Sed0003519.1 (mRNA) Chayote v1

Overview


Name	Sed0003519.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	26S proteasome regulatory subunit 6B homolog
Location	LG01: 5897468 .. 5902164 (-)
Sequence length	1811
RNA-Seq Expression	Sed0003519.1
Synteny	Sed0003519.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTCTGCCTTTTGCTTTCTACTGAGAGAAGGAAGAATCGGAAAACCAGAATGGCGGCCTCAGCTATGGTTCTCGACCCCAAATCCTCACCGGAGCCGCCGCCATCGTTCCCGTCGATGAGATCTGATCTTCAAGGCACGGCGGAACAGTCCTCCGACGAGGACGACCTGTACAGCCGTCTGAAATCGCTGCAGCGCCAGTTGGAGTTCATCGACATTCAAGAGGAGTACGTGAAGGATGAGCAGAAGAATTTGAAGCGCGAACTTCTGCGAGCACAGGAAGAGGTTAAAAGGATTCAGTCCGTGCCTTTGGTAATCGGCCAATTCATGGAAATGGTCGATCAGAATAATGGAATCGTTGGATCCACCACTGGTTCTAACTATTATGTTAGGATTCTCAGCACTATCAATCGCGAGCTTCTTAAACCCTCGGCCTCCGTCGCTTTGCACCGTCACTCTAATGCGTTGGTCGACGTCTTGCCTCCCGAGGCTGATTCTAGTATTTCTCTGCTCAGCCAGTCGGAGAAGCCTGATGTGACCTATAATGTGAGTTTTGCATAATTTTGGTTTCTTAAATTGTTCGAATTTGTATAATAATGTTGCGTTGGTTGTTCTTGTATGTCTTTGTTTGCTATATAGAATTAGGGTTTAGAATGACATTGTTTCTCATCCCAAAAATATATAGAATTAGGGTTAGAATGGAATCAATTCTTGTTGTTTTGGGTTGAACTCTTTTTTAACTGAGTTGTCATGTTCGTAATCATGATTGAAAGATGGTTAGATTGTTCTTCACTGTAATTGGTGACCATTTGACAGAAAAGTTTTATGAAATTTGATGATACTTCTGGTTTGTTCGTTCAATTGAAAATTTGCATTTCCCAGCAAGATTAATGCCACCCTTGATGATTTCTAAAGATTTTGAATGATTCGTTTATATTGTTTCCATGGGGTTTAAATGCGTGGATTTTAGGTTGAACAGTACTCGTATAAATGTGTTTTGAGGTTTCTTGATATCTTACTCCCAAAAGAGACTTTTTGATAGCTTTTAGTTTTCATAACTAAAGGCATTTTCTGCCTAAAAAATTGTTAATAGCTTAGTTTTTTTTTTTTGGCTAAGATTCACCACTTTCTCTTCAGTTTCTTAATCTGAGTTTAGGTTGCCGACTTTGATTTAGCTGATAGACTTTATTTCTTGATACAAATACTTCCTCATAGCATGTTCTCCTCAAGGAACCTTTGTGAAAACAAAGTAAGTCAGAGAATTTGCTTATTGGTTTCTTTTTAATTATTTTTAGGATATTGGTGGATGTGATATCCAAAAGCAAGAGATTCGTGAAGCAGTAGAGTTACCGCTTACTCACCATGAACTATACAAACAAATTGGTATTGATCCTCCTCGTGGTGTTTTGCTTTATGGTCCCCCTGGAACTGGTAAAACCATGCTTGCCAAGGCTGTTGCTAATCATACAACTGCTGCCTTTATCCGAGTTGTTGGTTCTGAATTTGTTCAGAAGTATTTGGGTGAGGTATGTTCGGATTTCCTATATATCTTTTACAACTTCCTGCTCATTTTCAAACTCGTACTACCCAAAAACAATCTATGAGACGATCCTGCACATGAATTATCACCCAACATTGGATGTTTGTAGCAAACTAGCCATTGATTTTACATTAGCTGAGTTTTTTGTCTTAGTTTCAAAGGAGTGAAACTGAGTTTCTTTTCTCAAGTTCAAGTACTGGTGGAGATCTTTTTGCATTAACTTTTTCTCTTTTGTTTCAATTTTCAGGGTCCACGAATGGTCCGCGATGTATTCCGTCTTGCTAAAGAAAATGCCCCTGCAATTATCTTTATTGATGAGGTTGACGCCATAGCAACAGCTCGTTTTGATGCTCAAACAGGAGCTGATAGAGAAGTCCAGCGTATTCTTATGGAACTTTTAAATCAGGTACAATATGCATAAAAATGTGGATCCAATTCACAAGGTTATAATGAACTATGATTCTCTGTGGATGCTGGTTGGTAATTTCATGAAATTAATTAGGAATAGAACTCTAAAGTGCTATTTAACTAACCTACCAATAATTTTCTGATGCCTATTGATTGTGATTCATTTAGTTTTGAACACAATATTATTTTTTTGTAGATGGATGGGTTCGACCAAACAGTGAATGTTAAGGTCATCATGGCAACTAATAGGGCTGACACATTGGATCCTGCCCTCCTACGTCCAGGAAGACTCGACAGAAAGATAGAATTCCCTTTACCTGATCGCCGACAAAAGAGGCTGGTATTTCAGGTGAATAATTTATTTTTAGCACCATCTTGTTTCTTTACCTGTAAACAGTAGGAGTGGCTTCGTAATGTATTTTATAATTTGTCTCTGCCCTTTTTCTTTCTTCAGCTCGCCCTCCTGGGTCTGGTAATCAAAATTAGACATGTATAATTTTTACTATGTATGCTGGGTGATTCACCCAACTTTTGTTTACAATTTCGGTTGTCCATGACTTTATGTAGGTTTGCACTGCAAAAATGAACTTGGGTGATGAGGTGGATCTAGAGGATTATGTTTCTCGCCCAGACAAAATCAGTGCTGCTGAGGTTAGTAATTTAAATGTCTGTGTACAGTATATGTGTTTTGCTCATCCTCAGCCAAAAGTAATTTTAGTAGAACACTTATTTGGAGCAATTAAATTCTGAAAAGTTATCTGATATGTTTTATTTTCTTTTATTTATATCTGATCCCATGATATTTAAACTTCTTGTGGATATCATTGAAGTCTGAAATCATATATTTTTTTGAAGTGCACAGTAAACCGCTAATGGAACAAACATTGGATTTCCTCCGTTCTTGTTTACTTGTTCAGTCTCTATGCAGCATATTCCACGCTGCTTTTAGGATAAGAAATTAGGGTGTAGAGTTGTAACTGATGGAAAAGTTGGGAATGAAGTGTGGATAGGAGAGAAAAGCTCGTGGTTTTCCAGGATTAGTGAATTAAAGTGGTTTTAAATGGCAGGCAGGGTCTGAAAAAAATTGGAAGTTATTCTGAAAATTTGAAAACTACATGAGTTCCTCACTTCTAAAAAAAGTTCGATTAAAAATACCATTTTGTATTTTGTTCCTACATTGAGATTTGTTCCCGAATAATGTTCATGTACTTTTAATAAAGCTTAAAACCGAACCATACTGAATTGATTCGACTAATGTAGACTGTAGAGGGCTTTGTGTAAGAGACAATAAATTCATTTCATGATGATCATCTACCTAACAATTGATTTTATATGATTGTTTTGACAACCAAATGTAGAAAGTTCTTTTTTTTTTAAACGAGGGTAACCACGCCCATCCCTAAGCTAGGCACCGGAGACATCGAAGGAGTAATGTCATAGGTGAGTTTCGAATTCAGGACCTTGAAGAGAGCATATCTTCAAAACCCAAGTCTTCAACCACTGTGCCACCCCTTGGGGACCAACCAAATGTAGAAAGTTGACCTGTGATAGTAGTCGTTGTGCACTTAAGCCGGCCCAAAAAATCACGGTGTGATGCCCCGAGTATAGTAGAGCGAAGCTCCGATCCCCGGTTGTAAAAAAAAAATACAAGAAAGGATGAAAATGTAAACATATTTAACCATCCTACCTAGGGTTAAGAAGACTTAAAGGAATTAAGATTGAACCCATAATGGTCACTATCTAAGAATTAATTTCGTACTCGTTTCTTTGACTAATGAATGTAGTAAGAAAGTGAACATATTTTTATTTTAAAATTCATAGACGGAATGAATACATATTATTTTTTTAAAGAACAAGAAACATATTGATATATTGACTAAAATTCCATATTGGAAAATACAACATATGACAAAAATATGGAGCAAGCCTTAACAGTACCAAAAAAATTATGCCTCTTTATGGTTGAAATGCTGCTAGTCTTCATATCATTTAGTAGGGGCATTTTAGTTGCCATCTAGTGTGAAATTGGACTGCAAAAACAAATCTTCTGTATCATTCCACCTCTCCTTCGTTGCTTCCAACATTAATCAGTAGATGTGATTCATTTGCAGATCTCTGCTATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCCAAGGATTTCGAGAAGGGTTACAGAACCAACGTGAAGAAGCCCGACACAGACTTTGAGTTCTACAAGTGATTCTCAGAGGTGGAAGTGAACTCTCGGTATCATCTTGTCGATATGGTCGTAATTATAGACCTCACCTGGAGATTGTGGCGACAGTGACTTTTAGTTCGAGTTTATTTGACCGTCAAACAGAGCTGTGAGTCGGTATTTTCCTTGTATCACTCTGTTACTCCTTCCTCTGTATGTTATATTTTTGCATTGTTTTAGAATGCTGGTCTCCGACATTGTGCAAAACTTGAATTGTTTTATACTGGCCTGCTCCAATCTTGAAAATGATGTTTATCTACTCAGCAAATAGAACATTCTCAAATTTGTCTCTGGGACAGTTGTGCTTAATGTTGCGAACAAAATGTCTTTATTTTTGGCCTTGGAGCTGAGTTGAGTAATTCTTAGATACTGCTCTATGAACTGGTATCTGTTTTAGGTAACTTTCTAACTTAGGTTGGAGCTTCTATGGTTTGGTTGTGTCACCTGGTAGTTAAGTTGAGGCGACTTTCTTTGTTTTCTTTTTTTGGC

