Sed0003177.1 (mRNA) Chayote v1

Overview


Name	Sed0003177.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG10: 4335216 .. 4338778 (-)
Sequence length	1758
RNA-Seq Expression	Sed0003177.1
Synteny	Sed0003177.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATATATGCAAAAGCAATTCATAAAATTTTGACTAATTTCATTGCATGAAAGAAAGGGCATTATATGCTTCTCAAAAATTAAAAAAGAAAAAAATAATAAAGGGCACTATATAATAGATGACTAAGATAAGGAGTGTCAAGACCTTATCCAGCTAAAATCACAAGGGAAATTTCAGGGAAAAGGGAATAAGAATTAAGTGAAGAATAGGAAGGAAAATGGTTTGGTGAAAAATGATTGTTTGGGTTTGTGGTAAATGAAATAATTATGAAGAAAATGATCATTTTTGTTTGGGACAAATGAGAATATTATTAGAAAAATAAAATAATAAATATGATGAAATTGAAAAATAGTTACGAAAGGAATAAAAAGTTATTAGGAGATGACTAAAAAATAGTTATTAAAAGAATAAAAAAAAAAGTTATTTTTGAAAAAATGTGATTATAGAGAAAATAATTTTCAATGTCCCAAATATCGAGTATCACTCTCTCTCTCTCTCGATATATATAGAGTTAGATCCATATGTGGTCCTATAGGATTCTACGTTGTAGTGATGTTTATGATTTACGATAAAAACTAATTTTTCTCAAAAAAAAAAAAAAAAAAAAATCTAAGTTCAAAATTTTCAATTTTCAAATATTATTGTTGGAGAAGAAGAGAAGAGGGAGAAAGAAAAATTGAAAAAGTAACCGTACCGTTAAAGAAAATCTTATTTAAATAAAATTATTTGAAAAATGATGGTAAAAAAACTTTATCCAAAAAATGTTTTTAGAAGAGATGAAGTAGAAAAAAAAATTGTGATTCCAAAAAAAAAAAAACAAAATTTTTTTTCTGTAAACAAAATTGAGGTAGATTTTACAAATGTTGCACACTTGATAACCGAACCGACCGAACCAACCGAACCAAATGGCGGTTTGGGTTTAGGGCTTCTTCAGCTTAAGAACCAACATCGGCTCTCACCATTCCTTTCCACTCCCTCTTTTTCTTTCGCATTTATCGTCTCACTCAGTCGCCGTCGCCGTCGACTCATTCCGCCTTTGCTTCCGATCGGAAATTTCGCTGTCGCCGTCAACTCTCACCGTCTTCTAGGTTTCTCTAATCCTTTCGTGGGTATTTAATTAATCTATTAATCTTCGCTTCTGTTTGCTTTAGCTCTTATTTTGAACTGGGATCCCGTTCTTGCTATCATTCTTGAATTCATAATTGGCTCCATCTCTGGATTTTTTGTTGCTATTTTGCTGTTTCCCATTTCTTTCTTTTTGTTTCTTATCCTTTATCTCTGTGTTAATGTTATTTTGTTTCCTGTTTCTTTCTTCAATTCGGTTGGTTAGTTTGAATTTATCTAATTCAGAGCAATCAGAGACCACTTACCGAGTCCCCGAGCGGCAGCACAGTTGACTCGGGGACTCAGTTAGTTGAAAGGACAGACTTATGCCATCCTTGAGGTCCTACGTTCGAAACTCTCTCGTGATATTAATTTGTAGACTCTTTGATAGTCTAGTGGAGGGCAAGTGGGCCCCAGGTTTAGAGGAATCGCTTAGGGTGTGTTTGGGCTTCGTTTAGGTAAACGGCTGGGTTGGTTATAATAATAATTCAACCGATGTTTGAACGGTAGTTACCTAAAACTGCGTGCCCGTTTATTTAAACCTTGCATATATTACTTTTTGTTACAAAACTAGCTCCTCAAACATCGTTTATCATAACCTTCCGTCTATCATAACTAAACCGGTGCTCCAAACACACCTTTATTATTTTTGTATTTCACTATCGATGACCATCACTATCCTCAAGACTTAAAGGTTACAAAGATTTAAGCAAAACACAAATTAAAGAGACAATATGCATGAAGAAGAGAAGAAGCTAAGTAAATTGGCCATGACTTTCTCTATAATTCAACTCGTGACTGGGAGTTGAGTGAGTCATGGCTGTTTTCCATCGAAATGATAATTAGATTGACTTATATCTTTTGATTCCCTTCCACCTACTAATGATATTCTGACAACTCATTTCTAACTGTTATGGAGGGGACTAGTGGTCAACAAGGTCATAAGGAACTAAGTAGTGATGAGTACAATTCATGATGATCATCTATCTAGGATTAATTTCCTCCCGGTTTTCTTCACATCTAAATGTTGAATGGTCAGACGGTTTAGACTGTACTGTGAAAACAATCGAGGTGTACATGAGCTGGAAATAAATAAGAAAGAAAACGTTGGTTGCTATGTTTATAATCTCTGTATAAAAACAGTATTTTCTGTGATGTATGAGTTTAAATGGGCATGGATTTTGTTTATTCTTTCAAGTTTAACCAGTTCTTGAGAATATTTAATAAGTGTGAATGAATCGGCTGTGATATGTTTATCTGTGGTCTTATGAATAGTTCTTGAGAATTTATAATGTATTGCTCGGTCAAATTGAATAAAATATCAAGATGTCAACTTGCCATACTCTGTATCTCATTCTCAAAATTGCTCAAACTGACAACCAAATTCAAGGGCTTTGATTGATCAGGTTTTGAGCTTTATAGGCTTTCACTCTCACCCACCATAATTTGAGCTCACTAATCATCAGAATGCAGTTTAATAAAATTTTACTCGAACCAAAACTGGAGACAGATAATTACAAAATTTTCCAGAAGTTTAAATTGCTTCAATCCCTCAATTGCCAACAAGTCTCGAAGTATTCTATAGATGAAAATTGTAAATGGAAATATTCAAGCTGTTCTCCGAAGAGTAGAAGGAAATAGTTCTCTTTTATTCATGAGCTTTGCTTGTTTGATTTATGTCAAATTGCTTTGGAGGTTTAACTTTTTTTTTTAATAACTCATTAGGATGCCTTGGTCTTTTACAATTGAGACTTGTAAACAAACTCATTCTAGTTATTCTTTTGTGCAGCATCTAGGGAGAAAGAGCTGATGGTGGAAGTATGGTGGTCACTATTGGGGGCAGCCATTCCAGCAGTAGTTGCAGGGCAAGCATACATAATGAGAAGAAGGCATTCTGAAGAACAAAAAATAAAGACCGCCAGGGGAAGAGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTATGTACATCAAAGAGAATGTTGAAAAAGGTCGGCTCTTTCTCAAAAGACCCGATTCCCGACACTTGTGTGACCGTCTGTGGAGTTTCTGAGCTCGATGCTTGCACGGATGCCTGTGCTCGCACGGTTTGTGTGAATCAACATCAAGTACCAAACTGGAATGATATTTGTCTTAGGAAATGTCAGAGTGAATGTCTTAAGCTTTCTGCTTCACGTTCATCTTAGTGAAATGGTATCATGTGTAGATGATGCAGTGTTTCATGGCATACCATGTATTGCATTTTGGGTTGCGAACGTTCATTGTCCAGGAATTTTTGGCTTTCTAGAGAAGATTTCAAATGTTTTGAAATGTTTCTTCCCTCATTTTACTCAAGTTTCTCTTGTTAGACAATGTTGCTTCTTAAACCTTTCTAATGGTTTGTACATATTTTCCCCTCCACGTCAACAAAATCATTGAGAAGGCTGCAACAATGAGTGTCTTTTTTTTTGTGGA

