAEDHEHAGMVDADEEEHHEVFKERRKRK 240
Query: 241 EFEVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
EFEVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV
Sbjct: 241 EFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
Query: 301 SELKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSN 360
SELKNPVINGK+CGVTPSQDSDTLFLGNI K+W KD LKEKLKHYGVDNVEDLTL+EDSN
Sbjct: 301 SELKNPVINGKQCGVTPSQDSDTLFLGNINKTWKKDALKEKLKHYGVDNVEDLTLVEDSN 360
Query: 361 NEGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKT 420
NEGSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKT
Sbjct: 361 NEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 420
Query: 421 VFVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNI 480
VFVDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFDSHDAAVSCAK+I
Sbjct: 421 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKSI 480
Query: 481 NNTELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPV 540
NN+ELGEGDNKAKVRARLSRPLQRGKGK+AGRAD+WP R T GR+VRGSWGRPAPRSL V
Sbjct: 481 NNSELGEGDNKAKVRARLSRPLQRGKGKHAGRADFWPGR-TSGRAVRGSWGRPAPRSLSV 540
Query: 541 RGLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKR 600
RG+R VGSHFPPVSVKR G VR+RRPVI++P RGRQIAP ARSYDRGPPVASYSKS+LKR
Sbjct: 541 RGVRGVGSHFPPVSVKRPGGVRDRRPVIAVPVRGRQIAPVARSYDRGPPVASYSKSNLKR 600
Query: 601 EYGRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGY 660
+YGRR ELHPSRSRVLVDY SRVVPERN YRDEY SRA F DPPRR+APRRAY+DDGY
Sbjct: 601 DYGRREELHPSRSRVLVDYASRVVPERNPPYRDEYASRAPGFSDPPRRDAPRRAYLDDGY 660
Query: 661 GRRFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQ 720
GRRFERPPPPSYRDVRARDYDA IGSKRPYSS+SDVPPAYAD+ VRQSRSRL+Y+Y A
Sbjct: 661 GRRFERPPPPSYRDVRARDYDAIIGSKRPYSSLSDVPPAYADAGVRQSRSRLEYEYGAGA 716
Query: 721 YGHGDAYDSR 724
+GDAYDSR
Sbjct: 721 SQYGDAYDSR 716
BLAST of Sed0004335.4 vs. NCBI nr
Match:
XP_008438311.1 (PREDICTED: nucleolin [Cucumis melo])
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 600/728 (82.42%), Postives = 647/728 (88.87%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRG++SAG+KRGGR TRGTPKKQD P E EV E T KVEEV V E
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVAEETAKVEEVSV---------VE 60
Query: 61 VETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQAVL 120
VETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+P+A+DV EVE ++ SDSKQ+V
Sbjct: 61 VETKELREEVAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSHEVRSDSKQSVP 120
Query: 121 SKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAEDN 180
KK EEVKDEE+ KDERLDLEDNDPESEPEE E+DEKE E+ED Q +V EGE EDN
Sbjct: 121 PKKEEEVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDN 180
Query: 181 VGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEF 240
VG+EEG DM E+DVED QEDLEGE+DDQQ EDHEHA MVD DEDEH +VVKERRKRKEF
Sbjct: 181 VGDEEG-DMVEEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEF 240
Query: 241 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
EVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE
Sbjct: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
Query: 301 LKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNE 360
LKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSNNE
Sbjct: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
Query: 361 GSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTVF 420
GSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKTVF
Sbjct: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
Query: 421 VDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINN 480
VDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFD+HDAAVSCAK+INN
Sbjct: 421 VDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
Query: 481 TELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPVRG 540
+ELGEGD+KAKVRARLSRPLQRGKGK+A RADYWP R T GR VRGSW RPAPRS+P+RG
Sbjct: 481 SELGEGDSKAKVRARLSRPLQRGKGKHASRADYWPGRTT-GR-VRGSWARPAPRSIPIRG 540
Query: 541 LRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKREY 600
+R VGSH PPVSVKR VR+RRPVI++P RGR +A ARSYDRGPPVASYSKSSLKREY
Sbjct: 541 VRGVGSHLPPVSVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKREY 600
Query: 601 GRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGYGR 660
GRR ELHPSRSR+LVDY SRVVPERN SYRDEY SRAAAF DPPRR+APRRAYVDDGY R
Sbjct: 601 GRREELHPSRSRMLVDYASRVVPERNPSYRDEYASRAAAFSDPPRRDAPRRAYVDDGYSR 660
Query: 661 RFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQYG 720
RFERPPPPSYRDVRARDYDA IGSKRPYSSMSDVPPAYAD+ VRQSRSRLDYDY
Sbjct: 661 RFERPPPPSYRDVRARDYDALIGSKRPYSSMSDVPPAYADAGVRQSRSRLDYDYGTGASQ 716
Query: 721 HGDAYDSR 724
+GDAYDSR
Sbjct: 721 YGDAYDSR 716
BLAST of Sed0004335.4 vs. NCBI nr
Match:
XP_004133977.1 (nucleolin [Cucumis sativus] >KGN56704.1 hypothetical protein Csa_010835 [Cucumis sativus])
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 599/728 (82.28%), Postives = 647/728 (88.87%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRG++SAG+KRGGR TRGTPKKQD P E EVVE T KVEEV V E
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSV---------VE 60
Query: 61 VETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQAVL 120
VETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+P+A+DV EVE + SDSKQ+V
Sbjct: 61 VETKELREEVAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSREVRSDSKQSVP 120
Query: 121 SKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAEDN 180
KK EEVKDEE+ KDERLDLEDNDPESEP+E E+DEKE E+ED Q +V EGE EDN
