Sed0004092.1 (mRNA) Chayote v1

Overview
NameSed0004092.1
TypemRNA
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L44
LocationLG07: 4571559 .. 4573951 (-)
Sequence length852
RNA-Seq ExpressionSed0004092.1
SyntenySed0004092.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAATCCCCAAATTCCAAATCCAAGCCCCACCATTTTCTCAGCTGCTTTGGATTTTCCGGCAAATTCCGCCGCTTTAAGTCCATCAAACCCGCCGCCGCTCATAAAAAGCGCCCGTTTTCTTGGATAAAGCTCCACTTCAAGCCTCGCCCTACTTTTCCGACCGAACCGAACCGGTTTAATCCGGATTCTGACCGGCCCGCCTTGAAATCTGTTACTCCGGCCGCCGGTTGTAAGTCATCGAATGAAGATTTTGCTGTTATGTTGCCGGCGGCGACAAATCAGTCCGGCGAGGAGAGACTGGTAGAGGTATGAAATTAAAAAATATAAAATAAAATAAAAATTAGTACTATGAAAATTTTGAGATTCGAACCACAAACCTTTGCCATTGTTTTTTGTTTTTTTTTTTTTTTTTGTTTATAAGAGGAGGCATGTGTATATTTTCTTTGAATTGTTTTTTTGGATATTACCTAAAATTTTAGAACAATTTCTAAAATTACCAAAGTTAATGAAGTTAAGGGGAAAAAAGTACCCTCATCAAATAAAACAATATATCACACATAACAAATATATGTTGAGCACGCTGTATTAAATGGAGGAGATTCCAATTTTTTTTATAAGATTGTAGATTATTTATCGTATTAATTAATTTATATGAAATTAAAATTTAATACAAGATGGATAAACGGAATGAAGACGGACATTGGAAAATTGTAAACAGAGTGGAAGAAAAAGTAAAATATAAGTTTTAACCATAAATGTAATTTATTTACGATAATTTACTTTCTATTCATTTTCATTCAATGAAATAATTTACTGAATTTATGTACCTTTTTGTTGATTTTATTGTATTGTAAAATATTAAAATTAATTCACCTTTTTATTGAATAATTTTTTGTAAATACTAAATTATAAGTTTAGTTCAAAGAATTTAAGTTTTTTTTATTCCATAATTTTTTAGGTTTGTATTTATTAAGTTCTTCAATTTTAGGCATGTTTAAAAAAAATAAAAAATTAAATGCATTTAATAAGTCTTTAAACTTTTGATTTTGTATTTAATAAATTTTTGAATTTTCACTTTTAAGTTATTGATTTATTGAAATCTATTCAGTATTAAATACAAAATAAGTGACGGTAGTAGGGGTGTTCATTGGTCGGTCGGTGTCGTTTCCGATGAAAAGTAACATCGAACAGACCTATCGGTTTCCTAAAAACTGAAATTGACACCGACCAGTCGGCCAATTCTGTTAAAATCGGTTAAATTCAGTTAATTAATATGATTTTTTTGTAGTTTTTATTAAAAAAAATATATATTCATCATACAATTTTATAATGAAAATTTGAGAATTAATTTTGAAAAATGAGCATATAGAATAATTTTCGGAAACACATTTAAATTTAAGTTAATTTTGCAATAATTTAATAAGAAATATATTTAATTATATGAAAATATCAATATTTTATAAAAAGAAATCTTCGGTTGATTAACCAAACCGACCGACTTAACTGAATTTTTTTTAGTTAAATTGTTTTGTAATCGATACCGATCGAAACAAGCTTGAAAACCGATCGACCGACCGATTCTAATTCGATCGGTTTGGTCGGTTGGATCGGTTTTCGGAGAATGTATGAACATCCCTAAACGGTAGTATTCCAATAATATTATTTATTACTTAATAATCAGTTTGTTACCATTTTAAATCTCAAATGTGGTTAAATTTTTAAAAACATACAAAAATAAGTGATTTAAGGTTGAGTAGACAAAATTAAGAATTTGAGAACAGTGACACAAATCTAAACTTACATTTGGTATTTTCTTTGAATATAAATTTCATTCGGATTGATTTCAGGAAAGAAACAACAATATTAAAGAAAAAATAATCTTGGAAACGGTTAAACACTCAAACTCGCCAAAGAAATCTGCCGATCAAAGTCAATCAAGGTTCTCACTAACTCGAAAACTCGAGTCATTTCGGTCGGGCCGGTTAACCCAAACAGCATCACCATCGGTAAAAGAGGTTCAGAAATCCACTACCCTATCACACTCCTTCTCATTCGTTCCACCAAACCCGACCTCGCACGAGCCGGGTCCAGGAACAGTGGGAAGCAATCGAGTCGGGTTGAACAACAACAACATGAGCAAAAACTACGGACCGGTGGCGGGCATGTCGATTTTGATAATGACATTGGCGATCATGATGTTGTGGGGAAAATTATATGCAATTTTTTGCACGGCAACGTGGATTTATATTGTTACGAGCTTAAGGTCAATTGTTGAAGATGATGATGCAATTGATTTTAATGAATCGGATTCGTGTTCTCAAGGGTTTAAGAATAAATTATTGTTTTTTAAAGGGTTTCTTTGTAGAAACAGAGAGAAAAGTTGTTGA

mRNA sequence

ATGGCCAAATCCCCAAATTCCAAATCCAAGCCCCACCATTTTCTCAGCTGCTTTGGATTTTCCGGCAAATTCCGCCGCTTTAAGTCCATCAAACCCGCCGCCGCTCATAAAAAGCGCCCGTTTTCTTGGATAAAGCTCCACTTCAAGCCTCGCCCTACTTTTCCGACCGAACCGAACCGGTTTAATCCGGATTCTGACCGGCCCGCCTTGAAATCTGTTACTCCGGCCGCCGGTTGTAAGTCATCGAATGAAGATTTTGCTGTTATGTTGCCGGCGGCGACAAATCAGTCCGGCGAGGAGAGACTGGTAGAGGAAAGAAACAACAATATTAAAGAAAAAATAATCTTGGAAACGGTTAAACACTCAAACTCGCCAAAGAAATCTGCCGATCAAAGTCAATCAAGGTTCTCACTAACTCGAAAACTCGAGTCATTTCGGTCGGGCCGGTTAACCCAAACAGCATCACCATCGGTAAAAGAGGTTCAGAAATCCACTACCCTATCACACTCCTTCTCATTCGTTCCACCAAACCCGACCTCGCACGAGCCGGGTCCAGGAACAGTGGGAAGCAATCGAGTCGGGTTGAACAACAACAACATGAGCAAAAACTACGGACCGGTGGCGGGCATGTCGATTTTGATAATGACATTGGCGATCATGATGTTGTGGGGAAAATTATATGCAATTTTTTGCACGGCAACGTGGATTTATATTGTTACGAGCTTAAGGTCAATTGTTGAAGATGATGATGCAATTGATTTTAATGAATCGGATTCGTGTTCTCAAGGGTTTAAGAATAAATTATTGTTTTTTAAAGGGTTTCTTTGTAGAAACAGAGAGAAAAGTTGTTGA

Coding sequence (CDS)

ATGGCCAAATCCCCAAATTCCAAATCCAAGCCCCACCATTTTCTCAGCTGCTTTGGATTTTCCGGCAAATTCCGCCGCTTTAAGTCCATCAAACCCGCCGCCGCTCATAAAAAGCGCCCGTTTTCTTGGATAAAGCTCCACTTCAAGCCTCGCCCTACTTTTCCGACCGAACCGAACCGGTTTAATCCGGATTCTGACCGGCCCGCCTTGAAATCTGTTACTCCGGCCGCCGGTTGTAAGTCATCGAATGAAGATTTTGCTGTTATGTTGCCGGCGGCGACAAATCAGTCCGGCGAGGAGAGACTGGTAGAGGAAAGAAACAACAATATTAAAGAAAAAATAATCTTGGAAACGGTTAAACACTCAAACTCGCCAAAGAAATCTGCCGATCAAAGTCAATCAAGGTTCTCACTAACTCGAAAACTCGAGTCATTTCGGTCGGGCCGGTTAACCCAAACAGCATCACCATCGGTAAAAGAGGTTCAGAAATCCACTACCCTATCACACTCCTTCTCATTCGTTCCACCAAACCCGACCTCGCACGAGCCGGGTCCAGGAACAGTGGGAAGCAATCGAGTCGGGTTGAACAACAACAACATGAGCAAAAACTACGGACCGGTGGCGGGCATGTCGATTTTGATAATGACATTGGCGATCATGATGTTGTGGGGAAAATTATATGCAATTTTTTGCACGGCAACGTGGATTTATATTGTTACGAGCTTAAGGTCAATTGTTGAAGATGATGATGCAATTGATTTTAATGAATCGGATTCGTGTTCTCAAGGGTTTAAGAATAAATTATTGTTTTTTAAAGGGTTTCTTTGTAGAAACAGAGAGAAAAGTTGTTGA

Protein sequence

MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPTEPNRFNPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEERLVEERNNNIKEKIILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKSTTLSHSFSFVPPNPTSHEPGPGTVGSNRVGLNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIFCTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKSC
Homology
BLAST of Sed0004092.1 vs. NCBI nr
Match: XP_038897219.1 (uncharacterized protein LOC120085350 isoform X1 [Benincasa hispida])

HSP 1 Score: 289.7 bits (740), Expect = 2.8e-74
Identity = 167/294 (56.80%), Postives = 206/294 (70.07%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRP----TFPT 60
           MAKS NSKSKPH FLSCFGFSGK RRFK +K +A  +KRPFSW+  H KP P    + P 
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSGKLRRFKPLKSSAGQRKRPFSWMSFHSKPPPPVHSSLPV 60

Query: 61  EPNRFNPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEERLV---EERNNNIKEK 120
           + NR  PDSDR +  S+ P A  KSSNEDFAV +   TN++G+E ++   E +N+ I EK
Sbjct: 61  QINRSIPDSDRLSSISIAPTATSKSSNEDFAVAVSVVTNRTGDELIIGQQEVKNDIIAEK 120

Query: 121 IILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASP--SVKEVQ-KSTTLSHS 180
           II E+ + SNS KK ADQSQSRFSLT+KLESFRS R TQ ASP  ++K    K+ T+SHS
Sbjct: 121 IIKESCEQSNSRKKPADQSQSRFSLTKKLESFRSVRFTQPASPKKNLKSTNLKTPTISHS 180

Query: 181 FSFVPPNPTSHEPGPGTVGSNRVGLNNNN--MSKNYGPVAGMSILIMTLAIMMLWGKLYA 240
            SF PPNP          GS R GL + N   S+ Y   A +S+L+MTLA+M+LWG++ A
Sbjct: 181 LSFPPPNPARRNRNNEWPGSKRDGLKSKNGETSQRYRSAAAVSVLMMTLAMMVLWGRICA 240

Query: 241 IFCTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
           I CTATWI+IVTSLR+IVE+ D IDF ESDS S+GFK KL+  KGFLCRN  ++
Sbjct: 241 ILCTATWIFIVTSLRTIVEECDTIDFVESDSYSEGFKKKLVVLKGFLCRNHREN 294

BLAST of Sed0004092.1 vs. NCBI nr
Match: XP_023549176.1 (uncharacterized protein LOC111807611 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 5.1e-68
Identity = 163/290 (56.21%), Postives = 200/290 (68.97%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPT-EPN 60
           MAKSPNSKS PH FL CFGFSGK RRFK +KPAAAH+K P SW++ H K  P  P+   N
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSVHFN 60

Query: 61  RFNPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEE---RLVEERNNNIKEKIIL 120
             N DSDR + KS+ PAA   +SNEDF V +P ATN+SGEE   R    +N+ + EKII 
Sbjct: 61  LSNTDSDRLSSKSIAPAAAF-NSNEDFTVAVPVATNRSGEEIVTRPENVKNDILPEKIIR 120

Query: 121 ETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKSTTL-SHSFSFVP 180
           E+ +  NSPKK + +S+SRFSLTRKLESFRSGR  Q ASP+ K+  KST L S + S  P
Sbjct: 121 ESCEQWNSPKKPSARSESRFSLTRKLESFRSGRFAQPASPTAKKNLKSTNLQSPTISLNP 180