mRNA sequence

ATCATATATGCAAAAGCAATTCATAAAATTTTGACTAATTTCATTGCATGAAAGAAAGGGCATTATATGCTTCTCAAAAATTAAAAAAGAAAAAAATAATAAAGGGCACTATATAATAGATGACTAAGATAAGGAGTGTCAAGACCTTATCCAGCTAAAATCACAAGGGAAATTTCAGGGAAAAGGGAATAAGAATTAAGTGAAGAATAGGAAGGAAAATGGTTTGGTGAAAAATGATTGTTTGGGTTTGTGGTAAATGAAATAATTATGAAGAAAATGATCATTTTTGTTTGGGACAAATGAGAATATTATTAGAAAAATAAAATAATAAATATGATGAAATTGAAAAATAGTTACGAAAGGAATAAAAAGTTATTAGGAGATGACTAAAAAATAGTTATTAAAAGAATAAAAAAAAAAGTTATTTTTGAAAAAATGTGATTATAGAGAAAATAATTTTCAATGTCCCAAATATCGAGTATCACTCTCTCTCTCTCTCGATATATATAGAGTTAGATCCATATGTGGTCCTATAGGATTCTACGTTGTAGTGATGTTTATGATTTACGATAAAAACTAATTTTTCTCAAAAAAAAAAAAAAAAAAAAATCTAAGTTCAAAATTTTCAATTTTCAAATATTATTGTTGGAGAAGAAGAGAAGAGGGAGAAAGAAAAATTGAAAAAGTAACCGTACCGTTAAAGAAAATCTTATTTAAATAAAATTATTTGAAAAATGATGGTAAAAAAACTTTATCCAAAAAATGTTTTTAGAAGAGATGAAGTAGAAAAAAAAATTGTGATTCCAAAAAAAAAAAAACAAAATTTTTTTTCTGTAAACAAAATTGAGGTAGATTTTACAAATGTTGCACACTTGATAACCGAACCGACCGAACCAACCGAACCAAATGGCGGTTTGGGTTTAGGGCTTCTTCAGCTTAAGAACCAACATCGGCTCTCACCATTCCTTTCCACTCCCTCTTTTTCTTTCGCATTTATCGTCTCACTCAGTCGCCGTCGCCGTCGACTCATTCCGCCTTTGCTTCCGATCGGAAATTTCGCTGTCGCCGTCAACTCTCACCGTCTTCTAGCATCTAGGGAGAAAGAGCTGATGGTGGAAGTATGGTGGTCACTATTGGGGGCAGCCATTCCAGCAGTAGTTGCAGGGCAAGCATACATAATGAGAAGAAGGCATTCTGAAGAACAAAAAATAAAGACCGCCAGGGGAAGAGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTATGTACATCAAAGAGAATGTTGAAAAAGGTCGGCTCTTTCTCAAAAGACCCGATTCCCGACACTTGTGTGACCGTCTGTGGAGTTTCTGAGCTCGATGCTTGCACGGATGCCTGTGCTCGCACGGTTTGTGTGAATCAACATCAAGTACCAAACTGGAATGATATTTGTCTTAGGAAATGTCAGAGTGAATGTCTTAAGCTTTCTGCTTCACGTTCATCTTAGTGAAATGGTATCATGTGTAGATGATGCAGTGTTTCATGGCATACCATGTATTGCATTTTGGGTTGCGAACGTTCATTGTCCAGGAATTTTTGGCTTTCTAGAGAAGATTTCAAATGTTTTGAAATGTTTCTTCCCTCATTTTACTCAAGTTTCTCTTGTTAGACAATGTTGCTTCTTAAACCTTTCTAATGGTTTGTACATATTTTCCCCTCCACGTCAACAAAATCATTGAGAAGGCTGCAACAATGAGTGTCTTTTTTTTTGTGGA

Coding sequence (CDS)

