Pay0021677.1 (mRNA) Melon (Payzawat) v1

Overview


Name	Pay0021677.1
Type	mRNA
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	Phylloplanin-like
Location	chr06: 4706423 .. 4707353 (-)
Sequence length	705
RNA-Seq Expression	Pay0021677.1
Synteny	Pay0021677.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGATTAGAAGAGAAAAGAAAGAAAAGAAAATGGGTTTGAGATCGAAAATGTTTGTTATGGTGATGGTTATTGGTGCTTTGGGATCTGCTCCATTGATGGTGGAATCTCAGCTGTTGGTTAACCCTCTTGTCACGATCAATGGATCTCTTACTGGCATTCCCGGTGGCAGCCTTGTAGGCATCCCTGTCTCAAGTAATAATAATTAACCCAGTTTCCATATAATCAATTTCTACATTTTTTTTTCTTTTCTTAGAGTTTTTTTAGCATGGCGTTCTCTTTCGTTAAACAAATATACCAATCCTTATAGTCGATTTTCAAACACTGTTGTCGTTGTACTCCGTGAAGGCATGAACACAGGTTATGAGGTTAAAAATATAAATATTTTGAACGTTTTCCTCGTGATTTTTACACACAACAGATGCAACAGTGGAATTGGATTGCAACGGGACTGTTTTGTCAACTACAACAACGAACAGCATGGGATCCTTTCTCCTGTCATCGTCATTGAATAATCCTACCCAAATCAATGGTCTCTTGAATGGTTGTGCCGCTGTCGTTAGCACGCCGTTGTCAGTCTTCAACCCGATAGATCTTGAATCTTTTGGAACTTTCAGGTTCAGTACGAACATAAGGATAGTGGATAATGGTGATGACTAACTGAACCAGGTTCCTGCCATTTCCAGTAACGTGGGCTAAATATATATTTACAAAAGAGGATGATGGAGAATATCAATTATAGTATTTTACTACTTTCGTCTGATAAAATTGTACCTTGACTTATCTCTCTAAGTAATTTAATATCTAATAATATAACTACTTTTAGTTTACCCTACCCTGCTTTAAAATAATTATAGATTGTTGTGGTTAAGCAGAATAAAATATTTTAAAATATTTACATTTTCATTTTATCGATAATAATAAGTATATTG

mRNA sequence

GCAGATTAGAAGAGAAAAGAAAGAAAAGAAAATGGGTTTGAGATCGAAAATGTTTGTTATGGTGATGGTTATTGGTGCTTTGGGATCTGCTCCATTGATGGTGGAATCTCAGCTGTTGGTTAACCCTCTTGTCACGATCAATGGATCTCTTACTGGCATTCCCGGTGGCAGCCTTGTAGGCATCCCTGTCTCAAATGCAACAGTGGAATTGGATTGCAACGGGACTGTTTTGTCAACTACAACAACGAACAGCATGGGATCCTTTCTCCTGTCATCGTCATTGAATAATCCTACCCAAATCAATGGTCTCTTGAATGGTTGTGCCGCTGTCGTTAGCACGCCGTTGTCAGTCTTCAACCCGATAGATCTTGAATCTTTTGGAACTTTCAGGTTCAGTACGAACATAAGGATAGTGGATAATGGTGATGACTAACTGAACCAGGTTCCTGCCATTTCCAGTAACGTGGGCTAAATATATATTTACAAAAGAGGATGATGGAGAATATCAATTATAGTATTTTACTACTTTCGTCTGATAAAATTGTACCTTGACTTATCTCTCTAAGTAATTTAATATCTAATAATATAACTACTTTTAGTTTACCCTACCCTGCTTTAAAATAATTATAGATTGTTGTGGTTAAGCAGAATAAAATATTTTAAAATATTTACATTTTCATTTTATCGATAATAATAAGTATATTG

Coding sequence (CDS)

