Sed0003177.3 (mRNA) Chayote v1

Overview


Name	Sed0003177.3
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG10: 4335216 .. 4339707 (-)
Sequence length	792
RNA-Seq Expression	Sed0003177.3
Synteny	Sed0003177.3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAAACCTAGCCACTATTTGTTCCCATCTTGAAGCTTCATCTTCTTTAATGGCAATTATGAGTGAAGTATCGTCTCACATTCTGAACAATGGAGTAGGCTAGTCCGAACCACTTTACTCGGTGTGTTAGTTCCTTCTCCCCCTTTATTTGGTTTGATTTCATCTCTATTTGCTCAATTTGGTTTAGATCTATCATTTGCTATCTTTGATTCATTTAGAGTATAGATCTAGCAATTTTGCACAACAGAAACCTTATAACAATATATGAGAATAAGTGAATTATTCTTCACGTATTACCGATTAATTTTGAGATGAATCTTCACACTTTCTAATAAGCTTATTCTACAAATACCAAAAAAAAAAATGTTATTCATTACCAGGAGTAATCGAAACAATACAACTTTTGTTGTATATAATGTACTACTATGATATTACACTATACGATGTGAGAATTTCACATCTTGCAAATAATAATTTTTGCCTTGAACTCTGCCCATCTAACATTTATTTGAGTTTCAAGTATAATTAAGATTGTTTCAGAAAAAATAATAATATCTTGTTGCTTAACTGGGATTCAAGTAATGAAGCACTGGATAATATTATGTGCACACATATCCAGGGAAACCCATGGTAATAGATAAAAAAAAAATGATGCTCTGTTAGCCAATAAAGTCATGTATCTTGCAGAAATAATCTGGAACATTTCATAATTTAACCTAGGTTTAAAAAAAAAAAAATTATTATTAACATTTATGTTAACTTGCTGCAGAAACAACAATAAAAAGCGAAACGACGTTGAAGATTTCTAAAAATTAAAGCTGTGTATTGGTGGCATCATCACTTGACTTGCTGCAATAATAATAATATAATGTGTAGTAACATATATATATATATATATATATATATATAACATTTTCGTGCATATCAATCATATATGCAAAAGCAATTCATAAAATTTTGACTAATTTCATTGCATGAAAGAAAGGGCATTATATGCTTCTCAAAAATTAAAAAAGAAAAAAATAATAAAGGGCACTATATAATAGATGACTAAGATAAGGAGTGTCAAGACCTTATCCAGCTAAAATCACAAGGGAAATTTCAGGGAAAAGGGAATAAGAATTAAGTGAAGAATAGGAAGGAAAATGGTTTGGTGAAAAATGATTGTTTGGGTTTGTGGTAAATGAAATAATTATGAAGAAAATGATCATTTTTGTTTGGGACAAATGAGAATATTATTAGAAAAATAAAATAATAAATATGATGAAATTGAAAAATAGTTACGAAAGGAATAAAAAGTTATTAGGAGATGACTAAAAAATAGTTATTAAAAGAATAAAAAAAAAAGTTATTTTTGAAAAAATGTGATTATAGAGAAAATAATTTTCAATGTCCCAAATATCGAGTATCACTCTCTCTCTCTCTCGATATATATAGAGTTAGATCCATATGTGGTCCTATAGGATTCTACGTTGTAGTGATGTTTATGATTTACGATAAAAACTAATTTTTCTCAAAAAAAAAAAAAAAAAAAAATCTAAGTTCAAAATTTTCAATTTTCAAATATTATTGTTGGAGAAGAAGAGAAGAGGGAGAAAGAAAAATTGAAAAAGTAACCGTACCGTTAAAGAAAATCTTATTTAAATAAAATTATTTGAAAAATGATGGTAAAAAAACTTTATCCAAAAAATGTTTTTAGAAGAGATGAAGTAGAAAAAAAAATTGTGATTCCAAAAAAAAAAAAACAAAATTTTTTTTCTGTAAACAAAATTGAGGTAGATTTTACAAATGTTGCACACTTGATAACCGAACCGACCGAACCAACCGAACCAAATGGCGGTTTGGGTTTAGGGCTTCTTCAGCTTAAGAACCAACATCGGCTCTCACCATTCCTTTCCACTCCCTCTTTTTCTTTCGCATTTATCGTCTCACTCAGTCGCCGTCGCCGTCGACTCATTCCGCCTTTGCTTCCGATCGGAAATTTCGCTGTCGCCGTCAACTCTCACCGTCTTCTAGGTTTCTCTAATCCTTTCGTGGGTATTTAATTAATCTATTAATCTTCGCTTCTGTTTGCTTTAGCTCTTATTTTGAACTGGGATCCCGTTCTTGCTATCATTCTTGAATTCATAATTGGCTCCATCTCTGGATTTTTTGTTGCTATTTTGCTGTTTCCCATTTCTTTCTTTTTGTTTCTTATCCTTTATCTCTGTGTTAATGTTATTTTGTTTCCTGTTTCTTTCTTCAATTCGGTTGGTTAGTTTGAATTTATCTAATTCAGAGCAATCAGAGACCACTTACCGAGTCCCCGAGCGGCAGCACAGTTGACTCGGGGACTCAGTTAGTTGAAAGGACAGACTTATGCCATCCTTGAGGTCCTACGTTCGAAACTCTCTCGTGATATTAATTTGTAGACTCTTTGATAGTCTAGTGGAGGGCAAGTGGGCCCCAGGTTTAGAGGAATCGCTTAGGGTGTGTTTGGGCTTCGTTTAGGTAAACGGCTGGGTTGGTTATAATAATAATTCAACCGATGTTTGAACGGTAGTTACCTAAAACTGCGTGCCCGTTTATTTAAACCTTGCATATATTACTTTTTGTTACAAAACTAGCTCCTCAAACATCGTTTATCATAACCTTCCGTCTATCATAACTAAACCGGTGCTCCAAACACACCTTTATTATTTTTGTATTTCACTATCGATGACCATCACTATCCTCAAGACTTAAAGGTTACAAAGATTTAAGCAAAACACAAATTAAAGAGACAATATGCATGAAGAAGAGAAGAAGCTAAGTAAATTGGCCATGACTTTCTCTATAATTCAACTCGTGACTGGGAGTTGAGTGAGTCATGGCTGTTTTCCATCGAAATGATAATTAGATTGACTTATATCTTTTGATTCCCTTCCACCTACTAATGATATTCTGACAACTCATTTCTAACTGTTATGGAGGGGACTAGTGGTCAACAAGGTCATAAGGAACTAAGTAGTGATGAGTACAATTCATGATGATCATCTATCTAGGATTAATTTCCTCCCGGTTTTCTTCACATCTAAATGTTGAATGGTCAGACGGTTTAGACTGTACTGTGAAAACAATCGAGGTGTACATGAGCTGGAAATAAATAAGAAAGAAAACGTTGGTTGCTATGTTTATAATCTCTGTATAAAAACAGTATTTTCTGTGATGTATGAGTTTAAATGGGCATGGATTTTGTTTATTCTTTCAAGTTTAACCAGTTCTTGAGAATATTTAATAAGTGTGAATGAATCGGCTGTGATATGTTTATCTGTGGTCTTATGAATAGTTCTTGAGAATTTATAATGTATTGCTCGGTCAAATTGAATAAAATATCAAGATGTCAACTTGCCATACTCTGTATCTCATTCTCAAAATTGCTCAAACTGACAACCAAATTCAAGGGCTTTGATTGATCAGGTTTTGAGCTTTATAGGCTTTCACTCTCACCCACCATAATTTGAGCTCACTAATCATCAGAATGCAGTTTAATAAAATTTTACTCGAACCAAAACTGGAGACAGATAATTACAAAATTTTCCAGAAGTTTAAATTGCTTCAATCCCTCAATTGCCAACAAGTCTCGAAGTATTCTATAGATGAAAATTGTAAATGGAAATATTCAAGCTGTTCTCCGAAGAGTAGAAGGAAATAGTTCTCTTTTATTCATGAGCTTTGCTTGTTTGATTTATGTCAAATTGCTTTGGAGGTTTAACTTTTTTTTTTAATAACTCATTAGGATGCCTTGGTCTTTTACAATTGAGACTTGTAAACAAACTCATTCTAGTTATTCTTTTGTGCAGCATCTAGGGAGAAAGAGCTGATGGTGGAAGTATGGTGGTCACTATTGGGGGCAGCCATTCCAGCAGTAGTTGCAGGGCAAGCATACATAATGAGAAGAAGGCATTCTGAAGAACAAAAAATAAAGACCGCCAGGGGAAGAGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTATGTACATCAAAGAGAATGTTGAAAAAGGTCGGCTCTTTCTCAAAAGACCCGATTCCCGACACTTGTGTGACCGTCTGTGGAGTTTCTGAGCTCGATGCTTGCACGGATGCCTGTGCTCGCACGGTTTGTGTGAATCAACATCAAGTACCAAACTGGAATGATATTTGTCTTAGGAAATGTCAGAGTGAATGTCTTAAGCTTTCTGCTTCACGTTCATCTTAGTGAAATGGTATCATGTGTAGATGATGCAGTGTTTCATGGCATACCATGTATTGCATTTTGGGTTGCGAACGTTCATTGTCCAGGAATTTTTGGCTTTCTAGAGAAGATTTCAAATGTTTTGAAATGTTTCTTCCCTCATTTTACTCAAGTTTCTCTTGTTAGACAATGTTGCTTCTTAAACCTTTCTAATGGTTTGTACATATTTTCCCCTCCACGTCAACAAAATCATTGAGAAGGCTGCAACAATGAGTGTCTTTTTTTTTGTGGA