mRNA sequence

CGCTCTGCCTTTTGCTTTCTACTGAGAGAAGGAAGAATCGGAAAACCAGAATGGCGGCCTCAGCTATGGTTCTCGACCCCAAATCCTCACCGGAGCCGCCGCCATCGTTCCCGTCGATGAGATCTGATCTTCAAGGCACGGCGGAACAGTCCTCCGACGAGGACGACCTGTACAGCCGTCTGAAATCGCTGCAGCGCCAGTTGGAGTTCATCGACATTCAAGAGGAGTACGTGAAGGATGAGCAGAAGAATTTGAAGCGCGAACTTCTGCGAGCACAGGAAGAGGTTAAAAGGATTCAGTCCGTGCCTTTGGTAATCGGCCAATTCATGGAAATGGTCGATCAGAATAATGGAATCGTTGGATCCACCACTGGTTCTAACTATTATGTTAGGATTCTCAGCACTATCAATCGCGAGCTTCTTAAACCCTCGGCCTCCGTCGCTTTGCACCGTCACTCTAATGCGTTGGTCGACGTCTTGCCTCCCGAGGCTGATTCTAGTATTTCTCTGCTCAGCCAGTCGGAGAAGCCTGATGTGACCTATAATGATATTGGTGGATGTGATATCCAAAAGCAAGAGATTCGTGAAGCAGTAGAGTTACCGCTTACTCACCATGAACTATACAAACAAATTGGTATTGATCCTCCTCGTGGTGTTTTGCTTTATGGTCCCCCTGGAACTGGTAAAACCATGCTTGCCAAGGCTGTTGCTAATCATACAACTGCTGCCTTTATCCGAGTTGTTGGTTCTGAATTTGTTCAGAAGTATTTGGGTGAGGGTCCACGAATGGTCCGCGATGTATTCCGTCTTGCTAAAGAAAATGCCCCTGCAATTATCTTTATTGATGAGGTTGACGCCATAGCAACAGCTCGTTTTGATGCTCAAACAGGAGCTGATAGAGAAGTCCAGCGTATTCTTATGGAACTTTTAAATCAGATGGATGGGTTCGACCAAACAGTGAATGTTAAGGTCATCATGGCAACTAATAGGGCTGACACATTGGATCCTGCCCTCCTACGTCCAGGAAGACTCGACAGAAAGATAGAATTCCCTTTACCTGATCGCCGACAAAAGAGGCTGGTATTTCAGGTTTGCACTGCAAAAATGAACTTGGGTGATGAGGTGGATCTAGAGGATTATGTTTCTCGCCCAGACAAAATCAGTGCTGCTGAGATCTCTGCTATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCCAAGGATTTCGAGAAGGGTTACAGAACCAACGTGAAGAAGCCCGACACAGACTTTGAGTTCTACAAGTGATTCTCAGAGGTGGAAGTGAACTCTCGGTATCATCTTGTCGATATGGTCGTAATTATAGACCTCACCTGGAGATTGTGGCGACAGTGACTTTTAGTTCGAGTTTATTTGACCGTCAAACAGAGCTGTGAGTCGGTATTTTCCTTGTATCACTCTGTTACTCCTTCCTCTGTATGTTATATTTTTGCATTGTTTTAGAATGCTGGTCTCCGACATTGTGCAAAACTTGAATTGTTTTATACTGGCCTGCTCCAATCTTGAAAATGATGTTTATCTACTCAGCAAATAGAACATTCTCAAATTTGTCTCTGGGACAGTTGTGCTTAATGTTGCGAACAAAATGTCTTTATTTTTGGCCTTGGAGCTGAGTTGAGTAATTCTTAGATACTGCTCTATGAACTGGTATCTGTTTTAGGTAACTTTCTAACTTAGGTTGGAGCTTCTATGGTTTGGTTGTGTCACCTGGTAGTTAAGTTGAGGCGACTTTCTTTGTTTTCTTTTTTTGGC

Coding sequence (CDS)

ATGGCGGCCTCAGCTATGGTTCTCGACCCCAAATCCTCACCGGAGCCGCCGCCATCGTTCCCGTCGATGAGATCTGATCTTCAAGGCACGGCGGAACAGTCCTCCGACGAGGACGACCTGTACAGCCGTCTGAAATCGCTGCAGCGCCAGTTGGAGTTCATCGACATTCAAGAGGAGTACGTGAAGGATGAGCAGAAGAATTTGAAGCGCGAACTTCTGCGAGCACAGGAAGAGGTTAAAAGGATTCAGTCCGTGCCTTTGGTAATCGGCCAATTCATGGAAATGGTCGATCAGAATAATGGAATCGTTGGATCCACCACTGGTTCTAACTATTATGTTAGGATTCTCAGCACTATCAATCGCGAGCTTCTTAAACCCTCGGCCTCCGTCGCTTTGCACCGTCACTCTAATGCGTTGGTCGACGTCTTGCCTCCCGAGGCTGATTCTAGTATTTCTCTGCTCAGCCAGTCGGAGAAGCCTGATGTGACCTATAATGATATTGGTGGATGTGATATCCAAAAGCAAGAGATTCGTGAAGCAGTAGAGTTACCGCTTACTCACCATGAACTATACAAACAAATTGGTATTGATCCTCCTCGTGGTGTTTTGCTTTATGGTCCCCCTGGAACTGGTAAAACCATGCTTGCCAAGGCTGTTGCTAATCATACAACTGCTGCCTTTATCCGAGTTGTTGGTTCTGAATTTGTTCAGAAGTATTTGGGTGAGGGTCCACGAATGGTCCGCGATGTATTCCGTCTTGCTAAAGAAAATGCCCCTGCAATTATCTTTATTGATGAGGTTGACGCCATAGCAACAGCTCGTTTTGATGCTCAAACAGGAGCTGATAGAGAAGTCCAGCGTATTCTTATGGAACTTTTAAATCAGATGGATGGGTTCGACCAAACAGTGAATGTTAAGGTCATCATGGCAACTAATAGGGCTGACACATTGGATCCTGCCCTCCTACGTCCAGGAAGACTCGACAGAAAGATAGAATTCCCTTTACCTGATCGCCGACAAAAGAGGCTGGTATTTCAGGTTTGCACTGCAAAAATGAACTTGGGTGATGAGGTGGATCTAGAGGATTATGTTTCTCGCCCAGACAAAATCAGTGCTGCTGAGATCTCTGCTATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCCAAGGATTTCGAGAAGGGTTACAGAACCAACGTGAAGAAGCCCGACACAGACTTTGAGTTCTACAAGTGA

Protein sequence

MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK

Homology

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BLAST of Sed0003519.1 vs. NCBI nr
Match: XP_008456254.1 (PREDICTED: 26S protease regulatory subunit 6B homolog [Cucumis melo] >KAA0033534.1 26S protease regulatory subunit 6B-like protein [Cucumis melo var. makuwa] >TYJ95655.1 26S protease regulatory subunit 6B-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 802.0 bits (2070), Expect = 2.5e-228
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. NCBI nr
Match: XP_038902462.1 (26S proteasome regulatory subunit 6B homolog [Benincasa hispida])

HSP 1 Score: 801.6 bits (2069), Expect = 3.2e-228
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSMRSDLQGWAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. NCBI nr
Match: XP_022149692.1 (26S proteasome regulatory subunit 6B homolog [Momordica charantia])

HSP 1 Score: 799.7 bits (2064), Expect = 1.2e-227
Identity = 413/418 (98.80%), Postives = 414/418 (99.04%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPK S EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKPSLEPPASFPSMRSDLQGFAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. NCBI nr
Match: XP_022947765.1 (26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_023007178.1 26S proteasome regulatory subunit 6B homolog [Cucurbita maxima] >KAG7035323.1 26S protease regulatory subunit 6B-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 798.5 bits (2061), Expect = 2.7e-227
Identity = 412/418 (98.56%), Postives = 414/418 (99.04%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAA+AMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. NCBI nr
Match: XP_004139931.1 (26S proteasome regulatory subunit 6B homolog [Cucumis sativus] >KGN46764.1 hypothetical protein Csa_020651 [Cucumis sativus])

HSP 1 Score: 797.7 bits (2059), Expect = 4.7e-227
Identity = 412/418 (98.56%), Postives = 413/418 (98.80%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPKSS EPP S P MRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASLPPMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. ExPASy Swiss-Prot
Match: P85200 (26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 5.6e-215
Identity = 387/417 (92.81%), Postives = 399/417 (95.68%), Query Frame = 0


Query: 3   ASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSD-EDDLYSRLKSLQRQLEFIDIQEEYV 62
           A+ MVLDPK S  PPP+ P+  +    T  QS+D EDDLY+RLK+L RQ+EFIDIQEEYV
Sbjct: 2   AATMVLDPKPSSTPPPTLPNPYT----TDSQSTDSEDDLYTRLKTLDRQIEFIDIQEEYV 61

Query: 63  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 122
           KDE KNLKRE LR+QEEVKRIQSVPLVIGQFMEM+DQNNGIVGSTTGSNYYVRILSTINR
Sbjct: 62  KDELKNLKREQLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINR 121

Query: 123 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 182
           ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV
Sbjct: 122 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 181

Query: 183 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 242
           ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG
Sbjct: 182 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 241

Query: 243 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 302
           EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ
Sbjct: 242 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 301

Query: 303 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLE 362
           TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLE
Sbjct: 302 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLE 361

Query: 363 DYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           DYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDF+FYK
Sbjct: 362 DYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK 414

[Close]

BLAST of Sed0003519.1 vs. ExPASy Swiss-Prot
Match: Q9SEI4 (26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 6.8e-213
Identity = 385/417 (92.33%), Postives = 395/417 (94.72%), Query Frame = 0


Query: 2   AASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEYV 61
           A ++MVLDPK+SP           DL      ++DE+DLY RLKSL+RQLEF DIQEEYV
Sbjct: 5   AVASMVLDPKASP--------ALMDL-----STADEEDLYGRLKSLERQLEFTDIQEEYV 64

Query: 62  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 121
           KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR
Sbjct: 65  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 124

Query: 122 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 181
           ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV+YNDIGGCDIQKQEIREAV
Sbjct: 125 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAV 184

Query: 182 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 241
           ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG
Sbjct: 185 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 244

Query: 242 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 301
           EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ
Sbjct: 245 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 304

Query: 302 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLE 361
           TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNL DEVDLE
Sbjct: 305 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE 364

Query: 362 DYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           DYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYR NVKKPDTDFEFYK
Sbjct: 365 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408

[Close]

BLAST of Sed0003519.1 vs. ExPASy Swiss-Prot
Match: P54778 (26S proteasome regulatory subunit 6B homolog OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 2.6e-212
Identity = 384/416 (92.31%), Postives = 393/416 (94.47%), Query Frame = 0


Query: 3   ASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEYVK 62
           A+AMVLDPK    P    P+ R +   T   S  EDDLY+RLKSLQRQLEFI+IQEEYVK
Sbjct: 2   ATAMVLDPK----PAEKLPATRPETSITDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVK 61

Query: 63  DEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRE 122
           DE KNL+RE LRAQEEVKRIQSVPLVIGQFMEM+DQNN IVGSTTGSNYYVRILSTINRE
Sbjct: 62  DELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRE 121

Query: 123 LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE 182
           LLKPSASV L RHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE
Sbjct: 122 LLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE 181

Query: 183 LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGE 242
           LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGE
Sbjct: 182 LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGE 241

Query: 243 GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT 302
           GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT
Sbjct: 242 GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT 301

Query: 303 VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLED 362
           VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLED
Sbjct: 302 VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLED 361

Query: 363 YVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           YVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 362 YVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 413

[Close]

BLAST of Sed0003519.1 vs. ExPASy Swiss-Prot
Match: P46507 (26S proteasome regulatory subunit 6B OS=Manduca sexta OX=7130 PE=2 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 1.9e-183
Identity = 316/383 (82.51%), Postives = 357/383 (93.21%), Query Frame = 0


Query: 36  DEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEM 95
           + +DLY++ K LQR LEF+++QEEY+KDEQ+NLK+E L AQEEVKRIQSVPLVIGQF+E 
Sbjct: 33  ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 92

Query: 96  VDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLS 155
           VDQN GIVGSTTGSNYYVRILSTI+RELLKPSASVALH+HSNALVDVLPPEADSSIS+L 
Sbjct: 93  VDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQ 152

Query: 156 QSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTML 215
             EKPDV Y+DIGG D QKQEIREAVELPLTH ELY+QIGI+PPRGVL+YGPPG GKTML
Sbjct: 153 ADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTML 212

Query: 216 AKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF 275
           A AVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+PAIIFIDE+DAIAT RF
Sbjct: 213 ANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRF 272

Query: 276 DAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 335
           DAQTGADREVQRIL+ELLNQMDGFDQT NVKVIMATNRADTLDPALLRPGRLDRKIEFPL
Sbjct: 273 DAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 332

Query: 336 PDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVIL 395
           PDRRQKRL+F   TAKMNL +EVDLE++V+RPD++S A+I+AICQEAGM+AVR+NRY++L
Sbjct: 333 PDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVL 392

Query: 396 PKDFEKGYRTNVKKPDTDFEFYK 419
           PKDFEKGY+ N+KK ++++EFYK
Sbjct: 393 PKDFEKGYKNNIKKDESEYEFYK 415

[Close]

BLAST of Sed0003519.1 vs. ExPASy Swiss-Prot
Match: P54775 (26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2)

HSP 1 Score: 636.0 bits (1639), Expect = 3.1e-181
Identity = 320/403 (79.40%), Postives = 359/403 (89.08%), Query Frame = 0


Query: 16  PPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRA 75
           P  S    ++ L     +  D +DLYSR K LQ++LEF+++QEEY+KDEQKNLK+E L A
Sbjct: 16  PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHA 75

Query: 76  QEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRH 135
           QEEVKRIQS+PLVIGQF+E VDQN  IVGSTTGSNYYVRILSTI+RELLKP+ASVALH+H
Sbjct: 76  QEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKH 135

Query: 136 SNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIG 195
           SNALVDVLPPEADSSI +L+  +KPDV Y DIGG DIQKQE+REAVELPLTH ELYKQIG
Sbjct: 136 SNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIG 195

Query: 196 IDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255
           IDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK
Sbjct: 196 IDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 255

Query: 256 ENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRAD 315
           ENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNVKVIMATNRAD
Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315

Query: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEI 375
           TLDPALLRPGRLDRKIEFPLPDRRQKRL+F   T+KMNL +EVDLEDYV+RPDKIS A+I
Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADI 375

Query: 376 SAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           ++ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 376 NSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of Sed0003519.1 vs. ExPASy TrEMBL
Match: A0A5D3BAZ1 (26S protease regulatory subunit 6B-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00830 PE=3 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.2e-228
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. ExPASy TrEMBL
Match: A0A1S3C3H0 (26S protease regulatory subunit 6B homolog OS=Cucumis melo OX=3656 GN=LOC103496251 PE=3 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 1.2e-228
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. ExPASy TrEMBL
Match: A0A6J1D8P1 (26S proteasome regulatory subunit 6B homolog OS=Momordica charantia OX=3673 GN=LOC111018058 PE=3 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 6.0e-228
Identity = 413/418 (98.80%), Postives = 414/418 (99.04%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAASAMVLDPK S EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAASAMVLDPKPSLEPPASFPSMRSDLQGFAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. ExPASy TrEMBL
Match: A0A6J1L703 (26S proteasome regulatory subunit 6B homolog OS=Cucurbita maxima OX=3661 GN=LOC111499750 PE=3 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.3e-227
Identity = 412/418 (98.56%), Postives = 414/418 (99.04%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAA+AMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. ExPASy TrEMBL
Match: A0A6J1G7T5 (26S proteasome regulatory subunit 6B homolog OS=Cucurbita moschata OX=3662 GN=LOC111451527 PE=3 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 1.3e-227
Identity = 412/418 (98.56%), Postives = 414/418 (99.04%), Query Frame = 0


Query: 1   MAASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60
           MAA+AMVLDPKSS EPP SFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIDIQEEY
Sbjct: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEY 60

Query: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360

Query: 361 EDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Sed0003519.1 vs. TAIR 10
Match: AT5G58290.1 (regulatory particle triple-A ATPase 3 )

HSP 1 Score: 741.1 bits (1912), Expect = 4.9e-214
Identity = 385/417 (92.33%), Postives = 395/417 (94.72%), Query Frame = 0


Query: 2   AASAMVLDPKSSPEPPPSFPSMRSDLQGTAEQSSDEDDLYSRLKSLQRQLEFIDIQEEYV 61
           A ++MVLDPK+SP           DL      ++DE+DLY RLKSL+RQLEF DIQEEYV
Sbjct: 5   AVASMVLDPKASP--------ALMDL-----STADEEDLYGRLKSLERQLEFTDIQEEYV 64

Query: 62  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 121
           KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR
Sbjct: 65  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 124

Query: 122 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 181
           ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV+YNDIGGCDIQKQEIREAV
Sbjct: 125 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAV 184

Query: 182 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 241
           ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG
Sbjct: 185 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 244

Query: 242 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 301
           EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ
Sbjct: 245 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 304

Query: 302 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLE 361
           TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNL DEVDLE
Sbjct: 305 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE 364

Query: 362 DYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           DYVSRPDKISAAEI+AICQEAGMHAVRKNRYVILPKDFEKGYR NVKKPDTDFEFYK
Sbjct: 365 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408

[Close]

BLAST of Sed0003519.1 vs. TAIR 10
Match: AT4G29040.1 (regulatory particle AAA-ATPase 2A )