ATGGGTTTGAGATCGAAAATGTTTGTTATGGTGATGGTTATTGGTGCTTTGGGATCTGCTCCATTGATGGTGGAATCTCAGCTGTTGGTTAACCCTCTTGTCACGATCAATGGATCTCTTACTGGCATTCCCGGTGGCAGCCTTGTAGGCATCCCTGTCTCAAATGCAACAGTGGAATTGGATTGCAACGGGACTGTTTTGTCAACTACAACAACGAACAGCATGGGATCCTTTCTCCTGTCATCGTCATTGAATAATCCTACCCAAATCAATGGTCTCTTGAATGGTTGTGCCGCTGTCGTTAGCACGCCGTTGTCAGTCTTCAACCCGATAGATCTTGAATCTTTTGGAACTTTCAGGTTCAGTACGAACATAAGGATAGTGGATAATGGTGATGACTAA

Protein sequence

MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIRIVDNGDD

Homology

[Close]

BLAST of Pay0021677.1 vs. ExPASy TrEMBL
Match: A0A1S3AX34 (uncharacterized protein LOC103483852 OS=Cucumis melo OX=3656 GN=LOC103483852 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVEL 60
           MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVEL
Sbjct: 1   MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVEL 60

Query: 61  DCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFR 120
           DCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFR
Sbjct: 61  DCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFR 120

Query: 121 FSTNIRIVDNGDD 134
           FSTNIRIVDNGDD
Sbjct: 121 FSTNIRIVDNGDD 133

[Close]

BLAST of Pay0021677.1 vs. ExPASy TrEMBL
Match: A0A5D3CWD4 (Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001110 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.9e-60
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 7   MFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTV 66
           MFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTV
Sbjct: 1   MFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTV 60

Query: 67  LSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIR 126
           LSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIR
Sbjct: 61  LSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIR 120

Query: 127 IVDNGDD 134
           IVDNGDD
Sbjct: 121 IVDNGDD 127

[Close]

BLAST of Pay0021677.1 vs. ExPASy TrEMBL
Match: A0A5D3CZ16 (Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001120 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.5e-11
Identity = 67/148 (45.27%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQL--LVNPLV-----------TINGSLTGIPGGS 60
           MGL+SKM VMVMVIGALGSAPLM E+QL  ++  L+           T +G++  I   S
Sbjct: 1   MGLKSKMLVMVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATS 60

Query: 61  LVGIPVSNATVELDC-NGTVLSTTTTNSMGSFLLSSSLNNPTQ--INGLLNGCAAVVSTP 120
               P  NA V+L C NG ++STTTTN+MGSF   S L NP Q  ++ LL  C  VV TP
Sbjct: 61  TPVFP--NAVVQLQCGNGNIVSTTTTNNMGSF---SMLLNPLQFLLSTLLTDCNVVVRTP 120

Query: 121 LSVFN-PIDLESFGTFRFSTNIRIVDNG 132
           L   N  +    F T R     R V +G
Sbjct: 121 LINCNATLPSTGFLTSRMQFVGRFVQDG 143

[Close]

BLAST of Pay0021677.1 vs. ExPASy TrEMBL
Match: A0A1S3AXJ8 (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.5e-11
Identity = 67/148 (45.27%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQL--LVNPLV-----------TINGSLTGIPGGS 60
           MGL+SKM VMVMVIGALGSAPLM E+QL  ++  L+           T +G++  I   S
Sbjct: 1   MGLKSKMLVMVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATS 60

Query: 61  LVGIPVSNATVELDC-NGTVLSTTTTNSMGSFLLSSSLNNPTQ--INGLLNGCAAVVSTP 120
               P  NA V+L C NG ++STTTTN+MGSF   S L NP Q  ++ LL  C  VV TP
Sbjct: 61  TPVFP--NAVVQLQCGNGNIVSTTTTNNMGSF---SMLLNPLQFLLSTLLTDCNVVVRTP 120

Query: 121 LSVFN-PIDLESFGTFRFSTNIRIVDNG 132
           L   N  +    F T R     R V +G
Sbjct: 121 LINCNATLPSTGFLTSRMQFVGRFVQDG 143

[Close]

BLAST of Pay0021677.1 vs. ExPASy TrEMBL
Match: A0A0A0L595 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-08
Identity = 54/121 (44.63%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQL--------LVNPLVTINGSLTGIPGGSLVGIP 60
           MGL+S + V+VMV GALGSAPLM E+Q         L+N   T+  +  G  G +    P
Sbjct: 1   MGLKSNLLVLVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTP 60

Query: 61  V-SNATVELDC-NGTVLSTTTTNSMGSFLLSSSLNNPTQ--INGLLNGCAAVVSTPLSVF 110
           V  NA V+L C NG ++STTTTN+ G F   S   NP Q  ++ LL+ C  VV TP+S  
Sbjct: 61  VFPNALVQLQCGNGNIVSTTTTNNGGIF---SMFLNPVQFVLSSLLSNCNLVVKTPISDC 118

[Close]

BLAST of Pay0021677.1 vs. NCBI nr
Match: XP_008438894.1 (PREDICTED: uncharacterized protein LOC103483852 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 8.9e-63
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVEL 60
           MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVEL
Sbjct: 1   MGLRSKMFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVEL 60

Query: 61  DCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFR 120
           DCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFR
Sbjct: 61  DCNGTVLSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFR 120

Query: 121 FSTNIRIVDNGDD 134
           FSTNIRIVDNGDD
Sbjct: 121 FSTNIRIVDNGDD 133

[Close]

BLAST of Pay0021677.1 vs. NCBI nr
Match: KAA0049503.1 (phylloplanin-like [Cucumis melo var. makuwa] >TYK16183.1 phylloplanin-like [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 7   MFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTV 66
           MFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTV
Sbjct: 1   MFVMVMVIGALGSAPLMVESQLLVNPLVTINGSLTGIPGGSLVGIPVSNATVELDCNGTV 60

Query: 67  LSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIR 126
           LSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIR
Sbjct: 61  LSTTTTNSMGSFLLSSSLNNPTQINGLLNGCAAVVSTPLSVFNPIDLESFGTFRFSTNIR 120

Query: 127 IVDNGDD 134
           IVDNGDD
Sbjct: 121 IVDNGDD 127

[Close]

BLAST of Pay0021677.1 vs. NCBI nr
Match: XP_008438895.1 (PREDICTED: phylloplanin-like [Cucumis melo] >KAA0049504.1 phylloplanin-like [Cucumis melo var. makuwa] >TYK16184.1 phylloplanin-like [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-10
Identity = 67/148 (45.27%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQL--LVNPLV-----------TINGSLTGIPGGS 60
           MGL+SKM VMVMVIGALGSAPLM E+QL  ++  L+           T +G++  I   S
Sbjct: 1   MGLKSKMLVMVMVIGALGSAPLMAEAQLGNIIGSLLGVINVQGVVYCTADGNIGTINATS 60

Query: 61  LVGIPVSNATVELDC-NGTVLSTTTTNSMGSFLLSSSLNNPTQ--INGLLNGCAAVVSTP 120
               P  NA V+L C NG ++STTTTN+MGSF   S L NP Q  ++ LL  C  VV TP
Sbjct: 61  TPVFP--NAVVQLQCGNGNIVSTTTTNNMGSF---SMLLNPLQFLLSTLLTDCNVVVRTP 120

Query: 121 LSVFN-PIDLESFGTFRFSTNIRIVDNG 132
           L   N  +    F T R     R V +G
Sbjct: 121 LINCNATLPSTGFLTSRMQFVGRFVQDG 143

[Close]

BLAST of Pay0021677.1 vs. NCBI nr
Match: XP_004134491.2 (phylloplanin [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_011182 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 4.8e-08
Identity = 54/121 (44.63%), Postives = 70/121 (57.85%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQL--------LVNPLVTINGSLTGIPGGSLVGIP 60
           MGL+S + V+VMV GALGSAPLM E+Q         L+N   T+  +  G  G +    P
Sbjct: 1   MGLKSNLLVLVMVFGALGSAPLMAEAQFNIIGSLLKLINIQGTVFCTADGNIGTNATSTP 60

Query: 61  V-SNATVELDC-NGTVLSTTTTNSMGSFLLSSSLNNPTQ--INGLLNGCAAVVSTPLSVF 110
           V  NA V+L C NG ++STTTTN+ G F   S   NP Q  ++ LL+ C  VV TP+S  
Sbjct: 61  VFPNALVQLQCGNGNIVSTTTTNNGGIF---SMFLNPVQFVLSSLLSNCNLVVKTPISDC 118

[Close]

BLAST of Pay0021677.1 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida])

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-06
Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MGLRSKMFVMVMVIGALGSAPLMVESQL-LVNPLV-----------TINGSLTGIPGGSL 60
           MGL+S +FV+V ++GA+G APLMVE+QL +V  L+           T NG++ GI G + 
Sbjct: 1   MGLKSVLFVLV-IVGAMG-APLMVEAQLGIVGSLLGLIRIQGTVFCTANGNI-GINGTAT 60

Query: 61  VGIPVSNATVELDC-NGTVLSTTTTNSMGSFLLSSSLNNPTQ--INGLLNGCAAVVSTPL 118
              P  NA+V+L C NG ++STTTTN+MG F   S L NP Q  ++ + + C+ VV+TPL
Sbjct: 61  PIFP--NASVQLQCGNGNIVSTTTTNNMGVF---SILLNPLQFLLSLITSSCSTVVNTPL 120

The following BLAST results are available for this feature:

BLAST of Pay0021677.1 vs.


Match Name	E-value	Identity	Description

BLAST of Pay0021677.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AX34	4.3e-63	100.00	uncharacterized protein LOC103483852 OS=Cucumis melo OX=3656 GN=LOC103483852 PE=...	[more]
A0A5D3CWD4	9.9e-60	100.00	Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A5D3CZ16	8.5e-11	45.27	Phylloplanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A1S3AXJ8	8.5e-11	45.27	phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1	[more]
A0A0A0L595	2.3e-08	44.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1	[more]

BLAST of Pay0021677.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438894.1	8.9e-63	100.00	PREDICTED: uncharacterized protein LOC103483852 [Cucumis melo]	[more]
KAA0049503.1	2.0e-59	100.00	phylloplanin-like [Cucumis melo var. makuwa] >TYK16183.1 phylloplanin-like [Cucu...	[more]
XP_008438895.1	1.8e-10	45.27	PREDICTED: phylloplanin-like [Cucumis melo] >KAA0049504.1 phylloplanin-like [Cuc...	[more]
XP_004134491.2	4.8e-08	44.63	phylloplanin [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_011182 [Cucu...	[more]
XP_038903470.1	2.6e-06	44.70	phylloplanin-like [Benincasa hispida]	[more]

BLAST of Pay0021677.1 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040404	Phylloplanin-like	PANTHER	PTHR34458	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN-RELATED	coord: 1..120
None	No IPR available	PANTHER	PTHR34458:SF5	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 1..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Pay0021677	Pay0021677	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0021677.1-three_prime_utr	Pay0021677.1-three_prime_utr-chr06:4706423..4706694	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0021677.1-exon	Pay0021677.1-exon-chr06:4706423..4706933	exon
Pay0021677.1-exon	Pay0021677.1-exon-chr06:4707160..4707353	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0021677.1-cds	Pay0021677.1-cds-chr06:4706695..4706933	CDS
Pay0021677.1-cds	Pay0021677.1-cds-chr06:4707160..4707322	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Pay0021677.1-five_prime_utr	Pay0021677.1-five_prime_utr-chr06:4707323..4707353	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Pay0021677.1	Pay0021677.1-protein	polypeptide