Sbjct: 121 PKKEEEVKDEEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGEPEDN 180
Query: 181 VGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEF 240
VG+EEG DM E+DVED QEDLEGE+DDQQ EDHEHA MVD DEDEH +VVKERRKRKEF
Sbjct: 181 VGDEEG-DMVEEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEF 240
Query: 241 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
EVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE
Sbjct: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
Query: 301 LKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNE 360
LKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSNNE
Sbjct: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
Query: 361 GSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTVF 420
GSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKTVF
Sbjct: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
Query: 421 VDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINN 480
VDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFD+HDAAVSCAK+INN
Sbjct: 421 VDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
Query: 481 TELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPVRG 540
+ELGEGDNKAKVRARLSRPLQRGKGK+A R DYWP R T GR VRGSW RPAPRS+P+RG
Sbjct: 481 SELGEGDNKAKVRARLSRPLQRGKGKHASRTDYWPGRTT-GR-VRGSWTRPAPRSIPIRG 540
Query: 541 LRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKREY 600
+R VGSH PPVSVKR VR+RRPVI++P RGR +A ARSYDRGPPVASYSKSSLKR+Y
Sbjct: 541 VRGVGSHLPPVSVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKRDY 600
Query: 601 GRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGYGR 660
GRR ELHPSRSR+LVDY SRVVPERN SYRD+Y SRAAAF DPPRR+APRRAYVDDGY R
Sbjct: 601 GRREELHPSRSRMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGYSR 660
Query: 661 RFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQYG 720
RFERPPPPSYRDVRARDYDA IGSKRPYSSMSDVPPAYAD+ VRQSRSRLDYDY A
Sbjct: 661 RFERPPPPSYRDVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAGASQ 716
Query: 721 HGDAYDSR 724
+GDAYDSR
Sbjct: 721 YGDAYDSR 716
BLAST of Sed0004335.4 vs. NCBI nr
Match:
KAG7018879.1 (Heterogeneous nuclear ribonucleoprotein Q [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1101.3 bits (2847), Expect = 0.0e+00
Identity = 596/730 (81.64%), Postives = 644/730 (88.22%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPP---EPEVVEATVKVEEVEVETKTVKVE 60
MPPRTVKRG +SAGSKRGGRVTRGTPKKQ+ E EVVE KVEEV V V+VE
Sbjct: 1 MPPRTVKRGGASAGSKRGGRVTRGTPKKQEKQEPVVEREVVEEVAKVEEVSV----VEVE 60
Query: 61 ESEVETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQ 120
ETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+P+AIDVEEVEP ++ S
Sbjct: 61 ----ETKELREEVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSKQSA 120
Query: 121 AVLSKKEEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAE 180
+EEVKDEE+ KDERLDLEDNDPESEPEE EFDEKE E+E Q +V EGE
Sbjct: 121 PPKKDEEEVKDEEYGKDERLDLEDNDPESEPEEDAGFEFDEKEIEQEAVQEVVDGEGEPV 180
Query: 181 DNVGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRK 240
DNVG EEG DMG+DDV+D QEDLEGE+DDQQA ED +HA MVDVDEDEH +VVKERRKRK
Sbjct: 181 DNVGHEEG-DMGDDDVDDAQEDLEGEDDDQQAGEDRDHAGMVDVDEDEHHEVVKERRKRK 240
Query: 241 EFEVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
EFEVF+GGLDKDVKEEDLK+VFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV
Sbjct: 241 EFEVFVGGLDKDVKEEDLKEVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
Query: 301 SELKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSN 360
SELKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSN
Sbjct: 301 SELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDILKEKLKHYGVDNVEDLTLVEDSN 360
Query: 361 NEGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKT 420
NEGSNRGF+FLEFASRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKT
Sbjct: 361 NEGSNRGFAFLEFASRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 420
Query: 421 VFVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNI 480
VFVDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFD+HDAAVSCAK+I
Sbjct: 421 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 480
Query: 481 NNTELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPV 540
NN+ELGEGDNKAKVRARLSRPLQRGKGK+ R DYWP RAT GR+VRGSWG+P PRSLPV
Sbjct: 481 NNSELGEGDNKAKVRARLSRPLQRGKGKHVSRTDYWPGRAT-GRAVRGSWGQPGPRSLPV 540
Query: 541 RGLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKR 600
RG+R VGSH PPV VKR G +R+RRPV +MP RGR IAP ARSYDRGPPVASYSKSSLKR
Sbjct: 541 RGVRGVGSHLPPVGVKRPGGLRDRRPVNAMPARGRPIAPVARSYDRGPPVASYSKSSLKR 600
Query: 601 EYGRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGY 660
+YGRR ELHPSRSR+LVDY SRVVPERN SYRD+Y SRAAAF DPPRR+APRRAYVDDGY
Sbjct: 601 DYGRREELHPSRSRMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGY 660
Query: 661 GRRFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQ 720
GRRFERPPPPS+RDVRARDYDA IGSKRPYSS+SDVPPAYAD+ VRQSRSRLDYDY A
Sbjct: 661 GRRFERPPPPSFRDVRARDYDAIIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 720
Query: 721 YGHGDAYDSR 724
+GDAYDSR
Sbjct: 721 SQYGDAYDSR 720
BLAST of Sed0004335.4 vs. ExPASy Swiss-Prot
Match:
O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)
HSP 1 Score: 137.5 bits (345), Expect = 6.0e-31
Identity = 97/306 (31.70%), Postives = 155/306 (50.65%), Query Frame = 0
Query: 236 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 295
E+F+G + +D+ E++L +F G + ++RLMM+P T N+G+AF+ F T E A+ AV
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 296 LKNPVI-NGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNN 355
N I +GK GV S ++ LF+G+I KS +K+ + E+ + + D+ L ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282
Query: 356 EGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTV 415
+ NRGF FLE+ A A +RL V V +AD DP E+M++VK +
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVW-GNVGTVEWADPIEDPDPEVMAKVKVL 342
Query: 416 FVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNIN 475
FV +L + E+ + ++G++E+++ K KD+ F+ FD D AV + +N
Sbjct: 343 FVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEMN 402
Query: 476 NTELGEGDN------KAKVRARLSRPLQRGKGKYAGRADYW--------PSRATDGRSVR 527
+L EG+N K + R R QR K DY+ P GR R
Sbjct: 403 GKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGGR 457
BLAST of Sed0004335.4 vs. ExPASy Swiss-Prot
Match:
Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)
HSP 1 Score: 137.1 bits (344), Expect = 7.9e-31
Identity = 97/306 (31.70%), Postives = 155/306 (50.65%), Query Frame = 0
Query: 236 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 295
E+F+G + +D+ E++L +F G + ++RLMM+P T N+G+AF+ F T E A+ AV
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 296 LKNPVI-NGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNN 355
N I +GK GV S ++ LF+G+I KS +K+ + E+ + + D+ L ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282
Query: 356 EGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTV 415
+ NRGF FLE+ A A +RL V V +AD DP E+M++VK +
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVW-GNVGTVEWADPIEDPDPEVMAKVKVL 342
Query: 416 FVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNIN 475
FV +L + E+ + ++G++E+++ K KD+ F+ FD D AV + +N
Sbjct: 343 FVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEMN 402
Query: 476 NTELGEGDN------KAKVRARLSRPLQRGKGKYAGRADYW--------PSRATDGRSVR 527
+L EG+N K + R R QR K DY+ P GR R
Sbjct: 403 GKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGGR 457
BLAST of Sed0004335.4 vs. ExPASy Swiss-Prot
Match:
Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 7.9e-31
Identity = 97/306 (31.70%), Postives = 155/306 (50.65%), Query Frame = 0
Query: 236 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 295
E+F+G + +D+ E++L +F G + ++RLMM+P T N+G+AF+ F T E A+ AV
Sbjct: 73 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132
Query: 296 LKNPVI-NGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNN 355
N I +GK GV S ++ LF+G+I KS +K+ + E+ + + D+ L ++
Sbjct: 133 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 192
Query: 356 EGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTV 415
+ NRGF FLE+ A A +RL V V +AD DP E+M++VK +
Sbjct: 193 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVW-GNVGTVEWADPIEDPDPEVMAKVKVL 252
Query: 416 FVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNIN 475
FV +L + E+ + ++G++E+++ K KD+ F+ FD D AV + +N
Sbjct: 253 FVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEMN 312
Query: 476 NTELGEGDN------KAKVRARLSRPLQRGKGKYAGRADYW--------PSRATDGRSVR 527
+L EG+N K + R R QR K DY+ P GR R
Sbjct: 313 GKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGGR 367
BLAST of Sed0004335.4 vs. ExPASy Swiss-Prot
Match:
Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 3.4e-26
Identity = 138/458 (30.13%), Postives = 233/458 (50.87%), Query Frame = 0
Query: 132 EKDERLDLEDNDPESEPEEEFDEKETEEEDAQGMVYEEGEAEDNVG-----EEEGDDMGE 191
+ D+R+D E+ SE E+E +E++ EE + + EE + +D+VG E E +D G+
Sbjct: 6 DNDDRVDFEEGS-YSEMEDEVEEEQVEEYEEE---EEEDDDDDDVGNQNAEEREVEDYGD 65
Query: 192 ---DDVEDVQEDLEGEED---DQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEFEVFIG 251
D+EDVQE++ ++D D + A+D E DED + EVFIG
Sbjct: 66 TKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIG 125
Query: 252 GLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPV 311
GL +DV EEDL+ + +GE+ EVRLM + + +KG+AF+ F T + A++A+ EL +
Sbjct: 126 GLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKE 185
Query: 312 INGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNEGSNRG 371
GK + S+ + LF+GNI K+W++D ++ ++ G VE++ LI+D N NRG
Sbjct: 186 FKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRNRG 245
Query: 372 FSFLEFASRSEAMDAFKRLQKRDVMFGVDRPA-KVSFADSFIDP-GDEIMSQVKTVFVDS 431
F+F+ + + A + R + D F ++ A V++AD P +QVK ++V +
Sbjct: 246 FAFVLY--YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 305
Query: 432 LPASWDEDFVRGLLKKYGEVEKIELARNMPSAK--RKDFGFVTFDSHDAAVSCAKNINNT 491
+P + + ++ L +++GEV KI P K ++DFGFV + +A+ K+
Sbjct: 306 IPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTERY 365
Query: 492 ELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWG--RPAPRSLPVR 551
E+ N + L++P + + K+ + + + T V ++G AP
Sbjct: 366 EV----NGQPLEVVLAKP--QAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGA 425
Query: 552 GLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAP 573
GL GS P+ R +MPT G Q+ P
Sbjct: 426 GLGIAGSFSQPMIYGRG----------AMPT-GMQMVP 435
BLAST of Sed0004335.4 vs. ExPASy Swiss-Prot
Match:
O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 1.0e-25
Identity = 90/302 (29.80%), Postives = 156/302 (51.66%), Query Frame = 0
Query: 236 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 295
EVF+G + +D+ E++L +F G + ++RLMM+P + +N+G+AF+ F E A+ AV
Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225
Query: 296 LKNPVIN-GKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNN 355
+ I GK GV S ++ LF+G+I K+ +K+ + E+ + + D+ L ++
Sbjct: 226 CDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKV-TEGLVDVILYHQPDD 285
Query: 356 EGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTV 415
+ NRGF FLE+ A A +RL V V +AD +P E+M++VK +
Sbjct: 286 KKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVW-GNVVTVEWADPVEEPDPEVMAKVKVL 345
Query: 416 FVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNIN 475
FV +L + E+ + ++G++E+++ K KD+ FV F+ AAV +N
Sbjct: 346 FVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMDEMN 405
Query: 476 NTELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPR-SLPV 535
E+ EG+ V A+ P ++ K + A R +A+ + + P PR P+
Sbjct: 406 GKEI-EGEEIEIVLAK--PPDKKRKERQAAR------QASRSTAYEDYYYHPPPRMPPPI 448
BLAST of Sed0004335.4 vs. ExPASy TrEMBL
Match:
A0A6J1CZX0 (nucleolin OS=Momordica charantia OX=3673 GN=LOC111016019 PE=4 SV=1)
HSP 1 Score: 1117.1 bits (2888), Expect = 0.0e+00
Identity = 606/730 (83.01%), Postives = 653/730 (89.45%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRGA+SAGSKRGGRVTRGTPKKQD P E EV E TVKVEEV V E
Sbjct: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDPPXEREVPEETVKVEEVSV---------VE 60
Query: 61 VETKELHEDVPV--LEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQA 120
VETKEL E+V V EKSPVVEDKPVIQ+KP V+E+K+P+AIDVEEVEP + SDSKQ+
Sbjct: 61 VETKELREEVTVKEKEKSPVVEDKPVIQSKPVVVEEKQPIAIDVEEVEPPHDVRSDSKQS 120
Query: 121 VLSKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAE 180
V KK EEVKD+E+ KDERLDLEDNDPESEPEE EFDEKE E+ED Q +V +GE E
Sbjct: 121 VPPKKEEEVKDDEYGKDERLDLEDNDPESEPEEYGGFEFDEKEIEQEDVQEVVDGDGEPE 180
Query: 181 DNVGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRK 240
DNVG+EE GE+DVEDVQED EGEEDDQQAAEDHEHA MVD DE+EH +V KERRKRK
Sbjct: 181 DNVGDEE----GEEDVEDVQEDPEGEEDDQQAAEDHEHAGMVDADEEEHHEVFKERRKRK 240
Query: 241 EFEVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
EFEVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV
Sbjct: 241 EFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
Query: 301 SELKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSN 360
SELKNPVINGK+CGVTPSQDSDTLFLGNI K+W KD LKEKLKHYGVDNVEDLTL+EDSN
Sbjct: 301 SELKNPVINGKQCGVTPSQDSDTLFLGNINKTWKKDALKEKLKHYGVDNVEDLTLVEDSN 360
Query: 361 NEGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKT 420
NEGSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKT
Sbjct: 361 NEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 420
Query: 421 VFVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNI 480
VFVDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFDSHDAAVSCAK+I
Sbjct: 421 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKSI 480
Query: 481 NNTELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPV 540
NN+ELGEGDNKAKVRARLSRPLQRGKGK+AGRAD+WP R T GR+VRGSWGRPAPRSL V
Sbjct: 481 NNSELGEGDNKAKVRARLSRPLQRGKGKHAGRADFWPGR-TSGRAVRGSWGRPAPRSLSV 540
Query: 541 RGLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKR 600
RG+R VGSHFPPVSVKR G VR+RRPVI++P RGRQIAP ARSYDRGPPVASYSKS+LKR
Sbjct: 541 RGVRGVGSHFPPVSVKRPGGVRDRRPVIAVPVRGRQIAPVARSYDRGPPVASYSKSNLKR 600
Query: 601 EYGRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGY 660
+YGRR ELHPSRSRVLVDY SRVVPERN YRDEY SRA F DPPRR+APRRAY+DDGY
Sbjct: 601 DYGRREELHPSRSRVLVDYASRVVPERNPPYRDEYASRAPGFSDPPRRDAPRRAYLDDGY 660
Query: 661 GRRFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQ 720
GRRFERPPPPSYRDVRARDYDA IGSKRPYSS+SDVPPAYAD+ VRQSRSRL+Y+Y A
Sbjct: 661 GRRFERPPPPSYRDVRARDYDAIIGSKRPYSSLSDVPPAYADAGVRQSRSRLEYEYGAGA 716
Query: 721 YGHGDAYDSR 724
+GDAYDSR
Sbjct: 721 SQYGDAYDSR 716
BLAST of Sed0004335.4 vs. ExPASy TrEMBL
Match:
A0A1S3AW67 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103483455 PE=4 SV=1)
HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 600/728 (82.42%), Postives = 647/728 (88.87%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRG++SAG+KRGGR TRGTPKKQD P E EV E T KVEEV V E
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVAEETAKVEEVSV---------VE 60
Query: 61 VETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQAVL 120
VETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+P+A+DV EVE ++ SDSKQ+V
Sbjct: 61 VETKELREEVAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSHEVRSDSKQSVP 120
Query: 121 SKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAEDN 180
KK EEVKDEE+ KDERLDLEDNDPESEPEE E+DEKE E+ED Q +V EGE EDN
Sbjct: 121 PKKEEEVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDN 180
Query: 181 VGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEF 240
VG+EEG DM E+DVED QEDLEGE+DDQQ EDHEHA MVD DEDEH +VVKERRKRKEF
Sbjct: 181 VGDEEG-DMVEEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEF 240
Query: 241 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
EVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE
Sbjct: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
Query: 301 LKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNE 360
LKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSNNE
Sbjct: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
Query: 361 GSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTVF 420
GSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKTVF
Sbjct: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