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-104
Identity = 184/362 (50.83%), Postives = 271/362 (74.86%), Query Frame = 0


Query: 43  RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQN 102
           RL  L+R  +++ ++EE+V + Q+ LK +  +A+E+   V  ++  P+ +G   E++D+N
Sbjct: 64  RLLKLERIKDYLLMEEEFVAN-QERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDEN 123

Query: 103 NGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEK 162
           + IV S+ G  YYV ILS ++++ L+P  S+ +H    ++V +L  E D  +S++   + 
Sbjct: 124 HAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKA 183

Query: 163 PDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 222
           P  +Y DIGG + Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAV
Sbjct: 184 PLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAV 243

Query: 223 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 282
           AN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +
Sbjct: 244 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 303

Query: 283 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 342
           G +RE+QR ++ELLNQ+DGFD   +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 304 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 363

Query: 343 QKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDF 402
            +R +FQ+ T+KM L ++V+LE++V   D+ S A+I AIC EAG+ A+R+ R  +   DF
Sbjct: 364 TRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDF 423

[Close]

BLAST of Sed0003519.1 vs. TAIR 10
Match: AT2G20140.1 (AAA-type ATPase family protein )

HSP 1 Score: 376.7 bits (966), Expect = 2.4e-104
Identity = 184/362 (50.83%), Postives = 271/362 (74.86%), Query Frame = 0


Query: 43  RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQN 102
           RL  L+R  +++ ++EE+V + Q+ LK +  +A+E+   V  ++  P+ +G   E++D+N
Sbjct: 64  RLLKLERIKDYLLMEEEFVAN-QERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDEN 123

Query: 103 NGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEK 162
           + IV S+ G  YYV ILS ++++ L+P  S+ +H    ++V +L  E D  +S++   + 
Sbjct: 124 HAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKA 183

Query: 163 PDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 222
           P  +Y DIGG + Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAV
Sbjct: 184 PLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAV 243

Query: 223 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 282
           AN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +
Sbjct: 244 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANS 303

Query: 283 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 342
           G +RE+QR ++ELLNQ+DGFD   +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 304 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 363

Query: 343 QKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDF 402
            +R +FQ+ T+KM L ++V+LE++V   D+ S A+I AIC EAG+ A+R+ R  +   DF
Sbjct: 364 TRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDF 423

[Close]

BLAST of Sed0003519.1 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 305.8 bits (782), Expect = 5.2e-83
Identity = 165/371 (44.47%), Postives = 242/371 (65.23%), Query Frame = 0


Query: 44  LKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIV 103
           +  LQRQL         ++ ++  L   +   +EE++ +Q     +G+ ++++ +N  +V
Sbjct: 40  IHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLV 99

Query: 104 GSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVT 163
                  Y V I  +I+   + PS  VAL   S  L  VLP + D  ++L+   + PD T
Sbjct: 100 KVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDST 159

Query: 164 YNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHT 223
           Y+ IGG D Q +EI+E +ELP+ H EL++ +GI  P+GVLLYGPPGTGKT+LA+AVA+HT
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219

Query: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-AD 283
              FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G  D
Sbjct: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279

Query: 284 REVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 343
            EVQR ++ELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   + 
Sbjct: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRF 339

Query: 344 LVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKG 403
            + ++ + KMNL   +DL+    + +  S AE+ A+C EAGM A+R+ R  +  +DFE  
Sbjct: 340 DILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399

Query: 404 YRTNVKKPDTD 414
               V K DT+
Sbjct: 400 V-AKVMKKDTE 409

[Close]

BLAST of Sed0003519.1 vs. TAIR 10
Match: AT1G53750.1 (regulatory particle triple-A 1A )

HSP 1 Score: 305.4 bits (781), Expect = 6.8e-83
Identity = 145/270 (53.70%), Postives = 194/270 (71.85%), Query Frame = 0


Query: 130 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHE 189
           V + R+   +   LPP+ D S+++++  EKPDVTYND+GGC  Q +++RE VELP+ H E
Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192

Query: 190 LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRD 249
            + ++GIDPP+GVL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR+
Sbjct: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252

Query: 250 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 309
           +F++A+     I+F DEVDAI  ARFD   G D EVQR ++E++NQ+DGFD   N+KV+M
Sbjct: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312

Query: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDK 369
           ATNR DTLDPALLRPGRLDRK+EF LPD   +  +F++ T  MN   ++  E        
Sbjct: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPN 372

Query: 370 ISAAEISAICQEAGMHAVRKNRYVILPKDF 400
            + A+I ++C EAGM+A+R  R  +  KDF
Sbjct: 373 STGADIRSVCTEAGMYAIRARRKTVTEKDF 402

The following BLAST results are available for this feature:

BLAST of Sed0003519.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456254.1	2.5e-228	99.04	PREDICTED: 26S protease regulatory subunit 6B homolog [Cucumis melo] >KAA0033534...	[more]
XP_038902462.1	3.2e-228	99.04	26S proteasome regulatory subunit 6B homolog [Benincasa hispida]	[more]
XP_022149692.1	1.2e-227	98.80	26S proteasome regulatory subunit 6B homolog [Momordica charantia]	[more]
XP_022947765.1	2.7e-227	98.56	26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_023007178....	[more]
XP_004139931.1	4.7e-227	98.56	26S proteasome regulatory subunit 6B homolog [Cucumis sativus] >KGN46764.1 hypot...	[more]

BLAST of Sed0003519.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85200	5.6e-215	92.81	26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 S...	[more]
Q9SEI4	6.8e-213	92.33	26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P54778	2.6e-212	92.31	26S proteasome regulatory subunit 6B homolog OS=Solanum tuberosum OX=4113 PE=2 S...	[more]
P46507	1.9e-183	82.51	26S proteasome regulatory subunit 6B OS=Manduca sexta OX=7130 PE=2 SV=1	[more]
P54775	3.1e-181	79.40	26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2	[more]

BLAST of Sed0003519.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAZ1	1.2e-228	99.04	26S protease regulatory subunit 6B-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C3H0	1.2e-228	99.04	26S protease regulatory subunit 6B homolog OS=Cucumis melo OX=3656 GN=LOC1034962...	[more]
A0A6J1D8P1	6.0e-228	98.80	26S proteasome regulatory subunit 6B homolog OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1L703	1.3e-227	98.56	26S proteasome regulatory subunit 6B homolog OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1G7T5	1.3e-227	98.56	26S proteasome regulatory subunit 6B homolog OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0003519.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58290.1	4.9e-214	92.33	regulatory particle triple-A ATPase 3	[more]
AT4G29040.1	1.8e-104	50.83	regulatory particle AAA-ATPase 2A	[more]
AT2G20140.1	2.4e-104	50.83	AAA-type ATPase family protein	[more]
AT5G19990.1	5.2e-83	44.47	regulatory particle triple-A ATPase 6A	[more]
AT1G53750.1	6.8e-83	53.70	regulatory particle triple-A 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..85
None	No IPR available	GENE3D	2.40.50.140		coord: 39..154 e-value: 8.4E-27 score: 95.2
None	No IPR available	GENE3D	1.10.8.60		coord: 339..418 e-value: 1.6E-21 score: 77.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 26..418
None	No IPR available	CDD	cd00009	AAA	coord: 168..335 e-value: 2.51939E-28 score: 107.232
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 198..337 e-value: 1.5E-23 score: 94.3
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 47..401 e-value: 1.6E-134 score: 446.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 155..335 e-value: 1.0E-71 score: 242.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 160..404
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 358..400 e-value: 2.7E-8 score: 33.5
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 89..144 e-value: 4.1E-10 score: 39.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 202..335 e-value: 3.1E-44 score: 150.6
IPR035256	26S Proteasome regulatory subunit 6B	PANTHER	PTHR23073:SF120	26S PROTEASOME REGULATORY SUBUNIT 6B HOMOLOG	coord: 26..418
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 305..323

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0003519	Sed0003519	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003519.1-exon	Sed0003519.1-exon-LG01:5897468..5898106	exon
Sed0003519.1-exon	Sed0003519.1-exon-LG01:5899567..5899650	exon
Sed0003519.1-exon	Sed0003519.1-exon-LG01:5899869..5900021	exon
Sed0003519.1-exon	Sed0003519.1-exon-LG01:5900220..5900378	exon
Sed0003519.1-exon	Sed0003519.1-exon-LG01:5900640..5900870	exon
Sed0003519.1-exon	Sed0003519.1-exon-LG01:5901620..5902164	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003519.1-three_prime_utr	Sed0003519.1-three_prime_utr-LG01:5897468..5897971	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003519.1-cds	Sed0003519.1-cds-LG01:5897972..5898106	CDS
Sed0003519.1-cds	Sed0003519.1-cds-LG01:5899567..5899650	CDS
Sed0003519.1-cds	Sed0003519.1-cds-LG01:5899869..5900021	CDS
Sed0003519.1-cds	Sed0003519.1-cds-LG01:5900220..5900378	CDS
Sed0003519.1-cds	Sed0003519.1-cds-LG01:5900640..5900870	CDS
Sed0003519.1-cds	Sed0003519.1-cds-LG01:5901620..5902114	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003519.1-five_prime_utr	Sed0003519.1-five_prime_utr-LG01:5902115..5902164	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0003519.1	Sed0003519.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0008233	peptidase activity