ATGATGGTAAAAAAACTTTATCCAAAAAATGTTTTTAGAAGAGATGAAGTAGAAAAAAAAATTGTGATTCCAAAAAAAAAAAAACAAAATTTTTTTTCTGTAAACAAAATTGAGGTAGATTTTACAAATGTTGCACACTTGATAACCGAACCGACCGAACCAACCGAACCAAATGGCGGTTTGGGTTTAGGGCTTCTTCAGCTTAAGAACCAACATCGGCTCTCACCATTCCTTTCCACTCCCTCTTTTTCTTTCGCATTTATCGTCTCACTCAGTCGCCGTCGCCGTCGACTCATTCCGCCTTTGCTTCCGATCGGAAATTTCGCTGTCGCCGTCAACTCTCACCGTCTTCTAGCATCTAGGGAGAAAGAGCTGATGGTGGAAGTATGGTGGTCACTATTGGGGGCAGCCATTCCAGCAGTAGTTGCAGGGCAAGCATACATAATGAGAAGAAGGCATTCTGAAGAACAAAAAATAAAGACCGCCAGGGGAAGAGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTATGTACATCAAAGAGAATGTTGAAAAAGGTCGGCTCTTTCTCAAAAGACCCGATTCCCGACACTTGTGTGACCGTCTGTGGAGTTTCTGAGCTCGATGCTTGCACGGATGCCTGTGCTCGCACGGTTTGTGTGAATCAACATCAAGTACCAAACTGGAATGATATTTGTCTTAGGAAATGTCAGAGTGAATGTCTTAAGCTTTCTGCTTCACGTTCATCTTAG

Protein sequence

MMVKKLYPKNVFRRDEVEKKIVIPKKKKQNFFSVNKIEVDFTNVAHLITEPTEPTEPNGGLGLGLLQLKNQHRLSPFLSTPSFSFAFIVSLSRRRRRLIPPLLPIGNFAVAVNSHRLLASREKELMVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKLSASRSS

Homology

[Close]

BLAST of Sed0003177.1 vs. NCBI nr
Match: XP_022950288.1 (uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata])

HSP 1 Score: 261.9 bits (668), Expect = 5.6e-66
Identity = 124/139 (89.21%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 113 NSHRLLASREKELMVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDI 172
           N+  L     +ELMVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQK+KTARGREKNPDDI
Sbjct: 3   NTRMLQHQGRRELMVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDI 62

Query: 173 FVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWND 232
           FVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCG+SELDACTDACARTVCVNQHQVPNWND
Sbjct: 63  FVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWND 122

Query: 233 ICLRKCQSECLKLSASRSS 252
           ICLR+CQSECLKLSAS SS
Sbjct: 123 ICLRRCQSECLKLSASHSS 141

[Close]

BLAST of Sed0003177.1 vs. NCBI nr
Match: XP_023003218.1 (uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003219.1 uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003220.1 uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003221.1 uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023518716.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >XP_023518717.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >XP_023518718.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >XP_023518719.1 uncharacterized protein At5g64816-like [Cucurbita pepo subsp. pepo] >KAG6595036.1 hypothetical protein SDJN03_11589, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027059.1 hypothetical protein SDJN02_11068, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 9.5e-66
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 246 SASRSS 252
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.1 vs. NCBI nr
Match: XP_022977947.1 (uncharacterized protein At5g64816-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-65
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 98  LIPPLLP-IGNFAVAVNSHRLLASREKELMVEVWWSLLGAAIPAVVAGQAYIMRRRHSEE 157
           LIPP  P +  F +   S        +ELMVEVWWS+LGAAIPAVVAGQAY MRRRHSEE
Sbjct: 45  LIPPEPPSLRGFGLTFYSCCFRIQGRRELMVEVWWSILGAAIPAVVAGQAYRMRRRHSEE 104

Query: 158 QKIKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGVSELDACTDAC 217
           QKIKTARGREKNP+DIFVCERVCTSKRMLKKVGSFSKDPIPDTC+TVCG+SELDACTDAC
Sbjct: 105 QKIKTARGREKNPEDIFVCERVCTSKRMLKKVGSFSKDPIPDTCMTVCGLSELDACTDAC 164

Query: 218 ARTVCVNQHQVPNWNDICLRKCQSECLKLSASRSS 252
           ARTVCVNQHQVPNWNDICLR+CQSECLKLSAS SS
Sbjct: 165 ARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 199

[Close]

BLAST of Sed0003177.1 vs. NCBI nr
Match: XP_022962885.1 (uncharacterized protein At5g64816-like [Cucurbita moschata] >XP_022962886.1 uncharacterized protein At5g64816-like [Cucurbita moschata] >XP_022962887.1 uncharacterized protein At5g64816-like [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 2.1e-65
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSLLGAAIPAVVAGQAYIM+RRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMKRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 246 SASRSS 252
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.1 vs. NCBI nr
Match: XP_022132746.1 (uncharacterized protein At5g64816 [Momordica charantia])

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWND+CLR+CQSECL+L
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLRL 120

Query: 246 SASRSS 252
           SASRSS
Sbjct: 121 SASRSS 126

[Close]

BLAST of Sed0003177.1 vs. ExPASy Swiss-Prot
Match: Q8L8Q8 (Uncharacterized protein At5g64816 OS=Arabidopsis thaliana OX=3702 GN=At5g64816 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.0e-59
Identity = 104/126 (82.54%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSL+GAA+PA++AGQA+ +++RH EE++IK+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVG+FSKDPIPDTCVTVCGVSELDAC+DACARTVCVNQHQV NWNDICLR+CQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 246 SASRSS 252
           S+S SS
Sbjct: 121 SSSSSS 126

[Close]

BLAST of Sed0003177.1 vs. ExPASy TrEMBL
Match: A0A6J1GEH5 (uncharacterized protein At5g64816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453421 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.7e-66
Identity = 124/139 (89.21%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 113 NSHRLLASREKELMVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDI 172
           N+  L     +ELMVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQK+KTARGREKNPDDI
Sbjct: 3   NTRMLQHQGRRELMVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDI 62

Query: 173 FVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWND 232
           FVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCG+SELDACTDACARTVCVNQHQVPNWND
Sbjct: 63  FVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWND 122

Query: 233 ICLRKCQSECLKLSASRSS 252
           ICLR+CQSECLKLSAS SS
Sbjct: 123 ICLRRCQSECLKLSASHSS 141

[Close]

BLAST of Sed0003177.1 vs. ExPASy TrEMBL
Match: A0A6J1KSP5 (uncharacterized protein At5g64816 OS=Cucurbita maxima OX=3661 GN=LOC111496896 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.6e-66
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 246 SASRSS 252
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.1 vs. ExPASy TrEMBL
Match: A0A6J1IJU3 (uncharacterized protein At5g64816-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478087 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 6.0e-66
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 98  LIPPLLP-IGNFAVAVNSHRLLASREKELMVEVWWSLLGAAIPAVVAGQAYIMRRRHSEE 157
           LIPP  P +  F +   S        +ELMVEVWWS+LGAAIPAVVAGQAY MRRRHSEE
Sbjct: 45  LIPPEPPSLRGFGLTFYSCCFRIQGRRELMVEVWWSILGAAIPAVVAGQAYRMRRRHSEE 104

Query: 158 QKIKTARGREKNPDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGVSELDACTDAC 217
           QKIKTARGREKNP+DIFVCERVCTSKRMLKKVGSFSKDPIPDTC+TVCG+SELDACTDAC
Sbjct: 105 QKIKTARGREKNPEDIFVCERVCTSKRMLKKVGSFSKDPIPDTCMTVCGLSELDACTDAC 164

Query: 218 ARTVCVNQHQVPNWNDICLRKCQSECLKLSASRSS 252
           ARTVCVNQHQVPNWNDICLR+CQSECLKLSAS SS
Sbjct: 165 ARTVCVNQHQVPNWNDICLRRCQSECLKLSASHSS 199

[Close]

BLAST of Sed0003177.1 vs. ExPASy TrEMBL
Match: A0A6J1HGB9 (uncharacterized protein At5g64816-like OS=Cucurbita moschata OX=3662 GN=LOC111463252 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.0e-65
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSLLGAAIPAVVAGQAYIM+RRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAYIMKRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 120

Query: 246 SASRSS 252
           SAS SS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Sed0003177.1 vs. ExPASy TrEMBL
Match: A0A6J1BT56 (uncharacterized protein At5g64816 OS=Momordica charantia OX=3673 GN=LOC111005537 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.7e-65
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWS+LGAAIPAVVAGQAY MRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWND+CLR+CQSECL+L
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLRL 120

Query: 246 SASRSS 252
           SASRSS
Sbjct: 121 SASRSS 126

[Close]

BLAST of Sed0003177.1 vs. TAIR 10
Match: AT5G64816.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-60
Identity = 104/126 (82.54%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSL+GAA+PA++AGQA+ +++RH EE++IK+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVG+FSKDPIPDTCVTVCGVSELDAC+DACARTVCVNQHQV NWNDICLR+CQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 246 SASRSS 252
           S+S SS
Sbjct: 121 SSSSSS 126

[Close]

BLAST of Sed0003177.1 vs. TAIR 10
Match: AT5G64816.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-60
Identity = 104/126 (82.54%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 126 MVEVWWSLLGAAIPAVVAGQAYIMRRRHSEEQKIKTARGREKNPDDIFVCERVCTSKRML 185
           MVEVWWSL+GAA+PA++AGQA+ +++RH EE++IK+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 186 KKVGSFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDICLRKCQSECLKL 245
           KKVG+FSKDPIPDTCVTVCGVSELDAC+DACARTVCVNQHQV NWNDICLR+CQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 246 SASRSS 252
           S+S SS
Sbjct: 121 SSSSSS 126

The following BLAST results are available for this feature:

BLAST of Sed0003177.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950288.1	5.6e-66	89.21	uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata]	[more]
XP_023003218.1	9.5e-66	99.21	uncharacterized protein At5g64816 [Cucurbita maxima] >XP_023003219.1 uncharacter...	[more]
XP_022977947.1	1.2e-65	82.58	uncharacterized protein At5g64816-like isoform X1 [Cucurbita maxima]	[more]
XP_022962885.1	2.1e-65	98.41	uncharacterized protein At5g64816-like [Cucurbita moschata] >XP_022962886.1 unch...	[more]
XP_022132746.1	1.8e-64	96.03	uncharacterized protein At5g64816 [Momordica charantia]	[more]

BLAST of Sed0003177.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q8	4.0e-59	82.54	Uncharacterized protein At5g64816 OS=Arabidopsis thaliana OX=3702 GN=At5g64816 P...	[more]

BLAST of Sed0003177.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEH5	2.7e-66	89.21	uncharacterized protein At5g64816 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KSP5	4.6e-66	99.21	uncharacterized protein At5g64816 OS=Cucurbita maxima OX=3661 GN=LOC111496896 PE...	[more]
A0A6J1IJU3	6.0e-66	82.58	uncharacterized protein At5g64816-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HGB9	1.0e-65	98.41	uncharacterized protein At5g64816-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1BT56	8.7e-65	96.03	uncharacterized protein At5g64816 OS=Momordica charantia OX=3673 GN=LOC111005537...	[more]

BLAST of Sed0003177.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64816.1	2.8e-60	82.54	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G64816.2	2.8e-60	82.54	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35548:SF3	SUBFAMILY NOT NAMED	coord: 126..248
IPR038934	Uncharacterized protein At5g64816-like	PANTHER	PTHR35548	EXPRESSED PROTEIN	coord: 126..248

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0003177	Sed0003177	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.1-three_prime_utr	Sed0003177.1-three_prime_utr-LG10:4335216..4335483	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.1-exon	Sed0003177.1-exon-LG10:4335216..4335884	exon
Sed0003177.1-exon	Sed0003177.1-exon-LG10:4337690..4338778	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.1-cds	Sed0003177.1-cds-LG10:4335484..4335884	CDS
Sed0003177.1-cds	Sed0003177.1-cds-LG10:4337690..4338044	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0003177.1-five_prime_utr	Sed0003177.1-five_prime_utr-LG10:4338045..4338778	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0003177.1	Sed0003177.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding