Sed0004032.1 (mRNA) Chayote v1

Overview


Name	Sed0004032.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	phylloplanin-like
Location	LG12: 5038276 .. 5039776 (+)
Sequence length	661
RNA-Seq Expression	Sed0004032.1
Synteny	Sed0004032.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAATAGAAATTAATATTTAAAAAAATGGGTTTGAAATCAGTTCTGATTGTTTTGGTGATATTGGTTGCTGCTGTGGGAGCTCCATTAATGGTGGAAGCTCAGCTTGAAAATATTATTGGCAGTATCTTTTTTGGCGTTACCAACATTCGAGGAACTGTCTTTTGCACTGCAAATGGCAATATGGGTACCAATGGCACTGCCACTCCTATTTTCCCAAGTATGCCATTTTTATGTTACATTTTTATATTTTTAGTCCCTGATTTTTTTTTAAAAAAATATTTTAAATTGCATGAACATGTTTACTTGAATTATAAGACACCAAATTTAAAAATATGGTTTAAGATGATCCAAGTTCAATGACAAAAATTATAATGTGATTATATTTATAATTGCATTTCAAAAACTTTTGAGTAGAAAGTAAGACTTAGGAACCATTTGAATTTTAGTTTTAATTTTTTTTTTTTTTATGAGGTTTATCTTTGAAAAGTTTTTGAATTTTAACCAAATTTTAAAAATAAAACGAAGTTTGGAAGCTACTTTTTATTTTTTGTTTTAAAATTTTAGTTTTTAAAAATATTAGTATATAGATTTTTTTTTTGTATTTTTTGAAATAAAATGAACACTTCATAAAATCAAACATTACAACGTAGTCTCTTGATTGAGGAAGAACCACTAACGAGTTACATATAAATATTAATACAAGAAAAATTATACGATGTGCTCAAAATTTGTATGGTGTAATGATAATTGCAGATATAAATTTTCAAAAATAAAAAACGAAATGATTATAGTAAAGGTCGTAGTGTTTGTTTTCTTGTCACTAACTATTCAATTTACTTTTATAAAAATGATCTAGTATTCATCTCATCTGCATTGCTCCAAGAGAAAAAAGAAAACAATGACACTTTATCCTAATGTTCAAATGTAACAACTTGTATTATAACTAAGTTTATAGTTTACTTCCATTATCGTTTATTTGAATCACTATTCACATGTTCATGATCTCAAGATATATTTCCTTAATATATACATCAAACAACTTTGCATCAAATTCCAGATGCAGCCGTGCAATTGCAGTGCGGAGATAAAAATATTGTGTCCACGACAACGACAAACAATATGGGACTCTTTTCGATTATTTTGAATCCTTTACAATTTCTTCTTTCTTCACTCTTGAGCAACTGCAGCGTCGCAGTGAACACACCGCTGTCAAACTGCGACGTCACGTTGCCGTCTTCTGGGAGACTGGTTTCGCCATTGACGTTCGCTGGAGACACGATACAAGGCCTCCTCAGGATCATCAACGTCGTCCCCCTCGAGTTCCAGTTCATTGGCTAAATATATTTACAAGAGTGATGGAATACCAAGTAGTATTTGAATTATATTACTTTTAATGTGTCTGTTTGTTGTGAGTTTTCTTGTTGTTTGTTGTTGTCAATTCCAAAAATAAAGGTTTGTGTATGCTTCTAGTTGTTCTTGTATCTATTTTAAAGTGGGG

mRNA sequence

AGAGAATAGAAATTAATATTTAAAAAAATGGGTTTGAAATCAGTTCTGATTGTTTTGGTGATATTGGTTGCTGCTGTGGGAGCTCCATTAATGGTGGAAGCTCAGCTTGAAAATATTATTGGCAGTATCTTTTTTGGCGTTACCAACATTCGAGGAACTGTCTTTTGCACTGCAAATGGCAATATGGGTACCAATGGCACTGCCACTCCTATTTTCCCAAATGCAGCCGTGCAATTGCAGTGCGGAGATAAAAATATTGTGTCCACGACAACGACAAACAATATGGGACTCTTTTCGATTATTTTGAATCCTTTACAATTTCTTCTTTCTTCACTCTTGAGCAACTGCAGCGTCGCAGTGAACACACCGCTGTCAAACTGCGACGTCACGTTGCCGTCTTCTGGGAGACTGGTTTCGCCATTGACGTTCGCTGGAGACACGATACAAGGCCTCCTCAGGATCATCAACGTCGTCCCCCTCGAGTTCCAGTTCATTGGCTAAATATATTTACAAGAGTGATGGAATACCAAGTAGTATTTGAATTATATTACTTTTAATGTGTCTGTTTGTTGTGAGTTTTCTTGTTGTTTGTTGTTGTCAATTCCAAAAATAAAGGTTTGTGTATGCTTCTAGTTGTTCTTGTATCTATTTTAAAGTGGGG

Coding sequence (CDS)

ATGGGTTTGAAATCAGTTCTGATTGTTTTGGTGATATTGGTTGCTGCTGTGGGAGCTCCATTAATGGTGGAAGCTCAGCTTGAAAATATTATTGGCAGTATCTTTTTTGGCGTTACCAACATTCGAGGAACTGTCTTTTGCACTGCAAATGGCAATATGGGTACCAATGGCACTGCCACTCCTATTTTCCCAAATGCAGCCGTGCAATTGCAGTGCGGAGATAAAAATATTGTGTCCACGACAACGACAAACAATATGGGACTCTTTTCGATTATTTTGAATCCTTTACAATTTCTTCTTTCTTCACTCTTGAGCAACTGCAGCGTCGCAGTGAACACACCGCTGTCAAACTGCGACGTCACGTTGCCGTCTTCTGGGAGACTGGTTTCGCCATTGACGTTCGCTGGAGACACGATACAAGGCCTCCTCAGGATCATCAACGTCGTCCCCCTCGAGTTCCAGTTCATTGGCTAA

Protein sequence

MGLKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTATPIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDVTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQFIG

Homology

[Close]

BLAST of Sed0004032.1 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 2.5e-48
Identity = 111/156 (71.15%), Postives = 132/156 (84.62%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTAT 60
           MGLKSVL VLVI V A+GAPLMVEAQL  I+GS+  G+  I+GTVFCTANGN+G NGTAT
Sbjct: 1   MGLKSVLFVLVI-VGAMGAPLMVEAQL-GIVGSL-LGLIRIQGTVFCTANGNIGINGTAT 60

Query: 61  PIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDV 120
           PIFPNA+VQLQCG+ NIVSTTTTNNMG+FSI+LNPLQFLLS + S+CS  VNTPLSNC+V
Sbjct: 61  PIFPNASVQLQCGNGNIVSTTTTNNMGVFSILLNPLQFLLSLITSSCSTVVNTPLSNCNV 120

Query: 121 TLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQFI 157
           TLPS+G L+S L F G T++G+L I+NV P  F+F+
Sbjct: 121 TLPSTGVLLSRLGFVGQTMEGILNILNVAPNGFEFL 153

[Close]

BLAST of Sed0004032.1 vs. NCBI nr
Match: XP_022137816.1 (phylloplanin-like [Momordica charantia])

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-46
Identity = 104/156 (66.67%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTAT 60
           MGL+SVL+VLV + AAVGAPLMVEAQL  IIGS+  G+  I+GTVFCTANGN+G NGTAT
Sbjct: 1   MGLRSVLLVLV-MAAAVGAPLMVEAQL-GIIGSL-LGLIRIQGTVFCTANGNIGINGTAT 60

Query: 61  PIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDV 120
           P+FPNAAVQ++CGD N+VS+ TTNNMG+FSI+L+PLQF+LSS+L+NC+V V TPLSNC+ 
Sbjct: 61  PVFPNAAVQMECGDGNVVSSVTTNNMGIFSILLDPLQFILSSVLNNCNVVVKTPLSNCNA 120

Query: 121 TLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQFI 157
           +LPS+G L+S L F    +QGLL I+N+VP  FQ +
Sbjct: 121 SLPSTGSLLSRLQFVSKKLQGLLSIVNLVPSGFQLL 153

[Close]

BLAST of Sed0004032.1 vs. NCBI nr
Match: XP_023522114.1 (phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.4 bits (485), Expect = 5.8e-45
Identity = 109/156 (69.87%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLM-VEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTA 60
           MGLKSVL V V +VAA+GAPLM VEAQL + IGS+   +T I+GTVFCTANGN+GTNGTA
Sbjct: 1   MGLKSVLFVCV-MVAAMGAPLMVVEAQLGS-IGSL-LSLTRIQGTVFCTANGNIGTNGTA 60

Query: 61  TPIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCD 120
           TP FPNAAVQLQCG+ N+VST TTN+ G+FSI+L+PLQ LLSSL SNCSV VNTPLS+C+
Sbjct: 61  TPAFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSLTSNCSVVVNTPLSSCN 120

Query: 121 VTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQF 156
            TLPS G LVS L   G T QGLLRI N++P  F F
Sbjct: 121 ATLPSVGNLVSALNLVGMTFQGLLRITNIIPTGFMF 153

[Close]

BLAST of Sed0004032.1 vs. NCBI nr
Match: XP_022973793.1 (phylloplanin-like [Cucurbita maxima])

HSP 1 Score: 191.4 bits (485), Expect = 5.8e-45
Identity = 109/156 (69.87%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMV-EAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTA 60
           MGLKSVL VLV + AA+GAPLMV EAQL + IGS+   +T I+GTVFCTA+GN+G NGTA
Sbjct: 1   MGLKSVLFVLV-MAAAMGAPLMVAEAQLGS-IGSL-LSLTRIQGTVFCTADGNIGANGTA 60

Query: 61  TPIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCD 120
           TPIFPNAAVQLQCG+ N+VST TTN+ G+F I+LNPLQFLLSSL SNCSV VNTPLS+C+
Sbjct: 61  TPIFPNAAVQLQCGNGNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCN 120

Query: 121 VTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQF 156
            TLPS G LVS L FAG  +QGLL I N++P  F F
Sbjct: 121 ATLPSVGNLVSGLNFAGTILQGLLSITNIIPRGFTF 153

[Close]

BLAST of Sed0004032.1 vs. NCBI nr
Match: KAG6597529.1 (hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028986.1 hypothetical protein SDJN02_10169 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.5 bits (480), Expect = 2.2e-44
Identity = 108/156 (69.23%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLM-VEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTA 60
           MGLKSVL V V +VAA+GAPLM VEAQL + IGS+   +T I+GTVFCTANGN+GTNGTA
Sbjct: 1   MGLKSVLFVFV-MVAAMGAPLMVVEAQLGS-IGSL-LSLTRIQGTVFCTANGNIGTNGTA 60

Query: 61  TPIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCD 120
           TP FPNAAVQLQCG+ N+VST TTN+ G+FSI+L+PLQ LLSS+ SNCSV VNTPLS+C+
Sbjct: 61  TPAFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCN 120

Query: 121 VTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQF 156
            TLPS G LVS L   G T QGLLRI N++P  F F
Sbjct: 121 ATLPSVGNLVSALNLVGMTFQGLLRITNIIPTGFIF 153

[Close]

BLAST of Sed0004032.1 vs. ExPASy Swiss-Prot
Match: Q56S59 (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-16
Identity = 60/147 (40.82%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 3   LKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGT-NGTATP 62
           + S  I L+ L+AA+ A     A L   + S     T+I G VFC+ NGN+   NG +  
Sbjct: 1   MASAKIFLIFLLAALIATPAAFAILVPTLVS-----THISGLVFCSVNGNLDVINGLSPQ 60

Query: 63  IFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDVT 122
           +FPNA+VQL+CG  N++S+T TN  G FS+ +N    L      NC++ V TPLS C+ T
Sbjct: 61  VFPNASVQLRCGATNVISSTITNGSGAFSLAVNTFPLL------NCNLVVATPLSTCNAT 120

Query: 123 LPSSGRLVSPLTFAGDTI---QGLLRI 146
           L S GRL S L     T+    GL+R+
Sbjct: 121 LQSVGRLASSLRLVNITLGSGTGLIRV 136

[Close]

BLAST of Sed0004032.1 vs. ExPASy TrEMBL
Match: A0A6J1C7T1 (phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46
Identity = 104/156 (66.67%), Postives = 131/156 (83.97%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTAT 60
           MGL+SVL+VLV + AAVGAPLMVEAQL  IIGS+  G+  I+GTVFCTANGN+G NGTAT
Sbjct: 1   MGLRSVLLVLV-MAAAVGAPLMVEAQL-GIIGSL-LGLIRIQGTVFCTANGNIGINGTAT 60

Query: 61  PIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDV 120
           P+FPNAAVQ++CGD N+VS+ TTNNMG+FSI+L+PLQF+LSS+L+NC+V V TPLSNC+ 
Sbjct: 61  PVFPNAAVQMECGDGNVVSSVTTNNMGIFSILLDPLQFILSSVLNNCNVVVKTPLSNCNA 120

Query: 121 TLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQFI 157
           +LPS+G L+S L F    +QGLL I+N+VP  FQ +
Sbjct: 121 SLPSTGSLLSRLQFVSKKLQGLLSIVNLVPSGFQLL 153

[Close]

BLAST of Sed0004032.1 vs. ExPASy TrEMBL
Match: A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.8e-45
Identity = 109/156 (69.87%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMV-EAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTA 60
           MGLKSVL VLV + AA+GAPLMV EAQL + IGS+   +T I+GTVFCTA+GN+G NGTA
Sbjct: 1   MGLKSVLFVLV-MAAAMGAPLMVAEAQLGS-IGSL-LSLTRIQGTVFCTADGNIGANGTA 60

Query: 61  TPIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCD 120
           TPIFPNAAVQLQCG+ N+VST TTN+ G+F I+LNPLQFLLSSL SNCSV VNTPLS+C+
Sbjct: 61  TPIFPNAAVQLQCGNGNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCN 120

Query: 121 VTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQF 156
            TLPS G LVS L FAG  +QGLL I N++P  F F
Sbjct: 121 ATLPSVGNLVSGLNFAGTILQGLLSITNIIPRGFTF 153

[Close]

BLAST of Sed0004032.1 vs. ExPASy TrEMBL
Match: A0A6J1FBV3 (phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.8e-44
Identity = 107/156 (68.59%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLM-VEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTA 60
           MGLKSVL V V +VAA+GAPLM VEAQL + IGS+   +  I+GTVFCTANGN+GTNGTA
Sbjct: 1   MGLKSVLFVFV-MVAAMGAPLMVVEAQLGS-IGSL-LSLARIQGTVFCTANGNIGTNGTA 60

Query: 61  TPIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCD 120
           TP FPNAAVQLQCG+ N+VST TTN+ G+FSI+L+PLQ LLSS+ SNCSV VNTPLS+C+
Sbjct: 61  TPAFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCN 120

Query: 121 VTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQF 156
            TLPS G LVS L   G T QGLLRI N++P  F F
Sbjct: 121 ATLPSVGNLVSALNLVGMTFQGLLRITNIIPTGFMF 153

[Close]

BLAST of Sed0004032.1 vs. ExPASy TrEMBL
Match: A0A4S4DKV4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_012208 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.4e-42
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTAT 60
           M LKS+L+V  +L+AA+ A  M EAQL  I G    G+  I+GTVFCTANGNMG NGT+T
Sbjct: 1   MALKSLLLVF-LLIAALTAVPMAEAQLGLISG--LLGLIRIQGTVFCTANGNMGVNGTST 60

Query: 61  PIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDV 120
           P+FP A VQLQCG  N VS+ TTNN G+FS++L+PLQF+LSSLLSNC++ VNTPLSNC++
Sbjct: 61  PVFPYAKVQLQCGAGNTVSSATTNNFGIFSMVLDPLQFVLSSLLSNCNLLVNTPLSNCNL 120

Query: 121 TLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQFI 157
            LPS G L+SPL F G+T+QGLL I N++P  FQF+
Sbjct: 121 NLPSVGGLLSPLQFIGNTLQGLLNISNIIPSGFQFL 153

[Close]

BLAST of Sed0004032.1 vs. ExPASy TrEMBL
Match: A0A7J7GYZ1 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_018763 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.4e-42
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 0


Query: 1   MGLKSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTAT 60
           M LKS+L+V  +L+AA+ A  M EAQL  I G    G+  I+GTVFCTANGNMG NGT+T
Sbjct: 1   MALKSLLLVF-LLIAALTAVPMAEAQLGLISG--LLGLIRIQGTVFCTANGNMGVNGTST 60

Query: 61  PIFPNAAVQLQCGDKNIVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDV 120
           P+FPNA VQLQCG  N VS+ TTNN G+FS++L+PLQF+LSSLLSNC++ VNTPLSNC++
Sbjct: 61  PVFPNAKVQLQCGAGNTVSSATTNNFGIFSMVLDPLQFVLSSLLSNCNLLVNTPLSNCNL 120

Query: 121 TLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEFQFI 157
            L S G L+SPL F G+T+QGLL I N++P  FQF+
Sbjct: 121 NLHSVGGLLSPLQFIGNTLQGLLNISNIIPSGFQFL 153

[Close]

BLAST of Sed0004032.1 vs. TAIR 10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 74/170 (43.53%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 7   LIVLVILVAAVGAPLMVEAQ-------------------LENIIGSIFFGV---TNIRGT 66
           + V +ILV  V    M EAQ                   L  ++G +  G+    NI G 
Sbjct: 9   MTVSLILVCLVVVSPMAEAQLGLGGSGGLGGLIGGLVGGLGGLVGGLVGGILNLVNINGV 68

Query: 67  VFCTANGNMGTNGTATPIFPNAAVQLQCGDKN-IVSTTTTNNMGLFSIILNPLQFLLSSL 126
           VFC+ NG    +GT+TP F NA V+LQCG +N +VST TTN  GLFS+  + +Q LLS+L
Sbjct: 69  VFCSLNG--APSGTSTPAFANAGVELQCGRQNRVVSTATTNAAGLFSLPTDSIQMLLSTL 128

Query: 127 LSNCSVAVNTPLSNCDVTLPSSGRLVSPLTFAGDTIQGLLRIINVVPLEF 154
           LS+C V V TPLS C+  LPS G LVS L   G+++ GLL II+++P  F
Sbjct: 129 LSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISIIPAGF 176

[Close]

BLAST of Sed0004032.1 vs. TAIR 10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 65/151 (43.05%), Postives = 90/151 (59.60%), Query Frame = 0


Query: 4   KSVLIVLVILVAAVGAPLMVEAQLENIIGSIFFGVTNIRGTVFCTANGNMGTNGTATPIF 63
           K +   LV+L   V +P+   A  ++ +G I   V  I G +FCT NG    NGT  P F
Sbjct: 6   KHITFSLVLLCLIVVSPM---ANAQSGLGGI--NVPIINGVLFCTING-APLNGTPAPAF 65

Query: 64  PNAAVQLQCGDKN-IVSTTTTNNMGLFSIILNPLQFLLSSLLSNCSVAVNTPLSNCDVTL 123
            NA VQLQCG+ N +V+ T TN  GLF+   N +Q  L +LL++C + V TP S+CD TL
Sbjct: 66  ANAVVQLQCGNLNRVVAETITNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATL 125

Query: 124 PSSGRLVSPLTFAGDTIQGLLRIINVVPLEF 154
           PS+G+L+S L   G  + GLL I+ ++P  F
Sbjct: 126 PSTGQLISQLNLVGSIVSGLLNIVAILPTGF 150

The following BLAST results are available for this feature:

BLAST of Sed0004032.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903470.1	2.5e-48	71.15	phylloplanin-like [Benincasa hispida]	[more]
XP_022137816.1	3.1e-46	66.67	phylloplanin-like [Momordica charantia]	[more]
XP_023522114.1	5.8e-45	69.87	phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like...	[more]
XP_022973793.1	5.8e-45	69.87	phylloplanin-like [Cucurbita maxima]	[more]
KAG6597529.1	2.2e-44	69.23	hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0004032.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56S59	2.0e-16	40.82	Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]

BLAST of Sed0004032.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7T1	1.5e-46	66.67	phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1	[more]
A0A6J1IE70	2.8e-45	69.87	phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1	[more]
A0A6J1FBV3	1.8e-44	68.59	phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1	[more]
A0A4S4DKV4	6.4e-42	62.18	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0122...	[more]
A0A7J7GYZ1	8.4e-42	62.18	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_018763 PE=4 SV=1	[more]

BLAST of Sed0004032.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16660.1	2.4e-25	43.53	Pollen Ole e 1 allergen and extensin family protein	[more]
AT3G16670.1	1.5e-22	43.05	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 41..121 e-value: 3.5E-6 score: 27.3
None	No IPR available	PANTHER	PTHR34458:SF5	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 1..156
IPR040404	Phylloplanin-like	PANTHER	PTHR34458	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN-RELATED	coord: 1..156

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0004032	Sed0004032	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004032.1-five_prime_utr	Sed0004032.1-five_prime_utr-LG12:5038276..5038302	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004032.1-exon	Sed0004032.1-exon-LG12:5038276..5038495	exon
Sed0004032.1-exon	Sed0004032.1-exon-LG12:5039336..5039776	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004032.1-cds	Sed0004032.1-cds-LG12:5038303..5038495	CDS
Sed0004032.1-cds	Sed0004032.1-cds-LG12:5039336..5039616	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0004032.1-three_prime_utr	Sed0004032.1-three_prime_utr-LG12:5039617..5039776	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0004032.1	Sed0004032.1-protein	polypeptide