Sed0001684.2 (mRNA) Chayote v1

Overview


Name	Sed0001684.2
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Dirigent protein
Location	LG04: 44627414 .. 44630559 (-)
Sequence length	3071
RNA-Seq Expression	Sed0001684.2
Synteny	Sed0001684.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCGAATGGTGGTTCAGCTCCGTCCGCTCTTGGGTATCCGCCGTTGTCTGGGGATGTTTGGATGCGGATTATATGAAACTTGGTACACCCTTTTACCGTTTCTATCATTTGAATTTATTTGATTCATATTTAAGTTTTTTTTTTTTTTAAATTTTATTTATTTTTAATGTGGAATCAAATTGGGAAAGTTAAGTTTACCTTTGAAGTTAGGTCCCATCCGTTGTTGCTTTTAGCTGGTGCAAATGTACAGAATCCTTCAAGAACTATAGTTTCACTAATCTTGTAGCTGTTTGGAAGAAATTTTTGCCCCCATTTAACTTGATGATCTATGTTTGTTGAGTTGCCTTGAGACTTGAAATATGATGTATTGATGTTAATAAGCCATCAACAACGAGGGGCTGCCAAATTTATTATTGTTCAACTTTATCCACTAGTTTTACACTCATTGGAGCATTGTTCATTTCATACTGATGAACTGACCATACGATATGTGTTTTTTTTGTAAAATTAAGAAACAGAAAAGGAAACAAACAACAAGAAATCAAAAAGTTGTTATCAAACAAGTTTTGTTCCTGTTTTTTAATCTTTGTAAGAAACAATAATATTGAATCATGTAAAACTTTGTGGTCATCTCTTCCAATTGTTCATATGATATCTACTTGGAATGCTAGTTCATGCAATTATGTAGTTCTAGCACCACAACTGGATGTTGATGGAAGTTTCCTGTACCTCACTATAACTTACTTCGTGGATTGCTCAATTCATGGAGTATTTTGGATCCAATTGTTCCTATGCAAATGGAGACACAAGGGCTGGTAAATTATCTCTTCCCCATAGATTTCGAACTTGATGATAACAAAAATGTTTTGAATATGAGATTTTCATGTGGGTTATGCATCAAGCAAGTGGCTTAATCTGCTTTGTGGGAGAAGGGACTTTTGTTGCGGCATGCGAGAGAAACAATAGAATCTTTTGAGGGTTGGAGAGATTTCCAGACGATATTAGATTCTATGTTTCTCTATGAGGTTCGATGATAATACTTTTTTTATAATTACATTTTAGGTCTTGTTTTGTTGGATTAGAAGCCCTTTTCATAGGTCTCTCTTTTTGTTTGCCTTATATTATTTCTTTTAATCTTAATGAATGCTCGGTTGTTAATTAAAAGAAAAATGATAATTTTTTTTTTCAGTTAGATAAACTCCACAGGACATTGTAGCTGTGTGTCAATGTGATAAAGAATCGATAAAACAATAGAGTTACAATTCTGACAGTCTGTGCATAATTTGGATTGATATATGTGAAAACTTTGTTTTTGTAGTCTTTTCATTCTGAATTTAATAGACAGGTACCCAGTTTTGGGATGAGCATTTTAATGCTTCAAAAAGGTTAGATCTACAAAATATGGAAAGATATGAGGCAATTCTTAGCAATGCTTTCTGATTTTATCGAATATAGAGTGGCTCAATTTTATGATTGGAACATCAATCATGGGTTGACCCAACAGTGAAAGAGGGTCAGGAAGATGTAAGAGTGTCATGAATTCAATCTATATTGATTACTTACCTAGTAATTTTCTATGTGTTTCTTTCGCATCCAATTTTAGAATAAATGAGTGATATTTTACTTTTTTACGAGCCTCTGATTTGCCTGGCTGTGTGTTTCTGAAATGACATCTCACTTGGACTCTTGCTGTGTACATGTGTGCCTTGTTTGTTTCAGAATGGACATTTCTTTGCCTGTGAACACAAGGTCATCCACTCAATTATTTATCCAATGATGATCTTAAGGCAGGATATTTGTTCACTTTCGTCCTCAAGAGGTGGCTTTGGGCTTGGAGTCTTGGAGGTCTCAGGTTCGAAATCCACAAATGAGCTTAATTATTAAATCCCTTGTTATCTTCCAGGTCTGAGCTTTGAGATGGCTGCAGGTACCTTGGGTACGTAGTGTAGTAAATCTCCAATTCTCGGTCGTAAAAAAAGAGAGTATATTTCTGTCAGCCATTGGCTTAGATCATTACTAAGATCTATCAAACTGATGAAGCCCCTTTTCTCATATGGATCTAAACCATTGTCGAAATGCTCCAAGAGCAGAAGGAACCCTTACTAAGTTTCAACCTCTTGTTGCAGCATGAGTGGGTTTGACTAGAAGTCACTGGATTTAATAGTGGATTTGTTATTTAGGGTACACCAAATCCTTTTAGATGGTTGACTTTTAAAACAATAGTTTTTTCTTGAAATACTGACCCTCCATGGATTTGGTGGGCGATGGATTAGGTACAAAACTTTGCATTAGTTGACCTAAAATATAAACATGTTGAATGAGCTATATGTATCTGAGAATGCAGCTAAAATGGCTACTACATATTAAACTTTCTTTAAAGAACTGGGTCTTTCAATGCATGATGAAGAATAGAATTATATTCTGCTCTGCAATCAGCTTGGCCCTCTTAGCTGTTATTCTCTTGGCCTTGCTTTCGCCAGTATCCCACCGAAAGCAGTCCAACCAAGCGAAAAAACCGCCGTGGGCGGACCTGTCCCTCTACATTCAACAGCCACATTCTAAAGCAAATGCCAGATCCAACAATTTGCAGCCTGTACAACCAGATTCTGGAGTTTTTGTCTTTCGACGAGCGCTCACGGAGGGGCCCGAGAACACGTCTCAGATCGTCGGAAAGGCTCAAGGTTTCATCATTCCTAACGAGCAGTTCGCTCGTTCGTCGTTCAATATCATCTATCTCAGTTTCGACACGCCAGAGTATTCGGGCAGCTTGAGTGTCCATGCCAAACATATTGGACATGAGAAAAAAGAAGAAATGGCAGTGGTTGGGGGGACAGGTTCTTTTGCTTTTGCTCAAGGGATAGCTGTTTTTTTACAGACAGAGAAGCAAGCATCTGTTGCTGATACATCTTATCATTTAAAGCTTCAACTTCAATTCCCCAAATGATAATTATAATGCAAAGTAGTCCCACATGCTTCTTTGTTTGATTATATTTAATAAAGCACAATTTTGTGTGCAACTGAGGAAGCATCCTCCTCATTCCAGTTGTATAAATTATTTGAGTCAAGTTATGAATTGGTGTACAAATAAGGAGTACTATGGAACTTGAGATGACATTGATCTTCCAACTTTTTCTTGTTACAATCT

mRNA sequence

CAGCGAATGGTGGTTCAGCTCCGTCCGCTCTTGGGTATCCGCCGTTGTCTGGGGATGTTTGGATGCGGATTATATGAAACTTGGTACACCCTTTTACCGTTTCTATCATTTGAATTTATTTGATTCATATTTAAGTTTTTTTTTTTTTTAAATTTTATTTATTTTTAATGTGGAATCAAATTGGGAAAGTTAAGTTTACCTTTGAAGTTAGGTCCCATCCGTTGTTGCTTTTAGCTGGTGCAAATGTACAGAATCCTTCAAGAACTATAGTTTCACTAATCTTGTAGCTGTTTGGAAGAAATTTTTGCCCCCATTTAACTTGATGATCTATGTTTGTTGAGTTGCCTTGAGACTTGAAATATGATGTATTGATGTTAATAAGCCATCAACAACGAGGGGCTGCCAAATTTATTATTGTTCAACTTTATCCACTAGTTTTACACTCATTGGAGCATTGTTCATTTCATACTGATGAACTGACCATACGATATGTGTTTTTTTTGTAAAATTAAGAAACAGAAAAGGAAACAAACAACAAGAAATCAAAAAGTTGTTATCAAACAAGTTTTGTTCCTGTTTTTTAATCTTTGTAAGAAACAATAATATTGAATCATGTAAAACTTTGTGGTCATCTCTTCCAATTGTTCATATGATATCTACTTGGAATGCTAGTTCATGCAATTATGTAGTTCTAGCACCACAACTGGATGTTGATGGAAGTTTCCTGTACCTCACTATAACTTACTTCGTGGATTGCTCAATTCATGGAGTATTTTGGATCCAATTGTTCCTATGCAAATGGAGACACAAGGGCTGGTAAATTATCTCTTCCCCATAGATTTCGAACTTGATGATAACAAAAATGTTTTGAATATGAGATTTTCATGTGGGTTATGCATCAAGCAAGTGGCTTAATCTGCTTTGTGGGAGAAGGGACTTTTGTTGCGGCATGCGAGAGAAACAATAGAATCTTTTGAGGGTTGGAGAGATTTCCAGACGATATTAGATTCTATGTTTCTCTATGAGGTTCGATGATAATACTTTTTTTATAATTACATTTTAGGTCTTGTTTTGTTGGATTAGAAGCCCTTTTCATAGGTCTCTCTTTTTGTTTGCCTTATATTATTTCTTTTAATCTTAATGAATGCTCGGTTGTTAATTAAAAGAAAAATGATAATTTTTTTTTTCAGTTAGATAAACTCCACAGGACATTGTAGCTGTGTGTCAATGTGATAAAGAATCGATAAAACAATAGAGTTACAATTCTGACAGTCTGTGCATAATTTGGATTGATATATGTGAAAACTTTGTTTTTGTAGTCTTTTCATTCTGAATTTAATAGACAGGTACCCAGTTTTGGGATGAGCATTTTAATGCTTCAAAAAGGTTAGATCTACAAAATATGGAAAGATATGAGGCAATTCTTAGCAATGCTTTCTGATTTTATCGAATATAGAGTGGCTCAATTTTATGATTGGAACATCAATCATGGGTTGACCCAACAGTGAAAGAGGGTCAGGAAGATGTAAGAGTGTCATGAATTCAATCTATATTGATTACTTACCTAGTAATTTTCTATGTGTTTCTTTCGCATCCAATTTTAGAATAAATGAGTGATATTTTACTTTTTTACGAGCCTCTGATTTGCCTGGCTGTGTGTTTCTGAAATGACATCTCACTTGGACTCTTGCTGTGTACATGTGTGCCTTGTTTGTTTCAGAATGGACATTTCTTTGCCTGTGAACACAAGGTCATCCACTCAATTATTTATCCAATGATGATCTTAAGGCAGGATATTTGTTCACTTTCGTCCTCAAGAGGTGGCTTTGGGCTTGGAGTCTTGGAGGTCTCAGGTACCTTGGGTACGTAGTGTAGTAAATCTCCAATTCTCGGTCGTAAAAAAAGAGAGTATATTTCTGTCAGCCATTGGCTTAGATCATTACTAAGATCTATCAAACTGATGAAGCCCCTTTTCTCATATGGATCTAAACCATTGTCGAAATGCTCCAAGAGCAGAAGGAACCCTTACTAAGTTTCAACCTCTTGTTGCAGCATGAGTGGGTTTGACTAGAAGTCACTGGATTTAATAGTGGATTTGTTATTTAGGGTACACCAAATCCTTTTAGATGGTTGACTTTTAAAACAATAGTTTTTTCTTGAAATACTGACCCTCCATGGATTTGGTGGGCGATGGATTAGGTACAAAACTTTGCATTAGTTGACCTAAAATATAAACATGTTGAATGAGCTATATGTATCTGAGAATGCAGCTAAAATGGCTACTACATATTAAACTTTCTTTAAAGAACTGGGTCTTTCAATGCATGATGAAGAATAGAATTATATTCTGCTCTGCAATCAGCTTGGCCCTCTTAGCTGTTATTCTCTTGGCCTTGCTTTCGCCAGTATCCCACCGAAAGCAGTCCAACCAAGCGAAAAAACCGCCGTGGGCGGACCTGTCCCTCTACATTCAACAGCCACATTCTAAAGCAAATGCCAGATCCAACAATTTGCAGCCTGTACAACCAGATTCTGGAGTTTTTGTCTTTCGACGAGCGCTCACGGAGGGGCCCGAGAACACGTCTCAGATCGTCGGAAAGGCTCAAGGTTTCATCATTCCTAACGAGCAGTTCGCTCGTTCGTCGTTCAATATCATCTATCTCAGTTTCGACACGCCAGAGTATTCGGGCAGCTTGAGTGTCCATGCCAAACATATTGGACATGAGAAAAAAGAAGAAATGGCAGTGGTTGGGGGGACAGGTTCTTTTGCTTTTGCTCAAGGGATAGCTGTTTTTTTACAGACAGAGAAGCAAGCATCTGTTGCTGATACATCTTATCATTTAAAGCTTCAACTTCAATTCCCCAAATGATAATTATAATGCAAAGTAGTCCCACATGCTTCTTTGTTTGATTATATTTAATAAAGCACAATTTTGTGTGCAACTGAGGAAGCATCCTCCTCATTCCAGTTGTATAAATTATTTGAGTCAAGTTATGAATTGGTGTACAAATAAGGAGTACTATGGAACTTGAGATGACATTGATCTTCCAACTTTTTCTTGTTACAATCT

Coding sequence (CDS)

