
Pay0021588.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATTCCGTTTCCGTTTCATTGGTTCCGTAATATCCCTTATTTTCTTCTTTCCCATTTTCCTTAAAACTCGCTAATAAAATTTCCCAAGAAATTTCAGGAAAAAAAAAACAAAAAACAAAACAAAACAAAATTCCTAATCCAATTACCACTCTCCCCCCCTTCCCAATCAATCCCATTCACCATTTTTTCTTTATGGTCAGTTCTTCCTTCTTCTTCTTCATTCTCTTTTCTTGTTTTTCTTCCAACACCTGCATCAGATTAAAAATGCGATTCTTTATTCCTTTTCTTTTTGGTTCTTAATCGTTATGATGTTGTTGGATCTGGCAGGTGTTAGGCTCGGTATTTGATTAGGATTAATTTGTTCAAATGGCTTACAAGGTGGATCATGAATACGATTATCTCTTCAAGATTGTCTTGATCGGTGATTCTGGCGTTGGAAAATCCAATATTCTCTCCAGGTTTACGCGTAACGAATTCTGTTTGGAATCCAAGTCCACCATTGGTGTTGAATTCGCTACACGGACTTTGCAGGTTGTTTACGCTACACTCTATTTTTATATTCCTTTTTTTTTCTTTAATCAAAGTCATTTCTTTCTCATTTAGATCGTTGATCGTGTTATTACGTTACTTATTTAACAATTCCATGAGTTTGATTCTGGTGGGATGAGAATCCTAAATCAGGAGATTTCGTTTAAATTAGAACATTGATATTGTAATTGTATATCAATAGGCCTGAATTGATCATTTTCTCCAAGTTTGAATCTGACTTTAGGAAGGAGGATATGAATATTGACTCGCATATTTCTTCCCTTCCCATTTGTTTATGAACTGATTTGAGCCGAAGACCAAATTTGACTATTCATGTGCCACCTGTTATGATATAATATTAAATTTACATTTATACATCTCTGTAATCTATTCTAAAAGGAGGGGTTCAAAAAGTCCTTTGTTCAAACTCTGTAATAATAATGTATGTTGTTTCCTTTGTAATTATAGCTAGTTTTCTGTATATATCAAAACCTAAACTTGAAGGAAAAGTATTAAAAGCGAGATACCATGTTAATTAGGAGCTAAAAATTTAATAGGTTATTACTTTCGATACCATTTAGACTTAAAAATTTCTTGAAATCCTAACGAGTTGAAATCAATATTAATTGAGAAATGAGAAGTAATTAACAATTGGAGAAGGTTTTGATGCAGGACCTTTTTAACACTCTTATATTATATTAAATCGCTAATGAACTCTAAACTAAAGTTAGGTGAAGGTAAATTTAATGTTACATGTTAACATATTAAAGTAGATGATCGTTGAGAATGGTTTGAGACAGGTAGAGGGGAAGACAGTGAAGGCTCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACAAGTGCTTATTACAGGGGAGCAGTTGGTGCACTTTTGGTTTATGATATAACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGTGAACTGAGAGACCATGCTGATTCCAATATCGTGATCATGATGGCCGGAAACAAGGCGGATCTTAACCATCTCCGGGCAGTTTCCGCGGAAGATGCTCAGCTTTTGGCAGAAAAAGAAGGGCTGTCATTCCTTGAAACTTCAGCTTTGGAGGCCTTGAATGTTGAGAAGGCTTTCCAGACCATTTTGCTTGACATTTATCATATCATTAGCAAGAAAGCTTTGGCTGCTCAGGAAGCCACCTCCAACCCCGGCCTCCCTCATGGCACGACCATCAACGTCGCGAATCTCTCAGGCAATTACAGCAAGAGAAGTTGTTGCTCCAATTGATCATGTGATATGATGTGGTTTTGGGGGACAAGATCAACCAAAAAAGAAAAAAGAGAGAGAGAGAGAGAGAGAAATAGTAAAAAAAAAAAAAAGGTTTTTGTTGTAAAAGGCAAGATGAATAGAGAGATACCCTTTTCAATATATATTTTTTCATAGATGGAAAGGAGAGAAGAGAGAGAATCAAAGTGAACTCAGGCTGCTTCTTCCATTTTTATCTAAACTAATTTTGTTTGTTTCAATGGAAAAATGAGACATTTTTCATCCAGGATGTAGCTTCTTCTATTATTATTATTAATATCATCATCATTGTCATTCTTTTT TTATTCCGTTTCCGTTTCATTGGTTCCGTAATATCCCTTATTTTCTTCTTTCCCATTTTCCTTAAAACTCGCTAATAAAATTTCCCAAGAAATTTCAGGAAAAAAAAAACAAAAAACAAAACAAAACAAAATTCCTAATCCAATTACCACTCTCCCCCCCTTCCCAATCAATCCCATTCACCATTTTTTCTTTATGGTGTTAGGCTCGGTATTTGATTAGGATTAATTTGTTCAAATGGCTTACAAGGTGGATCATGAATACGATTATCTCTTCAAGATTGTCTTGATCGGTGATTCTGGCGTTGGAAAATCCAATATTCTCTCCAGGTTTACGCGTAACGAATTCTGTTTGGAATCCAAGTCCACCATTGGTGTTGAATTCGCTACACGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCTCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACAAGTGCTTATTACAGGGGAGCAGTTGGTGCACTTTTGGTTTATGATATAACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGTGAACTGAGAGACCATGCTGATTCCAATATCGTGATCATGATGGCCGGAAACAAGGCGGATCTTAACCATCTCCGGGCAGTTTCCGCGGAAGATGCTCAGCTTTTGGCAGAAAAAGAAGGGCTGTCATTCCTTGAAACTTCAGCTTTGGAGGCCTTGAATGTTGAGAAGGCTTTCCAGACCATTTTGCTTGACATTTATCATATCATTAGCAAGAAAGCTTTGGCTGCTCAGGAAGCCACCTCCAACCCCGGCCTCCCTCATGGCACGACCATCAACGTCGCGAATCTCTCAGGCAATTACAGCAAGAGAAGTTGTTGCTCCAATTGATCATGTGATATGATGTGGTTTTGGGGGACAAGATCAACCAAAAAAGAAAAAAGAGAGAGAGAGAGAGAGAGAAATAGTAAAAAAAAAAAAAAGGTTTTTGTTGTAAAAGGCAAGATGAATAGAGAGATACCCTTTTCAATATATATTTTTTCATAGATGGAAAGGAGAGAAGAGAGAGAATCAAAGTGAACTCAGGCTGCTTCTTCCATTTTTATCTAAACTAATTTTGTTTGTTTCAATGGAAAAATGAGACATTTTTCATCCAGGATGTAGCTTCTTCTATTATTATTATTAATATCATCATCATTGTCATTCTTTTT ATGGCTTACAAGGTGGATCATGAATACGATTATCTCTTCAAGATTGTCTTGATCGGTGATTCTGGCGTTGGAAAATCCAATATTCTCTCCAGGTTTACGCGTAACGAATTCTGTTTGGAATCCAAGTCCACCATTGGTGTTGAATTCGCTACACGGACTTTGCAGGTAGAGGGGAAGACAGTGAAGGCTCAAATATGGGACACAGCAGGGCAAGAGAGATACCGAGCCATTACAAGTGCTTATTACAGGGGAGCAGTTGGTGCACTTTTGGTTTATGATATAACCAAGAGACAAACCTTTGACAATGTCCAAAGATGGCTACGTGAACTGAGAGACCATGCTGATTCCAATATCGTGATCATGATGGCCGGAAACAAGGCGGATCTTAACCATCTCCGGGCAGTTTCCGCGGAAGATGCTCAGCTTTTGGCAGAAAAAGAAGGGCTGTCATTCCTTGAAACTTCAGCTTTGGAGGCCTTGAATGTTGAGAAGGCTTTCCAGACCATTTTGCTTGACATTTATCATATCATTAGCAAGAAAGCTTTGGCTGCTCAGGAAGCCACCTCCAACCCCGGCCTCCCTCATGGCACGACCATCAACGTCGCGAATCTCTCAGGCAATTACAGCAAGAGAAGTTGTTGCTCCAATTGA MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKADLNHLRAVSAEDAQLLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEATSNPGLPHGTTINVANLSGNYSKRSCCSN Homology
BLAST of Pay0021588.1 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 4.8e-101 Identity = 189/216 (87.50%), Postives = 202/216 (93.52%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 4.8e-101 Identity = 194/216 (89.81%), Postives = 202/216 (93.52%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.4e-97 Identity = 185/216 (85.65%), Postives = 197/216 (91.20%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4) HSP 1 Score: 354.0 bits (907), Expect = 1.2e-96 Identity = 186/218 (85.32%), Postives = 199/218 (91.28%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy Swiss-Prot
Match: Q9FIF9 (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.1e-96 Identity = 185/217 (85.25%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy TrEMBL
Match: A0A5D3DL31 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001070 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 3.5e-115 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy TrEMBL
Match: A0A1S3B3E1 (ras-related protein Rab2BV OS=Cucumis melo OX=3656 GN=LOC103485535 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 3.5e-115 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy TrEMBL
Match: A0A0A0KBH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008830 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.0e-114 Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy TrEMBL
Match: A0A6J1C222 (ras-related protein Rab2BV-like OS=Momordica charantia OX=3673 GN=LOC111006701 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.3e-113 Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Pay0021588.1 vs. ExPASy TrEMBL
Match: A0A6J1FEC9 (ras-related protein Rab2BV-like OS=Cucurbita moschata OX=3662 GN=LOC111444743 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 5.6e-113 Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Pay0021588.1 vs. NCBI nr
Match: XP_008441408.1 (PREDICTED: ras-related protein Rab2BV [Cucumis melo] >KAA0041459.1 ras-related protein Rab2BV [Cucumis melo var. makuwa] >TYK24333.1 ras-related protein Rab2BV [Cucumis melo var. makuwa]) HSP 1 Score: 424.1 bits (1089), Expect = 7.3e-115 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Pay0021588.1 vs. NCBI nr
Match: XP_004138445.1 (ras-related protein Rab2BV [Cucumis sativus] >KGN45752.1 hypothetical protein Csa_005266 [Cucumis sativus]) HSP 1 Score: 421.0 bits (1081), Expect = 6.2e-114 Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Pay0021588.1 vs. NCBI nr
Match: XP_038884346.1 (ras-related protein Rab2BV-like [Benincasa hispida]) HSP 1 Score: 417.5 bits (1072), Expect = 6.8e-113 Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Pay0021588.1 vs. NCBI nr
Match: XP_022134462.1 (ras-related protein Rab2BV-like [Momordica charantia] >XP_022134463.1 ras-related protein Rab2BV-like [Momordica charantia]) HSP 1 Score: 417.5 bits (1072), Expect = 6.8e-113 Identity = 212/216 (98.15%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Pay0021588.1 vs. NCBI nr
Match: XP_022938534.1 (ras-related protein Rab2BV-like [Cucurbita moschata] >XP_022938535.1 ras-related protein Rab2BV-like [Cucurbita moschata] >XP_023549819.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >XP_023549820.1 ras-related protein Rab2BV-like [Cucurbita pepo subsp. pepo] >KAG6578429.1 Ras-related protein Rab2BV, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015992.1 Ras-related protein Rab2BV [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112 Identity = 211/216 (97.69%), Postives = 214/216 (99.07%), Query Frame = 0
BLAST of Pay0021588.1 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C ) HSP 1 Score: 354.0 bits (907), Expect = 8.6e-98 Identity = 186/218 (85.32%), Postives = 199/218 (91.28%), Query Frame = 0
BLAST of Pay0021588.1 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D ) HSP 1 Score: 353.2 bits (905), Expect = 1.5e-97 Identity = 185/217 (85.25%), Postives = 197/217 (90.78%), Query Frame = 0
BLAST of Pay0021588.1 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B ) HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96 Identity = 182/216 (84.26%), Postives = 197/216 (91.20%), Query Frame = 0
BLAST of Pay0021588.1 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C ) HSP 1 Score: 332.4 bits (851), Expect = 2.7e-91 Identity = 165/216 (76.39%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Pay0021588.1 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F ) HSP 1 Score: 289.7 bits (740), Expect = 2.0e-78 Identity = 148/217 (68.20%), Postives = 172/217 (79.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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