mRNA sequence

GAGAGAAACCTAGCCACTATTTGTTCCCATCTTGAAGCTTCATCTTCTTTAATGGCAATTATGAGTGAAGTATCGTCTCACATTCTGAACAATGGAGTAGGCTAGTCCGAACCACTTTACTCGCATCTAGGGAGAAAGAGCTGATGGTGGAAGTATGGTGGTCACTATTGGGGGCAGCCATTCCAGCAGTAGTTGCAGGGCAAGCATACATAATGAGAAGAAGGCATTCTGAAGAACAAAAAATAAAGACCGCCAGGGGAAGAGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTATGTACATCAAAGAGAATGTTGAAAAAGGTCGGCTCTTTCTCAAAAGACCCGATTCCCGACACTTGTGTGACCGTCTGTGGAGTTTCTGAGCTCGATGCTTGCACGGATGCCTGTGCTCGCACGGTTTGTGTGAATCAACATCAAGTACCAAACTGGAATGATATTTGTCTTAGGAAATGTCAGAGTGAATGTCTTAAGCTTTCTGCTTCACGTTCATCTTAGTGAAATGGTATCATGTGTAGATGATGCAGTGTTTCATGGCATACCATGTATTGCATTTTGGGTTGCGAACGTTCATTGTCCAGGAATTTTTGGCTTTCTAGAGAAGATTTCAAATGTTTTGAAATGTTTCTTCCCTCATTTTACTCAAGTTTCTCTTGTTAGACAATGTTGCTTCTTAAACCTTTCTAATGGTTTGTACATATTTTCCCCTCCACGTCAACAAAATCATTGAGAAGGCTGCAACAATGAGTGTCTTTTTTTTTGTGGA

Coding sequence (CDS)

ATGGTGGAAGTATGGTGGTCACTATTGGGGGCAGCCATTCCAGCAGTAGTTGCAGGGCAAGCATACATAATGAGAAGAAGGCATTCTGAAGAACAAAAAATAAAGACCGCCAGGGGAAGAGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTATGTACATCAAAGAGAATGTTGAAAAAGGTCGGCTCTTTCTCAAAAGACCCGATTCCCGACACTTGTGTGACCGTCTGTGGAGTTTCTGAGCTCGATGCTTGCACGGATGCCTGTGCTCGCACGGTTTGTGTGAATCAACATCAAGTACCAAACTGGAATGATATTTGTCTTAGGAAATGTCAGAGTGAATGTCTTAAGCTTTCTGCTTCACGTTCATCTTAG

Protein sequence

MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKLSASRSS

Homology

[Close]

BLAST of Sed0003177.3 vs. NCBI nr
Match: XP_023003218.1 (uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003219.1 uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003220.1 uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003221.1 uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023518716.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >XP_023518717.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >XP_023518718.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >XP_023518719.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >KAG6595036.1 hypothetical protein SDJN03_11589, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027059.1 hypothetical protein SDJN02_11068, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.8 bits (665), Expect = 6.2e-66
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 121 SASRSS 127
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.3 vs. NCBI nr
Match: XP_022962885.1 (uncharacterized protein At5g64816-like [Cucurbita moschata] >XP_022962886.1 uncharacterized protein At5g64816-like [Cucurbita moschata] >XP_022962887.1 uncharacterized protein At5g64816-like [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 1.4e-65
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSLLGAAIPAVVAGQAYIM+RRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMKRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 121 SASRSS 127
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.3 vs. NCBI nr
Match: XP_022132746.1 (uncharacterized protein At5g64816 [Momordica charantia])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWND+CLR+CQSECL+L
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLRL 120

Query: 121 SASRSS 127
           SASRSS
Sbjct: 121 SASRSS 126

[Close]

BLAST of Sed0003177.3 vs. NCBI nr
Match: XP_022950289.1 (uncharacterized protein At5g64816 isoform X2 [Cucurbita moschata] >XP_023544687.1 uncharacterized protein At5g64816 [Cucurbita pepo subsp. pepo] >KAG6604242.1 hypothetical protein SDJN03_04851, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQK+KTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCG+SELDACTDACARTVCVNQHQVPNWNDICLR+CQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKL 120

Query: 121 SASRSS 127
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.3 vs. NCBI nr
Match: XP_022950288.1 (uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata])

HSP 1 Score: 254.6 bits (649), Expect = 4.5e-64
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQK+KTARGREKNPDDIFVCERVCTSKRML
Sbjct: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCG+SELDACTDACARTVCVNQHQVPNWNDICLR+CQSECLKL
Sbjct: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKL 135

Query: 121 SASRSS 127
           SAS SS
Sbjct: 136 SASHSS 141

[Close]

BLAST of Sed0003177.3 vs. ExPASy Swiss-Prot
Match: Q8L8Q8 (Uncharacterized protein At5g64816 OS=Arabidopsis thaliana OX=3702 GN=At5g64816 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-59
Identity = 104/126 (82.54%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSL+GAA+PA++AGQA+ +++RH EE++IK+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVG+FSKDPIPDTCVTVCGVSELDAC+DACARTVCVNQHQV NWNDICLR+CQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 121 SASRSS 127
           S+S SS
Sbjct: 121 SSSSSS 126

[Close]

BLAST of Sed0003177.3 vs. ExPASy TrEMBL
Match: A0A6J1KSP5 (uncharacterized protein At5g64816 OS=Cucurbita maxima OX=3661 GN=LOC111496896 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.0e-66
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 121 SASRSS 127
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.3 vs. ExPASy TrEMBL
Match: A0A6J1HGB9 (uncharacterized protein At5g64816-like OS=Cucurbita moschata OX=3662 GN=LOC111463252 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 6.7e-66
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSLLGAAIPAVVAGQAYIM+RRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMKRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 121 SASRSS 127
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.3 vs. ExPASy TrEMBL
Match: A0A6J1BT56 (uncharacterized protein At5g64816 OS=Momordica charantia OX=3673 GN=LOC111005537 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.7e-65
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWND+CLR+CQSECL+L
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLRL 120

Query: 121 SASRSS 127
           SASRSS
Sbjct: 121 SASRSS 126

[Close]

BLAST of Sed0003177.3 vs. ExPASy TrEMBL
Match: A0A6J1GFD3 (uncharacterized protein At5g64816 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453421 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQK+KTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCG+SELDACTDACARTVCVNQHQVPNWNDICLR+CQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKL 120

Query: 121 SASRSS 127
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.3 vs. ExPASy TrEMBL
Match: A0A6J1GEH5 (uncharacterized protein At5g64816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453421 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQK+KTARGREKNPDDIFVCERVCTSKRML
Sbjct: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVGSFSKDPIPDTCVTVCG+SELDACTDACARTVCVNQHQVPNWNDICLR+CQSECLKL
Sbjct: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQSECLKL 135

Query: 121 SASRSS 127
           SAS SS
Sbjct: 136 SASHSS 141

[Close]

BLAST of Sed0003177.3 vs. TAIR 10
Match: AT5G64816.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-60
Identity = 104/126 (82.54%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSL+GAA+PA++AGQA+ +++RH EE++IK+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVG+FSKDPIPDTCVTVCGVSELDAC+DACARTVCVNQHQV NWNDICLR+CQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 121 SASRSS 127
           S+S SS
Sbjct: 121 SSSSSS 126

[Close]

BLAST of Sed0003177.3 vs. TAIR 10
Match: AT5G64816.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-60
Identity = 104/126 (82.54%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60
           MVEVWWSL+GAA+PA++AGQA+ +++RH EE++IK+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120
           KKVG+FSKDPIPDTCVTVCGVSELDAC+DACARTVCVNQHQV NWNDICLR+CQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 121 SASRSS 127
           S+S SS
Sbjct: 121 SSSSSS 126

The following BLAST results are available for this feature:

BLAST of Sed0003177.3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003218.1	6.2e-66	99.21	uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003219.1 uncharacter...	[more]
XP_022962885.1	1.4e-65	98.41	uncharacterized protein At5g64816-like [Cucurbita moschata] >XP_022962886.1 unch...	[more]
XP_022132746.1	1.2e-64	96.03	uncharacterized protein At5g64816 [Momordica charantia]	[more]
XP_022950289.1	4.5e-64	95.24	uncharacterized protein At5g64816 isoform X2 [Cucurbita moschata] >XP_023544687....	[more]
XP_022950288.1	4.5e-64	95.24	uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0003177.3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q8	2.6e-59	82.54	Uncharacterized protein At5g64816 OS=Arabidopsis thaliana OX=3702 GN=At5g64816 P...	[more]

BLAST of Sed0003177.3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSP5	3.0e-66	99.21	uncharacterized protein At5g64816 OS=Cucurbita maxima OX=3661 GN=LOC111496896 PE...	[more]
A0A6J1HGB9	6.7e-66	98.41	uncharacterized protein At5g64816-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1BT56	5.7e-65	96.03	uncharacterized protein At5g64816 OS=Momordica charantia OX=3673 GN=LOC111005537...	[more]
A0A6J1GFD3	2.2e-64	95.24	uncharacterized protein At5g64816 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1GEH5	2.2e-64	95.24	uncharacterized protein At5g64816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Sed0003177.3 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64816.1	1.9e-60	82.54	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G64816.2	1.9e-60	82.54	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038934	Uncharacterized protein At5g64816-like	PANTHER	PTHR35548	EXPRESSED PROTEIN	coord: 1..123
None	No IPR available	PANTHER	PTHR35548:SF3	SUBFAMILY NOT NAMED	coord: 1..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0003177	Sed0003177	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.3-three_prime_utr	Sed0003177.3-three_prime_utr-LG10:4335216..4335483	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.3-exon	Sed0003177.3-exon-LG10:4335216..4335884	exon
Sed0003177.3-exon	Sed0003177.3-exon-LG10:4339585..4339707	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.3-cds	Sed0003177.3-cds-LG10:4335484..4335864	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.3-five_prime_utr	Sed0003177.3-five_prime_utr-LG10:4335865..4335884	five_prime_UTR
Sed0003177.3-five_prime_utr	Sed0003177.3-five_prime_utr-LG10:4339585..4339707	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0003177.3	Sed0003177.3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding