Sed0001003.1 (mRNA) Chayote v1

Overview
NameSed0001003.1
TypemRNA
OrganismSechium edule (Chayote v1)
DescriptionTetratricopeptide repeat (TPR)-containing protein isoform 1
LocationLG03: 34801339 .. 34803071 (-)
Sequence length851
RNA-Seq ExpressionSed0001003.1
SyntenySed0001003.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTTTACAACTTCCCAAACAATGTCATCTCATATGGAACACCAAGATGATGAACGTCAAACCTTAGGCCACCATATTGCTCGCAAACTCAATTTCAATGCCCCTCTTTTGACCACACGCCGCCCTGCTGCCAATGTCGCTCGTTTGAGCATTTCGGCCTCCACTCGGAGGTCGTCATCAACATATGATAGAGTTCCTTTCTGTTGGGAACAAGCTCCGGGGAAGCCAAAAGAGTATGTTGAGAGATGTGATGATGATGATGGTGCCGCCGCCACCCCTCGTCCTACACTTCCACCTGGATGGTGGCGGCCGCCCATTCAAACAAGTAAGGGCCTTGGCTTGATGAACTTTGTTAGTGTGTTTGTGCTTTTGAGTGTTAGATGATGTTAATTCAATTATTTTGATACAAATTTAGTTCTTATAGTTTAAATATGGTTTAATTTTGTTCATGGTAATTTAAAAGGCTTTAATAATAATATGATTTGAGTTTTATTGTTATTTTTTATAGATTAATATTGAGAGAAGAGTGATTAGAACCTATAATCTCATGATTATTAGATTGTACAAGATGTGGTGTGGTTAGAACGCTGTTCTATTTGGTCAATTTTATATAGTCTCAAAGTTTCAATTTAGTTTTTTATGGCTAAGTAAATGAGTTAAATGTTATTTGTTTGTCCAATATATTTTTGTTAATTACATTATAATTTGTCAACAAGATTATAGTTTACCGTACTAGAAGTATGAATTTATGAATCGTGATTCCAAATACCTCATCTATAAATGTGTTACATATACTTTTAAAAAACTAAACTAGAGTTTAAGGTATAATTAAAAAATAAATAAAAGAACCGAGGGTCAGTGGCGCAGTTGGTTATCTTGTCTGATGTTAATTTATTTCAACTCCACGGTCACGAGTTCGAGTAGTTGGTATTAATTTTTTAATTTCATAGAAGAAAATTAATTTTTTAAAAAACTAAATTTGTATTTGGCTTTCATATAATTTGAGAGTAGTTGGTAGATTAATTTTTTAAGTTCATAGAAGAAAATTAAAAGATAATTGGTAAGATTTAACCAAACTAACTAAGAAGAACAAATTTAAAAATTAAAACTTTGAAAATCAGAAGCCATTGTGAAAATTCTTACAACTGAATTTTACTTCAAACGTTATTTGTATGCTATCTCAATTTTTTATCTGCTAAATGTACAGGAAGAAACTCTAGACATGATCATTGTAACGATCATAATTTCAACGACAATGCAGATGATTGCCATGACAATGACCACAATTCAAGTGGCAGTGGCTATGTCCTGTCAGAAACTATTGATGTCTTCTCGTTATCGGAGGCCATCGACATCGTCGAGAAGGCAGAGAAAGCTCACAAATTTTCTGACGAGTTGAAGTTGAAACAGGTAAAATTATACGATGACGACGAAGAAGAAAGAAGCGACCATAGTTATAATTGCTCGTCAAATTTCATGATCGAGCGGTTTCTACCTGATGCAACAGCATTGGCTGCTTCGTCTGTCCTGAACAGCGACGCCTTCTCGCCAAAGAGAGTGGCACGACAGTCATTTTCTCCACCGAAGGGCTGTGGGCTGGACATGTTGATTCCGTGGCGGACAAAGCACCACCACCAGCTGTGTGGAGTGAAGAGTCCGGTCAAGGACATAGGCCGGAGCTTGGGATCAAAAACTTCTGCAAAACAAAAGAAAGAGCATAAGATATTTTGA

mRNA sequence

CTTTTTTTACAACTTCCCAAACAATGTCATCTCATATGGAACACCAAGATGATGAACGTCAAACCTTAGGCCACCATATTGCTCGCAAACTCAATTTCAATGCCCCTCTTTTGACCACACGCCGCCCTGCTGCCAATGTCGCTCGTTTGAGCATTTCGGCCTCCACTCGGAGGTCGTCATCAACATATGATAGAGTTCCTTTCTGTTGGGAACAAGCTCCGGGGAAGCCAAAAGAGTATGTTGAGAGATGTGATGATGATGATGGTGCCGCCGCCACCCCTCGTCCTACACTTCCACCTGGATGGTGGCGGCCGCCCATTCAAACAAGAAGAAACTCTAGACATGATCATTGTAACGATCATAATTTCAACGACAATGCAGATGATTGCCATGACAATGACCACAATTCAAGTGGCAGTGGCTATGTCCTGTCAGAAACTATTGATGTCTTCTCGTTATCGGAGGCCATCGACATCGTCGAGAAGGCAGAGAAAGCTCACAAATTTTCTGACGAGTTGAAGTTGAAACAGGTAAAATTATACGATGACGACGAAGAAGAAAGAAGCGACCATAGTTATAATTGCTCGTCAAATTTCATGATCGAGCGGTTTCTACCTGATGCAACAGCATTGGCTGCTTCGTCTGTCCTGAACAGCGACGCCTTCTCGCCAAAGAGAGTGGCACGACAGTCATTTTCTCCACCGAAGGGCTGTGGGCTGGACATGTTGATTCCGTGGCGGACAAAGCACCACCACCAGCTGTGTGGAGTGAAGAGTCCGGTCAAGGACATAGGCCGGAGCTTGGGATCAAAAACTTCTGCAAAACAAAAGAAAGAGCATAAGATATTTTGA

Coding sequence (CDS)

ATGTCATCTCATATGGAACACCAAGATGATGAACGTCAAACCTTAGGCCACCATATTGCTCGCAAACTCAATTTCAATGCCCCTCTTTTGACCACACGCCGCCCTGCTGCCAATGTCGCTCGTTTGAGCATTTCGGCCTCCACTCGGAGGTCGTCATCAACATATGATAGAGTTCCTTTCTGTTGGGAACAAGCTCCGGGGAAGCCAAAAGAGTATGTTGAGAGATGTGATGATGATGATGGTGCCGCCGCCACCCCTCGTCCTACACTTCCACCTGGATGGTGGCGGCCGCCCATTCAAACAAGAAGAAACTCTAGACATGATCATTGTAACGATCATAATTTCAACGACAATGCAGATGATTGCCATGACAATGACCACAATTCAAGTGGCAGTGGCTATGTCCTGTCAGAAACTATTGATGTCTTCTCGTTATCGGAGGCCATCGACATCGTCGAGAAGGCAGAGAAAGCTCACAAATTTTCTGACGAGTTGAAGTTGAAACAGGTAAAATTATACGATGACGACGAAGAAGAAAGAAGCGACCATAGTTATAATTGCTCGTCAAATTTCATGATCGAGCGGTTTCTACCTGATGCAACAGCATTGGCTGCTTCGTCTGTCCTGAACAGCGACGCCTTCTCGCCAAAGAGAGTGGCACGACAGTCATTTTCTCCACCGAAGGGCTGTGGGCTGGACATGTTGATTCCGTGGCGGACAAAGCACCACCACCAGCTGTGTGGAGTGAAGAGTCCGGTCAAGGACATAGGCCGGAGCTTGGGATCAAAAACTTCTGCAAAACAAAAGAAAGAGCATAAGATATTTTGA

Protein sequence

MSSHMEHQDDERQTLGHHIARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCWEQAPGKPKEYVERCDDDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDEEERSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDMLIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEHKIF
Homology
BLAST of Sed0001003.1 vs. NCBI nr
Match: XP_038883247.1 (uncharacterized protein LOC120074256 [Benincasa hispida])

HSP 1 Score: 401.0 bits (1029), Expect = 8.4e-108
Identity = 210/276 (76.09%), Postives = 231/276 (83.70%), Query Frame = 0

Query: 5   MEHQDDERQT-LGHHIARKLNFNAPLLTTRRPAANVA--RLSISASTRRSSS-TYDRVPF 64
           MEHQDDERQ    HHIARKLNFNAPLLTTRRP ANV   RLSIS + R SSS T DRVPF
Sbjct: 5   MEHQDDERQIHAHHHIARKLNFNAPLLTTRRPPANVGLDRLSISTAARISSSTTSDRVPF 64

Query: 65  CWEQAPGKPKEYVERCDDD--DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDN 124
           CWEQ PGKPKEYVERC     +    TPRPTLPPGWWRPPIQTRRNSRH HCNDH   DN
Sbjct: 65  CWEQVPGKPKEYVERCHGSAHESDVTTPRPTLPPGWWRPPIQTRRNSRHLHCNDHGCEDN 124

Query: 125 ADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDEE 184
            D  +DND NSSGSGYVLS+ +DV SLSEAIDIVEKAEKAHKFS+ELKLK++KLY+++EE
Sbjct: 125 VDGNNDNDDNSSGSGYVLSDAMDVLSLSEAIDIVEKAEKAHKFSNELKLKELKLYEEEEE 184

Query: 185 E--RSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDMLI 244
           E   ++ +YN SSNFMIERFLPDATALAASSVLN  AFSP+RV+++ FSPPKGCGLD+L 
Sbjct: 185 EERNNNSNYNHSSNFMIERFLPDATALAASSVLNRHAFSPQRVSKRPFSPPKGCGLDVLF 244

Query: 245 PWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 245 PWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 280

BLAST of Sed0001003.1 vs. NCBI nr
Match: XP_011654375.1 (uncharacterized protein LOC105435371 [Cucumis sativus] >KGN54398.1 hypothetical protein Csa_018072 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107
Identity = 212/278 (76.26%), Postives = 236/278 (84.89%), Query Frame = 0

Query: 5   MEHQDDERQT-LGHHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+RQ+ + HHIARKLNFNAPLLTTRRPAANV   RLSIS S R S S+T DRVPF
Sbjct: 1   MEHQDDDRQSYVHHHIARKLNFNAPLLTTRRPAANVDLDRLSISGSARISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCD--DDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFND 124
           CWEQAPGKPKEYVERC      G A TPRPTLPPGWWRPP+QTRRNSRH HCND H  +D
Sbjct: 61  CWEQAPGKPKEYVERCHAAAHGGDAITPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCDD 120

Query: 125 NADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDE 184
           N D   DND NSSGSGYVLS+ +DVFSLSEAIDIVEKAEKA KFSDEL LK++KLY+++E
Sbjct: 121 NVDVDDDNDENSSGSGYVLSDVMDVFSLSEAIDIVEKAEKARKFSDELNLKELKLYEEEE 180

Query: 185 EE---RSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           EE   +++ +YNCSSNFMIERFLPDATALAASS+LN  AFSP+RVA++ FSPPKGCGL +
Sbjct: 181 EEEEGKNNGNYNCSSNFMIERFLPDATALAASSMLNRHAFSPQRVAKRPFSPPKGCGLVV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 278

BLAST of Sed0001003.1 vs. NCBI nr
Match: XP_008464220.1 (PREDICTED: uncharacterized protein LOC103502152 [Cucumis melo] >KAA0037732.1 uncharacterized protein E6C27_scaffold141G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 398.7 bits (1023), Expect = 4.2e-107
Identity = 210/278 (75.54%), Postives = 235/278 (84.53%), Query Frame = 0

Query: 5   MEHQDDERQTLG-HHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+R + G HHIARKLNFNAPLLTTRRPAANV   R+S+S S R S S+T DRVPF
Sbjct: 1   MEHQDDDRHSYGHHHIARKLNFNAPLLTTRRPAANVDLDRVSVSGSVRISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCDDD---DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFN 124
           CWEQAPGKPKEY ERC D     G A TPRPTLPPGWWRPP+QTRRNSRH HCND H  +
Sbjct: 61  CWEQAPGKPKEYAERCHDSADHGGDATTPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCD 120

Query: 125 DNADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLY--D 184
           DN D   +ND NSSGSGYVLS+ +DVFSLSEAIDIVEKAEKA KFSDEL LK++KL+  +
Sbjct: 121 DNVDVDDNNDENSSGSGYVLSDVMDVFSLSEAIDIVEKAEKARKFSDELNLKELKLHEEE 180

Query: 185 DDEEERSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           ++EEER++ +YN SSNFMIERFLPDATALAASSVLN  AFSP+RVA++ FSPPKGCGLD+
Sbjct: 181 EEEEERNNGNYNRSSNFMIERFLPDATALAASSVLNRHAFSPQRVAKRPFSPPKGCGLDV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 278

BLAST of Sed0001003.1 vs. NCBI nr
Match: TYK10929.1 (uncharacterized protein E5676_scaffold107G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 382.1 bits (980), Expect = 4.0e-102
Identity = 205/278 (73.74%), Postives = 229/278 (82.37%), Query Frame = 0

Query: 5   MEHQDDERQTLG-HHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+R + G HHIARKLNFNAPLLTTRRPAANV   R+S+S S R S S+T DRVPF
Sbjct: 1   MEHQDDDRHSYGHHHIARKLNFNAPLLTTRRPAANVDLDRVSVSGSVRISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCD---DDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFN 124
           CWEQAPGKPKEY ERC    D  G + TPRPTLPPGWWRPP+QTRRNSRH HCND H  +
Sbjct: 61  CWEQAPGKPKEYAERCHDAVDHGGDSTTPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCD 120

Query: 125 DNADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLY--D 184
           DN D   +ND NSSGSGY       VFSLSEAIDIVEKAEKA KFSDEL LK++KL+  +
Sbjct: 121 DNVDVDDNNDENSSGSGY-------VFSLSEAIDIVEKAEKARKFSDELNLKELKLHEEE 180

Query: 185 DDEEERSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           ++EEER++ +YN SSNFMIERFLPDATALAASSVLN  AFSP+RVA++ FSPPKGCGLD+
Sbjct: 181 EEEEERNNGNYNRSSNFMIERFLPDATALAASSVLNRHAFSPQRVAKRPFSPPKGCGLDV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 271

BLAST of Sed0001003.1 vs. NCBI nr
Match: XP_022144027.1 (uncharacterized protein LOC111013819 [Momordica charantia])

HSP 1 Score: 330.1 bits (845), Expect = 1.8e-86
Identity = 186/280 (66.43%), Postives = 213/280 (76.07%), Query Frame = 0

Query: 5   MEHQDDER--QTLGHHIARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCW 64
           ME Q++ +  Q+ GHHIARKLNFNAPLLTTRR   + A L+ISA+ RRSSST DRVPF W
Sbjct: 1   MELQENHQPSQSYGHHIARKLNFNAPLLTTRR---SPAALTISAAARRSSSTSDRVPFSW 60

Query: 65  EQAPGKPKEYVERCD--DDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNAD 124
           EQAPGKPK+YVERCD   DDGAAATPRPTLPPGWWRPP+QT                   
Sbjct: 61  EQAPGKPKDYVERCDASTDDGAAATPRPTLPPGWWRPPVQTNSG---------------- 120

Query: 125 DCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDEEER 184
              D+D+NS+   YVLS+ +DVFSLSEAIDIVEKAEKAHKFSDELKLKQ+K  +++EEER
Sbjct: 121 ---DDDNNSNNGSYVLSDVVDVFSLSEAIDIVEKAEKAHKFSDELKLKQLKYEEEEEEER 180

Query: 185 SDH--SYNCSSNFMIERFLPDATALAASSV----LNSDAFSPKRVA--RQSFSPPKGCGL 244
           S+   +Y  SSNFM+ERFLPDATALAASSV    LN    SP+RVA  RQ FSPP+GCGL
Sbjct: 181 SNSGCNYKLSSNFMMERFLPDATALAASSVLKLKLNHHGLSPQRVARRRQPFSPPEGCGL 240

Query: 245 DMLIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           D+L PWRTK  HQLCGVKSPV+  GRSL S +SAKQKK+H
Sbjct: 241 DVLFPWRTK--HQLCGVKSPVRHGGRSLKSTSSAKQKKQH 256

BLAST of Sed0001003.1 vs. ExPASy TrEMBL
Match: A0A0A0KY11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312800 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.9e-108
Identity = 212/278 (76.26%), Postives = 236/278 (84.89%), Query Frame = 0

Query: 5   MEHQDDERQT-LGHHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+RQ+ + HHIARKLNFNAPLLTTRRPAANV   RLSIS S R S S+T DRVPF
Sbjct: 1   MEHQDDDRQSYVHHHIARKLNFNAPLLTTRRPAANVDLDRLSISGSARISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCD--DDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFND 124
           CWEQAPGKPKEYVERC      G A TPRPTLPPGWWRPP+QTRRNSRH HCND H  +D
Sbjct: 61  CWEQAPGKPKEYVERCHAAAHGGDAITPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCDD 120

Query: 125 NADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDE 184
           N D   DND NSSGSGYVLS+ +DVFSLSEAIDIVEKAEKA KFSDEL LK++KLY+++E
Sbjct: 121 NVDVDDDNDENSSGSGYVLSDVMDVFSLSEAIDIVEKAEKARKFSDELNLKELKLYEEEE 180

Query: 185 EE---RSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           EE   +++ +YNCSSNFMIERFLPDATALAASS+LN  AFSP+RVA++ FSPPKGCGL +
Sbjct: 181 EEEEGKNNGNYNCSSNFMIERFLPDATALAASSMLNRHAFSPQRVAKRPFSPPKGCGLVV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 278

BLAST of Sed0001003.1 vs. ExPASy TrEMBL
Match: A0A5A7T2N8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00280 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107
Identity = 210/278 (75.54%), Postives = 235/278 (84.53%), Query Frame = 0

Query: 5   MEHQDDERQTLG-HHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+R + G HHIARKLNFNAPLLTTRRPAANV   R+S+S S R S S+T DRVPF
Sbjct: 1   MEHQDDDRHSYGHHHIARKLNFNAPLLTTRRPAANVDLDRVSVSGSVRISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCDDD---DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFN 124
           CWEQAPGKPKEY ERC D     G A TPRPTLPPGWWRPP+QTRRNSRH HCND H  +
Sbjct: 61  CWEQAPGKPKEYAERCHDSADHGGDATTPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCD 120

Query: 125 DNADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLY--D 184
           DN D   +ND NSSGSGYVLS+ +DVFSLSEAIDIVEKAEKA KFSDEL LK++KL+  +
Sbjct: 121 DNVDVDDNNDENSSGSGYVLSDVMDVFSLSEAIDIVEKAEKARKFSDELNLKELKLHEEE 180

Query: 185 DDEEERSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           ++EEER++ +YN SSNFMIERFLPDATALAASSVLN  AFSP+RVA++ FSPPKGCGLD+
Sbjct: 181 EEEEERNNGNYNRSSNFMIERFLPDATALAASSVLNRHAFSPQRVAKRPFSPPKGCGLDV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 278

BLAST of Sed0001003.1 vs. ExPASy TrEMBL
Match: A0A1S3CKZ5 (uncharacterized protein LOC103502152 OS=Cucumis melo OX=3656 GN=LOC103502152 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107
Identity = 210/278 (75.54%), Postives = 235/278 (84.53%), Query Frame = 0

Query: 5   MEHQDDERQTLG-HHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+R + G HHIARKLNFNAPLLTTRRPAANV   R+S+S S R S S+T DRVPF
Sbjct: 1   MEHQDDDRHSYGHHHIARKLNFNAPLLTTRRPAANVDLDRVSVSGSVRISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCDDD---DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFN 124
           CWEQAPGKPKEY ERC D     G A TPRPTLPPGWWRPP+QTRRNSRH HCND H  +
Sbjct: 61  CWEQAPGKPKEYAERCHDSADHGGDATTPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCD 120

Query: 125 DNADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLY--D 184
           DN D   +ND NSSGSGYVLS+ +DVFSLSEAIDIVEKAEKA KFSDEL LK++KL+  +
Sbjct: 121 DNVDVDDNNDENSSGSGYVLSDVMDVFSLSEAIDIVEKAEKARKFSDELNLKELKLHEEE 180

Query: 185 DDEEERSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           ++EEER++ +YN SSNFMIERFLPDATALAASSVLN  AFSP+RVA++ FSPPKGCGLD+
Sbjct: 181 EEEEERNNGNYNRSSNFMIERFLPDATALAASSVLNRHAFSPQRVAKRPFSPPKGCGLDV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 278

BLAST of Sed0001003.1 vs. ExPASy TrEMBL
Match: A0A5D3CL22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00080 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.0e-102
Identity = 205/278 (73.74%), Postives = 229/278 (82.37%), Query Frame = 0