ATGAGCTATATGTATCTGAGAATGCAGCTAAAATGGCTACTACATATTAAACTTTCTTTAAAGAACTGGGTCTTTCAATGCATGATGAAGAATAGAATTATATTCTGCTCTGCAATCAGCTTGGCCCTCTTAGCTGTTATTCTCTTGGCCTTGCTTTCGCCAGTATCCCACCGAAAGCAGTCCAACCAAGCGAAAAAACCGCCGTGGGCGGACCTGTCCCTCTACATTCAACAGCCACATTCTAAAGCAAATGCCAGATCCAACAATTTGCAGCCTGTACAACCAGATTCTGGAGTTTTTGTCTTTCGACGAGCGCTCACGGAGGGGCCCGAGAACACGTCTCAGATCGTCGGAAAGGCTCAAGGTTTCATCATTCCTAACGAGCAGTTCGCTCGTTCGTCGTTCAATATCATCTATCTCAGTTTCGACACGCCAGAGTATTCGGGCAGCTTGAGTGTCCATGCCAAACATATTGGACATGAGAAAAAAGAAGAAATGGCAGTGGTTGGGGGGACAGGTTCTTTTGCTTTTGCTCAAGGGATAGCTGTTTTTTTACAGACAGAGAAGCAAGCATCTGTTGCTGATACATCTTATCATTTAAAGCTTCAACTTCAATTCCCCAAATGA

Protein sequence

MSYMYLRMQLKWLLHIKLSLKNWVFQCMMKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSNNLQPVQPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEYSGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFPK

Homology

[Close]

BLAST of Sed0001684.2 vs. NCBI nr
Match: XP_038888051.1 (dirigent protein 8 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85
Identity = 167/206 (81.07%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 8   MQLKWLLHIK----LSLKNWVFQCMMKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQ 67
           M + WLLH K    L LK  VFQCMMKNRIIFC+AI LA LAVILLALLSPVSHRKQ+  
Sbjct: 1   MLINWLLHYKYINVLFLKKLVFQCMMKNRIIFCAAICLAFLAVILLALLSPVSHRKQAKH 60

Query: 68  AKKPPWADLSLYIQQPHSKANARSNNLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQG 127
            +KPPWADLSLYIQ+PHSK NARSN ++PV +PDSG+FVFRR LT+GPENTSQIVG AQG
Sbjct: 61  DRKPPWADLSLYIQRPHSKENARSNKMKPVTEPDSGIFVFRRTLTKGPENTSQIVGNAQG 120

Query: 128 FIIPNEQFARSSFNIIYLSFDTPEYSGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIA 187
           FIIPNEQFARSSFNIIYLSFDTPEYSGSL VHAK IGHE +EEM VVGGTGSFAFAQGIA
Sbjct: 121 FIIPNEQFARSSFNIIYLSFDTPEYSGSLGVHAKRIGHENREEMTVVGGTGSFAFAQGIA 180

Query: 188 VFLQTEKQASVADTSYHLKLQLQFPK 209
           +FLQTEKQ S+ DTSYHLKLQLQFPK
Sbjct: 181 IFLQTEKQTSITDTSYHLKLQLQFPK 206

[Close]

BLAST of Sed0001684.2 vs. NCBI nr
Match: XP_022952599.1 (uncharacterized protein LOC111455239 [Cucurbita moschata])

HSP 1 Score: 308.1 bits (788), Expect = 5.6e-80
Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA+LAVILLALLSPVSHRKQ+    KPPWADLSLYIQQPHSKAN+RSN
Sbjct: 1   MKNRIIFCAAICLAILAVILLALLSPVSHRKQAKHDSKPPWADLSLYIQQPHSKANSRSN 60

Query: 89  NLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+Q V  PDSG+FVFRR LT+G ENTSQIVG AQGFIIPNEQF RSSFNIIYLSFDTPEY
Sbjct: 61  NMQLVPSPDSGIFVFRRMLTKGLENTSQIVGNAQGFIIPNEQFGRSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSLSVHAKHIGHE +EEM VVGGTGSFAFAQGIA+FLQTE+QASV DTSYHLKLQLQFP
Sbjct: 121 SGSLSVHAKHIGHENREEMTVVGGTGSFAFAQGIAIFLQTERQASVTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. NCBI nr
Match: XP_022969428.1 (dirigent protein 8 [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA+LAVILLALLSPVSHRKQ+    KPPWADLSLYIQQPHSKAN+RS+
Sbjct: 1   MKNRIIFCAAICLAILAVILLALLSPVSHRKQAKHDGKPPWADLSLYIQQPHSKANSRSS 60

Query: 89  NLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+Q V  PDSG+FVFRR LT+G ENTSQIVG AQGFIIPNEQFARSSFNIIYLSFDTPEY
Sbjct: 61  NMQLVPSPDSGIFVFRRMLTKGLENTSQIVGNAQGFIIPNEQFARSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSLSVHAKHIGHE +EEM VVGGTGSFAFAQGIA+FLQTE+QASV DTSYHLKLQLQFP
Sbjct: 121 SGSLSVHAKHIGHENREEMTVVGGTGSFAFAQGIAIFLQTERQASVTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. NCBI nr
Match: XP_023511732.1 (uncharacterized protein LOC111776503 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA+LAVILLALLSPVSHRKQ+   +KPPWADLSLYIQQPHSKAN+RSN
Sbjct: 1   MKNRIIFCAAICLAILAVILLALLSPVSHRKQAKHDRKPPWADLSLYIQQPHSKANSRSN 60

Query: 89  NLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+Q V  PDSG+FVFRR LT+G ENTSQIVG AQGFIIPNEQFARSSFNIIYLSFDT EY
Sbjct: 61  NMQLVPSPDSGIFVFRRMLTKGLENTSQIVGNAQGFIIPNEQFARSSFNIIYLSFDTLEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSLSVHAKHIGHE +EEM VVGGTGSFAFAQGIA+FLQTE+QASV DTSYHLKLQLQFP
Sbjct: 121 SGSLSVHAKHIGHENREEMTVVGGTGSFAFAQGIAIFLQTERQASVTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. NCBI nr
Match: KAG6572477.1 (Dirigent protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012071.1 Dirigent protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-79
Identity = 155/181 (85.64%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA+LAVILLALLSPVSHRKQ+   +KPPWADLSLYIQQP+SKAN+RSN
Sbjct: 1   MKNRIIFCAAICLAILAVILLALLSPVSHRKQAKHDRKPPWADLSLYIQQPNSKANSRSN 60

Query: 89  NLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+Q V  PDSG+FVFRR LT+G ENTSQIVG AQGFIIPNEQFARSSFNIIYLSFDTPEY
Sbjct: 61  NMQLVPSPDSGIFVFRRMLTKGLENTSQIVGNAQGFIIPNEQFARSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSLSVHAKHIGHE +EEM VVGGTGSFAFAQGIA+FLQTE+QASV DT YHLKLQLQFP
Sbjct: 121 SGSLSVHAKHIGHENREEMTVVGGTGSFAFAQGIAIFLQTERQASVTDTCYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. ExPASy Swiss-Prot
Match: A0A1V1FH01 (Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 76  IQQPHSKANARSNNLQPVQPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSF 135
           + +P+ KA    N+L    P   V      LT GPE+ S++VGKAQG      Q      
Sbjct: 62  VAEPNGKA---KNSL----PFGTVVAMDDPLTVGPESDSKLVGKAQGIYTSISQEEMGLM 121

Query: 136 NIIYLSFDTPEYSGS-LSVHAKH-IGHEKKEEMAVVGGTGSFAFAQGIA 183
            ++ ++F   E++GS LS+ A++ I  E   EMA+VGGTG+F FA+G A
Sbjct: 122 MVMTMAFSDGEFNGSTLSILARNMIMSEPVREMAIVGGTGAFRFARGYA 163

[Close]

BLAST of Sed0001684.2 vs. ExPASy Swiss-Prot
Match: I1JNN8 (Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07
Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 74  LYIQQPHSKANARSNNLQPVQPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARS 133
           ++I +P+ KA       +   P   V      LT GPE  S++VGKAQG      Q    
Sbjct: 58  VFIAEPNGKA-------KDALPFGTVVAMDDPLTVGPEQDSKLVGKAQGIYTSISQEEMG 117

Query: 134 SFNIIYLSFDTPEYSGS-LSVHAKH-IGHEKKEEMAVVGGTGSFAFAQGIA 183
              ++ ++F   +++GS +SV  ++ I  E   EMA+VGGTG+F FA+G A
Sbjct: 118 LMMVMTMAFTDGDFNGSTISVLGRNMIMSEPVREMAIVGGTGAFRFARGYA 161

[Close]

BLAST of Sed0001684.2 vs. ExPASy Swiss-Prot
Match: Q9SKQ2 (Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.3e-06
Identity = 29/100 (29.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 84  NARSNNLQPVQPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFD 143
           + R +N     P   +F     LT GP+  S+ +G A+G  + + +   +    +   F 
Sbjct: 62  HTRGDNDSSPSPFGSLFALDDPLTVGPDPKSEKIGNARGMYVSSGKHVPTLTMYVDFGFT 121

Query: 144 TPEYSG-SLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIA 183
           + +++G S++V +++   EK+ E+AVVGG G F  A+G+A
Sbjct: 122 SGKFNGSSIAVFSRNTITEKEREVAVVGGRGRFRMARGVA 161

[Close]

BLAST of Sed0001684.2 vs. ExPASy Swiss-Prot
Match: Q9FIG7 (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.3e-06
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 106 LTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEYSGS-LSVHAKHIGHEKKE 165
           LTEGP+ +S+ VG+AQG          S   +  L+F   E++GS ++++ ++    K  
Sbjct: 86  LTEGPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVR 145

Query: 166 EMAVVGGTGSFAFAQGIA 183
           EM ++GGTG+F FA+G A
Sbjct: 146 EMPIIGGTGAFRFARGYA 163

[Close]

BLAST of Sed0001684.2 vs. ExPASy Swiss-Prot
Match: Q9SUQ8 (Dirigent protein 6 OS=Arabidopsis thaliana OX=3702 GN=DIR6 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-05
Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 42  ALLAVILLALL---SPVSHRKQSNQAKKPPWADLSLY----IQQPHSKANARSNNLQPVQ 101
           AL +  LL LL   + +S RK  +Q  K P    S Y    +    + ANA S  +    
Sbjct: 12  ALFSFFLLVLLFSDTVLSFRKTIDQ--KKPCKHFSFYFHDILYDGDNVANATSAAIVS-P 71

Query: 102 PDSGVFVFRR-ALTEGP-----ENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEYS 161
           P  G F F +  + +GP        S+ V +AQGF   + +   +S+    L F++ E+ 
Sbjct: 72  PGLGNFKFGKFVIFDGPITMDKNYLSKPVARAQGFYFYDMKMDFNSWFSYTLVFNSTEHK 131

Query: 162 GSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFL 186
           G+L++    +  E   +++VVGGTG F  A+GIA F+
Sbjct: 132 GTLNIMGADLMMEPTRDLSVVGGTGDFFMARGIATFV 165

[Close]

BLAST of Sed0001684.2 vs. ExPASy TrEMBL
Match: A0A6J1GM61 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111455239 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80
Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA+LAVILLALLSPVSHRKQ+    KPPWADLSLYIQQPHSKAN+RSN
Sbjct: 1   MKNRIIFCAAICLAILAVILLALLSPVSHRKQAKHDSKPPWADLSLYIQQPHSKANSRSN 60

Query: 89  NLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+Q V  PDSG+FVFRR LT+G ENTSQIVG AQGFIIPNEQF RSSFNIIYLSFDTPEY
Sbjct: 61  NMQLVPSPDSGIFVFRRMLTKGLENTSQIVGNAQGFIIPNEQFGRSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSLSVHAKHIGHE +EEM VVGGTGSFAFAQGIA+FLQTE+QASV DTSYHLKLQLQFP
Sbjct: 121 SGSLSVHAKHIGHENREEMTVVGGTGSFAFAQGIAIFLQTERQASVTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. ExPASy TrEMBL
Match: A0A6J1I0Y2 (Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111468438 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.0e-80
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA+LAVILLALLSPVSHRKQ+    KPPWADLSLYIQQPHSKAN+RS+
Sbjct: 1   MKNRIIFCAAICLAILAVILLALLSPVSHRKQAKHDGKPPWADLSLYIQQPHSKANSRSS 60

Query: 89  NLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+Q V  PDSG+FVFRR LT+G ENTSQIVG AQGFIIPNEQFARSSFNIIYLSFDTPEY
Sbjct: 61  NMQLVPSPDSGIFVFRRMLTKGLENTSQIVGNAQGFIIPNEQFARSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSLSVHAKHIGHE +EEM VVGGTGSFAFAQGIA+FLQTE+QASV DTSYHLKLQLQFP
Sbjct: 121 SGSLSVHAKHIGHENREEMTVVGGTGSFAFAQGIAIFLQTERQASVTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. ExPASy TrEMBL
Match: A0A5A7U5G8 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00790 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.9e-75
Identity = 146/181 (80.66%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA LAVILLA+LSPVSH+KQ+   +KP W DLSLYIQ+P SKANAR N
Sbjct: 1   MKNRIIFCAAICLAFLAVILLAVLSPVSHKKQAKHDRKPQWTDLSLYIQRPRSKANARPN 60

Query: 89  NLQPVQ-PDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+QPV  PDSGVF FRR LT+GPENTSQIVG AQG IIP+EQFARSSFNIIYLSFDTPEY
Sbjct: 61  NMQPVTVPDSGVFFFRRMLTKGPENTSQIVGNAQGIIIPSEQFARSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSL VHAKHIGHE +EEM VVGGTGSFAFAQG+A+FLQTE+Q    DTSYHLKLQLQFP
Sbjct: 121 SGSLGVHAKHIGHENREEMTVVGGTGSFAFAQGVAIFLQTERQTLNTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. ExPASy TrEMBL
Match: A0A1S3BGM4 (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103489634 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.9e-75
Identity = 146/181 (80.66%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 29  MKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARSN 88
           MKNRIIFC+AI LA LAVILLA+LSPVSH+KQ+   +KP W DLSLYIQ+P SKANAR N
Sbjct: 1   MKNRIIFCAAICLAFLAVILLAVLSPVSHKKQAKHDRKPQWTDLSLYIQRPRSKANARPN 60

Query: 89  NLQPVQ-PDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEY 148
           N+QPV  PDSGVF FRR LT+GPENTSQIVG AQG IIP+EQFARSSFNIIYLSFDTPEY
Sbjct: 61  NMQPVTVPDSGVFFFRRMLTKGPENTSQIVGNAQGIIIPSEQFARSSFNIIYLSFDTPEY 120

Query: 149 SGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQFP 208
           SGSL VHAKHIGHE +EEM VVGGTGSFAFAQG+A+FLQTE+Q    DTSYHLKLQLQFP
Sbjct: 121 SGSLGVHAKHIGHENREEMTVVGGTGSFAFAQGVAIFLQTERQTLNTDTSYHLKLQLQFP 180

[Close]

BLAST of Sed0001684.2 vs. ExPASy TrEMBL
Match: A0A6J1D409 (Dirigent protein OS=Momordica charantia OX=3673 GN=LOC111016784 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.9e-73
Identity = 145/182 (79.67%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 28  MMKNRIIFCSAISLALLAVILLALLSPVSHRKQSNQAKKPPWADLSLYIQQPHSKANARS 87
           MMK RIIFC+A+ LA L VILLALLSPV ++KQS   +KP WADLSLYIQQPHS  NA+S
Sbjct: 1   MMKTRIIFCAAVCLAFLVVILLALLSPVPNKKQSKHGRKPSWADLSLYIQQPHSTGNAKS 60

Query: 88  NNLQPV-QPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPE 147
           NN+QPV + DSGVFVF R LTEGPENTS+IVG A+GFIIPNEQFA SSFN+IYLSFDTPE
Sbjct: 61  NNMQPVPRSDSGVFVFLRTLTEGPENTSRIVGNARGFIIPNEQFAHSSFNVIYLSFDTPE 120

Query: 148 YSGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTSYHLKLQLQF 207
           YSGSLSVHAKHIGHE + E+AVVGGTGSFAFAQGIA+FLQT+ QASV DT+YHLKLQLQF
Sbjct: 121 YSGSLSVHAKHIGHENR-ELAVVGGTGSFAFAQGIAIFLQTDGQASVTDTTYHLKLQLQF 180

Query: 208 PK 209
           PK
Sbjct: 181 PK 181

[Close]

BLAST of Sed0001684.2 vs. TAIR 10
Match: AT5G42655.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.5e-33
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0


Query: 78  QPHSKANARSNNLQPVQPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNI 137
           QPH +   +           G  +FRR LTEGPEN S+IVGKA+GFIIP+E FA S FN+
Sbjct: 3   QPHGRGGGK-----------GALIFRRTLTEGPENNSRIVGKAEGFIIPHEDFANSDFNV 62

Query: 138 IYLSFDTPEYSGSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFLQTEKQASVADTS 197
           IYL+ +TPEY+GS+S+ ++ + H+ KE M VVGGTG+FAFA+GIA+F + +     A T+
Sbjct: 63  IYLTLETPEYTGSVSIRSRDMTHKLKEVMEVVGGTGAFAFARGIAMFNEIDDHEEEAVTT 121

Query: 198 YHLKLQLQFP 208
           Y +KL L+FP
Sbjct: 123 YRVKLLLRFP 121

[Close]

BLAST of Sed0001684.2 vs. TAIR 10
Match: AT2G21110.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 29/100 (29.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 84  NARSNNLQPVQPDSGVFVFRRALTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFD 143
           + R +N     P   +F     LT GP+  S+ +G A+G  + + +   +    +   F 
Sbjct: 62  HTRGDNDSSPSPFGSLFALDDPLTVGPDPKSEKIGNARGMYVSSGKHVPTLTMYVDFGFT 121

Query: 144 TPEYSG-SLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIA 183
           + +++G S++V +++   EK+ E+AVVGG G F  A+G+A
Sbjct: 122 SGKFNGSSIAVFSRNTITEKEREVAVVGGRGRFRMARGVA 161

[Close]

BLAST of Sed0001684.2 vs. TAIR 10
Match: AT5G42500.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.2e-07
Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 106 LTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEYSGS-LSVHAKHIGHEKKE 165
           LTEGP+ +S+ VG+AQG          S   +  L+F   E++GS ++++ ++    K  
Sbjct: 86  LTEGPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVR 145

Query: 166 EMAVVGGTGSFAFAQGIA 183
           EM ++GGTG+F FA+G A
Sbjct: 146 EMPIIGGTGAFRFARGYA 163

[Close]

BLAST of Sed0001684.2 vs. TAIR 10
Match: AT3G58090.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 106 LTEGPENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEYSGS-LSVHAKHIGHEKKE 165
           LT GPE TS+ VG+AQG     +Q            F   E+SGS +S++ ++    K  
Sbjct: 170 LTVGPEITSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGRNPIFSKVR 229

Query: 166 EMAVVGGTGSFAFAQGIA 183
           EM ++GGTG+F F +G A
Sbjct: 230 EMPIIGGTGAFRFGRGYA 247

[Close]

BLAST of Sed0001684.2 vs. TAIR 10
Match: AT4G23690.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 49/157 (31.21%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 42  ALLAVILLALL---SPVSHRKQSNQAKKPPWADLSLY----IQQPHSKANARSNNLQPVQ 101
           AL +  LL LL   + +S RK  +Q  K P    S Y    +    + ANA S  +    
Sbjct: 12  ALFSFFLLVLLFSDTVLSFRKTIDQ--KKPCKHFSFYFHDILYDGDNVANATSAAIVS-P 71

Query: 102 PDSGVFVFRR-ALTEGP-----ENTSQIVGKAQGFIIPNEQFARSSFNIIYLSFDTPEYS 161
           P  G F F +  + +GP        S+ V +AQGF   + +   +S+    L F++ E+ 
Sbjct: 72  PGLGNFKFGKFVIFDGPITMDKNYLSKPVARAQGFYFYDMKMDFNSWFSYTLVFNSTEHK 131

Query: 162 GSLSVHAKHIGHEKKEEMAVVGGTGSFAFAQGIAVFL 186
           G+L++    +  E   +++VVGGTG F  A+GIA F+
Sbjct: 132 GTLNIMGADLMMEPTRDLSVVGGTGDFFMARGIATFV 165

The following BLAST results are available for this feature:

BLAST of Sed0001684.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888051.1	1.5e-85	81.07	dirigent protein 8 [Benincasa hispida]	[more]
XP_022952599.1	5.6e-80	86.19	uncharacterized protein LOC111455239 [Cucurbita moschata]	[more]
XP_022969428.1	1.2e-79	86.19	dirigent protein 8 [Cucurbita maxima]	[more]
XP_023511732.1	1.6e-79	86.19	uncharacterized protein LOC111776503 [Cucurbita pepo subsp. pepo]	[more]
KAG6572477.1	2.8e-79	85.64	Dirigent protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012071....	[more]

BLAST of Sed0001684.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A1V1FH01	2.7e-08	38.53	Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1	[more]
I1JNN8	1.7e-07	35.14	Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1	[more]
Q9SKQ2	4.3e-06	29.00	Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1	[more]
Q9FIG7	7.3e-06	37.18	Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1	[more]
Q9SUQ8	2.1e-05	31.21	Dirigent protein 6 OS=Arabidopsis thaliana OX=3702 GN=DIR6 PE=1 SV=1	[more]

BLAST of Sed0001684.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GM61	2.7e-80	86.19	Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111455239 PE=3 SV=1	[more]
A0A6J1I0Y2	6.0e-80	86.19	Dirigent protein OS=Cucurbita maxima OX=3661 GN=LOC111468438 PE=3 SV=1	[more]
A0A5A7U5G8	5.9e-75	80.66	Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G007...	[more]
A0A1S3BGM4	5.9e-75	80.66	Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103489634 PE=3 SV=1	[more]
A0A6J1D409	1.9e-73	79.67	Dirigent protein OS=Momordica charantia OX=3673 GN=LOC111016784 PE=3 SV=1	[more]

BLAST of Sed0001684.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42655.1	5.5e-33	51.54	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT2G21110.1	3.0e-07	29.00	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT5G42500.1	5.2e-07	37.18	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT3G58090.1	1.2e-06	38.46	Disease resistance-responsive (dirigent-like protein) family protein	[more]
AT4G23690.1	1.5e-06	31.21	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004265	Dirigent protein	PFAM	PF03018	Dirigent	coord: 96..195 e-value: 9.1E-21 score: 74.2
IPR044859	Allene oxide cyclase/Dirigent protein	GENE3D	2.40.480.10		coord: 70..208 e-value: 7.8E-9 score: 37.3
None	No IPR available	PANTHER	PTHR21495:SF171	DIRIGENT PROTEIN	coord: 31..207
None	No IPR available	PANTHER	PTHR21495	NUCLEOPORIN-RELATED	coord: 31..207

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0001684	Sed0001684	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001684.2-three_prime_utr	Sed0001684.2-three_prime_utr-LG04:44627414..44627614	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001684.2-exon	Sed0001684.2-exon-LG04:44627414..44628631	exon
Sed0001684.2-exon	Sed0001684.2-exon-LG04:44628707..44630559	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001684.2-cds	Sed0001684.2-cds-LG04:44627615..44628241	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0001684.2-five_prime_utr	Sed0001684.2-five_prime_utr-LG04:44628242..44628631	five_prime_UTR
Sed0001684.2-five_prime_utr	Sed0001684.2-five_prime_utr-LG04:44628707..44630559	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0001684.2	Sed0001684.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
cellular_component	GO:0016021	integral component of membrane