Query: 421 VDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINN 480
VDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFD+HDAAVSCAK+INN
Sbjct: 421 VDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
Query: 481 TELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPVRG 540
+ELGEGD+KAKVRARLSRPLQRGKGK+A RADYWP R T GR VRGSW RPAPRS+P+RG
Sbjct: 481 SELGEGDSKAKVRARLSRPLQRGKGKHASRADYWPGRTT-GR-VRGSWARPAPRSIPIRG 540
Query: 541 LRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKREY 600
+R VGSH PPVSVKR VR+RRPVI++P RGR +A ARSYDRGPPVASYSKSSLKREY
Sbjct: 541 VRGVGSHLPPVSVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKREY 600
Query: 601 GRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGYGR 660
GRR ELHPSRSR+LVDY SRVVPERN SYRDEY SRAAAF DPPRR+APRRAYVDDGY R
Sbjct: 601 GRREELHPSRSRMLVDYASRVVPERNPSYRDEYASRAAAFSDPPRRDAPRRAYVDDGYSR 660
Query: 661 RFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQYG 720
RFERPPPPSYRDVRARDYDA IGSKRPYSSMSDVPPAYAD+ VRQSRSRLDYDY
Sbjct: 661 RFERPPPPSYRDVRARDYDALIGSKRPYSSMSDVPPAYADAGVRQSRSRLDYDYGTGASQ 716
Query: 721 HGDAYDSR 724
+GDAYDSR
Sbjct: 721 YGDAYDSR 716
BLAST of Sed0004335.4 vs. ExPASy TrEMBL
Match:
A0A0A0L6P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129610 PE=4 SV=1)
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 599/728 (82.28%), Postives = 647/728 (88.87%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPPRTVKRG++SAG+KRGGR TRGTPKKQD P E EVVE T KVEEV V E
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSV---------VE 60
Query: 61 VETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQAVL 120
VETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+P+A+DV EVE + SDSKQ+V
Sbjct: 61 VETKELREEVAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSREVRSDSKQSVP 120
Query: 121 SKK-EEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAEDN 180
KK EEVKDEE+ KDERLDLEDNDPESEP+E E+DEKE E+ED Q +V EGE EDN
Sbjct: 121 PKKEEEVKDEEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGEPEDN 180
Query: 181 VGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEF 240
VG+EEG DM E+DVED QEDLEGE+DDQQ EDHEHA MVD DEDEH +VVKERRKRKEF
Sbjct: 181 VGDEEG-DMVEEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEF 240
Query: 241 EVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
EVF+GGLDKDVKEEDLKKVFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE
Sbjct: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSE 300
Query: 301 LKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNE 360
LKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSNNE
Sbjct: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
Query: 361 GSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKTVF 420
GSNRGF+FLEF+SRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKTVF
Sbjct: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
Query: 421 VDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINN 480
VDSLPASWDE+FVRGLLKKYGE+EKIELARNMPSAKRKDFGFVTFD+HDAAVSCAK+INN
Sbjct: 421 VDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
Query: 481 TELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPVRG 540
+ELGEGDNKAKVRARLSRPLQRGKGK+A R DYWP R T GR VRGSW RPAPRS+P+RG
Sbjct: 481 SELGEGDNKAKVRARLSRPLQRGKGKHASRTDYWPGRTT-GR-VRGSWTRPAPRSIPIRG 540
Query: 541 LRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKREY 600
+R VGSH PPVSVKR VR+RRPVI++P RGR +A ARSYDRGPPVASYSKSSLKR+Y
Sbjct: 541 VRGVGSHLPPVSVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKRDY 600
Query: 601 GRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGYGR 660
GRR ELHPSRSR+LVDY SRVVPERN SYRD+Y SRAAAF DPPRR+APRRAYVDDGY R
Sbjct: 601 GRREELHPSRSRMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGYSR 660
Query: 661 RFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQYG 720
RFERPPPPSYRDVRARDYDA IGSKRPYSSMSDVPPAYAD+ VRQSRSRLDYDY A
Sbjct: 661 RFERPPPPSYRDVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAGASQ 716
Query: 721 HGDAYDSR 724
+GDAYDSR
Sbjct: 721 YGDAYDSR 716
BLAST of Sed0004335.4 vs. ExPASy TrEMBL
Match:
A0A6J1EC73 (nucleolin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431876 PE=4 SV=1)
HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 594/730 (81.37%), Postives = 643/730 (88.08%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPP---EPEVVEATVKVEEVEVETKTVKVE 60
MPPRTVKRG +SAGSKRGGRVTRGTPKKQ+ E EVVE KVEEV V V+VE
Sbjct: 1 MPPRTVKRGGASAGSKRGGRVTRGTPKKQEKQEPVVEREVVEEVAKVEEVSV----VEVE 60
Query: 61 ESEVETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQ 120
ETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+ +AIDVEEVEP ++ S
Sbjct: 61 ----ETKELREEVTVQEKSPVVEDKPVIQNKPVVVEEKQRIAIDVEEVEPSHEVRSKQSA 120
Query: 121 AVLSKKEEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAE 180
+EEVKDEE+ KDERLDLEDNDPESEPEE EFDEKE E+E Q +V EGE
Sbjct: 121 PPKKDEEEVKDEEYGKDERLDLEDNDPESEPEEDAGFEFDEKEIEQEAVQEVVDGEGEPV 180
Query: 181 DNVGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRK 240
DNVG EEG DMG+DDV+D QEDLEGE+DDQQA ED +HA MVDVDEDEH +VVKERRKRK
Sbjct: 181 DNVGHEEG-DMGDDDVDDAQEDLEGEDDDQQAGEDRDHAGMVDVDEDEHHEVVKERRKRK 240
Query: 241 EFEVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
EFEVF+GGLDKDVKEEDLK+VFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV
Sbjct: 241 EFEVFVGGLDKDVKEEDLKEVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
Query: 301 SELKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSN 360
SELKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSN
Sbjct: 301 SELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDILKEKLKHYGVDNVEDLTLVEDSN 360
Query: 361 NEGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKT 420
NEGSNRGF+FLEFASRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKT
Sbjct: 361 NEGSNRGFAFLEFASRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 420
Query: 421 VFVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNI 480
VFVDSLPASWDE+FVRGLLKKYGE+EK+ELARNMPSAKRKDFGFVTFD+HDAAVSCAK+I
Sbjct: 421 VFVDSLPASWDEEFVRGLLKKYGEIEKVELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 480
Query: 481 NNTELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPV 540
NN+ELGEGDNKAKVRARLSRPLQRGKGK+ R DYWP RAT GR+VRGSWG+P PRSLPV
Sbjct: 481 NNSELGEGDNKAKVRARLSRPLQRGKGKHVSRTDYWPGRAT-GRAVRGSWGQPGPRSLPV 540
Query: 541 RGLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKR 600
RG+R VGSH PPV VKR G +R+RRPV +MP RGR IAP ARSYDRGPPVASYSKSSLKR
Sbjct: 541 RGVRGVGSHLPPVGVKRPGGLRDRRPVNAMPARGRPIAPVARSYDRGPPVASYSKSSLKR 600
Query: 601 EYGRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGY 660
+YGRR ELHPSRSR+LVDY SRVVPERN SYRD+Y SRAAAF DPPRR+APRRAYVDDGY
Sbjct: 601 DYGRREELHPSRSRMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGY 660
Query: 661 GRRFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQ 720
GRRFERPPPPS+RDVRARDYDA IGSKRPYSS+SDVPPAYAD+ VRQSRSRLDYDY A
Sbjct: 661 GRRFERPPPPSFRDVRARDYDAIIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 720
Query: 721 YGHGDAYDSR 724
+GDAYDSR
Sbjct: 721 SQYGDAYDSR 720
BLAST of Sed0004335.4 vs. ExPASy TrEMBL
Match:
A0A6J1E8X6 (nucleolin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431876 PE=4 SV=1)
HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 595/730 (81.51%), Postives = 645/730 (88.36%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPP---EPEVVEATVKVEEVEVETKTVKVE 60
MPPRTVKRG +SAGSKRGGRVTRGTPKKQ+ E EVVE KVEEV V V+VE
Sbjct: 1 MPPRTVKRGGASAGSKRGGRVTRGTPKKQEKQEPVVEREVVEEVAKVEEVSV----VEVE 60
Query: 61 ESEVETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAIDVEEVEPLNKASSDSKQ 120
ETKEL E+V V EKSPVVEDKPVIQNKP V+E+K+ +AIDVEEVEP ++ S +
Sbjct: 61 ----ETKELREEVTVQEKSPVVEDKPVIQNKPVVVEEKQRIAIDVEEVEPSHEVRS-KQS 120
Query: 121 AVLSKKEEVKDEEFEKDERLDLEDNDPESEPEE----EFDEKETEEEDAQGMVYEEGEAE 180
A +EEVKDEE+ KDERLDLEDNDPESEPEE EFDEKE E+E Q +V EGE
Sbjct: 121 APPKNEEEVKDEEYGKDERLDLEDNDPESEPEEDAGFEFDEKEIEQEAVQEVVDGEGEPV 180
Query: 181 DNVGEEEGDDMGEDDVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRK 240
DNVG EEG DMG+DDV+D QEDLEGE+DDQQA ED +HA MVDVDEDEH +VVKERRKRK
Sbjct: 181 DNVGHEEG-DMGDDDVDDAQEDLEGEDDDQQAGEDRDHAGMVDVDEDEHHEVVKERRKRK 240
Query: 241 EFEVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
EFEVF+GGLDKDVKEEDLK+VFS VGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV
Sbjct: 241 EFEVFVGGLDKDVKEEDLKEVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAV 300
Query: 301 SELKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSN 360
SELKNPVINGK+CGVTPSQDSDTLFLGNICK+W KD LKEKLKHYGVDNVEDLTL+EDSN
Sbjct: 301 SELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDILKEKLKHYGVDNVEDLTLVEDSN 360
Query: 361 NEGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQVKT 420
NEGSNRGF+FLEFASRS+AMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIM+QVKT
Sbjct: 361 NEGSNRGFAFLEFASRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 420
Query: 421 VFVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNI 480
VFVDSLPASWDE+FVRGLLKKYGE+EK+ELARNMPSAKRKDFGFVTFD+HDAAVSCAK+I
Sbjct: 421 VFVDSLPASWDEEFVRGLLKKYGEIEKVELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 480
Query: 481 NNTELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWGRPAPRSLPV 540
NN+ELGEGDNKAKVRARLSRPLQRGKGK+ R DYWP RAT GR+VRGSWG+P PRSLPV
Sbjct: 481 NNSELGEGDNKAKVRARLSRPLQRGKGKHVSRTDYWPGRAT-GRAVRGSWGQPGPRSLPV 540
Query: 541 RGLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAPPARSYDRGPPVASYSKSSLKR 600
RG+R VGSH PPV VKR G +R+RRPV +MP RGR IAP ARSYDRGPPVASYSKSSLKR
Sbjct: 541 RGVRGVGSHLPPVGVKRPGGLRDRRPVNAMPARGRPIAPVARSYDRGPPVASYSKSSLKR 600
Query: 601 EYGRRGELHPSRSRVLVDYGSRVVPERNASYRDEYESRAAAFPDPPRREAPRRAYVDDGY 660
+YGRR ELHPSRSR+LVDY SRVVPERN SYRD+Y SRAAAF DPPRR+APRRAYVDDGY
Sbjct: 601 DYGRREELHPSRSRMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGY 660
Query: 661 GRRFERPPPPSYRDVRARDYDAPIGSKRPYSSMSDVPPAYADSAVRQSRSRLDYDYVASQ 720
GRRFERPPPPS+RDVRARDYDA IGSKRPYSS+SDVPPAYAD+ VRQSRSRLDYDY A
Sbjct: 661 GRRFERPPPPSFRDVRARDYDAIIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 719
Query: 721 YGHGDAYDSR 724
+GDAYDSR
Sbjct: 721 SQYGDAYDSR 719
BLAST of Sed0004335.4 vs. TAIR 10
Match:
AT2G44710.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 632.9 bits (1631), Expect = 3.2e-181
Identity = 401/755 (53.11%), Postives = 505/755 (66.89%), Query Frame = 0
Query: 1 MPPRTVKRGASSAGSKRGGRVTRGTPKKQDNPPEPEVVEATVKVEEVEVETKTVKVEESE 60
MPP+ VKRG + ++RGGR+TR K Q NP VE S
Sbjct: 1 MPPKVVKRGGA---ARRGGRLTRSALKAQ-NP----------------------HVESSH 60
Query: 61 VETKELHEDVPVLEKSPVVEDKPVIQNKPEVLEQKKPVAI--DVEEVEPLNKASSDSKQA 120
E+ + E L S +E K V + +E++ P+ + + ++ A++
Sbjct: 61 DESVNIGE----LSGSDALEAKEVTPEVDKTVEEENPLDVPKSSDSIDDSEAAANPHVDV 120
Query: 121 VLSKKEEVKD--EEFEKDERLDLEDNDPESEPE----EEFDEKETEEEDAQGMVYEEG-E 180