Query: 5   MEHQDDERQTLG-HHIARKLNFNAPLLTTRRPAANV--ARLSISASTRRS-SSTYDRVPF 64
           MEHQDD+R + G HHIARKLNFNAPLLTTRRPAANV   R+S+S S R S S+T DRVPF
Sbjct: 1   MEHQDDDRHSYGHHHIARKLNFNAPLLTTRRPAANVDLDRVSVSGSVRISLSTTSDRVPF 60

Query: 65  CWEQAPGKPKEYVERCD---DDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCND-HNFN 124
           CWEQAPGKPKEY ERC    D  G + TPRPTLPPGWWRPP+QTRRNSRH HCND H  +
Sbjct: 61  CWEQAPGKPKEYAERCHDAVDHGGDSTTPRPTLPPGWWRPPVQTRRNSRHLHCNDGHRCD 120

Query: 125 DNADDCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLY--D 184
           DN D   +ND NSSGSGY       VFSLSEAIDIVEKAEKA KFSDEL LK++KL+  +
Sbjct: 121 DNVDVDDNNDENSSGSGY-------VFSLSEAIDIVEKAEKARKFSDELNLKELKLHEEE 180

Query: 185 DDEEERSDHSYNCSSNFMIERFLPDATALAASSVLNSDAFSPKRVARQSFSPPKGCGLDM 244
           ++EEER++ +YN SSNFMIERFLPDATALAASSVLN  AFSP+RVA++ FSPPKGCGLD+
Sbjct: 181 EEEEERNNGNYNRSSNFMIERFLPDATALAASSVLNRHAFSPQRVAKRPFSPPKGCGLDV 240

Query: 245 LIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           L PWR KHHHQLCGVKSPV+D GRSLGSK+SAKQKK H
Sbjct: 241 LFPWRIKHHHQLCGVKSPVRDGGRSLGSKSSAKQKKHH 271

BLAST of Sed0001003.1 vs. ExPASy TrEMBL
Match: A0A6J1CSI6 (uncharacterized protein LOC111013819 OS=Momordica charantia OX=3673 GN=LOC111013819 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 8.8e-87
Identity = 186/280 (66.43%), Postives = 213/280 (76.07%), Query Frame = 0

Query: 5   MEHQDDER--QTLGHHIARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCW 64
           ME Q++ +  Q+ GHHIARKLNFNAPLLTTRR   + A L+ISA+ RRSSST DRVPF W
Sbjct: 1   MELQENHQPSQSYGHHIARKLNFNAPLLTTRR---SPAALTISAAARRSSSTSDRVPFSW 60

Query: 65  EQAPGKPKEYVERCD--DDDGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNAD 124
           EQAPGKPK+YVERCD   DDGAAATPRPTLPPGWWRPP+QT                   
Sbjct: 61  EQAPGKPKDYVERCDASTDDGAAATPRPTLPPGWWRPPVQTNSG---------------- 120

Query: 125 DCHDNDHNSSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDEEER 184
              D+D+NS+   YVLS+ +DVFSLSEAIDIVEKAEKAHKFSDELKLKQ+K  +++EEER
Sbjct: 121 ---DDDNNSNNGSYVLSDVVDVFSLSEAIDIVEKAEKAHKFSDELKLKQLKYEEEEEEER 180

Query: 185 SDH--SYNCSSNFMIERFLPDATALAASSV----LNSDAFSPKRVA--RQSFSPPKGCGL 244
           S+   +Y  SSNFM+ERFLPDATALAASSV    LN    SP+RVA  RQ FSPP+GCGL
Sbjct: 181 SNSGCNYKLSSNFMMERFLPDATALAASSVLKLKLNHHGLSPQRVARRRQPFSPPEGCGL 240

Query: 245 DMLIPWRTKHHHQLCGVKSPVKDIGRSLGSKTSAKQKKEH 273
           D+L PWRTK  HQLCGVKSPV+  GRSL S +SAKQKK+H
Sbjct: 241 DVLFPWRTK--HQLCGVKSPVRHGGRSLKSTSSAKQKKQH 256

BLAST of Sed0001003.1 vs. TAIR 10
Match: AT3G51760.1 (Protein of unknown function (DUF688) )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 83/253 (32.81%), Postives = 122/253 (48.22%), Query Frame = 0

Query: 20  ARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCWEQAPGKPKEYVERCDDD 79
           +R+LNFNAP L+T+R   +V +  +      +S     VPFCWE APG PK        +
Sbjct: 16  SRRLNFNAPFLSTKR---HVTQEKLPGQFPEAS-----VPFCWETAPGMPKNSSHL--KN 75

Query: 80  DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNADDCHDN-----------DHN 139
           D  + TPR  LPPG  +  +  +             ND+ DD  ++            +N
Sbjct: 76  DAESETPRLKLPPGRLKVQVTGK-------------NDDLDDASESLTPAKLLHMKKRNN 135

Query: 140 SSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDE----EERSDHS 199
                    + +DV SL++AID+VE  + +   SD+    +  +  D       E ++ S
Sbjct: 136 QEYFHQTNQDAVDVLSLTQAIDMVELPKDSVSESDD---DRSSVGGDSNGYLTMESTERS 195

Query: 200 YNCSSNFMIERFLPDATALAASSVLNSDAFSPK------RVARQSFSPPKGCGLDMLIPW 252
            + S +++IERFLPDA ALAA +   S     K         RQS   PK CGL +L+PW
Sbjct: 196 EDMSPSYIIERFLPDAAALAAVTSAASQRRKKKLSYLSGETVRQSCFSPKACGLHVLLPW 240

BLAST of Sed0001003.1 vs. TAIR 10
Match: AT3G51760.2 (Protein of unknown function (DUF688) )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 83/253 (32.81%), Postives = 122/253 (48.22%), Query Frame = 0

Query: 20  ARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCWEQAPGKPKEYVERCDDD 79
           +R+LNFNAP L+T+R   +V +  +      +S     VPFCWE APG PK        +
Sbjct: 16  SRRLNFNAPFLSTKR---HVTQEKLPGQFPEAS-----VPFCWETAPGMPKNSSHL--KN 75

Query: 80  DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNADDCHDN-----------DHN 139
           D  + TPR  LPPG  +  +  +             ND+ DD  ++            +N
Sbjct: 76  DAESETPRLKLPPGRLKVQVTGK-------------NDDLDDASESLTPAKLLHMKKRNN 135

Query: 140 SSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDE----EERSDHS 199
                    + +DV SL++AID+VE  + +   SD+    +  +  D       E ++ S
Sbjct: 136 QEYFHQTNQDAVDVLSLTQAIDMVELPKDSVSESDD---DRSSVGGDSNGYLTMESTERS 195

Query: 200 YNCSSNFMIERFLPDATALAASSVLNSDAFSPK------RVARQSFSPPKGCGLDMLIPW 252
            + S +++IERFLPDA ALAA +   S     K         RQS   PK CGL +L+PW
Sbjct: 196 EDMSPSYIIERFLPDAAALAAVTSAASQRRKKKLSYLSGETVRQSCFSPKACGLHVLLPW 240

BLAST of Sed0001003.1 vs. TAIR 10
Match: AT3G51760.4 (Protein of unknown function (DUF688) )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 83/253 (32.81%), Postives = 122/253 (48.22%), Query Frame = 0

Query: 20  ARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCWEQAPGKPKEYVERCDDD 79
           +R+LNFNAP L+T+R   +V +  +      +S     VPFCWE APG PK        +
Sbjct: 7   SRRLNFNAPFLSTKR---HVTQEKLPGQFPEAS-----VPFCWETAPGMPKNSSHL--KN 66

Query: 80  DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNADDCHDN-----------DHN 139
           D  + TPR  LPPG  +  +  +             ND+ DD  ++            +N
Sbjct: 67  DAESETPRLKLPPGRLKVQVTGK-------------NDDLDDASESLTPAKLLHMKKRNN 126

Query: 140 SSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDE----EERSDHS 199
                    + +DV SL++AID+VE  + +   SD+    +  +  D       E ++ S
Sbjct: 127 QEYFHQTNQDAVDVLSLTQAIDMVELPKDSVSESDD---DRSSVGGDSNGYLTMESTERS 186

Query: 200 YNCSSNFMIERFLPDATALAASSVLNSDAFSPK------RVARQSFSPPKGCGLDMLIPW 252
            + S +++IERFLPDA ALAA +   S     K         RQS   PK CGL +L+PW
Sbjct: 187 EDMSPSYIIERFLPDAAALAAVTSAASQRRKKKLSYLSGETVRQSCFSPKACGLHVLLPW 231

BLAST of Sed0001003.1 vs. TAIR 10
Match: AT3G51760.3 (Protein of unknown function (DUF688) )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 83/253 (32.81%), Postives = 122/253 (48.22%), Query Frame = 0

Query: 20  ARKLNFNAPLLTTRRPAANVARLSISASTRRSSSTYDRVPFCWEQAPGKPKEYVERCDDD 79
           +R+LNFNAP L+T+R   +V +  +      +S     VPFCWE APG PK        +
Sbjct: 7   SRRLNFNAPFLSTKR---HVTQEKLPGQFPEAS-----VPFCWETAPGMPKNSSHL--KN 66

Query: 80  DGAAATPRPTLPPGWWRPPIQTRRNSRHDHCNDHNFNDNADDCHDN-----------DHN 139
           D  + TPR  LPPG  +  +  +             ND+ DD  ++            +N
Sbjct: 67  DAESETPRLKLPPGRLKVQVTGK-------------NDDLDDASESLTPAKLLHMKKRNN 126

Query: 140 SSGSGYVLSETIDVFSLSEAIDIVEKAEKAHKFSDELKLKQVKLYDDDE----EERSDHS 199
                    + +DV SL++AID+VE  + +   SD+    +  +  D       E ++ S
Sbjct: 127 QEYFHQTNQDAVDVLSLTQAIDMVELPKDSVSESDD---DRSSVGGDSNGYLTMESTERS 186

Query: 200 YNCSSNFMIERFLPDATALAASSVLNSDAFSPK------RVARQSFSPPKGCGLDMLIPW 252
            + S +++IERFLPDA ALAA +   S     K         RQS   PK CGL +L+PW
Sbjct: 187 EDMSPSYIIERFLPDAAALAAVTSAASQRRKKKLSYLSGETVRQSCFSPKACGLHVLLPW 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883247.18.4e-10876.09uncharacterized protein LOC120074256 [Benincasa hispida][more]
XP_011654375.11.4e-10776.26uncharacterized protein LOC105435371 [Cucumis sativus] >KGN54398.1 hypothetical ... [more]
XP_008464220.14.2e-10775.54PREDICTED: uncharacterized protein LOC103502152 [Cucumis melo] >KAA0037732.1 unc... [more]
TYK10929.14.0e-10273.74uncharacterized protein E5676_scaffold107G00080 [Cucumis melo var. makuwa][more]
XP_022144027.11.8e-8666.43uncharacterized protein LOC111013819 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KY116.9e-10876.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312800 PE=4 SV=1[more]
A0A5A7T2N82.0e-10775.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CKZ52.0e-10775.54uncharacterized protein LOC103502152 OS=Cucumis melo OX=3656 GN=LOC103502152 PE=... [more]
A0A5D3CL222.0e-10273.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CSI68.8e-8766.43uncharacterized protein LOC111013819 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
AT3G51760.11.1e-2032.81Protein of unknown function (DUF688) [more]
AT3G51760.21.1e-2032.81Protein of unknown function (DUF688) [more]
AT3G51760.41.1e-2032.81Protein of unknown function (DUF688) [more]
AT3G51760.31.1e-2032.81Protein of unknown function (DUF688) [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007789Protein of unknown function DUF688PFAMPF05097DUF688coord: 21..207
e-value: 2.4E-8
score: 33.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..97
NoneNo IPR availablePANTHERPTHR33671N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATEDcoord: 15..272
NoneNo IPR availablePANTHERPTHR33671:SF1BNAC07G32500D PROTEINcoord: 15..272

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sed0001003Sed0001003gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0001003.1-cdsSed0001003.1-cds-LG03:34801339..34801862CDS
Sed0001003.1-cdsSed0001003.1-cds-LG03:34802745..34803048CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0001003.1-exonSed0001003.1-exon-LG03:34801339..34801862exon
Sed0001003.1-exonSed0001003.1-exon-LG03:34802745..34803071exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sed0001003.1-five_prime_utrSed0001003.1-five_prime_utr-LG03:34803049..34803071five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sed0001003.1Sed0001003.1-proteinpolypeptide