Query: 181 PNPTS-HEPGPGTVGSNRVGL--NNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIFCT 240
           P      EP    + S R+GL  NN    + Y  +AGMSIL++TL IM++WG+L AI CT
Sbjct: 181 PRINQVKEP----LASMRIGLKPNNGETRQRYQSMAGMSILMITLVIMVVWGRLCAILCT 240

Query: 241 ATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
           A WI +VTSLRSIVED D + F ESDS S+GFK KL+  KGFLCRN+ ++
Sbjct: 241 AAWIVMVTSLRSIVEDYDTLQFFESDSYSEGFKKKLVVLKGFLCRNQTQN 285

BLAST of Sed0004092.1 vs. NCBI nr
Match: XP_022954035.1 (uncharacterized protein LOC111456417 [Cucurbita moschata])

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-66
Identity = 159/292 (54.45%), Postives = 200/292 (68.49%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPTEPNR 60
           MAKSPNSKS PH FL CFGFSGK RRFK +KPAAAH+K P SW++ H K  P  P+   +
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSPSVQ 60

Query: 61  F---NPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEE---RLVEERNNNIKEKI 120
           F   N DSDR + KS++P A   +SNEDF V +P ATN++G E   R    +N+ + EKI
Sbjct: 61  FNLSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEKI 120

Query: 121 ILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKSTTL-SHSFSF 180
           I E+ +  NSPKK + +S+SRFSLTRKLESFRSGR  Q ASP+ K+  KST+L S + S 
Sbjct: 121 IRESCEQWNSPKKPSARSESRFSLTRKLESFRSGRFAQPASPTTKKNLKSTSLHSPTISL 180

Query: 181 VPPNPTS-HEPGPGTVGSNRVGL--NNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIF 240
            PP      EP    + S RVGL  NN    + Y  +AGMSIL++TL IM+ WG+L AI 
Sbjct: 181 HPPRINQVKEP----LASMRVGLKPNNGETRQRYQSMAGMSILMITLVIMVAWGRLCAIL 240

Query: 241 CTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
           CTA WI +VTSLRSI+ED D + F ESDS S+GFK KL+  KGF+CRN+ ++
Sbjct: 241 CTAAWIVMVTSLRSIIEDYDTVQFFESDSYSEGFKKKLVVLKGFVCRNQTQN 287

BLAST of Sed0004092.1 vs. NCBI nr
Match: XP_008461362.1 (PREDICTED: uncharacterized protein At5g23160 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 2.8e-66
Identity = 157/293 (53.58%), Postives = 193/293 (65.87%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPTEPNR 60
           MAKS NSKSKPH FLSCFGFS K RRFK  K  A H+KRPFSW +    P P   + P+ 
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSDKLRRFKPPKSPAGHRKRPFSWFRNSKPPTPVHSSFPSH 60

Query: 61  FNP---DSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEERLV---EERNNNIKEKI 120
            NP   +SDR +  S+ P A  KSSNED AV +P AT ++G+E ++   E +N+ + EK 
Sbjct: 61  TNPSVTNSDRLSSVSIAPTATSKSSNEDLAVAVPVATKRTGQEVIIGPHEVKNDIVAEKT 120

Query: 121 ILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKST-----TLSH 180
           I E+ +HSN P K  DQSQSRFSLT+KLESFR  R TQTASP  K+  KST     T+SH
Sbjct: 121 IHESCEHSNLPNKFIDQSQSRFSLTKKLESFRLVRFTQTASP--KKNPKSTNLQRPTISH 180

Query: 181 SFSFVPPNPTSHEPGPGTVGSNRVG--LNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLY 240
           S SF PP P           S + G    N   S+ Y     MS+L+MTLA+M+LWG++ 
Sbjct: 181 SLSFPPPKPAPLNKVSEPSRSKQFGSMSANRKSSQRYRSAVAMSVLMMTLAMMVLWGRIC 240

Query: 241 AIFCTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNRE 281
           AI CTATWI++VTSLRSIVE+ D IDF ESDS S+GFK KL+  KGF+CRN +
Sbjct: 241 AILCTATWIFVVTSLRSIVEEYDRIDFVESDSYSEGFKKKLVVLKGFMCRNHK 291

BLAST of Sed0004092.1 vs. NCBI nr
Match: XP_022991489.1 (uncharacterized protein LOC111488090 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 7.7e-64
Identity = 152/287 (52.96%), Postives = 195/287 (67.94%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPT-EPN 60
           MAKSPNSKS PH FL CFGFSGK RRFK +KPAAAH+K P SW++ H K  P  P+ + N
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSVQFN 60

Query: 61  RFNPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEE---RLVEERNNNIKEKIIL 120
             N DSDR + KS++P A   +SNEDF V +P ATN++G E   R    +N+ + EKII 
Sbjct: 61  LSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEKIIR 120

Query: 121 ETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKSTTL-SHSFSFVP 180
           E  +  NSPKK + +S+SRFS TRKLESFRSGR  Q  SP+ K+  KST L S + S   
Sbjct: 121 ENCEQLNSPKKLSARSESRFSFTRKLESFRSGRFAQPVSPTTKKNLKSTNLQSPTISLNL 180

Query: 181 PNPTSHEPGPGTVGSNRVGLNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIFCTATW 240
           P     +    ++   R+  NN+ M + Y  +AGMSIL++TL IM++WG+L AI CTA W
Sbjct: 181 PRINQVKESMASM-QVRLKPNNSEMKQRYRSMAGMSILMITLVIMIVWGRLCAILCTAAW 240

Query: 241 IYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
           I +VTSLRSIVED D + F +SDS S+GFK KL+  KGFLCRN+ ++
Sbjct: 241 IVMVTSLRSIVEDYDTLQFFKSDSYSEGFKKKLVVLKGFLCRNQTQN 285

BLAST of Sed0004092.1 vs. ExPASy Swiss-Prot
Match: Q9FMY4 (Uncharacterized protein At5g23160 OS=Arabidopsis thaliana OX=3702 GN=At5g23160 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 206 PVAGMSILIMTLAIMMLWGKLYAIFCTATWIYIVTSLR 244
           PV G+SI+++TL IM+ WG+L AI CT+TW YI   L+
Sbjct: 181 PVIGISIIMLTLMIMLTWGRLCAILCTSTWCYIFPRLK 218

BLAST of Sed0004092.1 vs. ExPASy TrEMBL
Match: A0A6J1GRB9 (uncharacterized protein LOC111456417 OS=Cucurbita moschata OX=3662 GN=LOC111456417 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 159/292 (54.45%), Postives = 200/292 (68.49%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPTEPNR 60
           MAKSPNSKS PH FL CFGFSGK RRFK +KPAAAH+K P SW++ H K  P  P+   +
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSPSVQ 60

Query: 61  F---NPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEE---RLVEERNNNIKEKI 120
           F   N DSDR + KS++P A   +SNEDF V +P ATN++G E   R    +N+ + EKI
Sbjct: 61  FNLSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEKI 120

Query: 121 ILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKSTTL-SHSFSF 180
           I E+ +  NSPKK + +S+SRFSLTRKLESFRSGR  Q ASP+ K+  KST+L S + S 
Sbjct: 121 IRESCEQWNSPKKPSARSESRFSLTRKLESFRSGRFAQPASPTTKKNLKSTSLHSPTISL 180

Query: 181 VPPNPTS-HEPGPGTVGSNRVGL--NNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIF 240
            PP      EP    + S RVGL  NN    + Y  +AGMSIL++TL IM+ WG+L AI 
Sbjct: 181 HPPRINQVKEP----LASMRVGLKPNNGETRQRYQSMAGMSILMITLVIMVAWGRLCAIL 240

Query: 241 CTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
           CTA WI +VTSLRSI+ED D + F ESDS S+GFK KL+  KGF+CRN+ ++
Sbjct: 241 CTAAWIVMVTSLRSIIEDYDTVQFFESDSYSEGFKKKLVVLKGFVCRNQTQN 287

BLAST of Sed0004092.1 vs. ExPASy TrEMBL
Match: A0A1S3CFR9 (uncharacterized protein At5g23160 OS=Cucumis melo OX=3656 GN=LOC103499966 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 157/293 (53.58%), Postives = 193/293 (65.87%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPTEPNR 60
           MAKS NSKSKPH FLSCFGFS K RRFK  K  A H+KRPFSW +    P P   + P+ 
Sbjct: 1   MAKSSNSKSKPHFFLSCFGFSDKLRRFKPPKSPAGHRKRPFSWFRNSKPPTPVHSSFPSH 60

Query: 61  FNP---DSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEERLV---EERNNNIKEKI 120
            NP   +SDR +  S+ P A  KSSNED AV +P AT ++G+E ++   E +N+ + EK 
Sbjct: 61  TNPSVTNSDRLSSVSIAPTATSKSSNEDLAVAVPVATKRTGQEVIIGPHEVKNDIVAEKT 120

Query: 121 ILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKST-----TLSH 180
           I E+ +HSN P K  DQSQSRFSLT+KLESFR  R TQTASP  K+  KST     T+SH
Sbjct: 121 IHESCEHSNLPNKFIDQSQSRFSLTKKLESFRLVRFTQTASP--KKNPKSTNLQRPTISH 180

Query: 181 SFSFVPPNPTSHEPGPGTVGSNRVG--LNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLY 240
           S SF PP P           S + G    N   S+ Y     MS+L+MTLA+M+LWG++ 
Sbjct: 181 SLSFPPPKPAPLNKVSEPSRSKQFGSMSANRKSSQRYRSAVAMSVLMMTLAMMVLWGRIC 240

Query: 241 AIFCTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNRE 281
           AI CTATWI++VTSLRSIVE+ D IDF ESDS S+GFK KL+  KGF+CRN +
Sbjct: 241 AILCTATWIFVVTSLRSIVEEYDRIDFVESDSYSEGFKKKLVVLKGFMCRNHK 291

BLAST of Sed0004092.1 vs. ExPASy TrEMBL
Match: A0A6J1JV00 (uncharacterized protein LOC111488090 OS=Cucurbita maxima OX=3661 GN=LOC111488090 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.7e-64
Identity = 152/287 (52.96%), Postives = 195/287 (67.94%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPT-EPN 60
           MAKSPNSKS PH FL CFGFSGK RRFK +KPAAAH+K P SW++ H K  P  P+ + N
Sbjct: 1   MAKSPNSKSNPHPFLCCFGFSGKHRRFKPLKPAAAHRKGPISWMRFHSKQPPPSPSVQFN 60

Query: 61  RFNPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEE---RLVEERNNNIKEKIIL 120
             N DSDR + KS++P A   +SNEDF V +P ATN++G E   R    +N+ + EKII 
Sbjct: 61  LSNTDSDRLSSKSISPTAAF-NSNEDFTVAVPVATNRAGGEIVTRPENVKNDILPEKIIR 120

Query: 121 ETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKSTTL-SHSFSFVP 180
           E  +  NSPKK + +S+SRFS TRKLESFRSGR  Q  SP+ K+  KST L S + S   
Sbjct: 121 ENCEQLNSPKKLSARSESRFSFTRKLESFRSGRFAQPVSPTTKKNLKSTNLQSPTISLNL 180

Query: 181 PNPTSHEPGPGTVGSNRVGLNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIFCTATW 240
           P     +    ++   R+  NN+ M + Y  +AGMSIL++TL IM++WG+L AI CTA W
Sbjct: 181 PRINQVKESMASM-QVRLKPNNSEMKQRYRSMAGMSILMITLVIMIVWGRLCAILCTAAW 240

Query: 241 IYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
           I +VTSLRSIVED D + F +SDS S+GFK KL+  KGFLCRN+ ++
Sbjct: 241 IVMVTSLRSIVEDYDTLQFFKSDSYSEGFKKKLVVLKGFLCRNQTQN 285

BLAST of Sed0004092.1 vs. ExPASy TrEMBL
Match: A0A0A0K6H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420760 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.4e-63
Identity = 153/292 (52.40%), Postives = 191/292 (65.41%), Query Frame = 0

Query: 1   MAKSPNSKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRP----TFPT 60
           MAKS NSKSKPH FL CFG+S K  RFK +K  A H+KR FSW +    P P    +FP+
Sbjct: 1   MAKSSNSKSKPHFFLCCFGYSDKLPRFKPLKSPAGHRKRQFSWFRNSKPPTPLHSSSFPS 60

Query: 61  EPNRFNPDSDRPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEERLV---EERNNNIKEK 120
             NR   +SDR +  S+ P A   SSNED AV  P ATN++GEE ++   E +N+ +  K
Sbjct: 61  HTNRSVTNSDRLSSVSIAPTATTNSSNEDLAV--PVATNRTGEEVIISPHEVKNDTVAGK 120

Query: 121 IILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTASP--SVKEVQKST-TLSHS 180
            I  + +HSNSP K  DQSQSRFSLT++LESFRS R  QTA P  + K +   T T+SHS
Sbjct: 121 TIHGSSEHSNSPNKPIDQSQSRFSLTKRLESFRSIRFNQTAPPKKNTKSINVQTPTISHS 180

Query: 181 FSFVPPNPTSHEPGPGTVGSNRV--GLNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYA 240
            SF PP PT          S RV     N   S+ Y  VA MS+L+MTLA+M++WG++ A
Sbjct: 181 LSFPPPKPTPSNRVSELRESKRVCSKSKNRKSSQQYRSVAAMSVLMMTLAMMVVWGRICA 240

Query: 241 IFCTATWIYIVTSLRSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNRE 281
           I CTATWI+IVTSLRSIVE+ + IDF ESDS S+GFK KL+  KGF+CRN +
Sbjct: 241 ILCTATWIFIVTSLRSIVEEYEGIDFVESDSYSEGFKKKLVVLKGFVCRNHK 290

BLAST of Sed0004092.1 vs. ExPASy TrEMBL
Match: A0A6J1DHG8 (uncharacterized protein LOC111020508 OS=Momordica charantia OX=3673 GN=LOC111020508 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 5.7e-57
Identity = 140/280 (50.00%), Postives = 179/280 (63.93%), Query Frame = 0

Query: 7   SKSKPHHFLSCFGFSGKFRRFKSIKPAAAHKKRPFSWIKLHFKPRPTFPTEPNRFNPDSD 66
           +KSKP   L CFGFSGK RR K +KPAAAH KRPFSW++ H KP        +R NPDSD
Sbjct: 2   AKSKP-QLLCCFGFSGKLRRSKPLKPAAAHTKRPFSWMRFHAKPPVRSALLADRSNPDSD 61

Query: 67  RPALKSVTPAAGCKSSNEDFAVMLPAATNQSGEERLVEERNNNIKEKIILETVKHSNSPK 126
           R A  S+      K  +ED A + P A NQ+GE R  +  N ++ E+IILET  HS++PK
Sbjct: 62  RLAPGSLASTTVYKPPSEDLAAVEPPAMNQAGEGRPEKVGNEDVVEEIILETRGHSDTPK 121

Query: 127 KSADQSQSRFSLTRKLESFRSGRLTQTASPSVKEVQKST----TLSHSFSFVPPNPTSHE 186
           K   +SQ+RFSLTR+LESFRSGR T+  SP+ ++   +T     +S S SF   NPT   
Sbjct: 122 KPVGESQTRFSLTRRLESFRSGRFTKPVSPTARKDPITTNPVPAISKSLSFPALNPTRRV 181

Query: 187 PGPGTVGSNRVGLNNNNMSKNYGPVAGMSILIMTLAIMMLWGKLYAIFCTATWIYIVTSL 246
                  S RVGL+ + MSK Y   A +SI I+TL+IM+LWG++ AI  TA WI IV SL
Sbjct: 182 QVESPPTSMRVGLDGDEMSKKYRSAAAISIFIVTLSIMILWGRMCAILSTAAWILIVASL 241

Query: 247 RSIVEDDDAIDFNESDSCSQGFKNKLLFFKGFLCRNREKS 283
            SIVE+DD  DF  SDS S+G K KL+  KGFL R++ ++
Sbjct: 242 ESIVEEDDENDFIGSDSYSEGLKKKLVILKGFLYRSQREN 280

BLAST of Sed0004092.1 vs. TAIR 10
Match: AT5G23160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G08240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0

Query: 206 PVAGMSILIMTLAIMMLWGKLYAIFCTATWIYIVTSLR 244
           PV G+SI+++TL IM+ WG+L AI CT+TW YI   L+
Sbjct: 181 PVIGISIIMLTLMIMLTWGRLCAILCTSTWCYIFPRLK 218

BLAST of Sed0004092.1 vs. TAIR 10
Match: AT5G08240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 5.0e-05
Identity = 51/195 (26.15%), Postives = 88/195 (45.13%), Query Frame = 0

Query: 106 RNNNIKEKIILETVKHSNSPKKSADQSQSRFSLTRKLESFRSGRLTQTA-SPSVKEVQ-- 165
           +N+ IK   I ET K ++  +   D  Q   S+ R++   ++  +   A +   KE +  
Sbjct: 63  KNSEIKPSPIEETEKPTSRVEDETDDKQKPLSVIRRITDRKNIPVDDKAMNQETKETKPK 122

Query: 166 --KSTTLSHSFSFVPPNPTSHEPGPGTVG--SNRVG--------LNNNNMSKNYGPVAGM 225
             +  T   S    P      +     +   S+R G          N +  K + PV G+
Sbjct: 123 DLRDITPDRSKPIEPLGSFKEDTCTERISSISSRYGKPDLKPTRSRNGSRVKPFDPVIGI 182

Query: 226 SILIMTLAIMMLWGKLYAIFCTATWIYIVTSLR---SIVEDDDAIDFNESDSCSQGFKNK 283
           SI+I+TL IM++WG+L AI CT+ W Y++  +R   ++ +       +  D  S+ +K K
Sbjct: 183 SIIILTLMIMLVWGRLCAILCTSAWCYVLPRVRDAAALAKRKRNGSASVPDLNSESYKRK 242

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038897219.12.8e-7456.80uncharacterized protein LOC120085350 isoform X1 [Benincasa hispida][more]
XP_023549176.15.1e-6856.21uncharacterized protein LOC111807611 [Cucurbita pepo subsp. pepo][more]
XP_022954035.12.2e-6654.45uncharacterized protein LOC111456417 [Cucurbita moschata][more]
XP_008461362.12.8e-6653.58PREDICTED: uncharacterized protein At5g23160 [Cucumis melo][more]
XP_022991489.17.7e-6452.96uncharacterized protein LOC111488090 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9FMY42.4e-0455.26Uncharacterized protein At5g23160 OS=Arabidopsis thaliana OX=3702 GN=At5g23160 P... [more]
Match NameE-valueIdentityDescription
A0A6J1GRB91.0e-6654.45uncharacterized protein LOC111456417 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
A0A1S3CFR91.4e-6653.58uncharacterized protein At5g23160 OS=Cucumis melo OX=3656 GN=LOC103499966 PE=4 S... [more]
A0A6J1JV003.7e-6452.96uncharacterized protein LOC111488090 OS=Cucurbita maxima OX=3661 GN=LOC111488090... [more]
A0A0A0K6H32.4e-6352.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420760 PE=4 SV=1[more]
A0A6J1DHG85.7e-5750.00uncharacterized protein LOC111020508 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
Match NameE-valueIdentityDescription
AT5G23160.11.7e-0555.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G08240.15.0e-0526.15unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..78
NoneNo IPR availablePANTHERPTHR34379:SF3PROTEIN, PUTATIVE-RELATEDcoord: 3..279
IPR040411Uncharacterized protein At5g23160-likePANTHERPTHR34379OS07G0553800 PROTEINcoord: 3..279

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0004092Sed0004092gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0004092.1-exonSed0004092.1-exon-LG07:4571559..4572098exon
Sed0004092.1-exonSed0004092.1-exon-LG07:4573640..4573951exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0004092.1-cdsSed0004092.1-cds-LG07:4571559..4572098CDS
Sed0004092.1-cdsSed0004092.1-cds-LG07:4573640..4573951CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0004092.1Sed0004092.1-proteinpolypeptide