K+ EV++ ++F KDERLDL+DN+PE E E EEF+E+E +ED + +V EEG E
Sbjct: 121 PSKKETEVEESVDDFGKDERLDLDDNEPEYEAEEYGGEEFEERELGQEDHE-LVNEEGEE 180
Query: 181 AEDNVGEEEGDDMGEDDVEDVQEDLEGE-EDDQQAAEDHEHAAMVDVDEDEHQQVVKERR 240
E+ + EE D++ D EDL+ E +DD A E+ +H VDV+E+EH V+ ERR
Sbjct: 181 LEEEIEVEEEAGEFADEIGDGAEDLDSEDDDDDHAIEEVKHGETVDVEEEEHHDVLHERR 240
Query: 241 KRKEFEVFIGGLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAK 300
KRKEFE+F+G LDK EEDLKKVF VGEVTEVR++ NPQTKK+KG AFLRFATVE+AK
Sbjct: 241 KRKEFEIFVGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAK 300
Query: 301 RAVSELKNPVINGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIE 360
RAV ELK+P+INGKKCGVT SQD+DTLF+GNICK W+ + L+EKLKHYGV+N++D+TL+E
Sbjct: 301 RAVKELKSPMINGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVE 360
Query: 361 DSNNEGSNRGFSFLEFASRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFIDPGDEIMSQ 420
DSNN NRG++FLEF+SRS+AMDA KRL K+DVMFGV++PAKVSF DSF+D DEIM+Q
Sbjct: 361 DSNNVNMNRGYAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQ 420
Query: 421 VKTVFVDSLPASWDEDFVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCA 480
VKT+F+D L SW+E+ VR LLK YG++EK+ELARNMPSA+RKDFGFVTFD+H+AAVSCA
Sbjct: 421 VKTIFIDGLLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCA 480
Query: 481 KNINNTELGEGDNKAKVRARLSRPLQR-GKGKYAGRADYWPSRATDGRSVRGSWGRPAPR 540
K INN+ELGEG++KAKVRARLSRPLQ+ GKG+ + R+D SR GRS R S+ R PR
Sbjct: 481 KFINNSELGEGEDKAKVRARLSRPLQKAGKGRQSSRSDQ-RSRHGAGRSGRSSFARLPPR 540
Query: 541 SL-PVRGLRSVGSHFPPVSVKRAGVVRERRP--------------------VISMPTRGR 600
SL R R GS P S KRA R RRP + P R R
Sbjct: 541 SLASSRSARGAGSRAPSSSAKRASGSRGRRPRPPLPPPARARPLPPPARARPMPPPARAR 600
Query: 601 QIAPPARSYDRGPPVASYSKSSLKREYGRRGELHPSRSRVLVDYGSRVVPERNASYRDEY 660
+ PPARSYDR PPV Y K+SLKR+Y RR EL P RSR V Y SR+ PER+ SYRD+Y
Sbjct: 601 PLPPPARSYDRRPPVPLYPKASLKRDYDRRDELPPPRSRPAVSYSSRLSPERHLSYRDDY 660
Query: 661 ESRAAAFPDPPR---REAPRRAYVDDGYGRRFERPPPPSYRDVRARDYDAPIGSKRPYSS 719
R + + D PR R RR +VDD Y RFER PPSY + R R Y+ GSKRPY++
Sbjct: 661 PPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFER--PPSYSEGRPRAYEPLPGSKRPYAA 720
BLAST of Sed0004335.4 vs. TAIR 10
Match:
AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 121.7 bits (304), Expect = 2.4e-27
Identity = 138/458 (30.13%), Postives = 233/458 (50.87%), Query Frame = 0
Query: 132 EKDERLDLEDNDPESEPEEEFDEKETEEEDAQGMVYEEGEAEDNVG-----EEEGDDMGE 191
+ D+R+D E+ SE E+E +E++ EE + + EE + +D+VG E E +D G+
Sbjct: 6 DNDDRVDFEEGS-YSEMEDEVEEEQVEEYEEE---EEEDDDDDDVGNQNAEEREVEDYGD 65
Query: 192 ---DDVEDVQEDLEGEED---DQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEFEVFIG 251
D+EDVQE++ ++D D + A+D E DED + EVFIG
Sbjct: 66 TKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIG 125
Query: 252 GLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPV 311
GL +DV EEDL+ + +GE+ EVRLM + + +KG+AF+ F T + A++A+ EL +
Sbjct: 126 GLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKE 185
Query: 312 INGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNEGSNRG 371
GK + S+ + LF+GNI K+W++D ++ ++ G VE++ LI+D N NRG
Sbjct: 186 FKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRNRG 245
Query: 372 FSFLEFASRSEAMDAFKRLQKRDVMFGVDRPA-KVSFADSFIDP-GDEIMSQVKTVFVDS 431
F+F+ + + A + R + D F ++ A V++AD P +QVK ++V +
Sbjct: 246 FAFVLY--YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 305
Query: 432 LPASWDEDFVRGLLKKYGEVEKIELARNMPSAK--RKDFGFVTFDSHDAAVSCAKNINNT 491
+P + + ++ L +++GEV KI P K ++DFGFV + +A+ K+
Sbjct: 306 IPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTERY 365
Query: 492 ELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWG--RPAPRSLPVR 551
E+ N + L++P + + K+ + + + T V ++G AP
Sbjct: 366 EV----NGQPLEVVLAKP--QAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGA 425
Query: 552 GLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAP 573
GL GS P+ R +MPT G Q+ P
Sbjct: 426 GLGIAGSFSQPMIYGRG----------AMPT-GMQMVP 435
BLAST of Sed0004335.4 vs. TAIR 10
Match:
AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 121.7 bits (304), Expect = 2.4e-27
Identity = 138/458 (30.13%), Postives = 233/458 (50.87%), Query Frame = 0
Query: 132 EKDERLDLEDNDPESEPEEEFDEKETEEEDAQGMVYEEGEAEDNVG-----EEEGDDMGE 191
+ D+R+D E+ SE E+E +E++ EE + + EE + +D+VG E E +D G+
Sbjct: 6 DNDDRVDFEEGS-YSEMEDEVEEEQVEEYEEE---EEEDDDDDDVGNQNAEEREVEDYGD 65
Query: 192 ---DDVEDVQEDLEGEED---DQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEFEVFIG 251
D+EDVQE++ ++D D + A+D E DED + EVFIG
Sbjct: 66 TKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIG 125
Query: 252 GLDKDVKEEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPV 311
GL +DV EEDL+ + +GE+ EVRLM + + +KG+AF+ F T + A++A+ EL +
Sbjct: 126 GLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKE 185
Query: 312 INGKKCGVTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNEGSNRG 371
GK + S+ + LF+GNI K+W++D ++ ++ G VE++ LI+D N NRG
Sbjct: 186 FKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRNRG 245
Query: 372 FSFLEFASRSEAMDAFKRLQKRDVMFGVDRPA-KVSFADSFIDP-GDEIMSQVKTVFVDS 431
F+F+ + + A + R + D F ++ A V++AD P +QVK ++V +
Sbjct: 246 FAFVLY--YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKN 305
Query: 432 LPASWDEDFVRGLLKKYGEVEKIELARNMPSAK--RKDFGFVTFDSHDAAVSCAKNINNT 491
+P + + ++ L +++GEV KI P K ++DFGFV + +A+ K+
Sbjct: 306 IPENTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTERY 365
Query: 492 ELGEGDNKAKVRARLSRPLQRGKGKYAGRADYWPSRATDGRSVRGSWG--RPAPRSLPVR 551
E+ N + L++P + + K+ + + + T V ++G AP
Sbjct: 366 EV----NGQPLEVVLAKP--QAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGA 425
Query: 552 GLRSVGSHFPPVSVKRAGVVRERRPVISMPTRGRQIAP 573
GL GS P+ R +MPT G Q+ P
Sbjct: 426 GLGIAGSFSQPMIYGRG----------AMPT-GMQMVP 435
BLAST of Sed0004335.4 vs. TAIR 10
Match:
AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 120.2 bits (300), Expect = 7.1e-27
Identity = 98/352 (27.84%), Postives = 175/352 (49.72%), Query Frame = 0
Query: 129 EEFEKDERLDLE-DNDPESEPEEEFDEKETEEEDAQGMVYEEGEAEDNVGEEEGDDMGED 188
+ E +ER+DL+ DNDPE EEE + +E EEE
Sbjct: 13 DSMESEERVDLDGDNDPEEILEEEVEYEEVEEE--------------------------- 72
Query: 189 DVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEFEVFIGGLDKDVK 248
++E+++E++E EE + + E+ E A + +E++ + V EV++GG+ D
Sbjct: 73 EIEEIEEEIE-EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDAT 132
Query: 249 EEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKKCG 308
E DLK +GEVTEVR+M + KG+AF+ F + + A A+ L N GK+
Sbjct: 133 EGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIK 192
Query: 309 VTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNEGSNRGFSFLEFA 368
+ +Q LFLGN+ ++W + +K+ G V+ + L ++ N G NRGF+F+E+
Sbjct: 193 CSTTQAKHRLFLGNVPRNWMESDIKKAANRIG-PGVQIVELPKEPQNMGRNRGFAFIEYY 252
Query: 369 SRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFI-DPGDEIMSQVKTVFVDSLPASWDED 428
+ + A + +++ + P VS+A+S GD SQVK +++ +LP ++
Sbjct: 253 NHACAEYSKQKMSNPSFKLDDNAPT-VSWAESRSGGGGDSSASQVKALYIKNLPRDITQE 312
Query: 429 FVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINNTEL 479
++ L + +G++ K+ + P + +GFV + + + KN E+
Sbjct: 313 RLKALFEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEI 334
BLAST of Sed0004335.4 vs. TAIR 10
Match:
AT3G52660.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 120.2 bits (300), Expect = 7.1e-27
Identity = 98/352 (27.84%), Postives = 175/352 (49.72%), Query Frame = 0
Query: 129 EEFEKDERLDLE-DNDPESEPEEEFDEKETEEEDAQGMVYEEGEAEDNVGEEEGDDMGED 188
+ E +ER+DL+ DNDPE EEE + +E EEE
Sbjct: 13 DSMESEERVDLDGDNDPEEILEEEVEYEEVEEE--------------------------- 72
Query: 189 DVEDVQEDLEGEEDDQQAAEDHEHAAMVDVDEDEHQQVVKERRKRKEFEVFIGGLDKDVK 248
++E+++E++E EE + + E+ E A + +E++ + V EV++GG+ D
Sbjct: 73 EIEEIEEEIE-EEVEVEEEEEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDAT 132
Query: 249 EEDLKKVFSVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKKCG 308
E DLK +GEVTEVR+M + KG+AF+ F + + A A+ L N GK+
Sbjct: 133 EGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIK 192
Query: 309 VTPSQDSDTLFLGNICKSWSKDTLKEKLKHYGVDNVEDLTLIEDSNNEGSNRGFSFLEFA 368
+ +Q LFLGN+ ++W + +K+ G V+ + L ++ N G NRGF+F+E+
Sbjct: 193 CSTTQAKHRLFLGNVPRNWMESDIKKAANRIG-PGVQIVELPKEPQNMGRNRGFAFIEYY 252
Query: 369 SRSEAMDAFKRLQKRDVMFGVDRPAKVSFADSFI-DPGDEIMSQVKTVFVDSLPASWDED 428
+ + A + +++ + P VS+A+S GD SQVK +++ +LP ++
Sbjct: 253 NHACAEYSKQKMSNPSFKLDDNAPT-VSWAESRSGGGGDSSASQVKALYIKNLPRDITQE 312
Query: 429 FVRGLLKKYGEVEKIELARNMPSAKRKDFGFVTFDSHDAAVSCAKNINNTEL 479
++ L + +G++ K+ + P + +GFV + + + KN E+
Sbjct: 313 RLKALFEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEI 334
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038895622.1 | 0.0e+00 | 82.28 | heterogeneous nuclear ribonucleoprotein Q isoform X1 [Benincasa hispida] | [more] |
XP_022146943.1 | 0.0e+00 | 83.01 | nucleolin [Momordica charantia] >XP_022146944.1 nucleolin [Momordica charantia] ... | [more] |
XP_008438311.1 | 0.0e+00 | 82.42 | PREDICTED: nucleolin [Cucumis melo] | [more] |
XP_004133977.1 | 0.0e+00 | 82.28 | nucleolin [Cucumis sativus] >KGN56704.1 hypothetical protein Csa_010835 [Cucumis... | [more] |
KAG7018879.1 | 0.0e+00 | 81.64 | Heterogeneous nuclear ribonucleoprotein Q [Cucurbita argyrosperma subsp. argyros... | [more] |
Match Name | E-value | Identity | Description | |
O60506 | 6.0e-31 | 31.70 | Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=... | [more] |
Q7TMK9 | 7.9e-31 | 31.70 | Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE... | [more] |
Q7TP47 | 7.9e-31 | 31.70 | Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr... | [more] |
Q9ASP6 | 3.4e-26 | 30.13 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF... | [more] |
O43390 | 1.0e-25 | 29.80 | Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CZX0 | 0.0e+00 | 83.01 | nucleolin OS=Momordica charantia OX=3673 GN=LOC111016019 PE=4 SV=1 | [more] |
A0A1S3AW67 | 0.0e+00 | 82.42 | nucleolin OS=Cucumis melo OX=3656 GN=LOC103483455 PE=4 SV=1 | [more] |
A0A0A0L6P0 | 0.0e+00 | 82.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129610 PE=4 SV=1 | [more] |
A0A6J1EC73 | 0.0e+00 | 81.37 | nucleolin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431876 PE=4 SV=... | [more] |
A0A6J1E8X6 | 0.0e+00 | 81.51 | nucleolin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431876 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |
AT2G44710.1 | 3.2e-181 | 53.11 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.1 | 2.4e-27 | 30.13 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G00830.2 | 2.4e-27 | 30.13 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G52660.1 | 7.1e-27 | 27.84 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G52660.2 | 7.1e-27 | 27.84 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |