Sed0002167.1 (mRNA) Chayote v1

Overview


Name	Sed0002167.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin
Location	LG05: 7578707 .. 7580857 (+)
Sequence length	393
RNA-Seq Expression	Sed0002167.1
Synteny	Sed0002167.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAAGCCATTCCTTACCGATCATGGCACCAATCCATTGACATCAAACCAACCCCGGCCCCCCCATTGCCACGGCCCGCTCAATCGTGGCGCGATGTGCGCTTGTCCGTGTCCGAGAGCGCCGCCATAGTGTTTGCTAGAAGAGGCTGCTGCATGAGCCATGCGCTCAAGAGCCTGCTTCTCGGCCTCGGCGCCAACCCGGCCGTCTACGAGGTCGAGGAGGATCGGGAATCGGGCGTGATCCAGGAATTGGAGGCCATCGCGCAATTCAAGGTTCAACTGCCCGCGGTGTTCATTGGTGGGGCCTTGTTTGGGGGCTTGGATCGAGTCGTCGCTACTCATATTTCTGGCGATTTGGTTCCCATTTTGAAACAGGCTGGCGCTTTGTGGCTTTGAATTACTTCACTTTTTTCTTTTTTATTTTATATATTATTCTTCCCCCCCTTTTAATCAAATCACAGGATTTTGTTTGCTTTAATTTAGGTTGTCAATCCCTATCCCTTTTTTTCCCCCTCTCCCCCCCTCTCTAATTGGAGTTCATTATTTCTGAATTTCTTTTTTAATTTAATAACAATATTTATGTGGATTTTTTTTTAATAAAAATTTAATATCCAGGATTCCAACCTTGGTTACCGAATTTTAGAATTATACTTTGGTTGGTTCTCATAAACTCATTTGACTTACCTATTGTAGTTTTTATTATGTATTGTCTTTGTCTAATTTTAATTTACTTTAAATAAAGTTTAAAATCAATAGTCCTGTTATTAGAAAAAAGAAAATTCAGTCGTTAAAAAATTTAATCCTAATTAATCCTTCTTCAACTAATTTTAATAAAAGAAAATTCAGTCGTTAATAGGTGTTTCAAAAAAAAAAACAAATTTAATAAAAGTTTATTTATTTATTGAAGTTAATTAAATAATAATTTTAATATAATAAAAATTAGTGGTGCAATTAACCTTTTTTTTTTTTTTTACAAAAACTATAAAAAAATTAATTTAAGTTTCATGGAAAGTATAATAATCTTAATAAAATAGATTTGAAGGCACATGCCAAAAAGTTATTTTAAACTAATATAATAACAAAGGCCTTATAATGTTTGGGCAGTTCCTGCAAAGTCAATGTTTAGACATACCCAAAAAGGTTGGCTCTTTTTATTTATTTATTTATTTATTCTCTATATATATATATTTTGAGATTATTTATTTTATATATTTGAGAGTTCTAAAAATATATACCTTCGTTGTGATTTCTTTTATCTTTTTTAAATTATTTTTGTATTCCGTGTGATTTAAGGCGACGAGAATTATTTTCAAAAAAAACAAAAAACGACGTTATTTAATCTAATTCAAATTTTGCTGACGTTATTTTAAAATTTATTTATATACCAAATGCTTTTTTTTTTAAATTTTTGAAACCATATACCAAATGTCAAGAGGAAAATTTAAACCTTTAATCTTTTTTTTATTTTTTTTTTTAAATAAGTTCATATACCATTTACTGTAGAATGAAAATCTGGAAGGTTATTTATTGATAATTGGAAGGTTCTTTTTTTTTTTGGTAAAATAATTTGGAAGGTTATTTAAAGTAACATGAATATTGTTAGGGTGAATTAAAAATAAATAAATAAATTAATGTATTTTTAAAAATTACAACGGTAATACTGATGTCCTGTCGTCAAAAGGGGTAAATTGTGTAACGTGCATTATTTTTTGGAAGCATCTAGATTTGGAATTGAAAAACCTGGGATAGGTAAGAAGTTGACTAATTTAATTAAGCCGCATAATTAAAAATAAATAAATAATGTGTAACTCAATTGGTATATACAATTACAAGTTCTTTTAGTTCAGTTCTCCATTCCTTTGATGCGCTATGAAAATATGGTTTTTTAAGATATCCACAAAGATTTATTTTTTTTAAAAAAACAACATACATAGATTTTATTACTTCTCAAAATTGTGTTTGGAGGGTTTGAATGAGAATGAGGGGAAATTATGAGAAAAAATTATTATTCATATTTAAGAGTAATGCTTATTGAAAGACAACCTTTACTAGATGAAAAAAACAATTGTGAAGAAAATGAAATAGTGAATATGAAAAAAATGAAAATTTATCAAGAATAAAATTAAAAAGAAGTTATGGAGAAAATAG

mRNA sequence

ATGCACCAAGCCATTCCTTACCGATCATGGCACCAATCCATTGACATCAAACCAACCCCGGCCCCCCCATTGCCACGGCCCGCTCAATCGTGGCGCGATGTGCGCTTGTCCGTGTCCGAGAGCGCCGCCATAGTGTTTGCTAGAAGAGGCTGCTGCATGAGCCATGCGCTCAAGAGCCTGCTTCTCGGCCTCGGCGCCAACCCGGCCGTCTACGAGGTCGAGGAGGATCGGGAATCGGGCGTGATCCAGGAATTGGAGGCCATCGCGCAATTCAAGGTTCAACTGCCCGCGGTGTTCATTGGTGGGGCCTTGTTTGGGGGCTTGGATCGAGTCGTCGCTACTCATATTTCTGGCGATTTGAATAAAATTAAAAAGAAGTTATGGAGAAAATAG

Coding sequence (CDS)

ATGCACCAAGCCATTCCTTACCGATCATGGCACCAATCCATTGACATCAAACCAACCCCGGCCCCCCCATTGCCACGGCCCGCTCAATCGTGGCGCGATGTGCGCTTGTCCGTGTCCGAGAGCGCCGCCATAGTGTTTGCTAGAAGAGGCTGCTGCATGAGCCATGCGCTCAAGAGCCTGCTTCTCGGCCTCGGCGCCAACCCGGCCGTCTACGAGGTCGAGGAGGATCGGGAATCGGGCGTGATCCAGGAATTGGAGGCCATCGCGCAATTCAAGGTTCAACTGCCCGCGGTGTTCATTGGTGGGGCCTTGTTTGGGGGCTTGGATCGAGTCGTCGCTACTCATATTTCTGGCGATTTGAATAAAATTAAAAAGAAGTTATGGAGAAAATAG

Protein sequence

MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAIAQFKVQLPAVFIGGALFGGLDRVVATHISGDLNKIKKKLWRK

Homology

[Close]

BLAST of Sed0002167.1 vs. NCBI nr
Match: XP_022947652.1 (glutaredoxin-C9-like [Cucurbita moschata])

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-38
Identity = 95/134 (70.90%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M+QAIPYR    SID K +      R + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 1   MNQAIPYR----SIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 60

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 61  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHIS 120

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 121 GDLVPILKQAGALW 130

[Close]

BLAST of Sed0002167.1 vs. NCBI nr
Match: XP_023533950.1 (glutaredoxin-C9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 94/134 (70.15%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M+QAIPYR    SID K +        + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 7   MNQAIPYR----SIDTKQSLVSAAFGGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 66

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 67  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGKGKVELPAVFIGGALFGGLERVMATHIS 126

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 127 GDLVPILKQAGALW 136

[Close]

BLAST of Sed0002167.1 vs. NCBI nr
Match: XP_022971131.1 (glutaredoxin-C9-like [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 94/134 (70.15%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M+QAIPYR    SI  K +      R + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 1   MNQAIPYR----SIGTKQSRVSVAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 60

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 61  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHIS 120

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 121 GDLVPILKQAGALW 130

[Close]

BLAST of Sed0002167.1 vs. NCBI nr
Match: KAG6604884.1 (Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.2 bits (422), Expect = 9.7e-38
Identity = 93/134 (69.40%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M++AIPYR    +ID K +      R + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 1   MNRAIPYR----TIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 60

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 61  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHIS 120

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 121 GDLVPILKQAGALW 130

[Close]

BLAST of Sed0002167.1 vs. NCBI nr
Match: KAG7026967.1 (Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37
Identity = 93/134 (69.40%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M++AIPYR    +ID K        R + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 1   MNRAIPYR----TIDTKQRLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 60

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 61  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHIS 120

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 121 GDLVPILKQAGALW 130

[Close]

BLAST of Sed0002167.1 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-24
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 34  VRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAI----A 93
           VR+ V E+A IV  RRGCCM H ++ LLLGLG NPAV E++E+RE  V+ ELE I     
Sbjct: 35  VRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGG 94

Query: 94  QFKVQLPAVFIGGALFGGLDRVVATHISGDLNKIKKKL 128
              V+LPAV++GG LFGGLDRV+ATHISG+L  I K++
Sbjct: 95  GGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEV 132

[Close]

BLAST of Sed0002167.1 vs. ExPASy Swiss-Prot
Match: P0C291 (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.7e-22
Identity = 64/136 (47.06%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 1   MHQAIPY---RSW-HQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHA 60
           M+QAIPY   R+W   S       APP P P     +VR +V+E   +V  R GCC+SH 
Sbjct: 1   MYQAIPYNANRAWPAASRPATAAAAPPPPPPRGEEEEVRRAVAECPVVVVGRSGCCLSHV 60

Query: 61  LKSLLLGLGANPAVYEVEEDRE-SGVIQELEAIAQFKVQLPAVFIGGALFGGLDRVVATH 120
           +K LL GLG NPAV+EV  + E +GV+     +A     LPAVF+GG L GGLDR++A H
Sbjct: 61  VKRLLQGLGVNPAVHEVAGEAELAGVVAGGGGVA-----LPAVFVGGRLLGGLDRLMAVH 120

Query: 121 ISGDLNKIKKK---LW 129
           ISG+L  I K+   LW
Sbjct: 121 ISGELVPILKEAGALW 131

[Close]

BLAST of Sed0002167.1 vs. ExPASy Swiss-Prot
Match: Q5QLR2 (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17
Identity = 52/100 (52.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 33  DVRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVE-EDRESGVIQELEAIAQF 92
           +VR +V+ES  +V  RRGCC+ H +K LL GLG NPAV+EV  E    GV+      A  
Sbjct: 51  EVRRAVAESPVLVVGRRGCCLIHVVKRLLQGLGVNPAVHEVAGEAALKGVVPAGGEAA-- 110

Query: 93  KVQLPAVFIGGALFGGLDRVVATHISGDLNKIKKK---LW 129
              LPAVF+GG L GGLDR++A HISG+L  I KK   LW
Sbjct: 111 --ALPAVFVGGKLLGGLDRLMAVHISGELVPILKKAGALW 146

[Close]

BLAST of Sed0002167.1 vs. ExPASy Swiss-Prot
Match: Q84TF4 (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-16
Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 19  TPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRE 78
           T   P P    + R   L V E+A +VFARRGCC+ H  K LLL  G NP V E+ E+  
Sbjct: 41  TSGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 100

Query: 79  SGVIQELEAIAQFKVQLPAVFIGGALFGGLDRVVATHISGDL 121
           +      + I   K +LP ++IGG LFGGL+ ++A HI+GDL
Sbjct: 101 N----NYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDL 138

[Close]

BLAST of Sed0002167.1 vs. ExPASy Swiss-Prot
Match: Q0JP62 (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-16
Identity = 49/121 (40.50%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 28  AQSWRDVRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEA 87
           A   R+VR +V E   +V  RRGCCM+H  + LLLG GANPAV EV +D +   + +   
Sbjct: 15  ADEEREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGDDADPAALVDAAL 74

Query: 88  IAQFK-----------------VQLPAVFIGGALFGGLDRVVATHISGDLNKIKKK---L 129
            A+ +                 V  PAVFIGG L GGLDR++A H++G+L  + K+   L
Sbjct: 75  QARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVPVLKQAGAL 134

[Close]

BLAST of Sed0002167.1 vs. ExPASy TrEMBL
Match: A0A6J1G719 (glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 7.2e-39
Identity = 95/134 (70.90%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M+QAIPYR    SID K +      R + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 1   MNQAIPYR----SIDTKQSLVSAAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 60

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 61  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHIS 120

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 121 GDLVPILKQAGALW 130

[Close]

BLAST of Sed0002167.1 vs. ExPASy TrEMBL
Match: A0A6J1I2G5 (glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111469896 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.7e-38
Identity = 94/134 (70.15%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSL 60
           M+QAIPYR    SI  K +      R + SWRDV  SVSESAAIVFARRGCCMSH +K L
Sbjct: 1   MNQAIPYR----SIGTKQSRVSVAFRGSGSWRDVSASVSESAAIVFARRGCCMSHVVKRL 60

Query: 61  LLGLGANPAVYEVEEDRESGVIQELEAIAQF---KVQLPAVFIGGALFGGLDRVVATHIS 120
           LLGLGANPAVYEVEED ESGV++ELEAIAQ    KV+LPAVFIGGALFGGL+RV+ATHIS
Sbjct: 61  LLGLGANPAVYEVEEDEESGVVEELEAIAQLGNGKVELPAVFIGGALFGGLERVMATHIS 120

Query: 121 GDLNKIKKK---LW 129
           GDL  I K+   LW
Sbjct: 121 GDLVPILKQAGALW 130

[Close]

BLAST of Sed0002167.1 vs. ExPASy TrEMBL
Match: A0A5A7VGI4 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001510 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.4e-36
Identity = 95/148 (64.19%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQS--------------WRDVRLSVSESAAIVF 60
           MHQAIPYRSW QSID K T     P  A S               RDV  SVSESAAIVF
Sbjct: 1   MHQAIPYRSW-QSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVF 60

Query: 61  ARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAIAQ---FKVQLPAVFIGGA 120
           ARRGCCMSH +K LLLGLGANPAVYEV+E+ ESGV++ELEA A+     +QLPAVFIGG 
Sbjct: 61  ARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVVKELEAFAKSSNVNLQLPAVFIGGT 120

Query: 121 LFGGLDRVVATHISGDLNKIKKK---LW 129
           LFGGLDRV+ATHISGDL  I K+   LW
Sbjct: 121 LFGGLDRVMATHISGDLVPILKQAGALW 147

[Close]

BLAST of Sed0002167.1 vs. ExPASy TrEMBL
Match: A0A5D3CE70 (Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00610 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.7e-36
Identity = 95/148 (64.19%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQS--------------WRDVRLSVSESAAIVF 60
           MHQAIPYRSW QSID K T     P  A S               RDV  SVSESAAIVF
Sbjct: 1   MHQAIPYRSW-QSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVF 60

Query: 61  ARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAIAQ---FKVQLPAVFIGGA 120
           ARRGCCMSH +K LLLGLGANPAVYEV+E+ ESGV++ELEA A+     +QLPAVFIGG 
Sbjct: 61  ARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGT 120

Query: 121 LFGGLDRVVATHISGDLNKIKKK---LW 129
           LFGGLDRV+ATHISGDL  I K+   LW
Sbjct: 121 LFGGLDRVMATHISGDLVPILKQAGALW 147

[Close]

BLAST of Sed0002167.1 vs. ExPASy TrEMBL
Match: A0A1S3C224 (glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.7e-36
Identity = 95/148 (64.19%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 1   MHQAIPYRSWHQSIDIKPTPAPPLPRPAQS--------------WRDVRLSVSESAAIVF 60
           MHQAIPYRSW QSID K T     P  A S               RDV  SVSESAAIVF
Sbjct: 1   MHQAIPYRSW-QSIDTKQTTLAMRPPWAGSVGGSASMPSEGGGRRRDVVASVSESAAIVF 60

Query: 61  ARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAIAQ---FKVQLPAVFIGGA 120
           ARRGCCMSH +K LLLGLGANPAVYEV+E+ ESGV++ELEA A+     +QLPAVFIGG 
Sbjct: 61  ARRGCCMSHVVKRLLLGLGANPAVYEVDEEHESGVLKELEAFAKSSNVNLQLPAVFIGGT 120

Query: 121 LFGGLDRVVATHISGDLNKIKKK---LW 129
           LFGGLDRV+ATHISGDL  I K+   LW
Sbjct: 121 LFGGLDRVMATHISGDLVPILKQAGALW 147

[Close]

BLAST of Sed0002167.1 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 34  VRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAI----A 93
           VR+ V E+A IV  RRGCCM H ++ LLLGLG NPAV E++E+RE  V+ ELE I     
Sbjct: 35  VRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGG 94

Query: 94  QFKVQLPAVFIGGALFGGLDRVVATHISGDLNKIKKKL 128
              V+LPAV++GG LFGGLDRV+ATHISG+L  I K++
Sbjct: 95  GGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEV 132

[Close]

BLAST of Sed0002167.1 vs. TAIR 10
Match: AT1G03850.1 (Glutaredoxin family protein )

HSP 1 Score: 87.8 bits (216), Expect = 6.9e-18
Identity = 46/110 (41.82%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 19  TPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRE 78
           T   P P    + R   L V E+A +VFARRGCC+ H  K LLL  G NP V E+ E+  
Sbjct: 41  TSGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 100

Query: 79  SGVIQELEAIAQFKVQLPAVFIGGALFGGLDRVVATHISGDLNKIKKKLW 129
           +      + I   K +LP ++IGG LFGGL+ ++A HI+G   KI+   W
Sbjct: 101 N----NYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGHSIKIRTDTW 146

[Close]

BLAST of Sed0002167.1 vs. TAIR 10
Match: AT1G03850.2 (Glutaredoxin family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17
Identity = 45/102 (44.12%), Postives = 60/102 (58.82%), Query Frame = 0


Query: 19  TPAPPLPRPAQSWRDVRLSVSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRE 78
           T   P P    + R   L V E+A +VFARRGCC+ H  K LLL  G NP V E+ E+  
Sbjct: 41  TSGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDN 100

Query: 79  SGVIQELEAIAQFKVQLPAVFIGGALFGGLDRVVATHISGDL 121
           +      + I   K +LP ++IGG LFGGL+ ++A HI+GDL
Sbjct: 101 N----NYDNIVSDKEKLPMMYIGGKLFGGLENLMAAHINGDL 138

[Close]

BLAST of Sed0002167.1 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 7.9e-14
Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 38  VSESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAIAQFKVQLPA 97
           +SE + ++F++  CCMSH +K+L L LG NP +YE++E      I+   A       +P 
Sbjct: 8   ISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCSPTVPV 67

Query: 98  VFIGGALFGGLDRVVATHISGDLNKIKKK---LW 129
           VFIGG L GG ++V++ H++  L  + K+   LW
Sbjct: 68  VFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALW 101

[Close]

BLAST of Sed0002167.1 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-13
Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 39  SESAAIVFARRGCCMSHALKSLLLGLGANPAVYEVEEDRESGVIQELEAIAQFKVQLPAV 98
           SE + ++F++  CCMSH +K+L L LG NP +YE++E      I++  A       +P V
Sbjct: 9   SEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLGCSPTVPVV 68

Query: 99  FIGGALFGGLDRVVATHISGDLNKIKKKL 128
           FIGG L GG ++V++ H++  L  + K++
Sbjct: 69  FIGGQLVGGANQVMSLHLNRSLIPMLKRV 97

The following BLAST results are available for this feature:

BLAST of Sed0002167.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947652.1	1.5e-38	70.90	glutaredoxin-C9-like [Cucurbita moschata]	[more]
XP_023533950.1	9.7e-38	70.15	glutaredoxin-C9-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971131.1	9.7e-38	70.15	glutaredoxin-C9-like [Cucurbita maxima]	[more]
KAG6604884.1	9.7e-38	69.40	Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7026967.1	1.6e-37	69.40	Glutaredoxin-C9, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0002167.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGP6	6.3e-24	58.16	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
P0C291	7.7e-22	47.06	Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS9 PE=3...	[more]
Q5QLR2	3.4e-17	52.00	Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS5 PE=2...	[more]
Q84TF4	2.2e-16	44.12	Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana OX=3702 GN=GRXS13 PE=2 SV=2	[more]
Q0JP62	2.8e-16	40.50	Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS3 PE=2...	[more]

BLAST of Sed0002167.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G719	7.2e-39	70.90	glutaredoxin-C9-like OS=Cucurbita moschata OX=3662 GN=LOC111451451 PE=3 SV=1	[more]
A0A6J1I2G5	4.7e-38	70.15	glutaredoxin-C9-like OS=Cucurbita maxima OX=3661 GN=LOC111469896 PE=3 SV=1	[more]
A0A5A7VGI4	4.4e-36	64.19	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G...	[more]
A0A5D3CE70	5.7e-36	64.19	Glutaredoxin-C9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757...	[more]
A0A1S3C224	5.7e-36	64.19	glutaredoxin-C9-like OS=Cucumis melo OX=3656 GN=LOC103496008 PE=3 SV=1	[more]

BLAST of Sed0002167.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28480.1	4.5e-25	58.16	Thioredoxin superfamily protein	[more]
AT1G03850.1	6.9e-18	41.82	Glutaredoxin family protein	[more]
AT1G03850.2	1.5e-17	44.12	Glutaredoxin family protein	[more]
AT4G15700.1	7.9e-14	37.23	Thioredoxin superfamily protein	[more]
AT4G15670.1	1.0e-13	37.08	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 44..103 e-value: 1.7E-7 score: 31.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 29..128 e-value: 1.7E-18 score: 68.3
None	No IPR available	PANTHER	PTHR10168:SF219	GLUTAREDOXIN-C9	coord: 32..126
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 31..130 score: 14.73132
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 35..126 e-value: 5.2E-29 score: 98.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 32..126
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 37..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0002167	Sed0002167	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002167.1-exon	Sed0002167.1-exon-LG05:7578707..7579066	exon
Sed0002167.1-exon	Sed0002167.1-exon-LG05:7580825..7580857	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0002167.1-cds	Sed0002167.1-cds-LG05:7578707..7579066	CDS
Sed0002167.1-cds	Sed0002167.1-cds-LG05:7580825..7580857	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0002167.1	Sed0002167.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity